Homology
BLAST of HG10004220 vs. NCBI nr
Match:
XP_022999640.1 (putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucurbita maxima] >XP_022999641.1 putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 526/552 (95.29%), Postives = 541/552 (98.01%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL SNLFIGNALVAMYGKCGC
Sbjct: 126 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGC 185
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMPNRDVVSWNSMVAGYAQ+GQFDDALEICKEMDSLKLNHDAGTMASLLPV
Sbjct: 186 LREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV 245
Query: 121 V-CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDA 180
V +S ENV+Y+HNMFE+MARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDA
Sbjct: 246 VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEERGMKPDA 305
Query: 181 VTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDK 240
VTIASLLPACGDLSALFLGRRLHKYIEKDNL PNLLLENALLDMYAKCGCLEEARDVFDK
Sbjct: 306 VTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDK 365
Query: 241 MKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQG 300
MKLRDVVSWTSMMSAYG+SGQGYDAVALFAKMLDSGLNPDSI+FVSVLSACSHAGLL+QG
Sbjct: 366 MKLRDVVSWTSMMSAYGKSGQGYDAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQG 425
Query: 301 RHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 360
YFH+MTEQYRIVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACR
Sbjct: 426 SRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 485
Query: 361 VHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 420
VHSKMDIGL+AADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI
Sbjct: 486 VHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 545
Query: 421 SNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECH 480
SNVEL GQVHTFLAGDQYHPQAK+IYEELD+LVGKMKELGYIPQTESALHDVEVEDKECH
Sbjct: 546 SNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECH 605
Query: 481 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHH 540
LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH+AIKL+SKIVSRDII+RDCNRFHH
Sbjct: 606 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHVAIKLISKIVSRDIIIRDCNRFHH 665
Query: 541 FSNGICSCGDYW 552
FSNGICSCGDYW
Sbjct: 666 FSNGICSCGDYW 677
BLAST of HG10004220 vs. NCBI nr
Match:
XP_038886745.1 (putative pentatricopeptide repeat-containing protein At3g49142 [Benincasa hispida])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 526/551 (95.46%), Postives = 538/551 (97.64%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
MSS AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI+KVGLGSNLFIGNALVAMYGKCGC
Sbjct: 136 MSSFAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAILKVGLGSNLFIGNALVAMYGKCGC 195
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFD+ALEICKEM SLKLNH+AGTMASLLP
Sbjct: 196 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDNALEICKEMGSLKLNHNAGTMASLLPA 255
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTS ENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQME GMKPDA+
Sbjct: 256 VCYTSSENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEGCGMKPDAI 315
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYI KDNLRPNLLLENAL+DMYAKCGCLEEARDVFDKM
Sbjct: 316 TIASLLPACGDLSALFLGRRLHKYIVKDNLRPNLLLENALIDMYAKCGCLEEARDVFDKM 375
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
KLRDVVSWTSMMSAYGRSG+GYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR
Sbjct: 376 KLRDVVSWTSMMSAYGRSGRGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 435
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYFHVM EQYRIVPRIEHFACMVDL GRAGEVEEAYSFIK+MPMEPNERVWGALLSACRV
Sbjct: 436 HYFHVMMEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKKMPMEPNERVWGALLSACRV 495
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
HSKMDIGLVAADCL QLAPKQS YYVLLSNIYAKAGMWKDVM+VRYAMK +GIKKVPGIS
Sbjct: 496 HSKMDIGLVAADCLLQLAPKQSSYYVLLSNIYAKAGMWKDVMDVRYAMKNLGIKKVPGIS 555
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 556 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 615
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNT+HGTPIRITKNLRVCGDCHIAIKLMSK+VSRDIIVRDCNRFHHF
Sbjct: 616 AIHSEKLAIVFAILNTRHGTPIRITKNLRVCGDCHIAIKLMSKLVSRDIIVRDCNRFHHF 675
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 676 SNGICSCGDYW 686
BLAST of HG10004220 vs. NCBI nr
Match:
XP_004146744.1 (putative pentatricopeptide repeat-containing protein At3g49142 [Cucumis sativus] >KGN47808.1 hypothetical protein Csa_002946 [Cucumis sativus])
HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 526/551 (95.46%), Postives = 535/551 (97.10%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL +NLFIGNALVAMYGKCGC
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFDDALEICKEMDSL LNHDAGTMASL PV
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTSLENVQYIHNMFERM +K+L+SWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDAV
Sbjct: 248 VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYIEK NLRPNLLLENALLDMYAKCGCLEEARDVFDKM
