HG10004178 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004178
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr08: 14469025 .. 14469885 (+)
RNA-Seq Expression	HG10004178
Synteny	HG10004178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGTAAACCCAGTGATGAACTGCCATTCACCTTTGAAAGGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGCTGAAAGCTCAGCAGAAATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAGCAGCATACAAAAAATGCTGTTCCTAATGTTATGAATCTGAAGAATAGTGTGATAGACAAATCTCATGAAACAACTCTGCACACTGAAGATTCGGAGGATTCAATCACGATGCTGAGGTCGATGAAAGAATGTGGGTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAACCAAGAAGGGGCTTGATCCGTAGTACTTCTGGTATGCAGCAGCAGCAGCCAGGGAGAATGAGCACTTGGAGATCGGCCAGTTGGGGGCGAAGAGCAATCGTTGCCCCACTCAATGATGACAGTGGTGGTTATATTTCGAGGGTATTCAAGTCGGCAAGGGAAAAGGCAAGCAACTTTAAGTGGCCACAGCTTGACATCAAAGAAGATCTTGTACAAGTTGAAGTTGATAAGCTACAACCACAAACTATTCAACCAACAGTTGCTTCTGCTAGTTCTAGTTCATCACAGCCAGATATGGACACTGAGGAGTTGCCTCTGTCCAGTCAAGTTAACGATGAGTCACAATGGGATGACCAGGTTGATGACGGTTTGAATACTGATTTACTTTCGGTTTCAGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCAAAACTGGAGGAGTGGTTGGGAGAATCTGGAGGCTCGAATGATTTAAGAGATTTGAGGGCAGGGAAAGGTTATTAA

mRNA sequence

ATGATTCGTAAACCCAGTGATGAACTGCCATTCACCTTTGAAAGGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGCTGAAAGCTCAGCAGAAATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAGCAGCATACAAAAAATGCTGTTCCTAATGTTATGAATCTGAAGAATAGTGTGATAGACAAATCTCATGAAACAACTCTGCACACTGAAGATTCGGAGGATTCAATCACGATGCTGAGGTCGATGAAAGAATGTGGGTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAACCAAGAAGGGGCTTGATCCGTAGTACTTCTGGTATGCAGCAGCAGCAGCCAGGGAGAATGAGCACTTGGAGATCGGCCAGTTGGGGGCGAAGAGCAATCGTTGCCCCACTCAATGATGACAGTGGTGGTTATATTTCGAGGGTATTCAAGTCGGCAAGGGAAAAGGCAAGCAACTTTAAGTGGCCACAGCTTGACATCAAAGAAGATCTTGTACAAGTTGAAGTTGATAAGCTACAACCACAAACTATTCAACCAACAGTTGCTTCTGCTAGTTCTAGTTCATCACAGCCAGATATGGACACTGAGGAGTTGCCTCTGTCCAGTCAAGTTAACGATGAGTCACAATGGGATGACCAGGTTGATGACGGTTTGAATACTGATTTACTTTCGGTTTCAGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCAAAACTGGAGGAGTGGTTGGGAGAATCTGGAGGCTCGAATGATTTAAGAGATTTGAGGGCAGGGAAAGGTTATTAA

Coding sequence (CDS)

ATGATTCGTAAACCCAGTGATGAACTGCCATTCACCTTTGAAAGGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGCTGAAAGCTCAGCAGAAATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAGCAGCATACAAAAAATGCTGTTCCTAATGTTATGAATCTGAAGAATAGTGTGATAGACAAATCTCATGAAACAACTCTGCACACTGAAGATTCGGAGGATTCAATCACGATGCTGAGGTCGATGAAAGAATGTGGGTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAACCAAGAAGGGGCTTGATCCGTAGTACTTCTGGTATGCAGCAGCAGCAGCCAGGGAGAATGAGCACTTGGAGATCGGCCAGTTGGGGGCGAAGAGCAATCGTTGCCCCACTCAATGATGACAGTGGTGGTTATATTTCGAGGGTATTCAAGTCGGCAAGGGAAAAGGCAAGCAACTTTAAGTGGCCACAGCTTGACATCAAAGAAGATCTTGTACAAGTTGAAGTTGATAAGCTACAACCACAAACTATTCAACCAACAGTTGCTTCTGCTAGTTCTAGTTCATCACAGCCAGATATGGACACTGAGGAGTTGCCTCTGTCCAGTCAAGTTAACGATGAGTCACAATGGGATGACCAGGTTGATGACGGTTTGAATACTGATTTACTTTCGGTTTCAGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCAAAACTGGAGGAGTGGTTGGGAGAATCTGGAGGCTCGAATGATTTAAGAGATTTGAGGGCAGGGAAAGGTTATTAA

