Homology
BLAST of HG10004261 vs. NCBI nr
Match:
XP_038885361.1 (pentatricopeptide repeat-containing protein At5g65560 [Benincasa hispida])
HSP 1 Score: 1478.0 bits (3825), Expect = 0.0e+00
Identity = 726/777 (93.44%), Postives = 752/777 (96.78%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFTAVRCP MIRNS AIINSGQLLVV+ FRLRLTFALT KFFTSTASLPQSLSVEHD
Sbjct: 13 MHGVFTAVRCPIMIRNSAAIINSGQLLVVIEFRLRLTFALTPKFFTSTASLPQSLSVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
I AQLFSILSRPNWQK PSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 ISAQLFSILSRPNWQKQPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
N+QSY+SMLNILVPNGY H+AEKMRILMIKS DSSENALF+LE+LRSMNRRGD+FKFKL+
Sbjct: 133 NIQSYISMLNILVPNGYHHVAEKMRILMIKSTDSSENALFLLEILRSMNRRGDNFKFKLT 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGRVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ FLSMPSKGCRRNEVSYTNLIHGFCEAR
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAYKTFLSMPSKGCRRNEVSYTNLIHGFCEAR 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
RIDEAL+LFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMT+KGCEPNVHTYT
Sbjct: 313 RIDEALKLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTEKGCEPNVHTYT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLIH LCEDNNFDDAKKMLNGM+EKGL+P+VVTYNALIDGYCKKGLSMSALEILSLMESN
Sbjct: 373 VLIHRLCEDNNFDDAKKMLNGMLEKGLIPSVVTYNALIDGYCKKGLSMSALEILSLMESN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKNIHKAMS+LHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA
Sbjct: 433 NCSPNARTYNELILGFCRAKNIHKAMSILHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTYSVF+DTLCK G+VEEA SLFDSLKEKGIK NEVIYSTLIDG
Sbjct: 493 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGQVEEAHSLFDSLKEKGIKANEVIYSTLIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDGHSLLDKM+SAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDI PA
Sbjct: 553 YCKVGKVSDGHSLLDKMVSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDIMPA 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILIENLLK+GEFDRAH+MFDQMLSTGSHPDVFIYTAF+HAYCSQGRLKDAEVLIY
Sbjct: 613 ADTYTILIENLLKNGEFDRAHDMFDQMLSTGSHPDVFIYTAFVHAYCSQGRLKDAEVLIY 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMNEKGILPDTLLY+LLID YGRFGSIDGAFD LKRM+DVGCEPSYYTYSYLIKHLSN+K
Sbjct: 673 KMNEKGILPDTLLYSLLIDAYGRFGSIDGAFDTLKRMNDVGCEPSYYTYSYLIKHLSNSK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV SS ELS+LSSGVASNDF FWRRVDYEFALELFGKM KHGCAPNANTYGKF+
Sbjct: 733 PKEVISSLELSELSSGVASNDFSNFWRRVDYEFALELFGKMFKHGCAPNANTYGKFI 789
BLAST of HG10004261 vs. NCBI nr
Match:
KAA0038446.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 702/777 (90.35%), Postives = 735/777 (94.59%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAI SGQLLVVLGFRLRLTF LT +FFTSTAS PQSLSVEHD
Sbjct: 1 MHGVFTPVRCPTMIRNSTAIFKSGQLLVVLGFRLRLTFPLTHRFFTSTASFPQSLSVEHD 60
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLF+ILSRPNWQKHPSLKNLIPSI+ SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 61 IPAQLFTILSRPNWQKHPSLKNLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFKH 120
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSYVSMLNILVPNGYL IAE MRILMIKS DSSENA+FVLEMLRSMNRR D FKFKLS
Sbjct: 121 NVQSYVSMLNILVPNGYLRIAENMRILMIKSTDSSENAVFVLEMLRSMNRRVDAFKFKLS 180
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 240
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGCRRNEVSYTNLIHGFCEAR
Sbjct: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCRRNEVSYTNLIHGFCEAR 300
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+ EAL+LFSQMHEDNCWPTVRTYT++I ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 301 RVGEALKLFSQMHEDNCWPTVRTYTVLIFALCQLGRKTEALNMFKEMTEKRCQPNVHTYT 360
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 361 VLICSLCEDGNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 420
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 480
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTY VF+DTLCK G VEEARSLF+SLKEKGIK NEV+YSTLIDG
Sbjct: 481 YKLLSLMNESGLVPDEWTYGVFIDTLCKRGLVEEARSLFESLKEKGIKANEVMYSTLIDG 540
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLVE+MIKRDI PA
Sbjct: 541 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVEVMIKRDIQPA 600
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKDGE D AH++FDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLI
Sbjct: 601 ADTYTILIDNLLKDGEIDHAHDVFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIC 660
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMHDVGCEPSY+TYSYLIKHLSNAK
Sbjct: 661 KMNAKGIMPDTILYTLFIDAYGRFGSIDGAFGILKRMHDVGCEPSYHTYSYLIKHLSNAK 720
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF LELFGKMV+HGCAPNANTYGKF+
Sbjct: 721 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLELFGKMVEHGCAPNANTYGKFI 777
BLAST of HG10004261 vs. NCBI nr
Match:
XP_016903268.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g65560 [Cucumis melo])
HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 702/777 (90.35%), Postives = 734/777 (94.47%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAI SGQLLVVLGFRLRLTF LT +FFTSTAS PQSLSVEHD
Sbjct: 13 MHGVFTPVRCPTMIRNSTAIFKSGQLLVVLGFRLRLTFPLTHRFFTSTASFPQSLSVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLF+ILSRPNWQKHPSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 IPAQLFTILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSYVSMLNILVPNGYL IAE MRILMIKS DSSENA+FVLEMLRSMNRR D FKFKLS
Sbjct: 133 NVQSYVSMLNILVPNGYLRIAENMRILMIKSTDSSENAVFVLEMLRSMNRRVDAFKFKLS 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGCRRNEVSYTNLIHGFCEAR
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCRRNEVSYTNLIHGFCEAR 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+ EAL+LFSQMHEDNCWPTVRTYT++I ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 313 RVGEALKLFSQMHEDNCWPTVRTYTVLIFALCQLGRKTEALNMFKEMTEKRCQPNVHTYT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 373 VLICSLCEDGNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 433 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTY VF+DTLCK G VEEA SLF+SLKEKGIK NEV+YSTLIDG
