HG10004147 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004147
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent RNA helicase DDX42
LocationChr08: 14180251 .. 14185197 (-)
RNA-Seq ExpressionHG10004147
SyntenyHG10004147
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGGGCGACGATGTGGTGGCGAGGAAAAAGAACAAAGCCACCCGGAAGAAGCTTCGAAGCAAGAACGGGGACTCCTCGTCCGTTTCTGCGAGAGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTATGTCCGGGAAACGCAGACAATGCCAGGTAACTTCGGAACTATTCATTCTTGTGTTATTTGATTCACATTATAGGGTTTACGAAGTTATTTTGTGCTTTAGAGTAGCGTTCTATGCTTGAGGAGTGACACTAGTAGAATAAGGGCTATTCATTTTGGATTTATCGTTGGTAGGCGGAACTTTACCTTGCTTTAGGGATGATATAACTTATAAATTAGGTGTTGTTTGATTTTCTCTACAATATGAAAATGCTTGTTAGCGAAGAGGATTGTCCGTGATTGATTTGTTTTGATTAGATCATACTTTTAACTCGTAAATTAAGTTCGCTGCTCTACATGCTGACTTAGGGACAGTGACTAGCCTAACCCGCCGGAATCTTACCTTTGTTTTGCCAGTCGTCTGTATTAATTACTCCGTCTGTGTAATTGATATACTCATCTCAATGGTTGTAAATATACGGAGTTTGAATTTGTTGCATTTCAGGGAATGTGTTTTAGCCTTCCTACTCCTGATGATCCCTACAATGATAGAAATGGGAAAAAGGATTTGAATAAGGACACTAAGGTCGCGCCTTCAAAGGGCTCCAAGAGGGAATTTCCAAAGGAGAAGAGTACTTCAGCACCTAATGGAACCCTTCGAGACGTTGGCCGTGAGAAAGTTCGGAGTTTAAAAGAAGGGTCTGCAGATACTGTCACTAGTGGCCACATAGCTAAAAGAAGCAAGACTGGTCCTGAAAGAACAAAAATATATGGAAATGTGAAAGGCGGTGTCAGTGTGCAAGGCTTTCAAGAAGAAGACTCTGAAAGTTCTCTCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAATGCCCTATATCATGATTCCATCAAAAGAATCAACAAGCCTCTGTTTGCTGATACTTGGGGAATTGAGTTTTGGAAATGTTATTCTTCTGGGAAGGATATTCTTGACACCAGTGGGCTGTCTTCTACAGACGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAGGAGAAAGAAGGTTCATCTTTTAGTAGCCCTTATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAAGTTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATCCTGGGGCATCCCTAGGCCACCAAATTCAAGGGTAAGCTTGTCTGTGTGTCAATATATTGTAACAGATTTTTTGTTTTAGCTTGAGCTGTGAAATATTTGAGAATATCAATTATTTGTTTATTGTACATCTTGTACGCTGCTGTTTATACAATGGATCTGGTAGTGATTACTTGACCCTGTACCATGTGTTGTATTTAGCATTGTAAACAATTTGGACACTATTTGTTTTTTCTATTTTATATCTAATTGGGGATTTATCTCTCTTCCCATAGTTTGAAGAGCTGTGAACCTGAATTCCTTGTGTCCACGCCTGAGAGACTCTTGGAGCTTGTTGCGATGCAGGCTATTGATATATCTGGTGTTTCGTTGCTGGTAATTTGCAGTCTATGGTTACTATTTGAAGTATTGTTTTATATTTTTTTCTCTGTTCTTTGTGATGAATTTTAATGATTGGAAAATACTTTTACTGTTTCAGACTTGGTTATTCACTCCTTAGGCTTTATAGATGTCATTTCTACAAAACCATAATGGGTTGACCTAGTAGTAGTAGGAACATAAAAAAAAGACTAAAGACCTAAGGAGTTATGGGTTCAATCCATGGTGGCCTACCTATGATTTTATATCCTATGGGTTTTCTTGACACCCAAATGTTGTAGGGTAAGACGAGTTGTCATTAAAAAACAAAAATGTCATTTCTACAATCAAGTATTAAAATACCGATTCTGATGTCAATTACGGAATTTCAACGTTATGGATATATTGATAGATATGTCGATATTAATAGATATTTTTGTAAACAAAAATTTTATAATAATTTTTAAATTAATAGTTAAGTGTTTTCTACCTACTAAGTTAAACATCTTGTTATTTCCATTTCGATTCGTATTAAGATAAATAGATGATTTCTTTTTTTATGTTGTCTATAAGTATTAATAAAAAGAAATCTCAGAGATATCAATTAATTCTTAATATGGATATTGGATCCTCTAGTTAACGAATATATTGACATATCAATGAATATTTTAATCCTTGTCTACAACGTATTGGCTCAACTATAATTCTATCAAGGTGTCTAAAGATGAACGGGTGGCTTGTTTTTACTTTAGAATTATACAGTATCAGTATGTCACTGAATGCCTATTGTCAGTATTATGGACATTCTGTTTTAAGATTTGTAATTTCCTTGACGTTTTATCAGGTCGTCGATGGACTGGAATCTCTTTCAAGAGGTGGTTATCTTGATATGACACAGTCCATCAGGAAGTCCATATCAAGCAAACTGCATACAATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCTGTTGTACAAAGCCTCCTCGGGGGCCCAATTCGAAGACTGTCTCTTAATACTTCTGTGGCCTGTCAAAGTGCCTGCATTATTCAGTCGATAAACTTTTATACTTCTGAAGAGGAAAAACTATCAAAGGTACGTAAGGACATTATTTTCACATATTTGAGGTGCACGGCAGCCTTGTGAACCGTGAGGAAGTCTCTGTTCAGTCTTCCACAACCCTTTTTTAGAAGGAATTTTTCTTGATGAATTTTATGTCGCAATTGTGGGGCCAACTTCTTAAGCCTTGAGATAGCAGTTATTTGCCAAGTAATGATGTAAGAGGGATAGATGTCTTATCCAAGCTTCTAGGAAACTTTTGATTGTGGATGAGATCCTCACATTCTGATTCTGGTCAATCACTTTTGAGCTTTTCACTTTTTAGTTGGTAATTCTTACTCCTAAAGTCATTGTTTGCACTTTGCAGCAATATTAAGAAAAGAAGCTTCTCCTTTTATCTTCGACTTTTCATTTTACTCTCTTACACTAGGATTGGGAATTTTATTAATAGTCATCATTAATGATCTTTGAAGGTCATCCAAGCTTTGAATCGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTTTTTATTCTTGGAAAGGAGTGTAATGTTCACGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGACATCGTAGCTGGAGCATTATGTGGTGTCCCAGAAATTAAGAACAAGTAAGCATGCGCAAGGCAATAGATTTTGTATGCCATTCTAAAGGTTTATTTTATTTTATTTTTATTTTTTAATTAAAAATTTTATAATATAAAATACATATTTTTATTTTTTTTCCCCCTAATCAAGTGCATGGGCCTCCTTGACAACCAACAAGTGTGTATTTGCTATTTTTCTTTAATTTTTCTTACATCACAGCATTTAAGTTATTTACCGATTATTCAAGTTTCTTATAAAATACAGTTATTTGTCAATTAGTTAATAGCTGATTCCTTGTCTTCCTACTTGGATTTATGAGTCGTTGATGGGTTTTCTGTAGAAGTTATAGATTGTAACTTGTAAGACATGCATGTAGAAAGTAGAATGCCTCTCCCTGTCAGGTAGGGTTCATGTGAATTTCATTTGCTAAATATTGGCATTAGAACTGTGGATGCCAGAAAAACGTCGAGTGTCTTTCAAACGATTAGGGTTCGATAACTTTTTTGTTTTTGAAAATTAAGCTTACAAACATGATTTCCACCTATTAATTTCTTTGTTTATCTACTTTTTAGGAGTGTTCTCAAAATCCAAAGCAAGTCTTGAAATCTAAAACAAAGTAGTTTTTAGGCTCGTTTGGTAACTATTTGTTTTTAGTTTTTAGTTCTTGAAAATTAAGCCTATAAACACCCATTCCACCTCTAAATTTCTTGCATTGTCAATCTACTTTTTACCAAGATTTTCAAAAATCAAACTAAAAAAAGTAGTTTTTAAAAGAACTTATTTTTTGAATTTGAAATTTGGCCAAGAATTCTACTATTTTAAGTAAAATATGCAAACCATCTTATGAAATTGAGAGGACGCAAACTTAATTTTCAAGAACTAAAAACCAAATGGTTACCAAACAAGGGTTTAAAAATTTGTTTTTGTTTTTGAAATTTGTCTAAAAATTCAAATGTTTACTTAAAAAAAACAAAAACAATGATAAGGAAATTACGAGAAAACAAGCTCAATTCTCAAAAACTAGGACCTTAGTTATTATTAATGCTCCATTATCTAGTAGGAAACAAGGATTGCCATGTGTGTCTTCTAATAATTTTCTGTTAAAAGCTTTGAGCTTCCTAGCTTATCCATTTTTGTACTTCTACTCAGGAGTGTTAGAACCTGAATCGAACTGGACCAGTTCGGTTCAGGATGATCGTTTTCTATCGTGGTTTGGACCGAACCGAACCCTTTTCTTTTAGGATTTTAAGTTCTACTCTACTAGAAGAAAACTAATCAATTTTTACCCACTTTTCTTTGTTTAGTTCGAAAGTAGATGGCAGATTGAGGCCCGTTGTAGCCAAGATTGACATAGAGCAAATTAACACCATAGATCTTGGAAATTATGAAAGCATATTCATACTCTGTGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGACACACGGTCAACGGTGTCTTGCACAGCTTCATCAGCAAGGAAGAAGCATCGGTTGCTGGCTCCTTGGTTGAAATCCTTGAACAATGTGGGCAGGATGTCCCTGAAACTGTAAGAAACTTATCCCTCACACAAGGCTCATCTCAATCTTGA