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
+LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG NPDSIAFVSVLSACSH GLLDQGR
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYF +MTEQY IVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
HSKMDIGLVAAD LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIY ELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNTK GTPIRITKNLRVCGDCHIAIKL+SKIVSR+IIVRDCNRFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHF 667
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 668 SNGICSCGDYW 678
BLAST of HG10004220 vs. NCBI nr
Match:
XP_022946769.1 (putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moschata] >XP_022946770.1 putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moschata])
HSP 1 Score: 1073.9 bits (2776), Expect = 4.2e-310
Identity = 524/552 (94.93%), Postives = 539/552 (97.64%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
MSSCAF PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL SNLFIGNALVAMYGKCG
Sbjct: 126 MSSCAFYPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGR 185
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMPNRDVVSWNSMVAGYAQ+GQFDDALEICKEMDSLKLNHDAGTMASLLPV
Sbjct: 186 LREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV 245
Query: 121 V-CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDA 180
V +S ENV+Y+HNMFE+MARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDA
Sbjct: 246 VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDA 305
Query: 181 VTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDK 240
VTIASLLPACGDLSALFLGRRLHKYIEKDNL PNLLLENALLDMYAKCGCLEEARDVFDK
Sbjct: 306 VTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDK 365
Query: 241 MKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQG 300
MKLRDVVSWTSMMSAYG+SGQGYDAVALFAKMLDSGLNPDSI+FVSVLSACSHAGLL+QG
Sbjct: 366 MKLRDVVSWTSMMSAYGKSGQGYDAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQG 425
Query: 301 RHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 360
R YFH+MTEQYRIVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACR
Sbjct: 426 RRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 485
Query: 361 VHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 420
VHSKMDIGL+AADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR AMKKIGIKKVPGI
Sbjct: 486 VHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGI 545
Query: 421 SNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECH 480
SNVEL GQVHTFLAGDQYHPQAK+IYEELD+LVGKMKELGYIPQTESALHDVEVEDKECH
Sbjct: 546 SNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECH 605
Query: 481 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHH 540
LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH+AIKL+SKIVSRDII+RDCNRFHH
Sbjct: 606 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHVAIKLISKIVSRDIIIRDCNRFHH 665
Query: 541 FSNGICSCGDYW 552
FSNGICSCGDYW
Sbjct: 666 FSNGICSCGDYW 677
BLAST of HG10004220 vs. NCBI nr
Match:
XP_008456467.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142 [Cucumis melo])
HSP 1 Score: 1073.9 bits (2776), Expect = 4.2e-310
Identity = 524/551 (95.10%), Postives = 533/551 (96.73%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI+KVGL SNLFIGNALVAMYGKCGC
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAILKVGLDSNLFIGNALVAMYGKCGC 187
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFDDALEICKEMDSL LNHDAGTMASL PV
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTSLENVQYIH+MFERMA+K+LVSWNVMIAIYVNNSMPNEAV LFLQMEE GMKPDAV
Sbjct: 248 VCYTSLENVQYIHSMFERMAKKNLVSWNVMIAIYVNNSMPNEAVGLFLQMEECGMKPDAV 307
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYIEK NLRPNLLLENALLDMYAKCGCLEEARDVFDKM
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG PDSIAFVSVLSACSH GLLDQGR
Sbjct: 368 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQIPDSIAFVSVLSACSHTGLLDQGR 427
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYF +MTEQY IVPRIEHFACMVDL GRAGEVEEAYSF+KQMPMEPNERVWGALLSACRV
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFVKQMPMEPNERVWGALLSACRV 487
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
H KMDIGLVAAD LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKK+GIKKVPGIS
Sbjct: 488 HLKMDIGLVAADRLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKMGIKKVPGIS 547
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNTK GTPIRITKNLRVCGDCHIAIKL+SKI SRDIIVRDCNRFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIASRDIIVRDCNRFHHF 667
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 668 SNGICSCGDYW 678
BLAST of HG10004220 vs. ExPASy Swiss-Prot
Match:
P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)
HSP 1 Score: 800.4 bits (2066), Expect = 1.2e-230
Identity = 381/556 (68.53%), Postives = 455/556 (81.83%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M C PDHYTFPCVLKACS + +G ++H + KVGL S LF+GN LV+MYGKCG
Sbjct: 131 MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
L EAR VLD+M RDVVSWNS+V GYAQN +FDDALE+C+EM+S+K++HDAGTMASLLP