Sbjct: 493 YKLLSLMNESGLVPDEWTYGVFIDTLCKRGLVEEACSLFESLKEKGIKANEVMYSTLIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLVE+MIKRDI PA
Sbjct: 553 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVEVMIKRDIQPA 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKDGE D AH++FDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLI
Sbjct: 613 ADTYTILIDNLLKDGEIDHAHDVFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIC 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMHDVGCEPSY+TYSYLIKHLSNAK
Sbjct: 673 KMNAKGIMPDTILYTLFIDAYGRFGSIDGAFGILKRMHDVGCEPSYHTYSYLIKHLSNAK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF LELFGKMV+HGCAPNANTYGKF+
Sbjct: 733 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLELFGKMVEHGCAPNANTYGKFI 789
BLAST of HG10004261 vs. NCBI nr
Match:
XP_023545913.1 (pentatricopeptide repeat-containing protein At5g65560-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1420.6 bits (3676), Expect = 0.0e+00
Identity = 702/777 (90.35%), Postives = 734/777 (94.47%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFTAVRCPTMIRNS IINSGQLL+V GFRLR TF+LT KFFTSTASLPQ+L VEHD
Sbjct: 13 MHGVFTAVRCPTMIRNSAVIINSGQLLIVHGFRLRFTFSLTFKFFTSTASLPQNLPVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
I AQLFSILSRPNWQKHPSLK LIPSI+ SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 ISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSYVS++NILVPNGYLHIAEKMRILMIKS DS ENALFVLEMLRSMNRRGDDFKFKL+
Sbjct: 133 NVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLEMLRSMNRRGDDFKFKLT 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLML+SRFLMIDEMKSVYLEMLDDMVTPNIYT NTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLMSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVD A+ IFLSMPSKGCRRNEVSYTN+I+GFCEAR
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCEAR 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
RIDEAL+LF QMHEDNC PTVRTYTI+I A+CQLGRKTEAF+MFKEMT+KG EPNV+T+T
Sbjct: 313 RIDEALKLFLQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFKEMTEKGSEPNVYTWT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLIHSLCEDNNFDDAKKMLNGM+EKGLVP++VTYNALIDGYCKKG+SMSALEILSLME N
Sbjct: 373 VLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLMELN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKN+HKAMSLL++MLERKLQPDVVTYNLLIHGQCKEGHL SA
Sbjct: 433 NCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTYSVFVDTLCK +VEEAR LFDSLK KGIK NEVIYS LIDG
Sbjct: 493 YKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSALIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDGHSLLDKMLS G VPNS TYNSLIDGYCKEKN+QEALLL+EIMIKR I PA
Sbjct: 553 YCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMIKRGIKPA 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
DTYTI IENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY
Sbjct: 613 VDTYTIFIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMNEKGILPDTLL+TLLID YGRFGSID AFDILK MHDVGCEPS+YTYSYLIKHLSN K
Sbjct: 673 KMNEKGILPDTLLHTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLSNEK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
KEVNS+SELSDLSSGVASNDF FWRRVDYEFALELFGKMVKHGCAPNANTY KF+
Sbjct: 733 LKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFI 789
BLAST of HG10004261 vs. NCBI nr
Match:
KAE8647207.1 (hypothetical protein Csa_018997 [Cucumis sativus])
HSP 1 Score: 1420.2 bits (3675), Expect = 0.0e+00
Identity = 701/777 (90.22%), Postives = 735/777 (94.59%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAII SGQLLVVLGFRLRLTF++T +FFTS ASLPQS SVEHD
Sbjct: 1 MHGVFTPVRCPTMIRNSTAIIKSGQLLVVLGFRLRLTFSITHRFFTSPASLPQSFSVEHD 60
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLFSILSRPNWQKHPSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 120
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQS+VSMLNILVPNGYL IAE MRILMIKS DSSENALFVLEMLRSMNRR D FKFKL+
Sbjct: 121 NVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLT 180
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 240
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGC RNEVSYTNLIHGFCEAR
Sbjct: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 300
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+DEAL+LFSQMHEDNCWPTVRTYT+II ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 301 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 360
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED+NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 361 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 420
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCR KNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 421 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 480
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTYSVF+DTLCK G VEEARSLF+SLKEKGIK NEVIYSTLIDG
Sbjct: 481 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 540
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLV+IMIKRDI PA
Sbjct: 541 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 600
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKD EFD+AH+MFDQMLSTGSHPDVFIYTAFIHAYCS GRLKDAEVLI
Sbjct: 601 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 660
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMH+VGCEPSYYTYS LIKHLSNAK
Sbjct: 661 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 720
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF L+LFGKM +HGCAPNANTYGKF+
Sbjct: 721 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 777
BLAST of HG10004261 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 816.2 bits (2107), Expect = 3.1e-235
Identity = 399/730 (54.66%), Postives = 526/730 (72.05%), Query Frame = 0
Query: 50 SLPQSLSVEHDIPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFF 109
+LP+ S +P +L SILS+PNW K PSLK+++ +I+ SH+S+LF+L+L P+TAL F