mRNA sequence

ATGGCGAAGGGCGACGATGTGGTGGCGAGGAAAAAGAACAAAGCCACCCGGAAGAAGCTTCGAAGCAAGAACGGGGACTCCTCGTCCGTTTCTGCGAGAGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTATGTCCGGGAAACGCAGACAATGCCAGGGAATGTGTTTTAGCCTTCCTACTCCTGATGATCCCTACAATGATAGAAATGGGAAAAAGGATTTGAATAAGGACACTAAGGTCGCGCCTTCAAAGGGCTCCAAGAGGGAATTTCCAAAGGAGAAGAGTACTTCAGCACCTAATGGAACCCTTCGAGACGTTGGCCGTGAGAAAGTTCGGAGTTTAAAAGAAGGGTCTGCAGATACTGTCACTAGTGGCCACATAGCTAAAAGAAGCAAGACTGGTCCTGAAAGAACAAAAATATATGGAAATGTGAAAGGCGGTGTCAGTGTGCAAGGCTTTCAAGAAGAAGACTCTGAAAGTTCTCTCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAATGCCCTATATCATGATTCCATCAAAAGAATCAACAAGCCTCTGTTTGCTGATACTTGGGGAATTGAGTTTTGGAAATGTTATTCTTCTGGGAAGGATATTCTTGACACCAGTGGGCTGTCTTCTACAGACGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAGGAGAAAGAAGGTTCATCTTTTAGTAGCCCTTATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAAGTTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATCCTGGGGCATCCCTAGGCCACCAAATTCAAGGTTTGAAGAGCTGTGAACCTGAATTCCTTGTGTCCACGCCTGAGAGACTCTTGGAGCTTGTTGCGATGCAGGCTATTGATATATCTGGTGTTTCGTTGCTGGTCGTCGATGGACTGGAATCTCTTTCAAGAGGTGGTTATCTTGATATGACACAGTCCATCAGGAAGTCCATATCAAGCAAACTGCATACAATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCTGTTGTACAAAGCCTCCTCGGGGGCCCAATTCGAAGACTGTCTCTTAATACTTCTGTGGCCTGTCAAAGTGCCTGCATTATTCAGTCGATAAACTTTTATACTTCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGAATCGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTTTTTATTCTTGGAAAGGAGTGTAATGTTCACGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGACATCGTAGCTGGAGCATTATGTGGTGTCCCAGAAATTAAGAACAATTCGAAAGTAGATGGCAGATTGAGGCCCGTTGTAGCCAAGATTGACATAGAGCAAATTAACACCATAGATCTTGGAAATTATGAAAGCATATTCATACTCTGTGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGACACACGGTCAACGGTGTCTTGCACAGCTTCATCAGCAAGGAAGAAGCATCGGTTGCTGGCTCCTTGGTTGAAATCCTTGAACAATGTGGGCAGGATGTCCCTGAAACTGTAAGAAACTTATCCCTCACACAAGGCTCATCTCAATCTTGA

Coding sequence (CDS)