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
V T+ ENV Y+ +MF +M +KSLVSWNVMI +Y+ N+MP EAV L+ +ME G +PDAV
Sbjct: 251 VSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
+I S+LPACGD SAL LG+++H YIE+ L PNLLLENAL+DMYAKCGCLE+ARDVF+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
K RDVVSWT+M+SAYG SG+G DAVALF+K+ DSGL PDSIAFV+ L+ACSHAGLL++GR
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
F +MT+ Y+I PR+EH ACMVDLLGRAG+V+EAY FI+ M MEPNERVWGALL ACRV
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
HS DIGL+AAD LFQLAP+QSGYYVLLSNIYAKAG W++V N+R MK G+KK PG S
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVE+N +HTFL GD+ HPQ+ IY ELDVLV KMKELGY+P +ESALHDVE EDKE HL
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHL 610
Query: 481 AIHSEKLAIVFAILNTKH-----GTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCN 540
A+HSEKLAIVFA++NTK IRITKNLR+CGDCH+A KL+S+I SR+II+RD N
Sbjct: 611 AVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 670
Query: 541 RFHHFSNGICSCGDYW 552
RFH F G+CSCGDYW
Sbjct: 671 RFHVFRFGVCSCGDYW 686
BLAST of HG10004220 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-136
Identity = 242/613 (39.48%), Postives = 366/613 (59.71%), Query Frame = 0
Query: 8 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKC--------- 67
PDH FP VLK+C+ + +LR G VH IV++G+ +L+ GNAL+ MY K
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 68 ----------------------GCLR-----EARKVLDQMPNRDVVSWNSMVAGYAQNGQ 127
C+ R+V + MP +DVVS+N+++AGYAQ+G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 128 FDDALEICKEMDSLKLNHDAGTMASLLPVV------------------------------ 187
++DAL + +EM + L D+ T++S+LP+
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 188 ---CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPD 247
Y ++ +F R+ + +SWN ++A YV N NEA+ LF QM +KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 248 AVTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFD 307
AV +S++PAC L+ L LG++LH Y+ + N+ + +AL+DMY+KCG ++ AR +FD
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 308 KMKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQ 367
+M + D VSWT+++ + G G++AV+LF +M G+ P+ +AFV+VL+ACSH GL+D+
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 368 GRHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 427
YF+ MT+ Y + +EH+A + DLLGRAG++EEAY+FI +M +EP VW LLS+C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 428 RVHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPG 487
VH +++ A+ +F + + G YVL+ N+YA G WK++ +R M+K G++K P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 488 ISNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKEC 547
S +E+ + H F++GD+ HP I E L ++ +M++ GY+ T LHDV+ E K
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 548 HLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFH 552
L HSE+LA+ F I+NT+ GT IR+TKN+R+C DCH+AIK +SKI R+IIVRD +RFH
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
BLAST of HG10004220 vs. ExPASy Swiss-Prot
Match:
Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)
HSP 1 Score: 485.0 bits (1247), Expect = 1.2e-135
Identity = 244/593 (41.15%), Postives = 356/593 (60.03%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M + P +FPC +KACS L ++ G Q H G S++F+ +AL+ MY CG
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKE-------------MDS--- 120
L +ARKV D++P R++VSW SM+ GY NG DA+ + K+ +DS
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 121 -----------------------LKLNHDAGTMA--SLLPVVCYTSLENVQYIHNMFERM 180
+K D G +LL V +F+++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 181 ARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKP-DAVTIASLLPACGDLSALFLG 240
K VS+N ++++Y + M NEA +F ++ + + +A+T++++L A AL +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 241 RRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRS 300
+ +H + + L ++++ +++DMY KCG +E AR FD+MK ++V SWT+M++ YG
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 301 GQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEH 360
G A+ LF M+DSG+ P+ I FVSVL+ACSHAGL +G +F+ M ++ + P +EH
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 361 FACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADCLFQLA 420
+ CMVDLLGRAG +++AY I++M M+P+ +W +LL+ACR+H +++ ++ LF+L
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 421 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 480
GYY+LLS+IYA AG WKDV VR MK G+ K PG S +ELNG+VH FL GD+ H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 481 PQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH 540
PQ + IYE L L K+ E GY+ T S HDV+ E+KE L +HSEKLAI F I+NT
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 541 GTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
G+ + + KNLRVC DCH IKL+SKIV R+ +VRD RFHHF +G CSCGDYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of HG10004220 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 476.9 bits (1226), Expect = 3.2e-133
Identity = 243/591 (41.12%), Postives = 356/591 (60.24%), Query Frame = 0