Sbjct: 51 NLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFS 110
Query: 110 NWIGQKHGFKHNVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMN 169
+WI Q +KH+V SY S+L +L+ NGY+ + K+R+LMIKS DS +AL+VL++ R MN
Sbjct: 111 HWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMN 170
Query: 170 R-RGDDFKFKLSLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCK 229
+ + K+KL + CYN LL L+RF ++DEMK VY+EML+D V PNIYT N MVNGYCK
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 230 LGCVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVS 289
LG V EA YVSKIV+AGL D FTYTSLI+GYC+ K++D+A +F MP KGCRRNEV+
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 290 YTNLIHGFCEARRIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMT 349
YT+LIHG C ARRIDEA+ LF +M +D C+PTVRTYT++I +LC RK+EA N+ KEM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 350 DKGCEPNVHTYTVLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSM 409
+ G +PN+HTYTVLI SLC F+ A+++L M+EKGL+P V+TYNALI+GYCK+G+
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 410 SALEILSLMESNNCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLI 469
A++++ LMES SPN RTYNELI G+C++ N+HKAM +L+KMLERK+ PDVVTYN LI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLI 470
Query: 470 HGQCKEGHLGSAYKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIK 529
GQC+ G+ SAY+LLSLMN+ GLVPD+WTY+ +D+LCKS RVEEA LFDSL++KG+
Sbjct: 471 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 530
Query: 530 TNEVIYSTLIDGYCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLL 589
N V+Y+ LIDGYCK GKV + H +L+KMLS C+PNS+T+N+LI G C + +EA LL
Sbjct: 531 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 590
Query: 590 VEIMIKRDITPAADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCS 649
E M+K + P T TILI LLKDG+FD A++ F QMLS+G+ PD YT FI YC
Sbjct: 591 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 650
Query: 650 QGRLKDAEVLIYKMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYT 709
+GRL DAE ++ KM E G+ PD Y+ LI YG G + AFD+LKRM D GCEPS +T
Sbjct: 651 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 710
Query: 710 YSYLIKHLSNAK-PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCA 769
+ LIKHL K K+ S EL C ++++ +EL KMV+H
Sbjct: 711 FLSLIKHLLEMKYGKQKGSEPEL------------CAMSNMMEFDTVVELLEKMVEHSVT 767
Query: 770 PNANTYGKFL 778
PNA +Y K +
Sbjct: 771 PNAKSYEKLI 767
BLAST of HG10004261 vs. ExPASy Swiss-Prot
Match:
Q9SFV9 (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g07290 PE=2 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 5.5e-123
Identity = 246/696 (35.34%), Postives = 393/696 (56.47%), Query Frame = 0
Query: 45 FTSTASLPQSLSVEHDIPAQLFSILSRPNWQKHPSLKNLI----PSIATSHISALFALNL 104
F S +S P S + + S+L PNW+K+ SLK+L+ P++A+ IS + N
Sbjct: 25 FFSVSSRPSLSSSDEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDN- 84
Query: 105 HPQTALAFFNWIGQKHGFKHNVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALF 164
+ FF W+ + + + +L ++V +G +A + + +IK E +
Sbjct: 85 --DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEM- 144
Query: 165 VLEMLRSMNRRGDDFKFKLSLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLN 224
L+++ + + F F+L+ CY+ LLM L++ + Y M D +
Sbjct: 145 -LKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYR 204
Query: 225 TMVNGYCKLGCVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSK 284
T+VN CK G AE+++SKI++ G LD+ TSL+LG+CR N+ A +F M +
Sbjct: 205 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 264
Query: 285 -GCRRNEVSYTNLIHGFCEARRIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTE 344
C N VSY+ LIHG CE R++EA L QM E C P+ RTYT++I ALC G +
Sbjct: 265 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 324
Query: 345 AFNMFKEMTDKGCEPNVHTYTVLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALID 404
AFN+F EM +GC+PNVHTYTVLI LC D ++A + MV+ + P+V+TYNALI+
Sbjct: 325 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 384
Query: 405 GYCKKGLSMSALEILSLMESNNCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP 464
GYCK G + A E+L++ME C PN RT+NEL+ G CR +KA+ LL +ML+ L P
Sbjct: 385 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 444
Query: 465 DVVTYNLLIHGQCKEGHLGSAYKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLF 524
D+V+YN+LI G C+EGH+ +AYKLLS MN + PD T++ ++ CK G+ + A +
Sbjct: 445 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 504
Query: 525 DSLKEKGIKTNEVIYSTLIDGYCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKE 584
+ KGI +EV +TLIDG CKVGK D +L+ ++ + + N ++D K
Sbjct: 505 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 564
Query: 585 KNFQEALLLVEIMIKRDITPAADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIY 644
+E L ++ + K + P+ TYT L++ L++ G+ + + + M +G P+V+ Y
Sbjct: 565 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 624
Query: 645 TAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHD 704
T I+ C GR+++AE L+ M + G+ P+ + YT+++ Y G +D A + ++ M +
Sbjct: 625 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 684
Query: 705 VGCEPSYYTYSYLIK-HLSNAKPKEVNSSSELSDLS 735
G E + YS L++ + + K + + S +SD++
Sbjct: 685 RGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
BLAST of HG10004261 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 2.1e-77
Identity = 166/537 (30.91%), Postives = 274/537 (51.02%), Query Frame = 0
Query: 184 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVSKIV 243
+N L ++R D + M + + ++YT+ M+N YC+ ++ A + +
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 244 QAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARRID 303
+ G DT T+++L+ G+C V A + M R + V+ + LI+G C R+
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 304 EALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLI 363
EAL L +M E P TY ++ LC+ G A ++F++M ++ + +V Y+++I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 364 HSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCS 423
SLC+D +FDDA + N M KG+ VVTY++LI G C G ++L M N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 424 PNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKL 483
