HG10004091 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004091
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PolyA_pol domain-containing protein
Location	Chr08: 13606692 .. 13612373 (-)
RNA-Seq Expression	HG10004091
Synteny	HG10004091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCTCAATCTCTTCCCCGAAACCACTGGTTCAAGTCAAGGACACCATCGAACTCACTGAAATCGAGGAGAAGATTTTTCATAGGCTTCTCGGGACTCTTCGTCACTTCAATCTCCAAACCCAGCTTCGTGTTGCCGGCGGTTGGGTTCGCGATAAGGTCACTTTCTCTTTCTCTCTTGCACTGAGATTGTGTTAGTTATTGTTTGCTTGCTTTTGATGGGCTAGAATTTAGGAACTATTTCGTGGGGTTTTGGAGATTTCTTTAATTTCATCGGGGTTTTTGATGATTTTTTTATGGGTTTTTGTTTCTACAGCTTCTCGGCAAAGATTGTTACGACATTGATATCGCTCTAGACAATATGTTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAAGCGCAAGGAGTCGCTGTTATTCCATGGTATGAGAATCATGTGTATTTGCATAGTTATATGCTAATGCAGAGGAGTATTGAAGAGAATATAGAGTGGAAAGTTGGATTCTTATGAATATAGACTGTGTACTCGCATAGTTCTTTCTGAGATTTTGGATTCTTTTGAACAGTTTGGAAGCGATTGCTAACTTCTAATTATATTTTTCCAGTAACCCTGACCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTAAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGTATTCCTACTAAGGTATGTAGTAGTTTGCTGTTTTGCACGTACAGTCTCATTAATTTCCACGTTCACATGTTGTTTTTAATAGGGAAATTTCAGCTGTCCTTAGATTATAGTTATATGTTGGAGTTTTAGCAGGCAACGACCTGGGAGATCAATGCCCTAAAATGTCAAACATTGTAGGATGAAGAGCTTTTTAGCTTTTGGATCATGTATTTTTCCCCTTTATTTGTGAATATTTGCTCTTATGGAGATAAAAGTTTCTACTTAGACTGTAAGAAATGGTGTACTTTTTGGCCGTAGATGACTGGTTATGTTATATGCATGGTGGTTAATCGCATACTTGATTTTACAGCAAAAGTTTGGGACGGCAGAAGAGGATGCGTATAGAAGGGATTTAACAATCAATAGGTATATTTTTCTTTATCACATAGCCTGCCCATTTATGATATTATATTCCCTCAAGATTATATACATATATTTCTTGTTATATTAACGTGGTTTTTTTCGCTTCCTGAAAGCTTGTTCTACAATATCAACTTGAGCATAGTTGAAGATTTTACAAAAAGAGGTTTGTATTAATTTACTTTCATTTGCAATCCAAGTCTAGAACTGATTTATTTCACTTTTCTAAAAAAGAAACAAACCTTCATTTCTTATCGCAAAATAATTCTAAGAGATGAAATGGGCTAGCTATTTAATGCATAAAAGGATGGATTGTGTATTACAAAATTCCTTGATAATTGAGGTCTGAAAAGAGTACTAGTTGTTCATTTTCTATATTTATCCACTCCTTTTACGACCTTGCACTGCAGGCATTTCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTGCTAAAGCTACATTTATGGATGATCCACTTCGAGTCCTTCGAGCCATACGTTTCTGTATGTTTGTATTTATTTCTTTGTCTTACTAGTTATGTGAGCCTTGCATCTGATCTTATGTTTTTTTCTCTCCTTCTATGTTCATGGGTAAACTGGCATTGGTCTTGAACTCTAATCTTTTAAGGGGCATGACCTACTTGTATTTTCTGTTTGTTGATACTATCATTCCCTTGAAGGCATGACTTACTTGAAACAATACCAACATATGGAAACTAATATAATATGTCTCTTAAAACCATCATCATCATCTTCTTCTTCTTCTCTCTCCTTTTTGTTTCTTTCTTTTTTTTTTTTAATAGAAACTGTATATATCTTTTTAAACTTGATATTGTTGTAATTGATAATGATATAAGATATTAAGTTATTTATTCCAATCATGTAAATCTTTATCATCCGTAATTCTAATTATTGGGTTTTCATTTGGTTTAGGGCTTATTTTCTCTCACAAGCTAGCTTAGGATTGTAATTGTTAAATAGTAGGTAATTATCACATCAACTTGAGCATAGCTCAAAACAAAAAAAAGAGGAGAGTAGAAAAATCACTCTTCTTGGTCTTGTTGGTACTTTTTCCTTGTTTACCTTCACTTTTATTTACTTCTCCTTCCCTAAATTTCTATTGTTTCTAAGGTGTTTTTCATTTTCTTGGTCTTAGAGTGAGATTTATTTTCGTTATGTGCTACTTTTTACTCCTTCTACTGTCTCTTTATATCTCTTCAGTGTCGTGCACTTGCCAAGTTTCCATTCTCTTATTACCCACACCATTCATCTCATAATATTGTTCACTGGAAAAGGAGAGCATATGCTTTCTGAACCAAGCTCTGTATTTACACTTGATCTTAATGGTGCGTTTGCATAATTTATTATTTCAGGTGCAAGATTTGAATTCACATTGGACGAAGAACTGAAAGAAGCTGCAGCATGTGAAGAAGTAAAGGCTGCTCTTGCTGCAAAGATTAGCAGAGAACGTATTGGAGTTGAAGTACGTTTAATATTGAATATCACATGTTCTGTTTCTCTCATAAATGATTTAAGTACATCATATATTTTTTTTAATCCAGTAAACCTACTCTATTTTAGTGGTTCGATGATGTTTATGATTATTGATCAAATAGTTTCTTCTCTTTCTTGGTTTTATGTAGATTGATCTCATGATTTCTGGGAATCAGCCAGTTAAAGCAATGGGCTACATTTGTGATTTGACTTTATTTTGGACCGTCTTTACTCTTCCTTCTAACACTGAACCTGAAATATCTGAGGTGTGTAATAGGTACGATTAGTTCATCTTGCCAAAAAGGTGCTTTCGTAGTTTGCCAAAATACATAATATTGTGAAGGGTTCGAGAAGTTGGAGAACAAACACTCTCGGTTCTATCACCCCATACTCGATATTATAATTATTCTTCAGAACAAGAAAATTGAGACAAACCAATGCTTCTTATTTAATGAATATATACAGTTCTACCATATTCCTTATGGTTCATCCTAAAAAACTTGGTCTCTGTCTCTCTCTCTCTCATGTTTTTGGGTTACCCATTTTTTAGGCTTTGCATTGCTTGTGTAGATGCCACGTGGAACCTCATTCCACACATCAAATGCTTTACCTTTAATGTAAGTGAAAGTCCCATTAGAGTTTATATGTCCTTGCAGTTTCTTCCTTGATGGTTTTATTTTTTGTATGCATAAATTAATTATCGGTATTTATTTATTTGTTTCTTTTATGCCCTTGGTACTGTTTTTATTTTACTTATGGTGTTCTGTAACTTATGAGTTTTAGGACGAACAGAAAAGACTCTCTATGTATGCTTCTCTCTTCCTTCCATTCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGGTATTTGTCTAAAGTCATTCTGGTATTTAACGTTTCCTCTCATGTTGTAATGTATGTCTAAGATATTCTTGTCTGCTTCAAACTCCGAATCTTCTGCCCTACAGATTCCTGTTGTCAACTATATTTTCCGGGATTCTCTCAAGAGAAAAGTTAGCGATGCTGAAACAGTTAGTTATACTCTGACTTAGTTTGTTCTTTGCGATTATATATATATACACATATATAATATATATGTATGTATGCATACATACATACATATATATATATCCAAATTCACACGGTTCCACGGATTTTTGACTCTGCAGAGATTGTTTAACAGATTACATCTTTCCCATATAGGTTGTTAACGTACATCAGGCTTTGGAGAAATTTTTGTCCTTGATTCCTCTTCTTGTATCTAAAGAGGAAATTCAACCCAATGGACTTGATTGGGGTGTTGATTGTGCAGATGTTCCTGTTACGTCAAGGATTCGAGTATTGACGGGTACTTTATAAAACTTTATATAAAAAAAATTATAGCAATGCACAATTAAGAAACAGTTTGTTTGATATCTATGAAAGAAAATTTAGCCATTGCCATGATTATATAATGTAGATTCATAATGAGCTCCTTTTTTTTTTGTTTAGAAATTATCATAATTTTATTTTCCCCTCTATTCATTCATCGTATGCAGTATCCTTCTCCATTGCATGCATCGGTCAGGTTAACGAAGGCTTTAAGAATAGATGACCAATTTTAATGTAATTCTTAGGAATTTTCTGATAGCAGGGCTAGGTCGTATGTTTTATTTTATCTTTGGATACCTCCTAACTAGAATAAGATCTGAAATATATTGAAATATAAAAGATGAAGAACTACAAGATAATCCAAGTACGACACTTAGAACCTCTCCCCTTGAGTATGCTAACCCAAGCTCTAGATCACTCAACAATTGTCTACCTTTCCTCACTCACCCTCCTATTTATAACAAAATACACCAACTCCCTAACTAATTACCCTTATGCCCTTACTAATATCATACTAATATTCCTAACTAAGTACCTTACATTTTTTTATTCTTTTTCTTAGTAAGTCAACGCAGAAAATCCTTGTCGAGTTGGATAATTAGTTTTGTATCTGGAGGTTTTTTTTCCCCTCCCATTTTGATGGATGAAACATCTGTCGTAATGTATGTATATGCTCACATGTTGAAAGACTAATCATCGTTGGAAGAAAATACAGAATCTTTCAGAACTATATATTTGGAGAGGGGTGAATTTACAAAATTGGAGAATAAATTATAGGTTATCTATAATAATCAGATAAATGCAAGAATAGCTTGTGTCTTAGATGAATGATCGTGGAACTTTTAAGGTTACCTCAACGATCTACTTCTAATCCCTTGATTGAATTTTCTGTTGGCCTCTCCTAAATTTTCTATTGATCATAATTTTGTCCCAATTACGGGGGGAATAACTTGATCCATTTCTTTGTTTTTGTTGACACATTTTTCTTCTTTGCAGGGCTTCTTTTGCGGGAAATTAAAGACTTTTGGCCTGTTGCTTTATTGATGGCCACCTTGTTATATCCTGCTAGTGTAGATTATACACAAGATCTGTTAAACAGACACTTCGAACTGGAAAAGCGAAAAGAACTGTTTGACGTCGTTTACAACGAGATTGTTAAATTAGGTATAAACCCAAAAGCTGCTCAGCGAAGCATTATGAAAACAATGCGTTTCCTCGTTCAATCTTTGGCCTCTAACCCTTCTCCTCGGGCACGGCCATGTTTTCAGGTCTGGAAAATGTGTGGGAGGTGAAACCTCTGGTGAACGGGAAGGAGATTATGAACATTCTGCAGCTGAAAGCAGGAGGGCCACTTGTAAGAGAATGGGTGAGTGGATTTTCAAGTAAAGGCCAAGGATTACAATTCCGATATGTCGATATTTCAATAACATGCAAAATGAAGGATTTGACACTGATATTAAGGGATCAATCAATATTTCTAATATATAAATAACTGTCAAGAAAATATTACTGACATGAAACCGAAGCGACTTTCTCATACTGATTTTTTACGTGTATTCTGCAGCAACAAAAAATACTTGCATGGCAGCTTGCACACCCCTCAGCAACATCCGAAGAATGCATCGATTGGATTCGGGAAATGAATTCGAAGCGTGTGAAGTTGGATGAATGA