Query: 8 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG-LGSNLFIGNALVAMYGKCGCLREARK 67
PD +T VL ACS L+ LR G ++H +K G L N F+G+ALV MY C + R+
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 68 VLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEM-DSLKLNHDAGTMASLLPVV---- 127
V D M +R + WN+M+AGY+QN +AL + M +S L ++ TMA ++P
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 128 -----------------------------CYTSLENVQYIHNMFERMARKSLVSWNVMIA 187
Y+ L + +F +M + LV+WN MI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 188 IYVNNSMPNEAVSLFLQME-----------EYGMKPDAVTIASLLPACGDLSALFLGRRL 247
YV + +A+ L +M+ +KP+++T+ ++LP+C LSAL G+ +
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 248 HKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRSGQG 307
H Y K+NL ++ + +AL+DMYAKCGCL+ +R VFD++ ++V++W ++ AYG G G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 308 YDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEHFAC 367
+A+ L M+ G+ P+ + F+SV +ACSH+G++D+G F+VM Y + P +H+AC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 368 MVDLLGRAGEVEEAYSFIKQMPMEPNER-VWGALLSACRVHSKMDIGLVAADCLFQLAPK 427
+VDLLGRAG ++EAY + MP + N+ W +LL A R+H+ ++IG +AA L QL P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 428 QSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQ 487
+ +YVLL+NIY+ AG+W VR MK+ G++K PG S +E +VH F+AGD HPQ
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 488 AKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGT 547
++ + L+ L +M++ GY+P T LH+VE ++KE L HSEKLAI F ILNT GT
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 548 PIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
IR+ KNLRVC DCH+A K +SKIV R+II+RD RFH F NG CSCGDYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of HG10004220 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 476.1 bits (1224), Expect = 5.4e-133
Identity = 231/573 (40.31%), Postives = 339/573 (59.16%), Query Frame = 0
Query: 9 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGCLREARKVL 68
D T +L A + L LR+G+Q+H K G S+ ++ +++Y KCG ++ +
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 69 DQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV-------- 128
+ D+V++N+M+ GY NG+ + +L + KE+ + T+ SL+PV
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 129 ----------------------VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNS 188
Y+ L ++ +F+ KSL SWN MI+ Y N
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 189 MPNEAVSLFLQMEEYGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLEN 248
+ +A+SLF +M++ P+ VTI +L AC L AL LG+ +H + + ++ +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 249 ALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNP 308
AL+ MYAKCG + EAR +FD M ++ V+W +M+S YG GQG +A+ +F +ML+SG+ P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 309 DSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSF 368
+ F+ VL ACSHAGL+ +G F+ M +Y P ++H+ACMVD+LGRAG ++ A F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 369 IKQMPMEPNERVWGALLSACRVHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMW 428
I+ M +EP VW LL ACR+H ++ ++ LF+L P GY+VLLSNI++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 429 KDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKEL 488
VR KK + K PG + +E+ H F +GDQ HPQ K IYE+L+ L GKM+E
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 489 GYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAI 548
GY P+TE ALHDVE E++E + +HSE+LAI F ++ T+ GT IRI KNLRVC DCH
Sbjct: 700 GYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVT 759
Query: 549 KLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
KL+SKI R I+VRD NRFHHF +G+CSCGDYW
Sbjct: 760 KLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of HG10004220 vs. ExPASy TrEMBL
Match:
A0A6J1KDN5 (putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493940 PE=3 SV=1)
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 526/552 (95.29%), Postives = 541/552 (98.01%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL SNLFIGNALVAMYGKCGC
Sbjct: 126 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGC 185
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMPNRDVVSWNSMVAGYAQ+GQFDDALEICKEMDSLKLNHDAGTMASLLPV
Sbjct: 186 LREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV 245
Query: 121 V-CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDA 180
V +S ENV+Y+HNMFE+MARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDA
Sbjct: 246 VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEERGMKPDA 305
Query: 181 VTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDK 240
VTIASLLPACGDLSALFLGRRLHKYIEKDNL PNLLLENALLDMYAKCGCLEEARDVFDK
Sbjct: 306 VTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDK 365
Query: 241 MKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQG 300
MKLRDVVSWTSMMSAYG+SGQGYDAVALFAKMLDSGLNPDSI+FVSVLSACSHAGLL+QG
Sbjct: 366 MKLRDVVSWTSMMSAYGKSGQGYDAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQG 425
Query: 301 RHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 360