ATGGCGAAGGGCGACGATGTGGTGGCGAGGAAAAAGAACAAAGCCACCCGGAAGAAGCTTCGAAGCAAGAACGGGGACTCCTCGTCCGTTTCTGCGAGAGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTATGTCCGGGAAACGCAGACAATGCCAGGGAATGTGTTTTAGCCTTCCTACTCCTGATGATCCCTACAATGATAGAAATGGGAAAAAGGATTTGAATAAGGACACTAAGGTCGCGCCTTCAAAGGGCTCCAAGAGGGAATTTCCAAAGGAGAAGAGTACTTCAGCACCTAATGGAACCCTTCGAGACGTTGGCCGTGAGAAAGTTCGGAGTTTAAAAGAAGGGTCTGCAGATACTGTCACTAGTGGCCACATAGCTAAAAGAAGCAAGACTGGTCCTGAAAGAACAAAAATATATGGAAATGTGAAAGGCGGTGTCAGTGTGCAAGGCTTTCAAGAAGAAGACTCTGAAAGTTCTCTCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAATGCCCTATATCATGATTCCATCAAAAGAATCAACAAGCCTCTGTTTGCTGATACTTGGGGAATTGAGTTTTGGAAATGTTATTCTTCTGGGAAGGATATTCTTGACACCAGTGGGCTGTCTTCTACAGACGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAGGAGAAAGAAGGTTCATCTTTTAGTAGCCCTTATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAAGTTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATCCTGGGGCATCCCTAGGCCACCAAATTCAAGGTTTGAAGAGCTGTGAACCTGAATTCCTTGTGTCCACGCCTGAGAGACTCTTGGAGCTTGTTGCGATGCAGGCTATTGATATATCTGGTGTTTCGTTGCTGGTCGTCGATGGACTGGAATCTCTTTCAAGAGGTGGTTATCTTGATATGACACAGTCCATCAGGAAGTCCATATCAAGCAAACTGCATACAATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCTGTTGTACAAAGCCTCCTCGGGGGCCCAATTCGAAGACTGTCTCTTAATACTTCTGTGGCCTGTCAAAGTGCCTGCATTATTCAGTCGATAAACTTTTATACTTCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGAATCGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTTTTTATTCTTGGAAAGGAGTGTAATGTTCACGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGACATCGTAGCTGGAGCATTATGTGGTGTCCCAGAAATTAAGAACAATTCGAAAGTAGATGGCAGATTGAGGCCCGTTGTAGCCAAGATTGACATAGAGCAAATTAACACCATAGATCTTGGAAATTATGAAAGCATATTCATACTCTGTGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGACACACGGTCAACGGTGTCTTGCACAGCTTCATCAGCAAGGAAGAAGCATCGGTTGCTGGCTCCTTGGTTGAAATCCTTGAACAATGTGGGCAGGATGTCCCTGAAACTGTAAGAAACTTATCCCTCACACAAGGCTCATCTCAATCTTGA

Protein sequence

MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLPTPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSADTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENALYHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVAKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGSLVEILEQCGQDVPETVRNLSLTQGSSQS
Homology
[Close]
BLAST of HG10004147 vs. NCBI nr
Match: XP_038886801.1 (ATP-dependent RNA helicase DBP3 [Benincasa hispida])

HSP 1 Score: 1026.2 bits (2652), Expect = 1.1e-295
Identity = 533/566 (94.17%), Postives = 546/566 (96.47%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDDVVARK+NKA RKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDVVARKRNKANRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGKKD  KDTKV PSKGSKREFPKEKSTSAPNGTLRDVGREKV+S KEGS 
Sbjct: 61  TPDDPYNDRNGKKDFKKDTKVTPSKGSKREFPKEKSTSAPNGTLRDVGREKVQSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            ++TSGH+AKRSKT  ERTK+Y NVKG  SVQGFQEE+SESS++PSKFL+LCLNAIE+AL
Sbjct: 121 GSLTSGHLAKRSKTSTERTKVYANVKG--SVQGFQEENSESSITPSKFLMLCLNAIEDAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIAR EK
Sbjct: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARTEK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASL HQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLDHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSA IIQSINFYTSEEEKLSKVIQAL+RANG
Sbjct: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSAYIIQSINFYTSEEEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           SQL PQPLKML ILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA
Sbjct: 421 SQLRPQPLKMLLILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           KIDIEQIN+IDLGNYESIFIL AFPPIDKYV ILTGMARHTVNGVLHSFISKEEASVAGS
Sbjct: 481 KIDIEQINSIDLGNYESIFILSAFPPIDKYVWILTGMARHTVNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSS 567
           LVEILEQCGQDVPETVRNL LTQGSS
Sbjct: 541 LVEILEQCGQDVPETVRNLFLTQGSS 564

[Close]
BLAST of HG10004147 vs. NCBI nr
Match: XP_008456577.1 (PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5 [Cucumis melo] >TYK11743.1 pre-mRNA-processing ATP-dependent RNA helicase prp5 [Cucumis melo var. makuwa])

HSP 1 Score: 997.3 bits (2577), Expect = 5.5e-287
Identity = 516/568 (90.85%), Postives = 539/568 (94.89%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD + RK+NKA RKKLRSK+GDSSSVSAR+A+IIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGK    KDTKV PSKGSKREFPKEKSTSAPNGTLRDVGRE  RS KEGS 
Sbjct: 61  TPDDPYNDRNGK----KDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            T+ SG +AKRSKT PERTK +GN KG  SVQGFQEEDSESS++PSKFLILCLNAIENAL
Sbjct: 121 GTLPSGRLAKRSKTDPERTKEFGNAKG--SVQGFQEEDSESSVAPSKFLILCLNAIENAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+K
Sbjct: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSPYLLFLVP QEKATQ+RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLS+GGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFS AYVPV+QSLLGGP+RRLSLNTSVACQSACIIQSINFYTSE+EKLSKVIQAL+RANG
Sbjct: 361 SFSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           S LCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDG+LR VVA
Sbjct: 421 SPLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKLRYVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           K  IEQI+TID+G YESIFIL AFPPIDKYV+ILTGMARHTVNGVLHSFISKEEASVAGS
Sbjct: 481 KTHIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           LVEILEQCGQDVP+TVRNLSLTQG+S S
Sbjct: 541 LVEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]
BLAST of HG10004147 vs. NCBI nr
Match: XP_004138675.1 (pre-mRNA-processing ATP-dependent RNA helicase prp5 [Cucumis sativus])

HSP 1 Score: 986.1 bits (2548), Expect = 1.3e-283
Identity = 512/568 (90.14%), Postives = 534/568 (94.01%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD + RK+NKA+RKKLRSK+GDSS+VSARVA+IIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGK    KDTKV PSK SKREFPKEKSTSAPNGTLRDV  E  RS KEGS 
Sbjct: 61  TPDDPYNDRNGK----KDTKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENARSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            T+ SG +AKRSKT PERTK YGN KG  SVQGFQEEDSESS++PSKFLILCL+AIENAL
Sbjct: 121 GTLPSGRVAKRSKTDPERTKEYGNAKG--SVQGFQEEDSESSVAPSKFLILCLSAIENAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIK INKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK
Sbjct: 181 YHDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSP+LLFLVP QEKATQ+RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFSCAYVP +QSLLGGPIRRLSLNTSVACQSACIIQSINFYTSE+EKLSKVIQAL+RANG
Sbjct: 361 SFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           SQ+ PQPLKMLFILGKECNVH+LAAALK KGHDIVAGALCGVPEIKNN KVDG+LRPVVA
Sbjct: 421 SQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKLRPVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           K DIEQINTIDLG YESIFIL AFPPIDKYV+ILTGMARHT NGVLHSFISKEEASVAGS
Sbjct: 481 KTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           LVEILEQCGQDVP+TVRNLSLTQ +S S
Sbjct: 541 LVEILEQCGQDVPKTVRNLSLTQATSHS 562