Protein sequence

MIRKPSDELPFTFERMYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQPGRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDKLQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDDFRADKEAKLEEWLGESGGSNDLRDLRAGKGY

Homology

[Close]

BLAST of HG10004178 vs. NCBI nr
Match: XP_038884987.1 (uncharacterized protein LOC120075565 isoform X1 [Benincasa hispida] >XP_038884988.1 uncharacterized protein LOC120075565 isoform X1 [Benincasa hispida])

HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 261/288 (90.62%), Postives = 273/288 (94.79%), Query Frame = 0


Query: 1   MIRKPSDELPFTFERMYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPN 60
           M  KPSDELPFTFERMYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPN
Sbjct: 1   MFHKPSDELPFTFERMYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPN 60

Query: 61  VMNLKNSVIDKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPR 120
           V+NLKNSV+DKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPR
Sbjct: 61  VINLKNSVVDKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPR 120

Query: 121 RGLIRSTSGM--QQQQPGRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFK 180
           RGLIR+TSGM  QQQQPGRMSTWRSA+WGRRAIVAPL+DDSGGYIS VFKSAREKASNFK
Sbjct: 121 RGLIRNTSGMLQQQQQPGRMSTWRSATWGRRAIVAPLDDDSGGYISTVFKSAREKASNFK 180

Query: 181 WPQLDIKEDLVQVEVDKLQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQV 240
           WPQL+I+EDL QVEVDKLQPQ IQP VA A+SSSSQPDMDTEELPLSSQVNDESQ +DQV
Sbjct: 181 WPQLEIREDLAQVEVDKLQPQPIQPPVAPATSSSSQPDMDTEELPLSSQVNDESQREDQV 240

Query: 241 DDGLNTDLLSVSDNFDDFRADKEAKLEEWLGESGGSNDLRDLRAGKGY 287
           +D LNTDLL VSDNFDDFRADKEAKLEEWLGESGG N+ RDLR GKG+
Sbjct: 241 EDNLNTDLLLVSDNFDDFRADKEAKLEEWLGESGGLNE-RDLRTGKGH 287

[Close]

BLAST of HG10004178 vs. NCBI nr
Match: KAA0036499.1 (uncharacterized protein E6C27_scaffold147G00680 [Cucumis melo var. makuwa] >TYJ99982.1 uncharacterized protein E5676_scaffold360G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-130
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSI MLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSIAMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRSA+WGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL  VEVDK
Sbjct: 121 GRMSTWRSATWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ+IQP VAS +SSSSQPDMD EELPLSSQVNDESQ DD+VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQSIQPPVASTTSSSSQPDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAGKGY 287
           FRADKEAKLEEWLG S G NDLRDLRAG G+
Sbjct: 241 FRADKEAKLEEWLGGSSGLNDLRDLRAGLGF 271

[Close]

BLAST of HG10004178 vs. NCBI nr
Match: XP_038884989.1 (uncharacterized protein LOC120075565 isoform X2 [Benincasa hispida] >XP_038884990.1 uncharacterized protein LOC120075565 isoform X2 [Benincasa hispida])

HSP 1 Score: 474.9 bits (1221), Expect = 4.8e-130
Identity = 248/273 (90.84%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGM--QQQ 135
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIR+TSGM  QQQ
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRNTSGMLQQQQ 120

Query: 136 QPGRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEV 195
           QPGRMSTWRSA+WGRRAIVAPL+DDSGGYIS VFKSAREKASNFKWPQL+I+EDL QVEV
Sbjct: 121 QPGRMSTWRSATWGRRAIVAPLDDDSGGYISTVFKSAREKASNFKWPQLEIREDLAQVEV 180

Query: 196 DKLQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNF 255
           DKLQPQ IQP VA A+SSSSQPDMDTEELPLSSQVNDESQ +DQV+D LNTDLL VSDNF
Sbjct: 181 DKLQPQPIQPPVAPATSSSSQPDMDTEELPLSSQVNDESQREDQVEDNLNTDLLLVSDNF 240

Query: 256 DDFRADKEAKLEEWLGESGGSNDLRDLRAGKGY 287
           DDFRADKEAKLEEWLGESGG N+ RDLR GKG+
Sbjct: 241 DDFRADKEAKLEEWLGESGGLNE-RDLRTGKGH 272

[Close]

BLAST of HG10004178 vs. NCBI nr
Match: XP_008456524.1 (PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo] >XP_008456525.1 PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo])