YFH+MTEQYRIVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACR
Sbjct: 426 SRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 485
Query: 361 VHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 420
VHSKMDIGL+AADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI
Sbjct: 486 VHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 545
Query: 421 SNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECH 480
SNVEL GQVHTFLAGDQYHPQAK+IYEELD+LVGKMKELGYIPQTESALHDVEVEDKECH
Sbjct: 546 SNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECH 605
Query: 481 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHH 540
LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH+AIKL+SKIVSRDII+RDCNRFHH
Sbjct: 606 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHVAIKLISKIVSRDIIIRDCNRFHH 665
Query: 541 FSNGICSCGDYW 552
FSNGICSCGDYW
Sbjct: 666 FSNGICSCGDYW 677
BLAST of HG10004220 vs. ExPASy TrEMBL
Match:
A0A0A0KE24 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404230 PE=3 SV=1)
HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 526/551 (95.46%), Postives = 535/551 (97.10%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL +NLFIGNALVAMYGKCGC
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFDDALEICKEMDSL LNHDAGTMASL PV
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTSLENVQYIHNMFERM +K+L+SWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDAV
Sbjct: 248 VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYIEK NLRPNLLLENALLDMYAKCGCLEEARDVFDKM
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
+LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG NPDSIAFVSVLSACSH GLLDQGR
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYF +MTEQY IVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
HSKMDIGLVAAD LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIY ELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNTK GTPIRITKNLRVCGDCHIAIKL+SKIVSR+IIVRDCNRFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHF 667
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 668 SNGICSCGDYW 678
BLAST of HG10004220 vs. ExPASy TrEMBL
Match:
A0A6J1G4Z8 (putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucurbita moschata OX=3662 GN=LOC111450738 PE=3 SV=1)
HSP 1 Score: 1073.9 bits (2776), Expect = 2.0e-310
Identity = 524/552 (94.93%), Postives = 539/552 (97.64%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
MSSCAF PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL SNLFIGNALVAMYGKCG
Sbjct: 126 MSSCAFYPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGR 185
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMPNRDVVSWNSMVAGYAQ+GQFDDALEICKEMDSLKLNHDAGTMASLLPV
Sbjct: 186 LREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV 245
Query: 121 V-CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDA 180
V +S ENV+Y+HNMFE+MARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDA
Sbjct: 246 VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDA 305
Query: 181 VTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDK 240
VTIASLLPACGDLSALFLGRRLHKYIEKDNL PNLLLENALLDMYAKCGCLEEARDVFDK
Sbjct: 306 VTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDK 365
Query: 241 MKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQG 300
MKLRDVVSWTSMMSAYG+SGQGYDAVALFAKMLDSGLNPDSI+FVSVLSACSHAGLL+QG
Sbjct: 366 MKLRDVVSWTSMMSAYGKSGQGYDAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQG 425
Query: 301 RHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 360
R YFH+MTEQYRIVPRIEHFACMVDL GRAGEVEEAYSFIKQMPMEPNERVWGALLSACR
Sbjct: 426 RRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACR 485
Query: 361 VHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGI 420
VHSKMDIGL+AADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR AMKKIGIKKVPGI
Sbjct: 486 VHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGI 545
Query: 421 SNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECH 480
SNVEL GQVHTFLAGDQYHPQAK+IYEELD+LVGKMKELGYIPQTESALHDVEVEDKECH
Sbjct: 546 SNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECH 605
Query: 481 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHH 540
LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH+AIKL+SKIVSRDII+RDCNRFHH
Sbjct: 606 LAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHVAIKLISKIVSRDIIIRDCNRFHH 665
Query: 541 FSNGICSCGDYW 552
FSNGICSCGDYW
Sbjct: 666 FSNGICSCGDYW 677
BLAST of HG10004220 vs. ExPASy TrEMBL
Match:
A0A1S3C3E6 (putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucumis melo OX=3656 GN=LOC103496411 PE=3 SV=1)
HSP 1 Score: 1073.9 bits (2776), Expect = 2.0e-310
Identity = 524/551 (95.10%), Postives = 533/551 (96.73%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI+KVGL SNLFIGNALVAMYGKCGC
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAILKVGLDSNLFIGNALVAMYGKCGC 187
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFDDALEICKEMDSL LNHDAGTMASL PV