mRNA sequence

ATGGCCACCTCAATCTCTTCCCCGAAACCACTGGTTCAAGTCAAGGACACCATCGAACTCACTGAAATCGAGGAGAAGATTTTTCATAGGCTTCTCGGGACTCTTCGTCACTTCAATCTCCAAACCCAGCTTCGTGTTGCCGGCGGTTGGGTTCGCGATAAGCTTCTCGGCAAAGATTGTTACGACATTGATATCGCTCTAGACAATATGTTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAAGCGCAAGGAGTCGCTGTTATTCCATGTAACCCTGACCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTAAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGTATTCCTACTAAGCAAAAGTTTGGGACGGCAGAAGAGGATGCGTATAGAAGGGATTTAACAATCAATAGCTTGTTCTACAATATCAACTTGAGCATAGTTGAAGATTTTACAAAAAGAGGCATTTCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTGCTAAAGCTACATTTATGGATGATCCACTTCGAGTCCTTCGAGCCATACGTTTCTGTGCAAGATTTGAATTCACATTGGACGAAGAACTGAAAGAAGCTGCAGCATGTGAAGAAGTAAAGGCTGCTCTTGCTGCAAAGATTAGCAGAGAACGTATTGGAGTTGAAATTGATCTCATGATTTCTGGGAATCAGCCAGTTAAAGCAATGGGCTACATTTGTGATTTGACTTTATTTTGGACCGTCTTTACTCTTCCTTCTAACACTGAACCTGAAATATCTGAGGACGAACAGAAAAGACTCTCTATGTATGCTTCTCTCTTCCTTCCATTCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGGTTGTTAACGTACATCAGGCTTTGGAGAAATTTTTGTCCTTGATTCCTCTTCTTGTATCTAAAGAGGAAATTCAACCCAATGGACTTGATTGGGGTGTTGATTGTGCAGATGTTCCTGTTACGTCAAGGATTCGAGTATTGACGGGGCTTCTTTTGCGGGAAATTAAAGACTTTTGGCCTGTTGCTTTATTGATGGCCACCTTGTTATATCCTGCTAGTGTAGATTATACACAAGATCTGTTAAACAGACACTTCGAACTGGAAAAGCGAAAAGAACTGTTTGACGTCGTTTACAACGAGATTGTTAAATTAGGTCTGGAAAATGTGTGGGAGGTGAAACCTCTGGTGAACGGGAAGGAGATTATGAACATTCTGCAGCTGAAAGCAGGAGGGCCACTTGTAAGAGAATGGCAACAAAAAATACTTGCATGGCAGCTTGCACACCCCTCAGCAACATCCGAAGAATGCATCGATTGGATTCGGGAAATGAATTCGAAGCGTGTGAAGTTGGATGAATGA

Coding sequence (CDS)