HSP 1 Score: 473.0 bits (1216), Expect = 1.8e-129
Identity = 244/268 (91.04%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSI MLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSIAMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRSA+WGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL  VEVDK
Sbjct: 121 GRMSTWRSATWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ+IQP VAS +SSSSQPDMD EELPLSSQVNDESQ DD+VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQSIQPPVASTTSSSSQPDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAG 284
           FRADKEAKLEEWLG S G NDLRDLRAG
Sbjct: 241 FRADKEAKLEEWLGGSSGLNDLRDLRAG 268

[Close]

BLAST of HG10004178 vs. NCBI nr
Match: XP_011657506.1 (uncharacterized protein LOC101218921 isoform X1 [Cucumis sativus] >XP_011657507.1 uncharacterized protein LOC101218921 isoform X1 [Cucumis sativus] >XP_011657508.1 uncharacterized protein LOC101218921 isoform X1 [Cucumis sativus] >XP_031743601.1 uncharacterized protein LOC101218921 isoform X1 [Cucumis sativus])

HSP 1 Score: 467.2 bits (1201), Expect = 9.9e-128
Identity = 241/268 (89.93%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+ KSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRS SWGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL +VEVDK
Sbjct: 121 GRMSTWRSTSWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ IQP VAS +SSSSQPD+D EELPLSSQVND+SQ DD VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQAIQPPVASTTSSSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAG 284
           FRADKEAKLEEWLG S G N+LRDLRAG
Sbjct: 241 FRADKEAKLEEWLGGSSGLNNLRDLRAG 268

[Close]

BLAST of HG10004178 vs. ExPASy TrEMBL
Match: A0A5A7T575 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00270 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.4e-130
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSI MLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSIAMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRSA+WGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL  VEVDK
Sbjct: 121 GRMSTWRSATWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ+IQP VAS +SSSSQPDMD EELPLSSQVNDESQ DD+VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQSIQPPVASTTSSSSQPDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAGKGY 287
           FRADKEAKLEEWLG S G NDLRDLRAG G+
Sbjct: 241 FRADKEAKLEEWLGGSSGLNDLRDLRAGLGF 271

[Close]

BLAST of HG10004178 vs. ExPASy TrEMBL
Match: A0A1S3C3G0 (uncharacterized protein LOC103496452 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496452 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.8e-130
Identity = 244/268 (91.04%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSI MLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSIAMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRSA+WGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL  VEVDK
Sbjct: 121 GRMSTWRSATWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ+IQP VAS +SSSSQPDMD EELPLSSQVNDESQ DD+VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQSIQPPVASTTSSSSQPDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAG 284
           FRADKEAKLEEWLG S G NDLRDLRAG
Sbjct: 241 FRADKEAKLEEWLGGSSGLNDLRDLRAG 268

[Close]

BLAST of HG10004178 vs. ExPASy TrEMBL
Match: A0A0A0KE70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G407090 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.8e-128
Identity = 241/268 (89.93%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+ KSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQP
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRS SWGRRAI AP NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL +VEVDK
Sbjct: 121 GRMSTWRSTSWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDK 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           LQPQ IQP VAS +SSSSQPD+D EELPLSSQVND+SQ DD VD+ LNTDLLSVSDNFDD
Sbjct: 181 LQPQAIQPPVASTTSSSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDLRAG 284
           FRADKEAKLEEWLG S G N+LRDLRAG
Sbjct: 241 FRADKEAKLEEWLGGSSGLNNLRDLRAG 268

[Close]

BLAST of HG10004178 vs. ExPASy TrEMBL
Match: A0A6J1FML8 (uncharacterized protein LOC111445573 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445573 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 225/265 (84.91%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+GFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHET
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
           TLH EDSEDSITML+SMK+CGFPIADEMIRDI+KSLA+MSTKQPRRGLIR+TSG   QQP
Sbjct: 61  TLHAEDSEDSITMLQSMKDCGFPIADEMIRDIKKSLAVMSTKQPRRGLIRNTSG--TQQP 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
           GRMSTWRSA+WGR AIVAP +DDSGGYIS VFKSAREKASNFKWPQLDIKEDL +VEVD+
Sbjct: 121 GRMSTWRSATWGRSAIVAPRDDDSGGYISTVFKSAREKASNFKWPQLDIKEDLARVEVDE 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
           L PQ  +P VASASS+SSQPD+DTEELPL+ QVNDE Q D+QVD G+NTDLLSVSDNFDD
Sbjct: 181 LPPQPNEPPVASASSTSSQPDIDTEELPLARQVNDELQRDEQVDVGMNTDLLSVSDNFDD 240

Query: 256 FRADKEAKLEEWLGESGGSNDLRDL 281
           FRADKEAKLEEWLG SGG ND++++
Sbjct: 241 FRADKEAKLEEWLGGSGGLNDVKEI 263

[Close]