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTSLENVQYIH+MFERMA+K+LVSWNVMIAIYVNNSMPNEAV LFLQMEE GMKPDAV
Sbjct: 248 VCYTSLENVQYIHSMFERMAKKNLVSWNVMIAIYVNNSMPNEAVGLFLQMEECGMKPDAV 307
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYIEK NLRPNLLLENALLDMYAKCGCLEEARDVFDKM
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG PDSIAFVSVLSACSH GLLDQGR
Sbjct: 368 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQIPDSIAFVSVLSACSHTGLLDQGR 427
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYF +MTEQY IVPRIEHFACMVDL GRAGEVEEAYSF+KQMPMEPNERVWGALLSACRV
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFVKQMPMEPNERVWGALLSACRV 487
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
H KMDIGLVAAD LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKK+GIKKVPGIS
Sbjct: 488 HLKMDIGLVAADRLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKMGIKKVPGIS 547
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNTK GTPIRITKNLRVCGDCHIAIKL+SKI SRDIIVRDCNRFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIASRDIIVRDCNRFHHF 667
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 668 SNGICSCGDYW 678
BLAST of HG10004220 vs. ExPASy TrEMBL
Match:
A0A5D3BLJ5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00830 PE=3 SV=1)
HSP 1 Score: 1070.8 bits (2768), Expect = 1.8e-309
Identity = 523/551 (94.92%), Postives = 532/551 (96.55%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI+KVGL SNLFIGNALVAMYGKCGC
Sbjct: 51 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAILKVGLDSNLFIGNALVAMYGKCGC 110
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
LREARKVLDQMP RDVVSWNSMVAGYAQ+GQFDDALEICKEMDSL LNHDAGTMASL PV
Sbjct: 111 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 170
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
VCYTSLENVQYI +MFERMA+K+LVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDAV
Sbjct: 171 VCYTSLENVQYIRSMFERMAKKNLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 230
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
TIASLLPACGDLSALFLGRRLHKYIEK NLRPNLLLENALLDMYAKCGCLEEARDVFDKM
Sbjct: 231 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 290
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG PDSIAFVSVLSACSH GLLDQGR
Sbjct: 291 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQIPDSIAFVSVLSACSHTGLLDQGR 350
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
HYF +MTEQY IVPRIEHFACMVDL GRAGEVEEAYSF+KQMPMEPNERVWGALLSACRV
Sbjct: 351 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFVKQMPMEPNERVWGALLSACRV 410
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
H KMDIGLVAAD LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKK+GIKKVPGIS
Sbjct: 411 HLKMDIGLVAADRLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKMGIKKVPGIS 470
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL
Sbjct: 471 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 530
Query: 481 AIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHF 540
AIHSEKLAIVFAILNTK GTPIRITKNLRVCGDCH AIKL+SKI SRDIIVRDCNRFHHF
Sbjct: 531 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHFAIKLISKIASRDIIVRDCNRFHHF 590
Query: 541 SNGICSCGDYW 552
SNGICSCGDYW
Sbjct: 591 SNGICSCGDYW 601
BLAST of HG10004220 vs. TAIR 10
Match:
AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 800.4 bits (2066), Expect = 8.9e-232
Identity = 381/556 (68.53%), Postives = 455/556 (81.83%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M C PDHYTFPCVLKACS + +G ++H + KVGL S LF+GN LV+MYGKCG
Sbjct: 131 MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV 120
L EAR VLD+M RDVVSWNS+V GYAQN +FDDALE+C+EM+S+K++HDAGTMASLLP
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
Query: 121 VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPDAV 180
V T+ ENV Y+ +MF +M +KSLVSWNVMI +Y+ N+MP EAV L+ +ME G +PDAV
Sbjct: 251 VSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 181 TIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 240
+I S+LPACGD SAL LG+++H YIE+ L PNLLLENAL+DMYAKCGCLE+ARDVF+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 241 KLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGR 300
K RDVVSWT+M+SAYG SG+G DAVALF+K+ DSGL PDSIAFV+ L+ACSHAGLL++GR
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Query: 301 HYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 360
F +MT+ Y+I PR+EH ACMVDLLGRAG+V+EAY FI+ M MEPNERVWGALL ACRV
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490
Query: 361 HSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 420
HS DIGL+AAD LFQLAP+QSGYYVLLSNIYAKAG W++V N+R MK G+KK PG S
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Query: 421 NVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 480
NVE+N +HTFL GD+ HPQ+ IY ELDVLV KMKELGY+P +ESALHDVE EDKE HL
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHL 610
Query: 481 AIHSEKLAIVFAILNTKH-----GTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCN 540
A+HSEKLAIVFA++NTK IRITKNLR+CGDCH+A KL+S+I SR+II+RD N
Sbjct: 611 AVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 670