[Close]
BLAST of HG10004147 vs. NCBI nr
Match: XP_022993206.1 (ATP-dependent RNA helicase DDX42 [Cucurbita maxima])

HSP 1 Score: 937.6 bits (2422), Expect = 5.2e-269
Identity = 493/569 (86.64%), Postives = 522/569 (91.74%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD +ARK+NKA+RKKLRSKNGDSSSVSARVAAIIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLN-KDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGS 120
           T DDPYNDRNG KDL+ K+TKV PSKGSKREFPK+ S+SAPNGT  D  REKVRS KEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 ADTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENA 180
            D  TSGHIAKRSKT PERTK+  NV+G  SVQ FQEE  +SS+SPSKFLILCLNAIE A
Sbjct: 121 GD-ATSGHIAKRSKTCPERTKVNANVEG--SVQDFQEEGFDSSISPSKFLILCLNAIEKA 180

Query: 181 LYHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240
           LYHDS K IN+PL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE
Sbjct: 181 LYHDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240

Query: 241 KEGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPE 300
           KEG SFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPE
Sbjct: 241 KEGLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPE 300

Query: 301 FLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFS 360
           FLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GG L+M QSIRKSISS L+T VFS
Sbjct: 301 FLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFS 360

Query: 361 DSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRAN 420
           DSFSCAYVPVVQ LL GPI+RLSLNTSVA +SACIIQSINF+TSEEEKLSKVIQAL+RAN
Sbjct: 361 DSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRAN 420

Query: 421 GSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVV 480
           GSQLCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGALCGVPE+KNNS+VD R RPVV
Sbjct: 421 GSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVV 480

Query: 481 AKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAG 540
           AKIDIEQINTIDLGNY+SIFIL AFPPIDKYVQILTGMARHTVNGVLHSFI+KEEAS AG
Sbjct: 481 AKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAG 540

Query: 541 SLVEILEQCGQDVPETVRNLSLTQGSSQS 569
           SLVEILE+CGQ VPETVRNLSLT+ +SQS
Sbjct: 541 SLVEILEECGQAVPETVRNLSLTKATSQS 566

[Close]
BLAST of HG10004147 vs. NCBI nr
Match: XP_023550872.1 (ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 929.9 bits (2402), Expect = 1.1e-266
Identity = 488/563 (86.68%), Postives = 517/563 (91.83%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD +ARK+NK++RKKLRSKNGDSSSVSARVAAIIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKSSRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLN-KDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGS 120
           T DDPYNDRNG KDL+ K++KV PSKGSKREFPK+KS+SAPNGT  D  REKVRS KEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKESKVRPSKGSKREFPKDKSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 ADTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENA 180
            +  TSGHIAKRSKT PERTK+  NV+GG  VQ FQEE  +SS+SPSKFLILCLNAIE A
Sbjct: 121 GN-ATSGHIAKRSKTCPERTKVNVNVEGG--VQNFQEEGFDSSISPSKFLILCLNAIEKA 180

Query: 181 LYHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240
           LYHDS K INKPL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE
Sbjct: 181 LYHDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240

Query: 241 KEGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPE 300
           KEG SFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPE
Sbjct: 241 KEGLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPE 300

Query: 301 FLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFS 360
           FLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GGYL+M QSIRKSISS LHTIVFS
Sbjct: 301 FLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFS 360

Query: 361 DSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRAN 420
           DSFSCAYVPVVQ LL GPI+RLSLNTSVA +SACIIQS+NF TSEEEKLSKVIQAL+RAN
Sbjct: 361 DSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSLNFCTSEEEKLSKVIQALDRAN 420

Query: 421 GSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVV 480
            SQLCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGALCGVPEIKNNS+VD R RPVV
Sbjct: 421 DSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPEIKNNSEVDSRSRPVV 480

Query: 481 AKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAG 540
           AKID+EQINTIDLGNY+SIFIL AFPPIDKYVQILTGMARHTVNGVLH+FI+KEEAS AG
Sbjct: 481 AKIDMEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHTFITKEEASFAG 540

Query: 541 SLVEILEQCGQDVPETVRNLSLT 563
           SLVE+LE+CGQ VPETVRN SLT
Sbjct: 541 SLVELLEECGQAVPETVRNSSLT 560

[Close]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match: O22907 (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-14
Identity = 99/429 (23.08%), Postives = 179/429 (41.72%), Query Frame = 0 

Query: 148 GVSVQGFQEEDSESSLSPSKFLILCLNAIENALYHDSIKRINKPLFADTWGIEFWKCYSS 207
           G+ V GF       +     F    ++AI+   Y        KP       +       S
Sbjct: 215 GIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAY-------EKPTAIQCQALPI---VLS 274

Query: 208 GKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPYLLFLVPTQEKATQVRS 267
           G+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A Q+  
Sbjct: 275 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIFL 334

Query: 268 MCKPL-KALGVHTVSIHPGASLGHQIQGLKS-CEPEFLVSTPERLLELVAMQAIDISGVS 327
             K   KA G+   +++ G S   Q + LK+ C  E +V+TP RL++++ M+A+ +   S
Sbjct: 335 EAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGC--EIVVATPGRLIDMLKMKALTMMRAS 394

Query: 328 LLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPVVQSLLGGPIRRLSL 387
            LV+D  + +   G+    +SI   I     T++FS +       + + +L  PIR    
Sbjct: 395 YLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVG 454

Query: 388 NTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQPLKMLFILGKECNVHEL 447
              +A +   I Q +N   S+ EKL  +++ L              +L    K+  V E+
Sbjct: 455 EVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASKKATVDEI 514

Query: 448 AAALKSKGHDIVA--GALCGVPEIKNNSKVDGRLRPVVAKIDIEQINTIDLGNYESIFIL 507
            A L      + A  G       ++   K    +  V+   D+     +D+ + +++   
Sbjct: 515 EAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKSLKTVVNY 574

Query: 508 CAFPPIDKYVQIL--TGMARHTVNGVLHSFISKEEASVAGSLVEILEQCGQDVPETVRNL 567
                +D +V  +  TG A    +GV ++ +++ EA  AG LV  L   GQ+VP  + +L
Sbjct: 575 DIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDL 616

Query: 568 SLTQGSSQS 569
           ++  G  +S
Sbjct: 635 AMKDGRFKS 616

[Close]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match: Q6CT46 (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-13
Identity = 80/360 (22.22%), Postives = 163/360 (45.28%), Query Frame = 0 

Query: 202 WKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPYLLFLVPTQEKAT 261
           W    +GKD++   G++ T     +     A  I      G   SS  +L + PT+E A+
Sbjct: 123 WPYLLAGKDVI---GIAETGSGKTFAFGVPA--INNIVTSGDKSSSVKVLVISPTRELAS 182