BLAST of HG10004178 vs. ExPASy TrEMBL
Match: A0A1S3C453 (uncharacterized protein LOC103496452 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496452 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 226/249 (90.76%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 35  MIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHETTLHTEDSEDSITMLRSMKE 94
           MIKYIANEPSTGLFYIQQHTKNAVPNV+NLKNSV+DKSHETTLHTEDSEDSI MLRSMKE
Sbjct: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHTEDSEDSIAMLRSMKE 60

Query: 95  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQPGRMSTWRSASWGRRAIVAP 154
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLI +TSGMQQQQPGRMSTWRSA+WGRRAI AP
Sbjct: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSATWGRRAIGAP 120

Query: 155 LNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDKLQPQTIQPTVASASSSSSQ 214
            NDDSGGYIS VFKSAREKASNFKWPQLDIKEDL  VEVDKLQPQ+IQP VAS +SSSSQ
Sbjct: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDKLQPQSIQPPVASTTSSSSQ 180

Query: 215 PDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDDFRADKEAKLEEWLGESGGS 274
           PDMD EELPLSSQVNDESQ DD+VD+ LNTDLLSVSDNFDDFRADKEAKLEEWLG S G 
Sbjct: 181 PDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240

Query: 275 NDLRDLRAG 284
           NDLRDLRAG
Sbjct: 241 NDLRDLRAG 249

[Close]

BLAST of HG10004178 vs. TAIR 10
Match: AT2G39170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 119/262 (45.42%), Postives = 161/262 (61.45%), Query Frame = 0


Query: 16  MYGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVMNLKNSVIDKSHET 75
           M+ FSTVDGF EI ES AEMIKYIANEPS GL+YIQQH +NA PNV+NL N+V++KS ET
Sbjct: 1   MHEFSTVDGFAEINESLAEMIKYIANEPSVGLYYIQQHIRNAAPNVINLNNNVLEKSRET 60

Query: 76  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIRSTSGMQQQQP 135
            LHTED EDSI M++SMK+CG PIADEMI DI+ SLAIMS+KQPRRG+I +++    +  
Sbjct: 61  GLHTEDLEDSIAMVKSMKDCGSPIADEMIGDIKNSLAIMSSKQPRRGVILNSTSPWSRSS 120

Query: 136 GRMSTWRSASWGRRAIVAPLNDDSGGYISRVFKSAREKASNFKWPQLDIKEDLVQVEVDK 195
              +  R +   +       N +S  Y + VF +A+EKASN KWPQLD KE         
Sbjct: 121 SITTRTRGSDNSQD------NSESSNYFTSVFMTAKEKASNIKWPQLDFKE--------- 180

Query: 196 LQPQTIQPTVASASSSSSQPDMDTEELPLSSQVNDESQWDDQVDDGLNTDLLSVSDNFDD 255
                          S + P++ + EL          + +++ D G    ++  +  F++
Sbjct: 181 -------------QKSEADPNVQSNEL----------KEEEEEDSGKGEHIVETT-KFEE 223

Query: 256 FRADKEAKLEEWLGESGGSNDL 278
           F+A KEA L+ WLG+  G+ D+
Sbjct: 241 FKAGKEASLKAWLGDMDGNVDV 223

The following BLAST results are available for this feature:

BLAST of HG10004178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884987.1	2.1e-138	90.63	uncharacterized protein LOC120075565 isoform X1 [Benincasa hispida] >XP_03888498...	[more]
KAA0036499.1	2.8e-130	90.41	uncharacterized protein E6C27_scaffold147G00680 [Cucumis melo var. makuwa] >TYJ9...	[more]
XP_038884989.1	4.8e-130	90.84	uncharacterized protein LOC120075565 isoform X2 [Benincasa hispida] >XP_03888499...	[more]
XP_008456524.1	1.8e-129	91.04	PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_011657506.1	9.9e-128	89.93	uncharacterized protein LOC101218921 isoform X1 [Cucumis sativus] >XP_011657507....	[more]

BLAST of HG10004178 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T575	1.4e-130	90.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C3G0	8.8e-130	91.04	uncharacterized protein LOC103496452 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KE70	4.8e-128	89.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G407090 PE=3 SV=1	[more]
A0A6J1FML8	1.8e-119	84.91	uncharacterized protein LOC111445573 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3C453	1.8e-119	90.76	uncharacterized protein LOC103496452 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10004178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39170.1	1.5e-52	45.42	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (In...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019320	BLOC-1-related complex subunit 8	PFAM	PF10167	BORCS8	coord: 20..126 e-value: 3.4E-27 score: 94.6
IPR019320	BLOC-1-related complex subunit 8	PANTHER	PTHR21146	MEF2B PROTEIN	coord: 15..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004178.1	HG10004178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005765	lysosomal membrane