ATGGCCACCTCAATCTCTTCCCCGAAACCACTGGTTCAAGTCAAGGACACCATCGAACTCACTGAAATCGAGGAGAAGATTTTTCATAGGCTTCTCGGGACTCTTCGTCACTTCAATCTCCAAACCCAGCTTCGTGTTGCCGGCGGTTGGGTTCGCGATAAGCTTCTCGGCAAAGATTGTTACGACATTGATATCGCTCTAGACAATATGTTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAAGCGCAAGGAGTCGCTGTTATTCCATGTAACCCTGACCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTAAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGTATTCCTACTAAGCAAAAGTTTGGGACGGCAGAAGAGGATGCGTATAGAAGGGATTTAACAATCAATAGCTTGTTCTACAATATCAACTTGAGCATAGTTGAAGATTTTACAAAAAGAGGCATTTCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTGCTAAAGCTACATTTATGGATGATCCACTTCGAGTCCTTCGAGCCATACGTTTCTGTGCAAGATTTGAATTCACATTGGACGAAGAACTGAAAGAAGCTGCAGCATGTGAAGAAGTAAAGGCTGCTCTTGCTGCAAAGATTAGCAGAGAACGTATTGGAGTTGAAATTGATCTCATGATTTCTGGGAATCAGCCAGTTAAAGCAATGGGCTACATTTGTGATTTGACTTTATTTTGGACCGTCTTTACTCTTCCTTCTAACACTGAACCTGAAATATCTGAGGACGAACAGAAAAGACTCTCTATGTATGCTTCTCTCTTCCTTCCATTCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGGTTGTTAACGTACATCAGGCTTTGGAGAAATTTTTGTCCTTGATTCCTCTTCTTGTATCTAAAGAGGAAATTCAACCCAATGGACTTGATTGGGGTGTTGATTGTGCAGATGTTCCTGTTACGTCAAGGATTCGAGTATTGACGGGGCTTCTTTTGCGGGAAATTAAAGACTTTTGGCCTGTTGCTTTATTGATGGCCACCTTGTTATATCCTGCTAGTGTAGATTATACACAAGATCTGTTAAACAGACACTTCGAACTGGAAAAGCGAAAAGAACTGTTTGACGTCGTTTACAACGAGATTGTTAAATTAGGTCTGGAAAATGTGTGGGAGGTGAAACCTCTGGTGAACGGGAAGGAGATTATGAACATTCTGCAGCTGAAAGCAGGAGGGCCACTTGTAAGAGAATGGCAACAAAAAATACTTGCATGGCAGCTTGCACACCCCTCAGCAACATCCGAAGAATGCATCGATTGGATTCGGGAAATGAATTCGAAGCGTGTGAAGTTGGATGAATGA

Protein sequence

MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISEDEQKRLSMYASLFLPFRKFTFKDKKSKKVVNVHQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALLMATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNILQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE

Homology

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BLAST of HG10004091 vs. NCBI nr
Match: XP_038886744.1 (tRNA nucleotidyltransferase cca2 [Benincasa hispida])

HSP 1 Score: 906.0 bits (2340), Expect = 1.4e-259
Identity = 465/528 (88.07%), Postives = 472/528 (89.39%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MATSISSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 53  MATSISSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 112

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF
Sbjct: 113 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 172

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIP KQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRG+SDLKFG
Sbjct: 173 VNLRCEEYSENSRIPAKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGLSDLKFG 232

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 233 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 292

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YICDLTLFWTVFTLP+NTEPEISE                   
Sbjct: 293 VEIDLMIAGNQPVKAMSYICDLTLFWTVFTLPANTEPEISEVCNSLCIACLDATWNLIQL 352

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLSMYASLFLPFRKFTFKDKKSKK                     VVNV
Sbjct: 353 IKCFTFNDEQKRLSMYASLFLPFRKFTFKDKKSKKVPVVNYIFRDSLKRKVSDADTVVNV 412

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQALEKFLSLIP LVSKEEIQPNGLDWGV C DVPVTSRIRVLTGLLLREIKDFWPVALL
Sbjct: 413 HQALEKFLSLIP-LVSKEEIQPNGLDWGVGCEDVPVTSRIRVLTGLLLREIKDFWPVALL 472

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDYTQDLLNRH+ELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI
Sbjct: 473 MATLLYPANVDYTQDLLNRHYELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 532

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLA PS TSEEC+DWIREM+SKRVKLDE
Sbjct: 533 LQLKAGGPLVREWQQKILAWQLARPSGTSEECLDWIREMHSKRVKLDE 579

[Close]

BLAST of HG10004091 vs. NCBI nr
Match: XP_004140936.3 (tRNA nucleotidyltransferase cca2 [Cucumis sativus] >KAE8646654.1 hypothetical protein Csa_004788 [Cucumis sativus])

HSP 1 Score: 901.0 bits (2327), Expect = 4.5e-258
Identity = 460/528 (87.12%), Postives = 469/528 (88.83%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           M T+ISSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 50  MTTAISSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 109

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 110 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 169

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG
Sbjct: 170 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 229

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 230 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 289

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YI DLTLFWTVFTLPSN EPEISE                   
Sbjct: 290 VEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQH 349

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLS+YASLFLPFRKFTFKDKKSKK                     VVNV
Sbjct: 350 INCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNV 409

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQALEKFLSLIPLLVSKEEIQPNG+DWGV+CADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 410 HQALEKFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA VDY QDLLNRHFELEKRKELFD VYNEIVKLGLENVWE+KPLVNGKEIMNI
Sbjct: 470 MATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNI 529

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLAHPS TSEEC+DWIRE +SKRVKLDE
Sbjct: 530 LQLKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVKLDE 577

[Close]

BLAST of HG10004091 vs. NCBI nr
Match: XP_008456683.1 (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Cucumis melo] >KAA0031671.1 putative CCA tRNA nucleotidyltransferase 2 [Cucumis melo var. makuwa] >TYK04440.1 putative CCA tRNA nucleotidyltransferase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 897.1 bits (2317), Expect = 6.5e-257
Identity = 457/528 (86.55%), Postives = 469/528 (88.83%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MAT++SSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 50  MATAMSSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 109

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 110 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 169

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSEN RIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG
Sbjct: 170 VNLRCEEYSENRRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 229

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 230 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 289

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YI DLTLFWTVFTLPSNTEPEISE                   
Sbjct: 290 VEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNTEPEISEVCNRLCIACLDATWNLIQH 349

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLS+YASLFLPFRKFTFKDKKSKK                     VVNV
Sbjct: 350 INCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPVVNYIFRDSLKRKVSDAETVVNV 409

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQ LEKFLSLIPLLVSKEEIQPNG DWGV+CADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 410 HQTLEKFLSLIPLLVSKEEIQPNGFDWGVECADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDY QDLLN++FELEKRKELFDV+YNE VKLGLENVWE+KPLVNGKEIMNI
Sbjct: 470 MATLLYPANVDYAQDLLNQNFELEKRKELFDVIYNETVKLGLENVWEMKPLVNGKEIMNI 529

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLAHPS TSEECIDWIRE +SKRVKLDE
Sbjct: 530 LQLKAGGPLVREWQQKILAWQLAHPSGTSEECIDWIRETHSKRVKLDE 577

[Close]

BLAST of HG10004091 vs. NCBI nr
Match: XP_022134376.1 (putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Momordica charantia])

HSP 1 Score: 870.9 bits (2249), Expect = 5.0e-249
Identity = 440/527 (83.49%), Postives = 466/527 (88.43%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MA+SI + KP+VQVK+ IELTE EEKIF RLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 53  MASSICTMKPVVQVKEKIELTETEEKIFDRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 112

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVD+VREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 113 YDIDIALDNMLGSEFVDRVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 172

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLS VEDFTKRGISDLKFG
Sbjct: 173 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSSVEDFTKRGISDLKFG 232

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARF+FTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 233 KIVTPLPAKATFMDDPLRVLRAIRFCARFKFTLDEELKEAAACEEVKAALAAKISRERIG 292

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLM++GNQPVKAM YIC+LTLFWTVFTLPSNTE EISE                   
Sbjct: 293 VEIDLMVAGNQPVKAMSYICELTLFWTVFTLPSNTELEISEVCNRLCIACLDATWSLIHL 352

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  +EQKRLSMYA+LFLPFRKFTF+DKKSKK                     VVNV
Sbjct: 353 IKCFTFNEEQKRLSMYAALFLPFRKFTFQDKKSKKIPVVNYIFRDSLKRKVSDADTVVNV 412

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQALEKFLSLIP+L SKEEIQPNG+DWGV+CADVPVTSRIRVLTGLLLREIKDFWPVALL
Sbjct: 413 HQALEKFLSLIPILASKEEIQPNGVDWGVECADVPVTSRIRVLTGLLLREIKDFWPVALL 472

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDYT+DLLNRHFELE+RKELFDV YNEIVKLGLENVWEVKPLVNGKEIMNI
Sbjct: 473 MATLLYPANVDYTEDLLNRHFELERRKELFDVAYNEIVKLGLENVWEVKPLVNGKEIMNI 532

[Close]

BLAST of HG10004091 vs. NCBI nr
Match: XP_022923490.1 (putative CCA tRNA nucleotidyltransferase 2 [Cucurbita moschata])

HSP 1 Score: 866.7 bits (2238), Expect = 9.5e-248
Identity = 441/528 (83.52%), Postives = 463/528 (87.69%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MA+SIS+P P+VQVKD IELTEIEEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDC
Sbjct: 60  MASSISTPNPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDC 119

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNP+QSKHLETARMRIFDIWIDF
Sbjct: 120 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPEQSKHLETARMRIFDIWIDF 179

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGISDLKFG
Sbjct: 180 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFG 239

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALAAKISRERIG
Sbjct: 240 KIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALAAKISRERIG 299

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLM++GNQPVKAM YICDLTLFWTVFTLPSNTEPEI +                   
Sbjct: 300 VEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWNLLQL 359

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLSMYA+LFLP RKFTFKDKKSKK                     VV +
Sbjct: 360 IKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAETVVQL 419

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           H ALEKFL+LIPLLVSKEEIQPNG+DWGVDCADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 420 HHALEKFLTLIPLLVSKEEIQPNGVDWGVDCADVPDTSRIRVLTGLLLREIKDFWPVALL 479

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           +ATLLYPA+VDYT+DLLNR FELEKRKELFDVVYNEIVKLGL+NVWEVKPLVNGKEIMNI
Sbjct: 480 LATLLYPANVDYTEDLLNRRFELEKRKELFDVVYNEIVKLGLQNVWEVKPLVNGKEIMNI 539

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLK+GGPLVREWQQKILAWQLA PS T EEC DWIRE +SKRVKL+E
Sbjct: 540 LQLKSGGPLVREWQQKILAWQLARPSGTFEECQDWIRESHSKRVKLNE 587

[Close]

BLAST of HG10004091 vs. ExPASy Swiss-Prot
Match: Q9Y7U9 (tRNA nucleotidyltransferase cca2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cca2 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.0e-66
Identity = 157/488 (32.17%), Postives = 261/488 (53.48%), Query Frame = 0


Query: 18  IELTEIEEKIFHRLLGTLRHFNLQT------QLRVAGGWVRDKLLGKDCYDIDIALDNML 77
           I L ++E+K+ + L  T      ++      ++R+AGGWVRDKLLG    D+D+ L+ + 
Sbjct: 5   IVLNDVEKKVVNLLKKTADFIESKSSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNKVT 64

Query: 78  GSEFVDKVREYLLTVGEEA-----QGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCE 137
           G +F + + EY+ ++  ++       +  +  NPDQSKHLETA + +FD+ IDFV LR E
Sbjct: 65  GVDFANSIFEYVHSLDSDSVIPYKDALGKLTVNPDQSKHLETATLSLFDLDIDFVGLRAE 124

Query: 138 EYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPL 197
            Y + SRIP+    GT E DA RRD T+N+LF+NI    +ED TKRG  DL+   +VTP+
Sbjct: 125 SYDDKSRIPSVTP-GTVETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDLQTKVLVTPI 184

Query: 198 PAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLM 257
               +F++DPLR+LR IRF +RFEFT+D  +  A    +V  A   K+S+ER+G EI+ M
Sbjct: 185 SPLQSFLEDPLRILRGIRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKERVGEEIEKM 244

Query: 258 ISGNQPVKAMGYICDLTLF-WTVFTLPSNTEPEISEDEQKRLSMYASLFLPFRKFTFKDK 317
           + G     A+  +     + +T  TLP+  E +I +  +   S++ SL L F K     +
Sbjct: 245 LKGANAKLALQLLYSTNTYQFTFDTLPAEKEFQIPKALEATESLFQSLALTFPKLMKLSE 304

Query: 318 KSKKVVNVHQAL----------EKFLSLIPLLVSKEEIQPNGL---DWGVDCADVPVTSR 377
             K  + ++ AL          +K    IP +++K++++            C   P+   
Sbjct: 305 DEKIGLWLYVALIPWSSQTVMVKKKQFYIPAIIAKDKLKLRSTYVNQLNQCCTFNPIFDE 364

Query: 378 IRVLT--------GLLLREIKDFWPVALLMATLLYPASVDYTQDLLNRHFELEKRKELFD 437
           +   T        G L+R++   W V  L  +++Y         + N        K L+D
Sbjct: 365 LVNDTSTKNCSSIGSLIRQLNKSWEVVFL-TSVIYSCCKTPAASVSN---TFSSYKSLYD 424

Query: 438 VVYNEIVKLGLENVWEVKPLVNGKEIMNILQLKAGGPLVREWQQKILAWQLAHPSATSEE 473
            +Y++     L+N + +KPL++GK+IM  + +K  GP ++E    +++WQ  HP  + E+
Sbjct: 425 FIYDK----NLQNAYNMKPLLDGKQIMKNVGVKP-GPQLKETMDNMISWQFKHPEGSVED 482

[Close]

BLAST of HG10004091 vs. ExPASy Swiss-Prot
Match: Q9P4S5 (CCA tRNA nucleotidyltransferase, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CCA1 PE=1 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-66
Identity = 172/521 (33.01%), Postives = 262/521 (50.29%), Query Frame = 0


Query: 18  IELTEIEEKIFHRLLGTLRHFNL------QTQLRVAGGWVRDKLLGKDCYDIDIALDNML 77
           I+LTE E +I + L     H+N          LR+ GGWVRDKLLG+  +D+DIA++ M 
Sbjct: 15  IQLTEKETRICNLLKDYTAHYNSLHYGQEPLTLRITGGWVRDKLLGQGSHDLDIAINIMS 74

Query: 78  GSEFVDKVREYLL----TVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCEE 137
           G EF   +  YLL      G +   +  I  NP++SKHLETA  ++FD+ +DFVNLR EE
Sbjct: 75  GEEFATGLNGYLLEHFDKYGVKPHSIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRSEE 134

Query: 138 YSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLP 197
           Y+E+SRIPT Q FGT EEDA RRD T+N+LFYNI    VEDFTKRG  DL+ G + TPLP
Sbjct: 135 YTEDSRIPTTQ-FGTPEEDALRRDATLNALFYNIQQDAVEDFTKRGWQDLQDGVLRTPLP 194

Query: 198 AKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMI 257
           A+ TF+DDPLRVLR IRF +RF F ++  + +     E+  A   KISRERIGVE++ ++
Sbjct: 195 ARQTFLDDPLRVLRLIRFASRFNFNIEAGVLKEMHDPEINEAFNNKISRERIGVEMEKIL 254

Query: 258 SGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISEDEQKRLSMYASLFLPFRKFTFKDKKS 317
            G  P+  +  I    L   +F    + +  + E  +K       +   ++K  F     
Sbjct: 255 VGPNPILGLKLIQRTHLENVIFLW--HGDQSVIEYNRKNWPQTKDVEDIYKKGIFNHHLK 314

Query: 318 KKVVNVHQALEKFLSLIPLLVSKEE-IQPNGL--DWGVDCAD--------------VPVT 377
             + +    L ++L L   + +K++  Q N L     +  AD              +PV+
Sbjct: 315 NFIHHYKDFLSRYLKLRQAIETKDKSFQQNFLLASILIPMADLKIIALPKKKLNNTLPVS 374

Query: 378 SRI---------------------------------------RVLTGLLLREIKDFWPVA 437
             I                                       R   G  LRE++  W + 
Sbjct: 375 ESIVREGLKFNKASSIVVARCVENIAAYNSMVEKYLQSGDLKRSEVGTFLRELRGDWEI- 434

Query: 438 LLMATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIM 473
                + Y + +D     ++R   +    + +D  +N I +  L++  ++ P+++GK ++
Sbjct: 435 -----VHYVSLMDQYLKYISRKDNVVNIIDKYDRFWNYIQEQNLQDSDKMVPIIDGKRMV 494

[Close]

BLAST of HG10004091 vs. ExPASy Swiss-Prot
Match: P21269 (CCA tRNA nucleotidyltransferase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CCA1 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.3e-63
Identity = 181/527 (34.35%), Postives = 260/527 (49.34%), Query Frame = 0


Query: 18  IELTEIEEKIFHRLLGTLRHFNLQ-------TQLRVAGGWVRDKLLGKDCYDIDIALDNM 77
           I LT++E+ I + L      +N +         LR+ GGWVRDKLLG+  +D+DIA++ M
Sbjct: 30  ITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINVM 89

Query: 78  LGSEFVDKVREYL----LTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCE 137
            G +F   + EYL       G +   +  I  NP++SKHLETA  ++F + +DFVNLR E
Sbjct: 90  SGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRSE 149

Query: 138 EYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPL 197
           +Y+E SRIP K  FGT EEDA RRD T+N+LFYNI+   VEDFTKRG+ DLK G + TPL
Sbjct: 150 KYTELSRIP-KVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 209

Query: 198 PAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLM 257
           PAK TF+DDPLRVLR IRF +RF FT+D E+       ++  A  +KISRER+GVE++ +
Sbjct: 210 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 269

Query: 258 ISGNQPVKAM-----GYICDLTLFWTVFTLPSNTEPEISEDEQK------------RLSM 317
           + G  P+ A+      ++ ++  FW   +       E  +D  K             L  
Sbjct: 270 LVGPTPLLALQLIQRAHLENVIFFWHNDSSVVKFNEENCQDMDKINHVYNDNILNSHLKS 329

Query: 318 YASLFLPF-RKFTFKDKKSKKVVNVHQALEKFLSLIPL---------------LVS-KEE 377
           +  L+  F  K     +K  +     Q       L P+               LVS  E 
Sbjct: 330 FIELYPMFLEKLPILREKIGRSPGFQQNFILSAILSPMANLQIIGNPKKKINNLVSVTES 389

Query: 378 IQPNGLDWGVDCADV------PVTSRIRVLT-------------GLLLREIKDFWPVALL 437
           I   GL    + A V       + S   +L              G+ LR     W  A  
Sbjct: 390 IVKEGLKLSKNDAAVIAKTVDSICSYEEILAKFADRSQLKKSEIGIFLRNFNGEWETAHF 449

Query: 438 MATLLYPASVDYTQDLLNRHFELEKRK-ELFDVVYNE----IVKLGLENVWEVKPLVNGK 476
            +            D   +  +LE +K EL    YNE    I    L N  E+KP+V+GK
Sbjct: 450 AS----------LSDAFLKIPKLETKKIELLFQNYNEFYSYIFDNNLNNCHELKPIVDGK 509

[Close]

BLAST of HG10004091 vs. ExPASy Swiss-Prot
Match: Q9UTQ0 (tRNA nucleotidyltransferase cca1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cca1 PE=1 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-54
Identity = 158/505 (31.29%), Postives = 248/505 (49.11%), Query Frame = 0


Query: 18  IELTEIEEKIFHRLLGTLRHF----NLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLGS 77
           +EL E E+++    L   +        + ++R AGGWVRDKLL  + +DID+A+D M G 
Sbjct: 8   LELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGWVRDKLLRIESHDIDVAIDCMSGF 67

Query: 78  EFVDKVREYLLTVGEEAQ-GVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCEEYSENS 137
           EF   ++ YL     + +  V  I  NP +SKHLETA  RI  + ID VNLR  +Y+ NS
Sbjct: 68  EFAQHLQSYLAQQHPDWETKVIKIDANPLKSKHLETATARIMGMDIDIVNLRHHDYT-NS 127

Query: 138 RIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATF 197
               K  FGT  EDA RRD TIN+LFYN+    VEDFT +G+ DL    I TPL A  TF
Sbjct: 128 NSSNKLVFGTPLEDALRRDATINALFYNLKSKTVEDFTGKGLVDLSNKIIRTPLVADETF 187

Query: 198 MDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMISGNQP 257
            DDPLR +R IRF  +++F + EE  +     E+   L + ISRERIGVE+D M+     
Sbjct: 188 GDDPLRAVRCIRFATKYDFNIHEETIKGLKNPELHERLRSSISRERIGVEVDKMLKHCNT 247

Query: 258 VKAMGYICDLTLFWTVFTLPSNTEPEISEDEQKRLSMYASLFLPFRKFTFKDKKSKKVVN 317
            +A+  I  L +F  +F      E    + + K +   + +      F +  KK   + N
Sbjct: 248 NRALKIIHSLGMFACIF---GPLEIHTKKLQSKNIESLSLIPYAIDLFGYLQKKDVSIKN 307

Query: 318 VHQA-------------------LEKF-LSLIPLLVSKE----------EIQPNGLDWGV 377
           +  +                   LEK  + ++P ++ ++          +++   + + +
Sbjct: 308 LSSSSKYIFWLAIATLPWYNWSILEKSKIKILPPILIRDSLKYSKPIMSQVENFFVHYPL 367

Query: 378 DCADVPVTSRIRVLT----GLLLREIKDFW----PVALLMATLLYPASVDYTQDLLNRHF 437
             + + V  +   LT    G L+RE+   W      A  M TL+  + +           
Sbjct: 368 IMSKINVLEKEGKLTRLGCGRLVRELGPHWRDIIDWAFFMNTLISNSDIQ---------- 427

Query: 438 ELEKRKEL--FDVVYNEIVKLGLENVWEVKPLVNGKEIMNILQLKAGGPLVREWQQKILA 478
            L K +E+  F V+   I + G+E  + ++P++NG EI  IL ++  GP +R+     + 
Sbjct: 428 RLNKDEEVTWFHVLVKHIEEYGMEEAYNIQPIINGNEITRILGIRP-GPHLRKMLDDSIE 487

[Close]

BLAST of HG10004091 vs. ExPASy Swiss-Prot
Match: A0A179GC70 (Nucleotidyltransferase lcsQ OS=Purpureocillium lilacinum OX=33203 GN=lcsQ PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-47
Identity = 121/302 (40.07%), Postives = 172/302 (56.95%), Query Frame = 0


Query: 4   SISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQ---TQ---LRVAGGWVRDKLLG 63
           S S+P   +    T+ L+  EE++   LL   R  +     TQ   LR AGGWVRDKLLG
Sbjct: 25  SQSAPPAAMAHARTVRLSAREEQLRALLLDVCRSIDAAGDVTQPIILRWAGGWVRDKLLG 84

Query: 64  KDCYDIDIALDNMLGSEFVDKVREYLLT--------VGEEAQG-VAVIPCNPDQSKHLET 123
            + +DID+A++ M G  F  ++ ++           +G    G +  +  NPD+SKHLET
Sbjct: 85  IESHDIDVAINAMTGVHFAQRMCDFCTLPDAIKRHGIGPRDVGNLHNVARNPDKSKHLET 144

Query: 124 ARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVED 183
           A ++IF + +DFVNLR E Y+++SR P   +FG+AEEDA RRD TIN+LF+N++   VED
Sbjct: 145 AMVKIFGLDLDFVNLRRETYADDSRNPA-MEFGSAEEDALRRDATINALFFNLHTGCVED 204

Query: 184 FTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKA 243
           FT  G+ D+    I TPL    TF DDPLRVLR +RF +R +F +D   +       V  
Sbjct: 205 FT-GGLPDMAARMIRTPLDPLQTFTDDPLRVLRLVRFASRLQFYIDPATQRVMDHPTVLQ 264

Query: 244 ALAAKISRERIGVEIDLMISGNQPV------------KAMGYICDLTLFWTVFTLPSNTE 279
           AL  KISRER+GVE++ M+ G  P             +A+  + +L L+  +FT P+   
Sbjct: 265 ALRVKISRERVGVELEKMLKGTCPPQVEVHFWAQPTRRALELLDELHLYHAIFTDPAREP 324

[Close]

BLAST of HG10004091 vs. ExPASy TrEMBL
Match: A0A0A0KEA1 (PolyA_pol domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052120 PE=3 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.4e-257
Identity = 459/528 (86.93%), Postives = 467/528 (88.45%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           M T+ISSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 50  MTTAISSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 109

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 110 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 169

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG
Sbjct: 170 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 229

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 230 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 289

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YI DLTLFWTVFTLPSN EPEISE                   
Sbjct: 290 VEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQH 349

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLS YAS FLPFRKFTFKDKKSKK                     VVNV
Sbjct: 350 INCFTFSDEQKRLSFYASPFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNV 409

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQALEKFLSLIPLLVSKEEIQPNG+DWGV+CADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 410 HQALEKFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA VDY QDLLNRHFELEKRKELFD VYNEIVKLGLENVWE+KPLVNGKEIMNI
Sbjct: 470 MATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNI 529

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLAHPS TSEEC+DWIRE +SKRVKLDE
Sbjct: 530 LQLKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVKLDE 577

[Close]

BLAST of HG10004091 vs. ExPASy TrEMBL
Match: A0A5A7SQ51 (Putative CCA tRNA nucleotidyltransferase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00390 PE=3 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.2e-257
Identity = 457/528 (86.55%), Postives = 469/528 (88.83%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MAT++SSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 50  MATAMSSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 109

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 110 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 169

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSEN RIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG
Sbjct: 170 VNLRCEEYSENRRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 229

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 230 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 289

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YI DLTLFWTVFTLPSNTEPEISE                   
Sbjct: 290 VEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNTEPEISEVCNRLCIACLDATWNLIQH 349

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLS+YASLFLPFRKFTFKDKKSKK                     VVNV
Sbjct: 350 INCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPVVNYIFRDSLKRKVSDAETVVNV 409

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQ LEKFLSLIPLLVSKEEIQPNG DWGV+CADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 410 HQTLEKFLSLIPLLVSKEEIQPNGFDWGVECADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDY QDLLN++FELEKRKELFDV+YNE VKLGLENVWE+KPLVNGKEIMNI
Sbjct: 470 MATLLYPANVDYAQDLLNQNFELEKRKELFDVIYNETVKLGLENVWEMKPLVNGKEIMNI 529

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLAHPS TSEECIDWIRE +SKRVKLDE
Sbjct: 530 LQLKAGGPLVREWQQKILAWQLAHPSGTSEECIDWIRETHSKRVKLDE 577

[Close]

BLAST of HG10004091 vs. ExPASy TrEMBL
Match: A0A1S3C4H8 (putative CCA tRNA nucleotidyltransferase 2 OS=Cucumis melo OX=3656 GN=LOC103496556 PE=3 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.2e-257
Identity = 457/528 (86.55%), Postives = 469/528 (88.83%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MAT++SSPKPLVQVKD IELTE EEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 50  MATAMSSPKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 109

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 110 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 169

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSEN RIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG
Sbjct: 170 VNLRCEEYSENRRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 229

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 230 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 289

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLMI+GNQPVKAM YI DLTLFWTVFTLPSNTEPEISE                   
Sbjct: 290 VEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNTEPEISEVCNRLCIACLDATWNLIQH 349

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLS+YASLFLPFRKFTFKDKKSKK                     VVNV
Sbjct: 350 INCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPVVNYIFRDSLKRKVSDAETVVNV 409

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQ LEKFLSLIPLLVSKEEIQPNG DWGV+CADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 410 HQTLEKFLSLIPLLVSKEEIQPNGFDWGVECADVPATSRIRVLTGLLLREIKDFWPVALL 469

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDY QDLLN++FELEKRKELFDV+YNE VKLGLENVWE+KPLVNGKEIMNI
Sbjct: 470 MATLLYPANVDYAQDLLNQNFELEKRKELFDVIYNETVKLGLENVWEMKPLVNGKEIMNI 529

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLKAGGPLVREWQQKILAWQLAHPS TSEECIDWIRE +SKRVKLDE
Sbjct: 530 LQLKAGGPLVREWQQKILAWQLAHPSGTSEECIDWIRETHSKRVKLDE 577

[Close]

BLAST of HG10004091 vs. ExPASy TrEMBL
Match: A0A6J1BXN3 (putative CCA tRNA nucleotidyltransferase 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006653 PE=3 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.4e-249
Identity = 440/527 (83.49%), Postives = 466/527 (88.43%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MA+SI + KP+VQVK+ IELTE EEKIF RLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC
Sbjct: 53  MASSICTMKPVVQVKEKIELTETEEKIFDRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 112

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVD+VREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFD+WIDF
Sbjct: 113 YDIDIALDNMLGSEFVDRVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDF 172

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLS VEDFTKRGISDLKFG
Sbjct: 173 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSSVEDFTKRGISDLKFG 232

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLPAKATFMDDPLRVLRAIRFCARF+FTLDEELKEAAACEEVKAALAAKISRERIG
Sbjct: 233 KIVTPLPAKATFMDDPLRVLRAIRFCARFKFTLDEELKEAAACEEVKAALAAKISRERIG 292

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLM++GNQPVKAM YIC+LTLFWTVFTLPSNTE EISE                   
Sbjct: 293 VEIDLMVAGNQPVKAMSYICELTLFWTVFTLPSNTELEISEVCNRLCIACLDATWSLIHL 352

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  +EQKRLSMYA+LFLPFRKFTF+DKKSKK                     VVNV
Sbjct: 353 IKCFTFNEEQKRLSMYAALFLPFRKFTFQDKKSKKIPVVNYIFRDSLKRKVSDADTVVNV 412

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           HQALEKFLSLIP+L SKEEIQPNG+DWGV+CADVPVTSRIRVLTGLLLREIKDFWPVALL
Sbjct: 413 HQALEKFLSLIPILASKEEIQPNGVDWGVECADVPVTSRIRVLTGLLLREIKDFWPVALL 472

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           MATLLYPA+VDYT+DLLNRHFELE+RKELFDV YNEIVKLGLENVWEVKPLVNGKEIMNI
Sbjct: 473 MATLLYPANVDYTEDLLNRHFELERRKELFDVAYNEIVKLGLENVWEVKPLVNGKEIMNI 532

[Close]

BLAST of HG10004091 vs. ExPASy TrEMBL
Match: A0A6J1EBZ2 (putative CCA tRNA nucleotidyltransferase 2 OS=Cucurbita moschata OX=3662 GN=LOC111431166 PE=3 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.6e-248
Identity = 441/528 (83.52%), Postives = 463/528 (87.69%), Query Frame = 0


Query: 1   MATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDC 60
           MA+SIS+P P+VQVKD IELTEIEEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDC
Sbjct: 60  MASSISTPNPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDC 119

Query: 61  YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDF 120
           YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNP+QSKHLETARMRIFDIWIDF
Sbjct: 120 YDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPEQSKHLETARMRIFDIWIDF 179

Query: 121 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFG 180
           VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGISDLKFG
Sbjct: 180 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFG 239

Query: 181 KIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIG 240
           KIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALAAKISRERIG
Sbjct: 240 KIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALAAKISRERIG 299

Query: 241 VEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISE------------------- 300
           VEIDLM++GNQPVKAM YICDLTLFWTVFTLPSNTEPEI +                   
Sbjct: 300 VEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWNLLQL 359

Query: 301 -------DEQKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNV 360
                  DEQKRLSMYA+LFLP RKFTFKDKKSKK                     VV +
Sbjct: 360 IKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAETVVQL 419

Query: 361 HQALEKFLSLIPLLVSKEEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALL 420
           H ALEKFL+LIPLLVSKEEIQPNG+DWGVDCADVP TSRIRVLTGLLLREIKDFWPVALL
Sbjct: 420 HHALEKFLTLIPLLVSKEEIQPNGVDWGVDCADVPDTSRIRVLTGLLLREIKDFWPVALL 479

Query: 421 MATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGKEIMNI 480
           +ATLLYPA+VDYT+DLLNR FELEKRKELFDVVYNEIVKLGL+NVWEVKPLVNGKEIMNI
Sbjct: 480 LATLLYPANVDYTEDLLNRRFELEKRKELFDVVYNEIVKLGLQNVWEVKPLVNGKEIMNI 539

Query: 481 LQLKAGGPLVREWQQKILAWQLAHPSATSEECIDWIREMNSKRVKLDE 482
           LQLK+GGPLVREWQQKILAWQLA PS T EEC DWIRE +SKRVKL+E
Sbjct: 540 LQLKSGGPLVREWQQKILAWQLARPSGTFEECQDWIRESHSKRVKLNE 587

[Close]

BLAST of HG10004091 vs. TAIR 10
Match: AT1G22660.1 (Polynucleotide adenylyltransferase family protein )

HSP 1 Score: 562.4 bits (1448), Expect = 3.6e-160
Identity = 299/532 (56.20%), Postives = 372/532 (69.92%), Query Frame = 0


Query: 10  PLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDN 69
           P +++K+ IELT+ E KIF RLL TLR+ NL TQLRVAGGWVRDKLLGK+  DIDIA+DN
Sbjct: 76  PSIELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDN 135

Query: 70  MLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCEEYS 129
           M GSEF+DK +EYL +  EE QG  VI  NPDQSKHLETA++RI+D WIDFVNLR EEY+
Sbjct: 136 MSGSEFLDKFKEYLSSRDEEVQGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYT 195

Query: 130 ENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAK 189
           ENSRIPT  KFGTA++DA+RRDLTINSLFYNIN   VED T+RGI DLK GKIVTPLPAK
Sbjct: 196 ENSRIPT-MKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAK 255

Query: 190 ATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMISG 249
           ATF+DDPLRVLRA+RF ARF FTLDEELKEAA+ EEV+ AL  KISRERIG EIDLMISG
Sbjct: 256 ATFLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISG 315

Query: 250 NQPVKAMGYICDLTLFWTVFTLPSNTEPEISED--------------------------E 309
           N PV A+ Y+ DL LF  VF LPS+ EP   E+                          E
Sbjct: 316 NGPVSAVTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWSLLKTPRPGKFSGE 375

Query: 310 QKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNVHQALEKFLS 369
           Q+RL++YA++FLPFRK  +KD K K                      V+N+HQ  E+F S
Sbjct: 376 QRRLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRS 435

Query: 370 LIPLLVSKEEIQPNGLDWGVDCAD-----------VPVTSRIRVLTGLLLREIKDFWPVA 429
           LIP L  K++++ + L W  D  +           +P TS+IRVLTG LLR+IKDFW V+
Sbjct: 436 LIPSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVS 495

Query: 430 LLMATLLYPASVDYT---QDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGK 481
           LL  +LL  A+VD +   QD+    F+LE+ +E +  V   I +LGL+ +W+ KPLVNG+
Sbjct: 496 LL-TSLLLSATVDGSNDHQDIGQLDFQLERMRETYLTVEATIHELGLDKIWDAKPLVNGR 555

[Close]

BLAST of HG10004091 vs. TAIR 10
Match: AT1G22660.2 (Polynucleotide adenylyltransferase family protein )

HSP 1 Score: 553.5 bits (1425), Expect = 1.7e-157
Identity = 297/532 (55.83%), Postives = 370/532 (69.55%), Query Frame = 0


Query: 10  PLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDN 69
           P +++K+ IELT+ E KIF RLL TLR+ NL TQLRVAGGWVRDKLLGK+  DIDIA+DN
Sbjct: 76  PSIELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDN 135

Query: 70  MLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDIWIDFVNLRCEEYS 129
           M GSEF+DK +EYL +  EE QG  VI  NPDQSKHLETA++RI+D WIDFVNLR EEY+
Sbjct: 136 MSGSEFLDKFKEYLSSRDEEVQGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYT 195

Query: 130 ENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAK 189
           ENSRIPT  KFGTA++DA+RRDLTINSLFYNIN   VED T+RGI DLK GKIVTPLPAK
Sbjct: 196 ENSRIPT-MKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAK 255

Query: 190 ATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMISG 249
           ATF+DDPLRVLRA+RF ARF FTLDEELKEAA+ EEV+ AL  KISRERIG EIDLMISG
Sbjct: 256 ATFLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISG 315

Query: 250 NQPVKAMGYICDLTLFWTVFTLPSNTEPEISED--------------------------E 309
           N PV A+ Y+ DL LF  VF LPS+ EP   E+                          E
Sbjct: 316 NGPVSAVTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWSLLKTPRPGKFSGE 375

Query: 310 QKRLSMYASLFLPFRKFTFKDKKSKK---------------------VVNVHQALEKFLS 369
           Q+RL++YA++FLPFRK  +KD K K                      V+N+HQ  E+F S
Sbjct: 376 QRRLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRS 435

Query: 370 LIPLLVSKEEIQPNGLDWGVDCAD-----------VPVTSRIRVLTGLLLREIKDFWPVA 429
           LIP L  K++++ + L W  D  +           +P TS+IRVLTG LLR+IKDFW V+
Sbjct: 436 LIPSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVS 495

Query: 430 LLMATLLYPASVDYT---QDLLNRHFELEKRKELFDVVYNEIVKLGLENVWEVKPLVNGK 481
           LL  +LL  A+VD +   QD+    F+LE+ +E +  V   I +LGL+ +W+ KPLVNG+
Sbjct: 496 LL-TSLLLSATVDGSNDHQDIGQLDFQLERMRETYLTVEATIHELGLDKIWDAKPLVNGR 555

[Close]

BLAST of HG10004091 vs. TAIR 10
Match: AT1G28090.1 (Polynucleotide adenylyltransferase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 57/218 (26.15%), Postives = 103/218 (47.25%), Query Frame = 0


Query: 43  QLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQ 102
           Q+ + GG VRD +L +   D D+                  +T  E  +   V P     
Sbjct: 114 QVYLVGGCVRDLILDRIPKDFDV------------------ITTAELKEVRKVFP----- 173

Query: 103 SKHLETARMRIFDIWIDFVNLRCEEYSENSR---IPTK---QKFGTAEEDAYR------R 162
              +   R  I  +++D + +    +S ++R    P K   +  G  E D  R      R
Sbjct: 174 GCQIVGRRFPICHVYVDDIIIEVSSFSTSARTGKAPNKSFRRPAGCDERDYIRWKNCLQR 233

Query: 163 DLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFE 222
           D T+N L ++ + ++V D+   G+ DL+  K+ T   A  +F++D  R+LRAIR  AR  
Sbjct: 234 DFTVNGLMFDPSENVVYDYI-GGVEDLRNSKVRTVSAANLSFVEDTARILRAIRIAARLG 293

Query: 223 FTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIS 249
           F+L +++  A + +E+ ++L  ++   RI +EI+ M++
Sbjct: 294 FSLTKDV--AISVKELSSSL-LRLDPSRIRMEINYMLA 304

[Close]

BLAST of HG10004091 vs. TAIR 10
Match: AT1G28090.2 (Polynucleotide adenylyltransferase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 57/218 (26.15%), Postives = 103/218 (47.25%), Query Frame = 0


Query: 43  QLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQ 102
           Q+ + GG VRD +L +   D D+                  +T  E  +   V P     
Sbjct: 78  QVYLVGGCVRDLILDRIPKDFDV------------------ITTAELKEVRKVFP----- 137

Query: 103 SKHLETARMRIFDIWIDFVNLRCEEYSENSR---IPTK---QKFGTAEEDAYR------R 162
              +   R  I  +++D + +    +S ++R    P K   +  G  E D  R      R
Sbjct: 138 GCQIVGRRFPICHVYVDDIIIEVSSFSTSARTGKAPNKSFRRPAGCDERDYIRWKNCLQR 197

Query: 163 DLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFE 222
           D T+N L ++ + ++V D+   G+ DL+  K+ T   A  +F++D  R+LRAIR  AR  
Sbjct: 198 DFTVNGLMFDPSENVVYDYI-GGVEDLRNSKVRTVSAANLSFVEDTARILRAIRIAARLG 257

Query: 223 FTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIS 249
           F+L +++  A + +E+ ++L  ++   RI +EI+ M++
Sbjct: 258 FSLTKDV--AISVKELSSSL-LRLDPSRIRMEINYMLA 268

[Close]

BLAST of HG10004091 vs. TAIR 10
Match: AT1G28090.3 (Polynucleotide adenylyltransferase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 57/218 (26.15%), Postives = 103/218 (47.25%), Query Frame = 0


Query: 43  QLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQ 102
           Q+ + GG VRD +L +   D D+                  +T  E  +   V P     
Sbjct: 51  QVYLVGGCVRDLILDRIPKDFDV------------------ITTAELKEVRKVFP----- 110

Query: 103 SKHLETARMRIFDIWIDFVNLRCEEYSENSR---IPTK---QKFGTAEEDAYR------R 162
              +   R  I  +++D + +    +S ++R    P K   +  G  E D  R      R
Sbjct: 111 GCQIVGRRFPICHVYVDDIIIEVSSFSTSARTGKAPNKSFRRPAGCDERDYIRWKNCLQR 170

Query: 163 DLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFE 222
           D T+N L ++ + ++V D+   G+ DL+  K+ T   A  +F++D  R+LRAIR  AR  
Sbjct: 171 DFTVNGLMFDPSENVVYDYI-GGVEDLRNSKVRTVSAANLSFVEDTARILRAIRIAARLG 230

Query: 223 FTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIS 249
           F+L +++  A + +E+ ++L  ++   RI +EI+ M++
Sbjct: 231 FSLTKDV--AISVKELSSSL-LRLDPSRIRMEINYMLA 241

The following BLAST results are available for this feature:

BLAST of HG10004091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886744.1	1.4e-259	88.07	tRNA nucleotidyltransferase cca2 [Benincasa hispida]	[more]
XP_004140936.3	4.5e-258	87.12	tRNA nucleotidyltransferase cca2 [Cucumis sativus] >KAE8646654.1 hypothetical pr...	[more]
XP_008456683.1	6.5e-257	86.55	PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Cucumis melo] >KAA0031671...	[more]
XP_022134376.1	5.0e-249	83.49	putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Momordica charantia]	[more]
XP_022923490.1	9.5e-248	83.52	putative CCA tRNA nucleotidyltransferase 2 [Cucurbita moschata]	[more]

BLAST of HG10004091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y7U9	1.0e-66	32.17	tRNA nucleotidyltransferase cca2 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9P4S5	8.5e-66	33.01	CCA tRNA nucleotidyltransferase, mitochondrial OS=Candida glabrata (strain ATCC ...	[more]
P21269	2.3e-63	34.35	CCA tRNA nucleotidyltransferase, mitochondrial OS=Saccharomyces cerevisiae (stra...	[more]
Q9UTQ0	1.1e-54	31.29	tRNA nucleotidyltransferase cca1 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
A0A179GC70	1.8e-47	40.07	Nucleotidyltransferase lcsQ OS=Purpureocillium lilacinum OX=33203 GN=lcsQ PE=2 S...	[more]

BLAST of HG10004091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEA1	2.4e-257	86.93	PolyA_pol domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052120 P...	[more]
A0A5A7SQ51	3.2e-257	86.55	Putative CCA tRNA nucleotidyltransferase 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3C4H8	3.2e-257	86.55	putative CCA tRNA nucleotidyltransferase 2 OS=Cucumis melo OX=3656 GN=LOC1034965...	[more]
A0A6J1BXN3	2.4e-249	83.49	putative CCA tRNA nucleotidyltransferase 2 isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1EBZ2	4.6e-248	83.52	putative CCA tRNA nucleotidyltransferase 2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of HG10004091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22660.1	3.6e-160	56.20	Polynucleotide adenylyltransferase family protein	[more]
AT1G22660.2	1.7e-157	55.83	Polynucleotide adenylyltransferase family protein	[more]
AT1G28090.1	5.2e-10	26.15	Polynucleotide adenylyltransferase family protein	[more]
AT1G28090.2	5.2e-10	26.15	Polynucleotide adenylyltransferase family protein	[more]
AT1G28090.3	5.2e-10	26.15	Polynucleotide adenylyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002646	Poly A polymerase, head domain	PFAM	PF01743	PolyA_pol	coord: 44..182 e-value: 6.1E-31 score: 107.5
IPR002646	Poly A polymerase, head domain	CDD	cd05398	NT_ClassII-CCAase	coord: 30..178 e-value: 8.16301E-38 score: 133.102
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 12..178 e-value: 1.8E-41 score: 143.4
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 23..178
None	No IPR available	GENE3D	1.10.3090.10		coord: 181..464 e-value: 2.9E-25 score: 91.5
None	No IPR available	PANTHER	PTHR13734	TRNA-NUCLEOTIDYLTRANSFERASE	coord: 14..479
None	No IPR available	SUPERFAMILY	81891	Poly A polymerase C-terminal region-like	coord: 182..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004091.1	HG10004091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001680	tRNA 3'-terminal CCA addition
biological_process	GO:0006396	RNA processing
molecular_function	GO:0052929	ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
molecular_function	GO:0052928	CTP:3'-cytidine-tRNA cytidylyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016779	nucleotidyltransferase activity