Query: 262 QV-RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPERLLELVAMQAIDIS 321
           Q+  ++     A G+ +  ++ G     Q + L+    + +V+TP RLL+L+   ++D+S
Sbjct: 183 QIYDNLIVLTDACGLRSCCVYGGVPKDQQREDLR--RSQVVVATPGRLLDLIEEGSVDLS 242

Query: 322 GVSLLVVDGLE-SLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPVVQSLLGGPIR 381
            V+ LV+D  +  L +G   D+ + IR++ S+   T++F+ ++      +  S +  P+ 
Sbjct: 243 HVNYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEPV- 302

Query: 382 RLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQPLKMLFILGKECN 441
           ++S+       +   I  I        K  K+++ L + +        + +  +  KE +
Sbjct: 303 KVSIGNRDELSANKRITQIVEVVDPFRKEKKLLELLKKYHSGPTKNDKVLIFALYKKEAS 362

Query: 442 VHELAAALKSKGHDIVA--GALCGVPEIKNNSKVDGRLRPVVAKIDIEQINTIDLGNYES 501
              +   LK  G+D+ A  G L      +  ++       ++   D+     +D+ N ++
Sbjct: 363 --RVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDV-AARGLDIPNVKT 422

Query: 502 IFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGSLVEILEQCGQDVPETVR 558
           +  L     ++ YV  +    R    G  H+  +++E  +AG+LV +L   GQ VPE ++
Sbjct: 423 VINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLNGAGQPVPEELK 471

[Close]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match: Q5VQL1 (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-13
Identity = 75/334 (22.46%), Postives = 151/334 (45.21%), Query Frame = 0 

Query: 235 IARKEKEGSSFSSPYLLFLVPTQEKATQVRSMCKPL-KALGVHTVSIHPGASLGHQIQGL 294
           I  K  + +S   P +L L PT+E ATQ++   K   ++  + +V ++ GA  G Q++ L
Sbjct: 240 ILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDL 299

Query: 295 KSCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKL 354
           +    + +V+TP RL +++ M+ + +  VS LV+D  + +   G+    + I K +  K 
Sbjct: 300 ER-GADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKR 359

Query: 355 HTIVFSDSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEE--KLSKV 414
            T++F+ ++      +   LL  P++    NT     +  I Q ++  T  E+  +L ++
Sbjct: 360 QTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI 419

Query: 415 IQALNRANGSQLCPQPLKMLFILGKECNVHELAAAL-KSKGHDIVAGALCGVPEIKNNSK 474
           +++           +P   + I    C+   +   L ++      A A+ G         
Sbjct: 420 LRS----------QEPGSKIIIF---CSTKRMCDQLARNLARQYGASAIHGDKSQAERDS 479

Query: 475 VDGRLR----PVVAKIDIEQINTIDLGNYESIFILCAFPP-IDKYVQILTGMARHTVNGV 534
           V    R    P++   D+     +D+ +   + +   FP  ++ YV  +    R    GV
Sbjct: 480 VLSEFRSGRCPILVATDV-AARGLDIKDIR-VVVNYDFPTGVEDYVHRIGRTGRAGATGV 539

Query: 535 LHSFISKEEASVAGSLVEILEQCGQDVPETVRNL 560
            ++F   +++  A  LV+ILE   Q V + +R++
Sbjct: 540 AYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 557

[Close]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match: Q54CD6 (Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN=ddx5 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.5e-13
Identity = 55/196 (28.06%), Postives = 97/196 (49.49%), Query Frame = 0 

Query: 202 WKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGSS----------FSSPYLL 261
           W    +G DI+ TS L  + + + ++       +AR ++ G +          ++   +L
Sbjct: 237 WPAILTGHDIIGTS-LPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVL 296

Query: 262 FLVPTQEKATQVRSMCKPLKAL-GVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPERLLE 321
            LVPT+E   QV S    +  L G+ T  I+ G S   QI+ L+  +P+ L+STP RL+E
Sbjct: 297 VLVPTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIE 356

Query: 322 LVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPVV 381
           ++    +D+S V++LV+D  + +   G +   + IR  I      I+FS +F  +   V 
Sbjct: 357 MIENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVS 416

Query: 382 QSLLGGPIRRLSLNTS 387
           +  +  P  RL + +S
Sbjct: 417 KDWIKDPSIRLRIGSS 431

[Close]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match: Q10MH8 (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-12
Identity = 101/444 (22.75%), Postives = 186/444 (41.89%), Query Frame = 0 

Query: 130 KRSKTGPERTKIYGNVKG-GVSVQGFQEEDSESSLSPSKFLILCLNAIENALYHDSIKRI 189
           K S +G    ++   +K   + V GF       S +   F +  +NAI    Y       
Sbjct: 187 KPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGY------- 246

Query: 190 NKPLFADTWGIEFWKCYSSGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGSSFS 249
            KP    T   +      SG+DI+    +G   T   +  ++    D    +++EG    
Sbjct: 247 EKP---TTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG---- 306

Query: 250 SPYLLFLVPTQEKATQVRSMCKPL-KALGVHTVSIHPGASLGHQIQGLKS-CEPEFLVST 309
            P  +   PT+E A Q+    K   K   +   +++ G S   Q + LK+ C  E +++T
Sbjct: 307 -PIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGC--EIVIAT 366

Query: 310 PERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSC 369
           P RL++L+ M+A+ +   + LV+D  + +   G+    +SI   I     T++FS +   
Sbjct: 367 PGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 426

Query: 370 AYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLC 429
               + + +L  PIR       V   +  I Q +N   S+ EK+  +++ L         
Sbjct: 427 KVERLAREILTDPIR--VTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDG-- 486

Query: 430 PQPLKMLFILGKECNVHELAAALKSKGHDIVA--GALCGVPEIKNNSKVDGRLRPVVAKI 489
                +L    K+  V E+ + L  +G  I A  G       ++   K    +  V+   
Sbjct: 487 ----DVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVAT 546

Query: 490 DIEQINTIDLGNYESIFILCAFPPIDKYVQIL--TGMARHTVNGVLHSFISKEEASVAGS 549
           D+     +D+ + +++        +D ++  +  TG A    +G  ++ I+++E   AG 
Sbjct: 547 DV-AARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDK-DGTAYTLITQKEVRFAGE 603