P+ T++ LI F + + +A L ++M+ R + PD +TYN LI G CKE L A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 484 LSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDGYCK 543
LM G PD TYS+ +++ CK+ RV++ LF + KG+ N + Y+TL+ G+C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 544 VGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPAADT 603
GK++ L +M+S G P+ +TY L+DG C +AL + E M K +T
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 604 YTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMN 663
Y I+I + + D A ++F + G PDV Y I C +G L +A++L KM
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 664 EKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 721
E G PD Y +LI + + + ++++ M G T +I LS+ +
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
BLAST of HG10004261 vs. ExPASy Swiss-Prot
Match:
Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 6.0e-77
Identity = 162/527 (30.74%), Postives = 280/527 (53.13%), Query Frame = 0
Query: 191 LSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS---KIVQAGL 250
LS + +D+ ++ +M+ P+I N +++ K+ + EL +S ++ G+
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGI 117
Query: 251 SLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARRIDEALQ 310
S D +TY+ I +CR + A + M G + V+ ++L++G+C ++RI +A+
Sbjct: 118 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 177
Query: 311 LFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLIHSLC 370
L QM E P T+T +I L + +EA + +M +GC+P++ TY +++ LC
Sbjct: 178 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 237
Query: 371 EDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCSPNAR 430
+ + D A +L M + + VV YN +IDG CK AL + + M++ P+
Sbjct: 238 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 297
Query: 431 TYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKLLSLM 490
TY+ LI C A LL M+ERK+ P+VVT++ LI KEG L A KL M
Sbjct: 298 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 357
Query: 491 NESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDGYCKVGKV 550
+ + PD +TYS ++ C R++EA+ +F+ + K N V YSTLI G+CK +V
Sbjct: 358 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 417
Query: 551 SDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPAADTYTIL 610
+G L +M G V N++TY +LI G+ + ++ A ++ + M+ + P TY IL
Sbjct: 418 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 477
Query: 611 IENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGI 670
++ L K+G+ +A +F+ + + PD++ Y I C G+++D L ++ KG+
Sbjct: 478 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 537
Query: 671 LPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIK 715
P+ + Y +I + R GS + A +LK+M + G P+ TY+ LI+
Sbjct: 538 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
BLAST of HG10004261 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 1.0e-76
Identity = 159/471 (33.76%), Postives = 249/471 (52.87%), Query Frame = 0
Query: 257 LILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARR-IDEALQLFSQMHED 316
++ Y R +D A +I + G +SY ++ ++R I A +F +M E
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 317 NCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLIHSLCEDNNFDDA 376
P V TY I+I C G A +F +M KGC PNV TY LI C+ DD
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 377 KKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCSPNARTYNELILG 436
K+L M KGL P +++YN +I+G C++G +L+ M S + TYN LI G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 437 FCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKLLSLMNESGLVPD 496
+C+ N H+A+ + +ML L P V+TY LIH CK G++ A + L M GL P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 497 EWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDGYCKVGKVSDGHSLLD 556
E TY+ VD + G + EA + + + G + V Y+ LI+G+C GK+ D ++L+
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 557 KMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPAADTYTILIENLLKDG 616
M G P+ ++Y++++ G+C+ + EAL + M+++ I P TY+ LI+ +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 617 EFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYT 676
A +++++ML G PD F YTA I+AYC +G L+ A L +M EKG+LPD + Y+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 677 LLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAKPKEVNS 727
+LI+ + A +L ++ PS TY LI++ SN + K V S
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
BLAST of HG10004261 vs. ExPASy TrEMBL
Match:
A0A5A7T899 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00120 PE=4 SV=1)
HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 702/777 (90.35%), Postives = 735/777 (94.59%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAI SGQLLVVLGFRLRLTF LT +FFTSTAS PQSLSVEHD
Sbjct: 1 MHGVFTPVRCPTMIRNSTAIFKSGQLLVVLGFRLRLTFPLTHRFFTSTASFPQSLSVEHD 60
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLF+ILSRPNWQKHPSLKNLIPSI+ SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 61 IPAQLFTILSRPNWQKHPSLKNLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFKH 120
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSYVSMLNILVPNGYL IAE MRILMIKS DSSENA+FVLEMLRSMNRR D FKFKLS
Sbjct: 121 NVQSYVSMLNILVPNGYLRIAENMRILMIKSTDSSENAVFVLEMLRSMNRRVDAFKFKLS 180
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 240
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGCRRNEVSYTNLIHGFCEAR
Sbjct: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCRRNEVSYTNLIHGFCEAR 300
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+ EAL+LFSQMHEDNCWPTVRTYT++I ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 301 RVGEALKLFSQMHEDNCWPTVRTYTVLIFALCQLGRKTEALNMFKEMTEKRCQPNVHTYT 360
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 361 VLICSLCEDGNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 420
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 480
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTY VF+DTLCK G VEEARSLF+SLKEKGIK NEV+YSTLIDG
Sbjct: 481 YKLLSLMNESGLVPDEWTYGVFIDTLCKRGLVEEARSLFESLKEKGIKANEVMYSTLIDG 540
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLVE+MIKRDI PA
Sbjct: 541 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVEVMIKRDIQPA 600
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKDGE D AH++FDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLI
Sbjct: 601 ADTYTILIDNLLKDGEIDHAHDVFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIC 660
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMHDVGCEPSY+TYSYLIKHLSNAK
Sbjct: 661 KMNAKGIMPDTILYTLFIDAYGRFGSIDGAFGILKRMHDVGCEPSYHTYSYLIKHLSNAK 720
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF LELFGKMV+HGCAPNANTYGKF+
Sbjct: 721 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLELFGKMVEHGCAPNANTYGKFI 777
BLAST of HG10004261 vs. ExPASy TrEMBL
Match:
A0A1S4E4V7 (pentatricopeptide repeat-containing protein At5g65560 OS=Cucumis melo OX=3656 GN=LOC107990278 PE=4 SV=1)
HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 702/777 (90.35%), Postives = 734/777 (94.47%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAI SGQLLVVLGFRLRLTF LT +FFTSTAS PQSLSVEHD
Sbjct: 13 MHGVFTPVRCPTMIRNSTAIFKSGQLLVVLGFRLRLTFPLTHRFFTSTASFPQSLSVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLF+ILSRPNWQKHPSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 IPAQLFTILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSYVSMLNILVPNGYL IAE MRILMIKS DSSENA+FVLEMLRSMNRR D FKFKLS
Sbjct: 133 NVQSYVSMLNILVPNGYLRIAENMRILMIKSTDSSENAVFVLEMLRSMNRRVDAFKFKLS 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGCRRNEVSYTNLIHGFCEAR
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCRRNEVSYTNLIHGFCEAR 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+ EAL+LFSQMHEDNCWPTVRTYT++I ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 313 RVGEALKLFSQMHEDNCWPTVRTYTVLIFALCQLGRKTEALNMFKEMTEKRCQPNVHTYT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 373 VLICSLCEDGNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 433 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTY VF+DTLCK G VEEA SLF+SLKEKGIK NEV+YSTLIDG
Sbjct: 493 YKLLSLMNESGLVPDEWTYGVFIDTLCKRGLVEEACSLFESLKEKGIKANEVMYSTLIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLVE+MIKRDI PA
Sbjct: 553 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVEVMIKRDIQPA 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKDGE D AH++FDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLI
Sbjct: 613 ADTYTILIDNLLKDGEIDHAHDVFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIC 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMHDVGCEPSY+TYSYLIKHLSNAK
Sbjct: 673 KMNAKGIMPDTILYTLFIDAYGRFGSIDGAFGILKRMHDVGCEPSYHTYSYLIKHLSNAK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF LELFGKMV+HGCAPNANTYGKF+
Sbjct: 733 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLELFGKMVEHGCAPNANTYGKFI 789
BLAST of HG10004261 vs. ExPASy TrEMBL
Match:
A0A0A0KFF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355970 PE=4 SV=1)
HSP 1 Score: 1420.2 bits (3675), Expect = 0.0e+00
Identity = 701/777 (90.22%), Postives = 735/777 (94.59%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGVFT VRCPTMIRNSTAII SGQLLVVLGFRLRLTF++T +FFTS ASLPQS SVEHD
Sbjct: 13 MHGVFTPVRCPTMIRNSTAIIKSGQLLVVLGFRLRLTFSITHRFFTSPASLPQSFSVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
IPAQLFSILSRPNWQKHPSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 IPAQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQS+VSMLNILVPNGYL IAE MRILMIKS DSSENALFVLEMLRSMNRR D FKFKL+
Sbjct: 133 NVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLT 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI+TLNTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVDAA+ IFLSMP+KGC RNEVSYTNLIHGFCEAR
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R+DEAL+LFSQMHEDNCWPTVRTYT+II ALCQLGRKTEA NMFKEMT+K C+PNVHTYT
Sbjct: 313 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLI SLCED+NFDDAKK+LNGM+EKGL+P+VVTYNALIDGYCKKGLS SALEILSLMESN
Sbjct: 373 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFCR KNIHKAMSLLHKMLERKLQP+VVTYN+LIHGQCKEG LGSA
Sbjct: 433 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLLSLMNESGLVPDEWTYSVF+DTLCK G VEEARSLF+SLKEKGIK NEVIYSTLIDG
Sbjct: 493 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKVSDG LLDKMLSAGCVPNSITYNSLIDGYCKEKNF+EA LLV+IMIKRDI PA
Sbjct: 553 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILI+NLLKD EFD+AH+MFDQMLSTGSHPDVFIYTAFIHAYCS GRLKDAEVLI
Sbjct: 613 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMN KGI+PDT+LYTL ID YGRFGSIDGAF ILKRMH+VGCEPSYYTYS LIKHLSNAK
Sbjct: 673 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
PKEV+SSSELSDLSSGVASNDF WRRVDYEF L+LFGKM +HGCAPNANTYGKF+
Sbjct: 733 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 789
BLAST of HG10004261 vs. ExPASy TrEMBL
Match:
A0A6J1DI13 (pentatricopeptide repeat-containing protein At5g65560 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020685 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 690/777 (88.80%), Postives = 730/777 (93.95%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTSTASLPQSLSVEHD 60
MHGV TAVRC TMIR TAIINSGQL +VLGFRLRLTF L LKFFTSTASLPQSL VEHD
Sbjct: 13 MHGVLTAVRCRTMIRYPTAIINSGQLFIVLGFRLRLTFTLNLKFFTSTASLPQSLPVEHD 72
Query: 61 IPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFKH 120
I AQLFSILSRPNWQKHPSLKNLIPSIA SHISALFALNL PQTALAFFNWIGQKHGFKH
Sbjct: 73 ISAQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKH 132
Query: 121 NVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKLS 180
NVQSY SMLNILVPNGYL IAEKMRILMIKS DSSENALFVLEMLRSMNRRGDDFKFKL+
Sbjct: 133 NVQSYTSMLNILVPNGYLRIAEKMRILMIKSTDSSENALFVLEMLRSMNRRGDDFKFKLT 192
Query: 181 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS 240
LRCYNMLLMLLSRFL++DEM+SVYLEMLDDMVTPNIYTLNTMVNGYCKLG VVEAELYVS
Sbjct: 193 LRCYNMLLMLLSRFLLVDEMRSVYLEMLDDMVTPNIYTLNTMVNGYCKLGNVVEAELYVS 252
Query: 241 KIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEAR 300
KIVQAGLSLDTFTYTSLILGYCRNKNVD A+ IFLSMP+KGCRRNEVSYTNLIHGFC+A+
Sbjct: 253 KIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPNKGCRRNEVSYTNLIHGFCDAK 312
Query: 301 RIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYT 360
R DEAL+LFSQMHEDNCWPTVRTYT+IICALCQLGRK+EAFN FKEMT+KGCEPNVHTYT
Sbjct: 313 RTDEALKLFSQMHEDNCWPTVRTYTVIICALCQLGRKSEAFNTFKEMTEKGCEPNVHTYT 372
Query: 361 VLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESN 420
VLIHSLCEDNNFDDAK MLNGM++KGLVP+VVTYNALIDGYCKKG+S+SALEILSLMESN
Sbjct: 373 VLIHSLCEDNNFDDAKNMLNGMLQKGLVPSVVTYNALIDGYCKKGMSLSALEILSLMESN 432
Query: 421 NCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSA 480
NCSPNARTYNELILGFC+AKN+HKAMSLLHKMLERKLQPDVVTYNLLIHGQCK+GHLGSA
Sbjct: 433 NCSPNARTYNELILGFCKAKNVHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKDGHLGSA 492
Query: 481 YKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDG 540
YKLL LMNESGLVPDEWTYSVFVDTLCK G+VEEAR LFDSLKEKGI+ NEVIYS LIDG
Sbjct: 493 YKLLGLMNESGLVPDEWTYSVFVDTLCKRGQVEEARFLFDSLKEKGIRANEVIYSALIDG 552
Query: 541 YCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPA 600
YCKVGKV+DGHSL DKM GCVPNSITYNSLIDGYC+EKNFQEALLL+EIMIKRDI P
Sbjct: 553 YCKVGKVTDGHSLFDKMHGDGCVPNSITYNSLIDGYCREKNFQEALLLLEIMIKRDIKPT 612
Query: 601 ADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIY 660
ADTYTILIE+LLKDGEFDRAHNMFDQMLSTGS PDVF YTAFIHAYCSQGRLKDAE+ IY
Sbjct: 613 ADTYTILIESLLKDGEFDRAHNMFDQMLSTGSRPDVFTYTAFIHAYCSQGRLKDAELFIY 672
Query: 661 KMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 720
KMNEKGI+PDTLLYTLLID YG+FGSI AFDILKRM+DVGCEPS++TYSYLIKHLSN+K
Sbjct: 673 KMNEKGIMPDTLLYTLLIDAYGQFGSIGRAFDILKRMYDVGCEPSFHTYSYLIKHLSNSK 732
Query: 721 PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFL 778
+V+SS EL+DLSSGV SNDF WR+VDYEFAL+LF KMVKHGC PNANTY KF+
Sbjct: 733 SIKVDSSLELNDLSSGVTSNDFASLWRKVDYEFALDLFEKMVKHGCEPNANTYSKFI 789
BLAST of HG10004261 vs. ExPASy TrEMBL
Match:
A0A6J1KKQ2 (pentatricopeptide repeat-containing protein At5g65560-like OS=Cucurbita maxima OX=3661 GN=LOC111496590 PE=3 SV=1)
HSP 1 Score: 1364.0 bits (3529), Expect = 0.0e+00
Identity = 671/781 (85.92%), Postives = 719/781 (92.06%), Query Frame = 0
Query: 1 MHGVFTAVRCPTMIRNSTAIINSGQLLVVLGFRLRLTFALTLKFFTS-TASLPQSLSVEH 60
+HGVFTA+RCPTMIRNS+AIINSGQLL+VLGFRLR TF L LKFFTS TASLPQSL VEH
Sbjct: 13 VHGVFTAIRCPTMIRNSSAIINSGQLLIVLGFRLRFTFTLALKFFTSTTASLPQSLPVEH 72
Query: 61 DIPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFFNWIGQKHGFK 120
D+PAQLFSILSR +WQKHPSLK LIPSIA SH+S+LFALNL P+TALAFFNWI QKHGFK
Sbjct: 73 DVPAQLFSILSRLDWQKHPSLKILIPSIAPSHVSSLFALNLDPKTALAFFNWIEQKHGFK 132
Query: 121 HNVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMNRRGDDFKFKL 180
HNVQSYVS+LNILVPNGYL IAEK+RI MIKS +S+ENALFVLEMLRSMNRRGDD +FKL
Sbjct: 133 HNVQSYVSILNILVPNGYLRIAEKLRISMIKSTNSAENALFVLEMLRSMNRRGDDLRFKL 192
Query: 181 SLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYV 240
+L+ YNMLLMLLSRFLMIDEMK+VYLEMLDDMV+PN+YTLNTMVNGYCKLG VVEAELYV
Sbjct: 193 TLKSYNMLLMLLSRFLMIDEMKNVYLEMLDDMVSPNMYTLNTMVNGYCKLGNVVEAELYV 252
Query: 241 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEA 300
SKIVQ GL LDTFTYTSLILGYCRNKNVD A+ IFLSMPSKGCRRNEVSYTNLIHGFCEA
Sbjct: 253 SKIVQTGLCLDTFTYTSLILGYCRNKNVDGANKIFLSMPSKGCRRNEVSYTNLIHGFCEA 312
Query: 301 RRIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTY 360
RRIDEAL+L SQMHEDNCWPTVRTYT+IICALCQ+GRK+EAF++FKEMT+KGCEPNVHTY
Sbjct: 313 RRIDEALKLLSQMHEDNCWPTVRTYTVIICALCQMGRKSEAFDVFKEMTEKGCEPNVHTY 372
Query: 361 TVLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMES 420
TVLIHSLCEDN FDDAKK+L+GM+EKGLVP+VVTYNA IDGYCKKG+S SALEILSLME
Sbjct: 373 TVLIHSLCEDNKFDDAKKLLDGMLEKGLVPSVVTYNAFIDGYCKKGMSTSALEILSLMEL 432
Query: 421 NNCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGS 480
NNCSPN RTYNELI+GFCRAKN+HKAM LLHKMLE KLQPDVVTYNLLIHGQCKEGHLGS
Sbjct: 433 NNCSPNTRTYNELIMGFCRAKNVHKAMLLLHKMLELKLQPDVVTYNLLIHGQCKEGHLGS 492
Query: 481 AYKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLID 540
AYKLLSLMNE+GLVPDEWTYSVF+ LCK GRVEEAR LFDSLKEKGIK NEVIYS LID
Sbjct: 493 AYKLLSLMNENGLVPDEWTYSVFIVVLCKRGRVEEARFLFDSLKEKGIKANEVIYSALID 552
Query: 541 GYCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITP 600
GYCKV KVSDGHSLLDKMLS GCVPNSITYNSLIDG+CKEKNFQEALLLVEIMIKRDI P
Sbjct: 553 GYCKVEKVSDGHSLLDKMLSDGCVPNSITYNSLIDGHCKEKNFQEALLLVEIMIKRDIKP 612
Query: 601 AADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLI 660
ADTYTILI+NLLKDGEFDRAH MFDQMLS GSHPDV IYT FIHAYCS GRL+DAE+ +
Sbjct: 613 TADTYTILIKNLLKDGEFDRAHQMFDQMLSAGSHPDVVIYTVFIHAYCSLGRLQDAELFL 672
Query: 661 YKMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNA 720
+KMNEKGILPD LLY+LLID YG GSI+ AFDILKRMHDVGCEPS+YTYSYLIKHL +A
Sbjct: 673 HKMNEKGILPDALLYSLLIDAYGWSGSIEIAFDILKRMHDVGCEPSFYTYSYLIKHLLSA 732
Query: 721 KPKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCAPNANTYGKFLQV 780
K EVNSS+EL DLSSGV SNDF WRRVDYEFALELF MVK GCAPNANTYGKF+
Sbjct: 733 KLIEVNSSTELGDLSSGVVSNDFANLWRRVDYEFALELFEGMVKQGCAPNANTYGKFISG 792
BLAST of HG10004261 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 816.2 bits (2107), Expect = 2.2e-236
Identity = 399/730 (54.66%), Postives = 526/730 (72.05%), Query Frame = 0
Query: 50 SLPQSLSVEHDIPAQLFSILSRPNWQKHPSLKNLIPSIATSHISALFALNLHPQTALAFF 109
+LP+ S +P +L SILS+PNW K PSLK+++ +I+ SH+S+LF+L+L P+TAL F
Sbjct: 51 NLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFS 110
Query: 110 NWIGQKHGFKHNVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALFVLEMLRSMN 169
+WI Q +KH+V SY S+L +L+ NGY+ + K+R+LMIKS DS +AL+VL++ R MN
Sbjct: 111 HWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMN 170
Query: 170 R-RGDDFKFKLSLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCK 229
+ + K+KL + CYN LL L+RF ++DEMK VY+EML+D V PNIYT N MVNGYCK
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 230 LGCVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVS 289
LG V EA YVSKIV+AGL D FTYTSLI+GYC+ K++D+A +F MP KGCRRNEV+
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 290 YTNLIHGFCEARRIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMT 349
YT+LIHG C ARRIDEA+ LF +M +D C+PTVRTYT++I +LC RK+EA N+ KEM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 350 DKGCEPNVHTYTVLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSM 409
+ G +PN+HTYTVLI SLC F+ A+++L M+EKGL+P V+TYNALI+GYCK+G+
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 410 SALEILSLMESNNCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLI 469
A++++ LMES SPN RTYNELI G+C++ N+HKAM +L+KMLERK+ PDVVTYN LI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLI 470
Query: 470 HGQCKEGHLGSAYKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIK 529
GQC+ G+ SAY+LLSLMN+ GLVPD+WTY+ +D+LCKS RVEEA LFDSL++KG+
Sbjct: 471 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 530
Query: 530 TNEVIYSTLIDGYCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLL 589
N V+Y+ LIDGYCK GKV + H +L+KMLS C+PNS+T+N+LI G C + +EA LL
Sbjct: 531 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 590
Query: 590 VEIMIKRDITPAADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCS 649
E M+K + P T TILI LLKDG+FD A++ F QMLS+G+ PD YT FI YC
Sbjct: 591 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 650
Query: 650 QGRLKDAEVLIYKMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYT 709
+GRL DAE ++ KM E G+ PD Y+ LI YG G + AFD+LKRM D GCEPS +T
Sbjct: 651 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 710
Query: 710 YSYLIKHLSNAK-PKEVNSSSELSDLSSGVASNDFCKFWRRVDYEFALELFGKMVKHGCA 769
+ LIKHL K K+ S EL C ++++ +EL KMV+H
Sbjct: 711 FLSLIKHLLEMKYGKQKGSEPEL------------CAMSNMMEFDTVVELLEKMVEHSVT 767
Query: 770 PNANTYGKFL 778
PNA +Y K +
Sbjct: 771 PNAKSYEKLI 767
BLAST of HG10004261 vs. TAIR 10
Match:
AT3G07290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 443.4 bits (1139), Expect = 3.9e-124
Identity = 246/696 (35.34%), Postives = 393/696 (56.47%), Query Frame = 0
Query: 45 FTSTASLPQSLSVEHDIPAQLFSILSRPNWQKHPSLKNLI----PSIATSHISALFALNL 104
F S +S P S + + S+L PNW+K+ SLK+L+ P++A+ IS + N
Sbjct: 25 FFSVSSRPSLSSSDEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDN- 84
Query: 105 HPQTALAFFNWIGQKHGFKHNVQSYVSMLNILVPNGYLHIAEKMRILMIKSADSSENALF 164
+ FF W+ + + + +L ++V +G +A + + +IK E +
Sbjct: 85 --DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEM- 144
Query: 165 VLEMLRSMNRRGDDFKFKLSLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLN 224
L+++ + + F F+L+ CY+ LLM L++ + Y M D +
Sbjct: 145 -LKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYR 204
Query: 225 TMVNGYCKLGCVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSK 284
T+VN CK G AE+++SKI++ G LD+ TSL+LG+CR N+ A +F M +
Sbjct: 205 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 264
Query: 285 -GCRRNEVSYTNLIHGFCEARRIDEALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTE 344
C N VSY+ LIHG CE R++EA L QM E C P+ RTYT++I ALC G +
Sbjct: 265 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 324
Query: 345 AFNMFKEMTDKGCEPNVHTYTVLIHSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALID 404
AFN+F EM +GC+PNVHTYTVLI LC D ++A + MV+ + P+V+TYNALI+
Sbjct: 325 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 384
Query: 405 GYCKKGLSMSALEILSLMESNNCSPNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQP 464
GYCK G + A E+L++ME C PN RT+NEL+ G CR +KA+ LL +ML+ L P
Sbjct: 385 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 444
Query: 465 DVVTYNLLIHGQCKEGHLGSAYKLLSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLF 524
D+V+YN+LI G C+EGH+ +AYKLLS MN + PD T++ ++ CK G+ + A +
Sbjct: 445 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 504
Query: 525 DSLKEKGIKTNEVIYSTLIDGYCKVGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKE 584
+ KGI +EV +TLIDG CKVGK D +L+ ++ + + N ++D K
Sbjct: 505 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 564
Query: 585 KNFQEALLLVEIMIKRDITPAADTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIY 644
+E L ++ + K + P+ TYT L++ L++ G+ + + + M +G P+V+ Y
Sbjct: 565 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 624
Query: 645 TAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHD 704
T I+ C GR+++AE L+ M + G+ P+ + YT+++ Y G +D A + ++ M +
Sbjct: 625 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 684
Query: 705 VGCEPSYYTYSYLIK-HLSNAKPKEVNSSSELSDLS 735
G E + YS L++ + + K + + S +SD++
Sbjct: 685 RGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
BLAST of HG10004261 vs. TAIR 10
Match:
AT1G77340.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 411.0 bits (1055), Expect = 2.2e-114
Identity = 213/416 (51.20%), Postives = 279/416 (67.07%), Query Frame = 0
Query: 85 PSIATSHISALFALNLHPQTALAFFNWIGQKHGFKHNVQSYVSMLNILVPNGYLHIAEKM 144
P SH+S+LF+LNL PQTAL+F +WI + FKHNV SY S++ +L + K+
Sbjct: 23 PFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI 82
Query: 145 RILMIKSADSSENALFVLEMLRSMNRRGDDF--KFKLSLRCYNMLLMLLSRFLMIDEMKS 204
ILMIKS +S +ALFV++ R+M R+GD F K+KL+ +CYN LL L+RF +++EMK
Sbjct: 83 TILMIKSCNSVRDALFVVDFCRTM-RKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKR 142
Query: 205 VYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVSKIVQAGLSLDTFTYTSLILGYC 264
+Y EML+D+V+P+IYT NT+VNGYCKLG VVEA+ YV+ ++QAG D FTYTS I G+C
Sbjct: 143 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 202
Query: 265 RNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARRIDEALQLFSQMHEDNCWPTVR 324
R K VDAA +F M GC RNEVSYT LI+G EA++IDEAL L +M +DNC P VR
Sbjct: 203 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 262
Query: 325 TYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLIHSLCEDNNFDDAKKMLNGM 384
TYT++I ALC G+K+EA N+FK+M++ G +P+ YTVLI S C + D+A +L M
Sbjct: 263 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 322
Query: 385 VEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCSPNARTYNELILGFCRAKNI 444
+E GL+P V+TYNALI G+CK KN+
Sbjct: 323 LENGLMPNVITYNALIKGFCK------------------------------------KNV 382
Query: 445 HKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKLLSLMNESGLVPDEWT 499
HKAM LL KMLE+ L PD++TYN LI GQC G+L SAY+LLSLM ESGLVP++ T
Sbjct: 383 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
BLAST of HG10004261 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 292.0 bits (746), Expect = 1.5e-78
Identity = 166/537 (30.91%), Postives = 274/537 (51.02%), Query Frame = 0
Query: 184 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVSKIV 243
+N L ++R D + M + + ++YT+ M+N YC+ ++ A + +
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 244 QAGLSLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARRID 303
+ G DT T+++L+ G+C V A + M R + V+ + LI+G C R+
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 304 EALQLFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLI 363
EAL L +M E P TY ++ LC+ G A ++F++M ++ + +V Y+++I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 364 HSLCEDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCS 423
SLC+D +FDDA + N M KG+ VVTY++LI G C G ++L M N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 424 PNARTYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKL 483
P+ T++ LI F + + +A L ++M+ R + PD +TYN LI G CKE L A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 484 LSLMNESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDGYCK 543
LM G PD TYS+ +++ CK+ RV++ LF + KG+ N + Y+TL+ G+C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 544 VGKVSDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPAADT 603
GK++ L +M+S G P+ +TY L+DG C +AL + E M K +T
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 604 YTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMN 663
Y I+I + + D A ++F + G PDV Y I C +G L +A++L KM
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 664 EKGILPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIKHLSNAK 721
E G PD Y +LI + + + ++++ M G T +I LS+ +
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
BLAST of HG10004261 vs. TAIR 10
Match:
AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 290.4 bits (742), Expect = 4.3e-78
Identity = 162/527 (30.74%), Postives = 280/527 (53.13%), Query Frame = 0
Query: 191 LSRFLMIDEMKSVYLEMLDDMVTPNIYTLNTMVNGYCKLGCVVEAELYVS---KIVQAGL 250
LS + +D+ ++ +M+ P+I N +++ K+ + EL +S ++ G+
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGI 117
Query: 251 SLDTFTYTSLILGYCRNKNVDAAHTIFLSMPSKGCRRNEVSYTNLIHGFCEARRIDEALQ 310
S D +TY+ I +CR + A + M G + V+ ++L++G+C ++RI +A+
Sbjct: 118 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 177
Query: 311 LFSQMHEDNCWPTVRTYTIIICALCQLGRKTEAFNMFKEMTDKGCEPNVHTYTVLIHSLC 370
L QM E P T+T +I L + +EA + +M +GC+P++ TY +++ LC
Sbjct: 178 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 237
Query: 371 EDNNFDDAKKMLNGMVEKGLVPTVVTYNALIDGYCKKGLSMSALEILSLMESNNCSPNAR 430
+ + D A +L M + + VV YN +IDG CK AL + + M++ P+
Sbjct: 238 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 297
Query: 431 TYNELILGFCRAKNIHKAMSLLHKMLERKLQPDVVTYNLLIHGQCKEGHLGSAYKLLSLM 490
TY+ LI C A LL M+ERK+ P+VVT++ LI KEG L A KL M
Sbjct: 298 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 357
Query: 491 NESGLVPDEWTYSVFVDTLCKSGRVEEARSLFDSLKEKGIKTNEVIYSTLIDGYCKVGKV 550
+ + PD +TYS ++ C R++EA+ +F+ + K N V YSTLI G+CK +V
Sbjct: 358 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 417
Query: 551 SDGHSLLDKMLSAGCVPNSITYNSLIDGYCKEKNFQEALLLVEIMIKRDITPAADTYTIL 610
+G L +M G V N++TY +LI G+ + ++ A ++ + M+ + P TY IL
Sbjct: 418 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 477
Query: 611 IENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGI 670
++ L K+G+ +A +F+ + + PD++ Y I C G+++D L ++ KG+
Sbjct: 478 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 537
Query: 671 LPDTLLYTLLIDTYGRFGSIDGAFDILKRMHDVGCEPSYYTYSYLIK 715
P+ + Y +I + R GS + A +LK+M + G P+ TY+ LI+
Sbjct: 538 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038885361.1 | 0.0e+00 | 93.44 | pentatricopeptide repeat-containing protein At5g65560 [Benincasa hispida] | [more] |
KAA0038446.1 | 0.0e+00 | 90.35 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_016903268.1 | 0.0e+00 | 90.35 | PREDICTED: pentatricopeptide repeat-containing protein At5g65560 [Cucumis melo] | [more] |
XP_023545913.1 | 0.0e+00 | 90.35 | pentatricopeptide repeat-containing protein At5g65560-like isoform X1 [Cucurbita... | [more] |
KAE8647207.1 | 0.0e+00 | 90.22 | hypothetical protein Csa_018997 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q9LSL9 | 3.1e-235 | 54.66 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q9SFV9 | 5.5e-123 | 35.34 | Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidop... | [more] |
Q6NQ83 | 2.1e-77 | 30.91 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Q9LQ16 | 6.0e-77 | 30.74 | Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 1.0e-76 | 33.76 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T899 | 0.0e+00 | 90.35 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E4V7 | 0.0e+00 | 90.35 | pentatricopeptide repeat-containing protein At5g65560 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0KFF8 | 0.0e+00 | 90.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355970 PE=4 SV=1 | [more] |
A0A6J1DI13 | 0.0e+00 | 88.80 | pentatricopeptide repeat-containing protein At5g65560 isoform X1 OS=Momordica ch... | [more] |
A0A6J1KKQ2 | 0.0e+00 | 85.92 | pentatricopeptide repeat-containing protein At5g65560-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT5G65560.1 | 2.2e-236 | 54.66 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G07290.1 | 3.9e-124 | 35.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G77340.1 | 2.2e-114 | 51.20 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22470.1 | 1.5e-78 | 30.91 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62910.1 | 4.3e-78 | 30.74 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |