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HG10004239 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTGTTATTCTTCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCCTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCAGTCGTGGCGGGGATTGAGAAGGCGACGGCAACGATGGTAGCTGAATTTAGTGGAATTTCCAAAGAGAAAGTGGTCGGCGGCCACCGCGGTGGCAAGGTTGTTCATCCAGAGTGGCATCTCAACTACATGAGCAAAAGAAGAGTTCCCAATGGCCCAGATCCTATTCATAACCGGTACGATAATGTTTTTTTTTTTTTTTTTTTTAGAGTAATGATTAGGTGCAGCCACATCACTTTTTATTTTTACACACAAGTAAAAATTAAAAATAATTCATTTTTATATATATAAAAAAAAATAAGATTTTTAAAAATAGAAAAATAAGAGAAACTATTTACACAAAATAACAAAAATTTTATATAGTTGTAATAGATGTTGATAAAAGTCTATTAGAGTCTATCAATTATTGAAATTATAGAAGTCTATCACTGATAGATGCGATAGAAGTCTATCAATGTCTATCTGTGTTTTTTTTTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATTTGTGAAAATTTCTCTAAAAAAATTGCCACGTGACAAATTTGTCAATACCTAAATTTTTCTCTTTTTTTAGTTCAACTATAAGTGGGATAGAGTTCAACTATAAGTAGGATAGACATTCAAATTTCTGAATTTTTTTTTTTTTTTGGAATTATAACATCTTAATCAGTTGAGCTATAGGTTGACGTTTGTAAAATGTTGTGATTTTTTTTTATTTGCTTCGCTAAGAAAAAAAAGTGGGAAATTAAGAAAGTATATTTGATAGATTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAAATGGGAATGGAAAAGGAGAGAGTGGGAGAGATAAAAAGTTCAAATTTAATGACTTTGCCTTTTAAAACTGTTACATTGAGTTCTTTTAGCTTAAAAGGGTGTCATTTAAAGTCCTTGGTTGAAGGTGACACAAACATCTTTAAAACCACAGTAAATAAAAGTATGTATTGTGTGTACTTCAATATATTCCATCCCTTTTACTTAATCAATATCTCTTTATCCATTCCCTAATTAATAAACTATTATCTCTAAAATCCTCTCTAACTATAAAATTTCTCAATTATTTTAGTAGTCACACATTCAATCTAATATAAAAATACAACACAACCATAAGATAACATGGTTTTGTTTATTACATCACTCATTAAGTTGATGTTTCGATTTTCATTATAAAAATATTGAACTAATTATAAACATTTTTAGTCAAAACCCTAACCATTTATTAGATATGAAGACTTAACATTTTATTTTTGGTTTTTGTTTTTAAGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG ATGAGTTGTTATTCTTCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCCTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCAGTCGTGGCGGGGATTGAGAAGGCGACGGCAACGATGGTAGCTGAATTTAGTGGAATTTCCAAAGAGAAAGTGGTCGGCGGCCACCGCGGTGGCAAGGTTGTTCATCCAGAGTGGCATCTCAACTACATGAGCAAAAGAAGAGTTCCCAATGGCCCAGATCCTATTCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG ATGAGTTGTTATTCTTCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCCTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCAGTCGTGGCGGGGATTGAGAAGGCGACGGCAACGATGGTAGCTGAATTTAGTGGAATTTCCAAAGAGAAAGTGGTCGGCGGCCACCGCGGTGGCAAGGTTGTTCATCCAGAGTGGCATCTCAACTACATGAGCAAAAGAAGAGTTCCCAATGGCCCAGATCCTATTCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA Homology
BLAST of HG10004239 vs. NCBI nr
Match: XP_038886261.1 (uncharacterized protein LOC120076488 [Benincasa hispida]) HSP 1 Score: 163.7 bits (413), Expect = 8.5e-37 Identity = 90/109 (82.57%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of HG10004239 vs. NCBI nr
Match: XP_004146759.1 (uncharacterized protein LOC101209880 [Cucumis sativus] >KGN47786.1 hypothetical protein Csa_003437 [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 2.3e-34 Identity = 83/106 (78.30%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of HG10004239 vs. NCBI nr
Match: KAG7030012.1 (CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150.2 bits (378), Expect = 9.7e-33 Identity = 76/104 (73.08%), Postives = 82/104 (78.85%), Query Frame = 0
BLAST of HG10004239 vs. NCBI nr
Match: XP_008464794.1 (PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo] >KAA0045398.1 Clavata3/esr-related 26, putative isoform 1 [Cucumis melo var. makuwa] >TYK11343.1 Clavata3/esr-related 26, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 144.8 bits (364), Expect = 4.1e-31 Identity = 79/104 (75.96%), Postives = 82/104 (78.85%), Query Frame = 0
BLAST of HG10004239 vs. NCBI nr
Match: XP_022946527.1 (uncharacterized protein LOC111450563 [Cucurbita moschata] >KAG6599076.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.7 bits (361), Expect = 9.1e-31 Identity = 76/104 (73.08%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy Swiss-Prot
Match: Q8LFL4 (CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana OX=3702 GN=CLE25 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.7e-04 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy TrEMBL
Match: A0A0A0KJ25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G402550 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34 Identity = 83/106 (78.30%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy TrEMBL
Match: A0A5A7TRB3 (Clavata3/esr-related 26, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00170 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31 Identity = 79/104 (75.96%), Postives = 82/104 (78.85%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy TrEMBL
Match: A0A1S3CMA2 (uncharacterized protein LOC103502597 OS=Cucumis melo OX=3656 GN=LOC103502597 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31 Identity = 79/104 (75.96%), Postives = 82/104 (78.85%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy TrEMBL
Match: A0A6J1G3Y8 (uncharacterized protein LOC111450563 OS=Cucurbita moschata OX=3662 GN=LOC111450563 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31 Identity = 76/104 (73.08%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of HG10004239 vs. ExPASy TrEMBL
Match: A0A6J1KBR7 (uncharacterized protein LOC111494028 OS=Cucurbita maxima OX=3661 GN=LOC111494028 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30 Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 0
BLAST of HG10004239 vs. TAIR 10
Match: AT1G69970.2 (CLAVATA3/ESR-RELATED 26 ) HSP 1 Score: 52.4 bits (124), Expect = 2.6e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of HG10004239 vs. TAIR 10
Match: AT3G28455.1 (CLAVATA3/ESR-RELATED 25 ) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-05 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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