Query: 550 LVEILEQCGQDVPETVRNLSLTQG 565
           LV  L   GQDVP  + +L++  G
Sbjct: 607 LVHCLIAAGQDVPNELMDLAMKDG 603

[Close]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match: A0A5D3CIJ6 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00610 PE=4 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 2.7e-287
Identity = 516/568 (90.85%), Postives = 539/568 (94.89%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD + RK+NKA RKKLRSK+GDSSSVSAR+A+IIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGK    KDTKV PSKGSKREFPKEKSTSAPNGTLRDVGRE  RS KEGS 
Sbjct: 61  TPDDPYNDRNGK----KDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            T+ SG +AKRSKT PERTK +GN KG  SVQGFQEEDSESS++PSKFLILCLNAIENAL
Sbjct: 121 GTLPSGRLAKRSKTDPERTKEFGNAKG--SVQGFQEEDSESSVAPSKFLILCLNAIENAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+K
Sbjct: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSPYLLFLVP QEKATQ+RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLS+GGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFS AYVPV+QSLLGGP+RRLSLNTSVACQSACIIQSINFYTSE+EKLSKVIQAL+RANG
Sbjct: 361 SFSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           S LCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDG+LR VVA
Sbjct: 421 SPLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKLRYVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           K  IEQI+TID+G YESIFIL AFPPIDKYV+ILTGMARHTVNGVLHSFISKEEASVAGS
Sbjct: 481 KTHIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           LVEILEQCGQDVP+TVRNLSLTQG+S S
Sbjct: 541 LVEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match: A0A1S3C3J7 (pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=LOC103496489 PE=4 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 2.7e-287
Identity = 516/568 (90.85%), Postives = 539/568 (94.89%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD + RK+NKA RKKLRSK+GDSSSVSAR+A+IIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGK    KDTKV PSKGSKREFPKEKSTSAPNGTLRDVGRE  RS KEGS 
Sbjct: 61  TPDDPYNDRNGK----KDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            T+ SG +AKRSKT PERTK +GN KG  SVQGFQEEDSESS++PSKFLILCLNAIENAL
Sbjct: 121 GTLPSGRLAKRSKTDPERTKEFGNAKG--SVQGFQEEDSESSVAPSKFLILCLNAIENAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+K
Sbjct: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSPYLLFLVP QEKATQ+RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLS+GGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFS AYVPV+QSLLGGP+RRLSLNTSVACQSACIIQSINFYTSE+EKLSKVIQAL+RANG
Sbjct: 361 SFSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           S LCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDG+LR VVA
Sbjct: 421 SPLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKLRYVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           K  IEQI+TID+G YESIFIL AFPPIDKYV+ILTGMARHTVNGVLHSFISKEEASVAGS
Sbjct: 481 KTHIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           LVEILEQCGQDVP+TVRNLSLTQG+S S
Sbjct: 541 LVEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match: A0A0A0LQJ4 (DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 6.1e-284
Identity = 512/568 (90.14%), Postives = 534/568 (94.01%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD + RK+NKA+RKKLRSK+GDSS+VSARVA+IIAAKKRRMSGKRRQCQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           TPDDPYNDRNGK    KDTKV PSK SKREFPKEKSTSAPNGTLRDV  E  RS KEGS 
Sbjct: 61  TPDDPYNDRNGK----KDTKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENARSSKEGSG 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
            T+ SG +AKRSKT PERTK YGN KG  SVQGFQEEDSESS++PSKFLILCL+AIENAL
Sbjct: 121 GTLPSGRVAKRSKTDPERTKEYGNAKG--SVQGFQEEDSESSVAPSKFLILCLSAIENAL 180

Query: 181 YHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           YHDSIK INKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK
Sbjct: 181 YHDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240

Query: 241 EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300
           EGSSFSSP+LLFLVP QEKATQ+RSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF
Sbjct: 241 EGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 300

Query: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360
           LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD
Sbjct: 301 LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 360

Query: 361 SFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANG 420
           SFSCAYVP +QSLLGGPIRRLSLNTSVACQSACIIQSINFYTSE+EKLSKVIQAL+RANG
Sbjct: 361 SFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 420

Query: 421 SQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVVA 480
           SQ+ PQPLKMLFILGKECNVH+LAAALK KGHDIVAGALCGVPEIKNN KVDG+LRPVVA
Sbjct: 421 SQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKLRPVVA 480

Query: 481 KIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 540
           K DIEQINTIDLG YESIFIL AFPPIDKYV+ILTGMARHT NGVLHSFISKEEASVAGS
Sbjct: 481 KTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEASVAGS 540

Query: 541 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           LVEILEQCGQDVP+TVRNLSLTQ +S S
Sbjct: 541 LVEILEQCGQDVPKTVRNLSLTQATSHS 562

[Close]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match: A0A6J1JVP3 (ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.5e-269
Identity = 493/569 (86.64%), Postives = 522/569 (91.74%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD +ARK+NKA+RKKLRSKNGDSSSVSARVAAIIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLN-KDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGS 120
           T DDPYNDRNG KDL+ K+TKV PSKGSKREFPK+ S+SAPNGT  D  REKVRS KEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 ADTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENA 180
            D  TSGHIAKRSKT PERTK+  NV+G  SVQ FQEE  +SS+SPSKFLILCLNAIE A
Sbjct: 121 GD-ATSGHIAKRSKTCPERTKVNANVEG--SVQDFQEEGFDSSISPSKFLILCLNAIEKA 180

Query: 181 LYHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240
           LYHDS K IN+PL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE
Sbjct: 181 LYHDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240

Query: 241 KEGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPE 300
           KEG SFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPE
Sbjct: 241 KEGLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPE 300

Query: 301 FLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFS 360
           FLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GG L+M QSIRKSISS L+T VFS
Sbjct: 301 FLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFS 360

Query: 361 DSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRAN 420
           DSFSCAYVPVVQ LL GPI+RLSLNTSVA +SACIIQSINF+TSEEEKLSKVIQAL+RAN
Sbjct: 361 DSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRAN 420

Query: 421 GSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVV 480
           GSQLCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGALCGVPE+KNNS+VD R RPVV
Sbjct: 421 GSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVV 480

Query: 481 AKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAG 540
           AKIDIEQINTIDLGNY+SIFIL AFPPIDKYVQILTGMARHTVNGVLHSFI+KEEAS AG
Sbjct: 481 AKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAG 540

Query: 541 SLVEILEQCGQDVPETVRNLSLTQGSSQS 569
           SLVEILE+CGQ VPETVRNLSLT+ +SQS
Sbjct: 541 SLVEILEECGQAVPETVRNLSLTKATSQS 566

[Close]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match: A0A6J1FKA1 (ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.2e-266
Identity = 492/569 (86.47%), Postives = 517/569 (90.86%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD +ARK+NKA+RKKLRSKNGDSSSVSARVAAIIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TPDDPYNDRNGKKDLN-KDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGS 120
           T DDPYNDRNG KDL+ K+TKV PSKGSKREFPK+KS+SAPN T  D  REKVRS KEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVTPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 ADTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENA 180
            D  TSGHIAKRSKT PERTK+  N +GG  VQ FQEE  +SS+SPSKFLILCLNAIE A
Sbjct: 121 GD-ATSGHIAKRSKTCPERTKVNANGEGG--VQDFQEEGFDSSISPSKFLILCLNAIEKA 180

Query: 181 LYHDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240
           LYHDS K INKPL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE
Sbjct: 181 LYHDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 240

Query: 241 KEGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPE 300
           KEG SFSSPYLLFLVPTQEKAT VRSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPE
Sbjct: 241 KEGLSFSSPYLLFLVPTQEKATHVRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPE 300

Query: 301 FLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFS 360
           FLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GGYL+M QSIRKSISS LHTIVFS
Sbjct: 301 FLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFS 360

Query: 361 DSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRAN 420
           DSFSCAYVPVVQ LL GPI+RLSLN SVA +SACIIQSINF TSEE KLSKVIQAL+RAN
Sbjct: 361 DSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEGKLSKVIQALDRAN 420

Query: 421 GSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGRLRPVV 480
           GSQLCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGAL GVPEIKNNS+VD R RPVV
Sbjct: 421 GSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRWRPVV 480

Query: 481 AKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISKEEASVAG 540
           AKID+EQINTIDLGNY+SIFIL AFP IDKYVQILTGMARHTVNGVLH+FI+KEEAS AG
Sbjct: 481 AKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAG 540

Query: 541 SLVEILEQCGQDVPETVRNLSLTQGSSQS 569
           SLVEILE+CGQ VPETVRNLSLTQ +SQS
Sbjct: 541 SLVEILEECGQAVPETVRNLSLTQATSQS 566

[Close]
BLAST of HG10004147 vs. TAIR 10
Match: AT2G28600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 1.0e-126
Identity = 263/571 (46.06%), Postives = 367/571 (64.27%), Query Frame = 0 

Query: 1   MAKGDDVVARKKNKATRKKLRSKNGDSSSVSARVAAIIAAKKRRMSGKRRQCQGMCFSLP 60
           MAKGDD V RKKNK TRKK+  KN D+++VSAR+AAIIAAKKRR SGKR  CQGMCF+LP
Sbjct: 1   MAKGDDNVQRKKNKVTRKKMSRKN-DTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLP 60

Query: 61  TPDDPYNDRNGKKDLNKDTKVAPSKGSKREFPKEKSTSAPNGTLRDVGREKVRSLKEGSA 120
           T +DP+N+R GK D+ K  K                            ++KV+S ++   
Sbjct: 61  TLEDPFNERQGKADITKKKK---------------------------KKKKVKSRED--- 120

Query: 121 DTVTSGHIAKRSKTGPERTKIYGNVKGGVSVQGFQEEDSESSLSPSKFLILCLNAIENAL 180
                       K  P            +S++G ++ D      P KFL+L LN IE++ 
Sbjct: 121 -----------KKPSP------------MSIEGVEKMD-----GPPKFLMLNLNEIESSF 180

Query: 181 YHDSI--KRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK 240
             D    ++ +K LF  +WGIEFWKCYSSG DILDTSG+SST E+IAW+VS+AAD+IAR+
Sbjct: 181 RKDITYSEQHDKSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIVSTAADAIARR 240

Query: 241 EK------EGSSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHPGASLGHQIQG 300
           EK      E    +SP+LL+LVP+Q KA+QVRS+CK LK +G+HTVS+H GA L HQI G
Sbjct: 241 EKDEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISG 300

Query: 301 LKSCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSK 360
           LKS EPEF+V+TPERLLE+V ++ +DIS VSLLV+D L SL  GGYL+  +SI+++ISSK
Sbjct: 301 LKSVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSK 360

Query: 361 LHTIVFSDSFSCAYVPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVI 420
             TIVF++SFS + +P VQS LGG + R+++N SVA Q +CI Q+++   SEE+KL K  
Sbjct: 361 HQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFA 420

Query: 421 QALNRANGSQLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVD 480
           + L+ ++         K+++I+ KE +  ++ A LK KG  +   +   + E+K + K  
Sbjct: 421 KHLDSSSS--------KLIYIVTKEESFKKIMAILKLKGISVSTSSDSKLSEVKKSRK-- 480

Query: 481 GRLRPVVAKIDIEQINTIDLGNYESIFILCAFPPIDKYVQILTGMARHTVNGVLHSFISK 540
               PV   ID EQ++T  + + E++ +   FP I+ Y QILT MAR + +GVLHS+I++
Sbjct: 481 ----PVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITE 498

Query: 541 EEAS--VAGSLVEILEQCGQDVPETVRNLSL 562
           ++A+   AG LV +LE CGQ+VP+  RN+ +
Sbjct: 541 KDAASYQAGPLVNVLENCGQNVPDRWRNMDV 498

[Close]
BLAST of HG10004147 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-15
Identity = 99/429 (23.08%), Postives = 179/429 (41.72%), Query Frame = 0 

Query: 148 GVSVQGFQEEDSESSLSPSKFLILCLNAIENALYHDSIKRINKPLFADTWGIEFWKCYSS 207
           G+ V GF       +     F    ++AI+   Y        KP       +       S
Sbjct: 215 GIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAY-------EKPTAIQCQALPI---VLS 274

Query: 208 GKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPYLLFLVPTQEKATQVRS 267
           G+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A Q+  
Sbjct: 275 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIFL 334

Query: 268 MCKPL-KALGVHTVSIHPGASLGHQIQGLKS-CEPEFLVSTPERLLELVAMQAIDISGVS 327
             K   KA G+   +++ G S   Q + LK+ C  E +V+TP RL++++ M+A+ +   S
Sbjct: 335 EAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGC--EIVVATPGRLIDMLKMKALTMMRAS 394

Query: 328 LLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPVVQSLLGGPIRRLSL 387
            LV+D  + +   G+    +SI   I     T++FS +       + + +L  PIR    
Sbjct: 395 YLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVG 454

Query: 388 NTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQPLKMLFILGKECNVHEL 447
              +A +   I Q +N   S+ EKL  +++ L              +L    K+  V E+
Sbjct: 455 EVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASKKATVDEI 514

Query: 448 AAALKSKGHDIVA--GALCGVPEIKNNSKVDGRLRPVVAKIDIEQINTIDLGNYESIFIL 507
            A L      + A  G       ++   K    +  V+   D+     +D+ + +++   
Sbjct: 515 EAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKSLKTVVNY 574

Query: 508 CAFPPIDKYVQIL--TGMARHTVNGVLHSFISKEEASVAGSLVEILEQCGQDVPETVRNL 567
                +D +V  +  TG A    +GV ++ +++ EA  AG LV  L   GQ+VP  + +L
Sbjct: 575 DIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDL 616

Query: 568 SLTQGSSQS 569
           ++  G  +S
Sbjct: 635 AMKDGRFKS 616

[Close]
BLAST of HG10004147 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 84/385 (21.82%), Postives = 170/385 (44.16%), Query Frame = 0 

Query: 191 PLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPYL 250
           P+ A TW I         +DI+  +   S  + + +++ +    I  +     S + P +
Sbjct: 460 PIQAQTWPIAL-----QSRDIVAIAKTGS-GKTLGYLIPA---FILLRHCRNDSRNGPTV 519

Query: 251 LFLVPTQEKATQVRSMCKPL-KALGVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPERLL 310
           L L PT+E ATQ++       ++  +    ++ GA  G Q++ L+    + +V+TP RL 
Sbjct: 520 LILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELER-GADIVVATPGRLN 579

Query: 311 ELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPV 370
           +++ M+ ID   VSLLV+D  + +   G+    + I   I  +  T++++ ++      +
Sbjct: 580 DILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKI 639

Query: 371 VQSLLGGPIRRLSLNTSVACQSACIIQSINF--YTSEEEKLSKVIQALNRANGSQLCPQP 430
              LL  P++           +  I Q +       +E +L +++++  R  GS++    
Sbjct: 640 ASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQER--GSKV---- 699

Query: 431 LKMLFILGKECNVHELAAALKSKGHDIVAG-ALCGVPEIKNNSKVDGRLRPVVAK----- 490
             ++F   K    H   +  +  G  ++ G    G  +   N    G+   ++A      
Sbjct: 700 --IIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAAR 759

Query: 491 -IDIEQINTIDLGNYESIFILCAFPP-IDKYVQILTGMARHTVNGVLHSFISKEEASVAG 550
            +DI+ I  +   NY+       FP  ++ YV  +    R    GV  +F ++++   A 
Sbjct: 760 GLDIKDIRVVI--NYD-------FPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAP 817

Query: 551 SLVEILEQCGQDVPETVRNLSLTQG 565
            L+++LE   Q VP  VR++++  G
Sbjct: 820 DLIKVLEGANQQVPPQVRDIAMRGG 817

[Close]
BLAST of HG10004147 vs. TAIR 10
Match: AT5G14610.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 66.2 bits (160), Expect = 9.4e-11
Identity = 75/328 (22.87%), Postives = 143/328 (43.60%), Query Frame = 0 

Query: 248 PYLLFLVPTQEKATQVR-SMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPE 307
           P +L L PT+E ATQ++    K  K+  +    ++ GA  G Q++ ++    + +V+TP 
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIER-GVDIVVATPG 361

Query: 308 RLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAY 367
           RL +++ M+ I +  VS LV+D  + +   G+    + I   + +K  T++++ ++    
Sbjct: 362 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 421

Query: 368 VPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQ 427
             +   LL  P +    N      +  I Q+I    +  EK S++ Q L          +
Sbjct: 422 RKIAADLLVNPAQVNIGNVDELVANKSITQTIE-VLAPMEKHSRLEQILR-------SQE 481

Query: 428 PLKMLFILGKECNVHELAAAL-KSKGHDIVAGALCGVPEIKNNSKVDGRLR----PVVAK 487
           P   + I    C+   +   L ++      A A+ G         V  + R    PV+  
Sbjct: 482 PGSKIIIF---CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVA 541

Query: 488 IDIEQINTIDLGNYESIFILCAFP-PIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 547
            D+     +D+ +   + +   FP  ++ YV  +    R    G+ ++F   ++A  A  
Sbjct: 542 TDV-AARGLDVKDIR-VVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASD 601

Query: 548 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           L++ILE   Q VP  VR ++   G   +
Sbjct: 602 LIKILEGANQKVPPQVREMATRGGGGMN 615

[Close]
BLAST of HG10004147 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 66.2 bits (160), Expect = 9.4e-11
Identity = 75/328 (22.87%), Postives = 143/328 (43.60%), Query Frame = 0 

Query: 248 PYLLFLVPTQEKATQVR-SMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFLVSTPE 307
           P +L L PT+E ATQ++    K  K+  +    ++ GA  G Q++ ++    + +V+TP 
Sbjct: 234 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIER-GVDIVVATPG 293

Query: 308 RLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDSFSCAY 367
           RL +++ M+ I +  VS LV+D  + +   G+    + I   + +K  T++++ ++    
Sbjct: 294 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 353

Query: 368 VPVVQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEEEKLSKVIQALNRANGSQLCPQ 427
             +   LL  P +    N      +  I Q+I    +  EK S++ Q L          +
Sbjct: 354 RKIAADLLVNPAQVNIGNVDELVANKSITQTIE-VLAPMEKHSRLEQILR-------SQE 413

Query: 428 PLKMLFILGKECNVHELAAAL-KSKGHDIVAGALCGVPEIKNNSKVDGRLR----PVVAK 487
           P   + I    C+   +   L ++      A A+ G         V  + R    PV+  
Sbjct: 414 PGSKIIIF---CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVA 473

Query: 488 IDIEQINTIDLGNYESIFILCAFP-PIDKYVQILTGMARHTVNGVLHSFISKEEASVAGS 547
            D+     +D+ +   + +   FP  ++ YV  +    R    G+ ++F   ++A  A  
Sbjct: 474 TDV-AARGLDVKDIR-VVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASD 533

Query: 548 LVEILEQCGQDVPETVRNLSLTQGSSQS 569
           L++ILE   Q VP  VR ++   G   +
Sbjct: 534 LIKILEGANQKVPPQVREMATRGGGGMN 547

The following BLAST results are available for this feature:
BLAST of HG10004147 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886801.11.1e-29594.17ATP-dependent RNA helicase DBP3 [Benincasa hispida][more]
XP_008456577.15.5e-28790.85PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5 [Cucumis melo] >T... [more]
XP_004138675.11.3e-28390.14pre-mRNA-processing ATP-dependent RNA helicase prp5 [Cucumis sativus][more]
XP_022993206.15.2e-26986.64ATP-dependent RNA helicase DDX42 [Cucurbita maxima][more]
XP_023550872.11.1e-26686.68ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo][more]
BLAST of HG10004147 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O229074.0e-1423.08DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 P... [more]
Q6CT462.0e-1322.22ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ... [more]
Q5VQL12.0e-1322.46DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q54CD67.5e-1328.06Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN... [more]
Q10MH81.7e-1222.75DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of HG10004147 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CIJ62.7e-28790.85Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa ... [more]
A0A1S3C3J72.7e-28790.85pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0LQJ46.1e-28490.14DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 S... [more]
A0A6J1JVP32.5e-26986.64ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=... [more]
A0A6J1FKA11.2e-26686.47ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 P... [more]
BLAST of HG10004147 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28600.11.0e-12646.06P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT2G47330.12.8e-1523.08P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT3G06480.11.7e-1221.82DEAD box RNA helicase family protein [more]
AT5G14610.19.4e-1122.87DEAD box RNA helicase family protein [more]
AT5G14610.29.4e-1122.87DEAD box RNA helicase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 238..385
e-value: 9.2E-20
score: 72.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 244..379
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 243..359
e-value: 1.3E-11
score: 44.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..95
NoneNo IPR availablePANTHERPTHR47958:SF8ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1coord: 1..559
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 1..559

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004147.1HG10004147.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0015276 ligand-gated ion channel activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0038023 signaling receptor activity
molecular_function GO:0003676 nucleic acid binding