Query: 541 RFHHFSNGICSCGDYW 552
RFH F G+CSCGDYW
Sbjct: 671 RFHVFRFGVCSCGDYW 686
BLAST of HG10004220 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 488.4 bits (1256), Expect = 7.5e-138
Identity = 242/613 (39.48%), Postives = 366/613 (59.71%), Query Frame = 0
Query: 8 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKC--------- 67
PDH FP VLK+C+ + +LR G VH IV++G+ +L+ GNAL+ MY K
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 68 ----------------------GCLR-----EARKVLDQMPNRDVVSWNSMVAGYAQNGQ 127
C+ R+V + MP +DVVS+N+++AGYAQ+G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 128 FDDALEICKEMDSLKLNHDAGTMASLLPVV------------------------------ 187
++DAL + +EM + L D+ T++S+LP+
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 188 ---CYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKPD 247
Y ++ +F R+ + +SWN ++A YV N NEA+ LF QM +KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 248 AVTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFD 307
AV +S++PAC L+ L LG++LH Y+ + N+ + +AL+DMY+KCG ++ AR +FD
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 308 KMKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQ 367
+M + D VSWT+++ + G G++AV+LF +M G+ P+ +AFV+VL+ACSH GL+D+
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 368 GRHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 427
YF+ MT+ Y + +EH+A + DLLGRAG++EEAY+FI +M +EP VW LLS+C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 428 RVHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPG 487
VH +++ A+ +F + + G YVL+ N+YA G WK++ +R M+K G++K P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 488 ISNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKEC 547
S +E+ + H F++GD+ HP I E L ++ +M++ GY+ T LHDV+ E K
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 548 HLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFH 552
L HSE+LA+ F I+NT+ GT IR+TKN+R+C DCH+AIK +SKI R+IIVRD +RFH
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
BLAST of HG10004220 vs. TAIR 10
Match:
AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 485.0 bits (1247), Expect = 8.3e-137
Identity = 244/593 (41.15%), Postives = 356/593 (60.03%), Query Frame = 0
Query: 1 MSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGC 60
M + P +FPC +KACS L ++ G Q H G S++F+ +AL+ MY CG
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 LREARKVLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKE-------------MDS--- 120
L +ARKV D++P R++VSW SM+ GY NG DA+ + K+ +DS
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 121 -----------------------LKLNHDAGTMA--SLLPVVCYTSLENVQYIHNMFERM 180
+K D G +LL V +F+++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 181 ARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEEYGMKP-DAVTIASLLPACGDLSALFLG 240
K VS+N ++++Y + M NEA +F ++ + + +A+T++++L A AL +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 241 RRLHKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRS 300
+ +H + + L ++++ +++DMY KCG +E AR FD+MK ++V SWT+M++ YG
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 301 GQGYDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEH 360
G A+ LF M+DSG+ P+ I FVSVL+ACSHAGL +G +F+ M ++ + P +EH
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 361 FACMVDLLGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADCLFQLA 420
+ CMVDLLGRAG +++AY I++M M+P+ +W +LL+ACR+H +++ ++ LF+L
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 421 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 480
GYY+LLS+IYA AG WKDV VR MK G+ K PG S +ELNG+VH FL GD+ H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 481 PQAKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH 540
PQ + IYE L L K+ E GY+ T S HDV+ E+KE L +HSEKLAI F I+NT
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 541 GTPIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
G+ + + KNLRVC DCH IKL+SKIV R+ +VRD RFHHF +G CSCGDYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of HG10004220 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 476.9 bits (1226), Expect = 2.2e-134
Identity = 243/591 (41.12%), Postives = 356/591 (60.24%), Query Frame = 0
Query: 8 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG-LGSNLFIGNALVAMYGKCGCLREARK 67
PD +T VL ACS L+ LR G ++H +K G L N F+G+ALV MY C + R+
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 68 VLDQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEM-DSLKLNHDAGTMASLLPVV---- 127
V D M +R + WN+M+AGY+QN +AL + M +S L ++ TMA ++P
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 128 -----------------------------CYTSLENVQYIHNMFERMARKSLVSWNVMIA 187
Y+ L + +F +M + LV+WN MI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 188 IYVNNSMPNEAVSLFLQME-----------EYGMKPDAVTIASLLPACGDLSALFLGRRL 247
YV + +A+ L +M+ +KP+++T+ ++LP+C LSAL G+ +
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 248 HKYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRSGQG 307
H Y K+NL ++ + +AL+DMYAKCGCL+ +R VFD++ ++V++W ++ AYG G G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 308 YDAVALFAKMLDSGLNPDSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEHFAC 367
+A+ L M+ G+ P+ + F+SV +ACSH+G++D+G F+VM Y + P +H+AC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 368 MVDLLGRAGEVEEAYSFIKQMPMEPNER-VWGALLSACRVHSKMDIGLVAADCLFQLAPK 427
+VDLLGRAG ++EAY + MP + N+ W +LL A R+H+ ++IG +AA L QL P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 428 QSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQ 487
+ +YVLL+NIY+ AG+W VR MK+ G++K PG S +E +VH F+AGD HPQ
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 488 AKNIYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGT 547
++ + L+ L +M++ GY+P T LH+VE ++KE L HSEKLAI F ILNT GT
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 548 PIRITKNLRVCGDCHIAIKLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
IR+ KNLRVC DCH+A K +SKIV R+II+RD RFH F NG CSCGDYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of HG10004220 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 476.1 bits (1224), Expect = 3.8e-134
Identity = 231/573 (40.31%), Postives = 339/573 (59.16%), Query Frame = 0
Query: 9 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLGSNLFIGNALVAMYGKCGCLREARKVL 68
D T +L A + L LR+G+Q+H K G S+ ++ +++Y KCG ++ +
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 69 DQMPNRDVVSWNSMVAGYAQNGQFDDALEICKEMDSLKLNHDAGTMASLLPV-------- 128
+ D+V++N+M+ GY NG+ + +L + KE+ + T+ SL+PV
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 129 ----------------------VCYTSLENVQYIHNMFERMARKSLVSWNVMIAIYVNNS 188
Y+ L ++ +F+ KSL SWN MI+ Y N
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 189 MPNEAVSLFLQMEEYGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLRPNLLLEN 248
+ +A+SLF +M++ P+ VTI +L AC L AL LG+ +H + + ++ +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 249 ALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGLNP 308
AL+ MYAKCG + EAR +FD M ++ V+W +M+S YG GQG +A+ +F +ML+SG+ P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 309 DSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYRIVPRIEHFACMVDLLGRAGEVEEAYSF 368
+ F+ VL ACSHAGL+ +G F+ M +Y P ++H+ACMVD+LGRAG ++ A F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 369 IKQMPMEPNERVWGALLSACRVHSKMDIGLVAADCLFQLAPKQSGYYVLLSNIYAKAGMW 428
I+ M +EP VW LL ACR+H ++ ++ LF+L P GY+VLLSNI++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 429 KDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYEELDVLVGKMKEL 488
VR KK + K PG + +E+ H F +GDQ HPQ K IYE+L+ L GKM+E
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 489 GYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCHIAI 548
GY P+TE ALHDVE E++E + +HSE+LAI F ++ T+ GT IRI KNLRVC DCH
Sbjct: 700 GYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVT 759
Query: 549 KLMSKIVSRDIIVRDCNRFHHFSNGICSCGDYW 552
KL+SKI R I+VRD NRFHHF +G+CSCGDYW
Sbjct: 760 KLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022999640.1 | 0.0e+00 | 95.29 | putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucur... | [more] |
XP_038886745.1 | 0.0e+00 | 95.46 | putative pentatricopeptide repeat-containing protein At3g49142 [Benincasa hispid... | [more] |
XP_004146744.1 | 0.0e+00 | 95.46 | putative pentatricopeptide repeat-containing protein At3g49142 [Cucumis sativus]... | [more] |
XP_022946769.1 | 4.2e-310 | 94.93 | putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moscha... | [more] |
XP_008456467.1 | 4.2e-310 | 95.10 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142 [Cucum... | [more] |
Match Name | E-value | Identity | Description | |
P0C899 | 1.2e-230 | 68.53 | Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... | [more] |
Q9LW63 | 1.1e-136 | 39.48 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
Q9LW32 | 1.2e-135 | 41.15 | Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... | [more] |
Q7Y211 | 3.2e-133 | 41.12 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9SUH6 | 5.4e-133 | 40.31 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KDN5 | 0.0e+00 | 95.29 | putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 OS=Cuc... | [more] |
A0A0A0KE24 | 0.0e+00 | 95.46 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4042... | [more] |
A0A6J1G4Z8 | 2.0e-310 | 94.93 | putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucurbita mosc... | [more] |
A0A1S3C3E6 | 2.0e-310 | 95.10 | putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucumis melo O... | [more] |
A0A5D3BLJ5 | 1.8e-309 | 94.92 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
Match Name | E-value | Identity | Description | |
AT3G49142.1 | 8.9e-232 | 68.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G23330.1 | 7.5e-138 | 39.48 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G26782.1 | 8.3e-137 | 41.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G57430.1 | 2.2e-134 | 41.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G30700.1 | 3.8e-134 | 40.31 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |