HG10004079 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004079
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tRNA pseudouridine(38/39) synthase
Location	Chr08: 13455205 .. 13471353 (+)
RNA-Seq Expression	HG10004079
Synteny	HG10004079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGTTTGACCGTCTTCTCTCATTTCAACTTCCGTTTGGTTAATGACATAGTGGCGAAGTATTGGGAGAGCCATGACAGATGTTCGATCTCAATCCACTAATCTGACAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGGTTTGGTCGACTATATTAGAATGAAATCAGAGCTATTTGGTTCTCATGCCGGCCTAGCTAGCCGTATGGTAGACTTTTCGTCAGGGCTAACTAAACATGAATTCGTGCAGAGGAGGATAAACTTTGACGACGGGAGTAGATCGATTGAGAAAAGCAAGGAATCTGGCACTACTAAGAAGAAAACAGTAGAAAAAACTCCAGGCTAGTCATTACTTTATGACCAAATAGAGTCTGTTTGTTTACTCCTCCATATTTGCACACACATATATATATTGGAAATAAGAGGATATCCATGGTAGCATGGTGGAGCAGTAGTAGCTCACATGTATATACGACTAGGAACGCACTTTCATATCTTGTAATGTAATGAGATTATTATGAAATTCAAGATTAAGAGATGATGATTTGTGAGTCCGAACTATAGTCCAATTATGCATTAGCAGATGACGAAATATTCAATGAGGCCGGTACAATGTGTCGGCCTCACCAAATAACTTTCATGTCCCTAATAATCCTACGACACAGAGTAAAAAGTGAAAAATGATGCAACTCAGTCTAAAAATGGCAAGCCTATTTTTTCTTTTTTGCAAAATTTTTAAAATTTATTTTACGAGCAACAGACGTTTGGAATGTTTATGAAATTTAGATGAAATAATTTACGGTAGTTTCATGCATATTATCAACCTTGTTTATAATATATCACAAGAGTCATATTCCATGTTTCTTTTGCGAGGATTATCTTCTGGAATGATTTGGTTGTTTCTACTCTCAAATTTAATTATTTTATGGGTGAAGGTTATAACACAATGATCTTGGAGCACTGTTCGAAGAGATATATTGCTCTAAAAATAATGTATTTCGGGCAGAGGTATGTAATCTTGTCATAATGGGAACAAGACCAGTGTCTTTTAAGTTTTACTTTCCCCTGCTAATTTTCCGTACATCATAGTCCTCCAGTAACTTCTTCTGAAGTAAGGAGAAATCTTATTTAAAAAAGGAAAAAGAAAAAACAAACAAACAAAAGAAGAATCAAAACAAGTTGTCACTAAAACTATTCTGTCTTTGTTGCTCTTTTGATATTGCGAAAATTCAACTTTGTATCAAATAATGCCTGAAGTTCTGGTTACATCATCTGTACAGGTTCTACGGTTTTGCTTCAGAGGCACAAATGGAACCAACAGTTGAAGTACAGTTTCAAATTCAGCTTCTTAAATCTTAACAAATTATTTATGATTTTTCAATTACATTGGTACTGGTGGGAAATGTCAAGATCAAGAACGCACGATATTGGTTCTCAATGTTTACTGGGAGTGCCTAAACATTTAATAATGCATTTAGAGGATCATAATATCAATTTTTTTTCACCTTCCATCTTTTCTAATTGATATTTGATCACACCATCTGTTAGAACTCATCATGCAACTCTCAAAAGTAAATATAAGGTTTTCTTTGTCAACAAATACTCTTCCGCTCCTGCTTGCTAAGGAATAACATTGATATTATTTTGATGCTGTGCTTAATTATGGATTTGGATTATAATTAATAATGCTAGAAAACACAATCAACAATGATTTTGGTCCTTCTGATCAGTAGCATGAGTTTGAGTCATAAATCTCATAAGCATGAATTAAGGGGGGGGGGGGGGGGGGGTCAATTAGTTTGTTATGGAAATAATGAGAATGCTAAGGGGGTGTCAACATAGTTGAGATTCCCGTGTACATCTCTTGATCCCTATTTTCGCTATTTGTTTCTTCTCGTATCTACTTTGTACTTTGAGCATTAGTCTCATTTTATTAATTCAATGAAGAGGCTGGTTTCCATTTCAAAAAAAAAAAAAAAATCTCTTAAGCATGAATTATGAGGTAACCAGACTCCCAAGATTTCAGAGGCTTTGGATGTCTCCTGAGTTTCACTCCAGTAATAGTAATTAGCCCCTCTGACCTTCACCCTTGCAATTCCTTCTTACAGCCACCCTCTCTTCACCTTTCCCTCTCTTTTGTGATTCTCTTGCGATCCCAAAAGAAAACAAAAGGATTAAGAGATAGATGGAGCCAAAGGTGAACTAAAAAGAGAAGGAATAGTCACTGGAAAAGACTTTTGATAGGGTTGATTGGGACATTTGGATACTATATAAAAGTTGAAAGGCTAAGGCAATAGACGAGCATGACTTCATGGTTGGGTGTTACATTTCACATCAATTTGTTTAAGGGAGGGGGTAATGGTAGATATGGTGGTTGTGAGGAATGTTGGGCGAGAAGAAATTTAATTGTTAATTTTTTTATCCATGGATTAATTGTCAATTTGTTATCTCATCTTCCTGCAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAAGACGTTTCAAATCTGTAGGGAATAACATTGTATGGCTAGAATAACATTGTACGGCTAGAATAACATTGTATAATGATAATGTTATGCTTGTTTCCTGAATACTGAATTAATTCACTTTTGGTTTTCCATTAGCCGTTCAAAATGACATTTCCTGCCACCTCTTACACGTCCTTGGGGGGTTTGGTTGAGGTGTGGAATGGAAACGGAAATCTAATGATACCTCTTTTATGTAGTTGACTAGGACTGTCTTGTAATGTTCTTTATGTGTCCCTCGTTTGTACGAACGCACGAAAAACACATGAAAATATTGCTGAAAAAGCTTAATATTTTTAATATGAAAACCAAAGAGATGAAGATGGACAACATAATTCTTTTAGTTATTTGGGTTTTTCTTCTATGGATTTATTATTATAATTATCAAGGCTACAGTTCGTTGTCCAAATTTGGCTTTTAATTTAAATTTATATTACAAATGCTTTTCTGGTTCCGTAAGTCATTAGTCACCCAGTAGTCAGAGAATCAGAATTAATTGGGCAACTTTGTTGACCTTCCAATCATCATTTGACTTAATTTCCCCTTTCTTAGCATTCACATCACACTATCGTTCCTGCAGGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGGTCAGCCAAGTTGATGTTGCCAAAGTTGTTCTCTGTTGTTAATACCTTGCATGCTGAATCATTCTAATGAGCTGAGTGATGACATTGAGTGGGTCATATTTTTTGCTTTCTGTTTTACATGGATGTATTTGACTATTTTAATAGTTGATAGATTTTCATAGCATTAAGTTACTGCAAATGATACAAACTATGTTTTAGTTTACTGTTTTTCCCAAAAATTTAGACTGTCATTTAAAGCATTTTTCTCTAATTAGCTTTACTATAGGGTGATAATATCTCTTTCAACAAGTGTTAACGTTCACATCACCTACTATCTCTTTGCGTTGCTAAACATAACTTTTAATGTTATCTTATTGTAACAAATTAGTTTATGTACAAGCAGACAATTAAGAGCAAAAATCATTCTCGTTGATTCTGTCCTGTTTACATTTGTGTATAGTATTTTAGATAATGGTGGCTCCATTGTCTGATTTTTGTTAGAAATATAAAATATCAATGGAAGAGCCTTCAAAGAATGATAGATTTGATAATGATGGCATTCTTGTTTGAAACTTCAAAATATAACAGAGTCTTTACTGCATTAGGAAAGGAAAGTAGATGGTAGCAAGACCGTATATAGGGAACTGCAGACATATATATATATATAAATAAAAATGTGATCTATTGTTTCATGTGCTTATTTTTTCTGAATTTCATATTCTATAGGGGTAGGTTCTTTTGTGTTCTAATTGGAGTGTTGCATGCTTTTTCCATCTCTGTTATCTTAATTTCACTTTCTTTATTATTTATTCTCAGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGGTTTGTCTTGCTCTTGTGATTTTTTATAGATTTATTTATTTCCCTTTGGCCTGTTCTTGTGAGCGATGTGTTGTGTAGTTTTTTAATGGGAATTTAGGATCACGAAACCAGCATCCAGCAGATTTAAAAATCAATCTAACTGGCTTTGACTGCAGAGCTGATGTGCCTACATGAAATTTTGAACATAGCCGGGTGCTATGCTTTAACCTTCTAAATGTCAATACACCTCTCTAAGAGTTGCAGTGACCATCAGCATCTCCTTGCACCCCTTACCTTATACAAGCAGCTTTACTTGTGTGTTCTTCTTTTTCTTTGTTAGATACAGCTGGGGCTACATGCTGCTTAAGTTTTTTAGACATGCTTAACATTGCCAATGTATGTATTGCATCATGATCTGGGGATGACATTTTACATTACTTTGGGGCATTGGTTTGAAACCAAGAACCATGTTTGATTTTTGGTTACTTCCTAAAATTTGAGTTTACACATGTATTACCTTTTTGCTAAAGAATAATATTTTTTACAAGGGACTCAGTCAATAGGGATTATGGTTCATAATTATCTTAAAATTAGTTTTGGAAAACCCACGTTGTAACTCATACCCAAACAATTCAAGAATGTTCAAATCCACAATGTTGAGTGTTATACTTGGTAATCATCAGTACTTTTATGATGCTCCACATACACACAGATACTCCATTCAACATGTATGCTTATATTGTCGGAACAATGTTAATGCTTACTCTGGCATTGTTGCCTCTATATGCAGCACAGGTTTAGTTGTTTACGAAGAAAGTATAAATATTTTTTCTGGGGAGCAAATTTGAATATCACGGTATGCGAATTATTTTGTTTTAGGCTTATAATGCTTTTGCAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGTTGGTGTTGCTATCAGATCTTCTCATCTGTTCTCCAATTGAACTGCGTAATCGGATTGTGCCTTGCGTTTGTATATTTTTATTCTCGAATCTGCTTTGCACATTTGCTTCTCAGGCCATCCAAACTAGCCTTCCTCTAGCTATTGTTCATGCTTATGTTACTTTATTCTTCCCAGTTTTGGTCTCTTAAGTCCACTAACTATGTTCTCTCCTAGGTGTTGCCAAGCTGACAGTAGTTTACTAACTAGAATAGTAGTGCTTCTCTGACCATATTCATTTTGAGTTGTAGATAATACTGTTGAAATGGACCATCTCTGTGATTTGTATCATGTACAGGGGTGGACTGAGTTCACATCATGCAAGATGCTTCGAACCTTGGAAGGATGATCATGTTAAGCATCCTTACATTATTGCCGTGTTAGATTTCTGTTTATTCCAAATCTAGAATGTATGAAGATGATTAGACAAATTAAAAGAATATGAAATTCTCTTCTACTCTTCTGGGAGAAAAAACTGTGATCCTATAGAACCGTGTTTTATGATAGAACTCTCTCGAATGTATCTTTTGCAACTTCATTCCACATCATCGTGTCCCGAACTAAGATGTCGTCTTGACTCAGGGTATCCTTTTTTTAATAAATAAATTAATCTCTCTCTCTCTCTCTCTCATGCACATCTATGAAATATTTTTGTTTCTCGACTCTGAATCTTTCTGGTACTTTGCCAGGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTGTGTGCCAGACGTCTTTACATCTGAAATTGCTATGCTTAAATAAGTTGCTTTTTTAATATGTTAAACTGCTTGCTTTTGCTCATGGAAATATAGCCATCTTATACTTCATAGGCCTTAATACTCTCACTTCAGTTTATCATATCTATCTGGAACGGCCAAAAAAGATAAATAAGTAATTGTAAATTTGGTGGTAACTAGGAGCTAGTGTTTTTCAGAATAGACAGCCAAATTTAACTTTATATAGATGCATCGGCCGTTGACAAGGAAACTACCTAGCCACTGTTTCTGTGCAATACATTGGTCACACAATTAGCACTCATTTCAAGATGGCAACATTGAAAGCCACTGTATTATGGTTTCCCAATTATCAACATTACTTGGCACATGGTGTGAATTTGTTATGTTATCTGGAGTATAAAATGCATCTTAATCTAATGGATGAGAGGACTGCTAAATTTTGTAGGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGGTACTTATTGCAATTGATTATAGATATTGTGACTTCTACCGCCAGTATATTATCTTTTCACCTTAGTTGTCGTTATATTATTGTTCTATATTTAGAGGATTTCCCTGCCTGCATTGCTTCTAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGGTTTGAATTGTAGTCTTTCCCTATTATACATTAGTCTTCCTTTTTCAATTGATTCATGATACTGATGCGACCACTTCTATCTCCCCTCCAGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCGTAAGTTATTCACAAAAATACTGTTTACTATTGGGATTATTTATTTGGTAATGTCATATAGTACTACACTATCTGTACTAAACAACTGAATATATTGTTTTAGTATCACAGTTAAAAAGAAAAACACTTAGTTACCCAAATCTAATAACCCTTGTGTACATACGAGTTACCGAATGGGGTCATAACCATTATATGTTTTGTCTGTGAACTCCTCAAGTATTATAGATGTCTTGAGATGAGCAAAAATGGGCTCAGGATGGTTTACACTTCATGTTATTTTGCTTGCATTCCTTTGCCTACCAGAGGTAATTAATATCTACCCACGCCCTTCAGTTACAGCTGGATGCAAAAGCAGGGTGTAAGGTATTTCCCTCACAACTATTGATATGAGATGGAAAGAAATGCTCTAAGGCAATACAAACACTTCCCAGTCTATTCGTGAGGGTTGAATAAACTCTTCTTCCTATCAGCTTGCTGAAACTGAAAGATATAAAAAGTACGAAAATCCACTCCCTAATTCTTTACAAATGTGTAGAGCCCCCCTTTCCCAAACATTCTCTGTGCTCAAAACCTCACCTGATCCCCCCAACGTCCCTCAAGGCAGACCTCAAATGGTTCCATCCACGATTCTAACTCACTCACTGAGGTACATCGTCCTTACTTCTTCTGTATTGAAGAGTAATCAGGGGCCTAACATAGGGTTGCTTAAATTTTTTAGTAAAAGGGGCAGGATTCTAAAGGTGACTTGGCTACTTCGATGGATTTAGACTTTCTAGAACATATTATTCCTAGATTTAGAAAGCAATCTTCTAGATAATTGACTTGTCCTTTGAATTCCCTTAATCTTGTGGCCGATCTTTTCAATAGAACTATGCATCTGAAGTGGAAAATCGATGAAATATTGAAATTGTAGTGAACTGACTTCTCTTTCTTTGCTAATGATTTATGTTCTTGCAAGCCTAGCCGCCGTGGAGGAAGATGCTAATCGAAAACTTCAAATATTAGCTACATGATTGGGTTATCTTCTAAAGAGGGATTGGCCTTTGTTTGTTTGATCGGTTAAATCCTTGTATCTAAAGTGTTGCCTTTTCTCCTCCTCATCCTCTAACGATATTATTAACTGCCATTTTTATTCTCTGTTTCCAAAACCATACCTTTCCCACTGTTCTTATTCCAATATGATAGTGTATGTATTGATATATGCTGTTACCTTTCCTTGTAAATCTTACGAGTTGTTTTACTTATCCCAGCTTCTTATGAAGAGCGGCGTGCCAAACTTGATCCAACATCAACGAGTTGATCAAATACATCTTCTTAGGTGCAGGTAACATGGTTTCCCATTGCATGCTATATTCACTTCATTGTCAAGATCTTTATGTCTCTTAACATGGTATCTAGTTTCACATTTTTGTGTTTTCTGAAAAATACGTAAAAAGTTGTCAAGGAAAAAATGAAACTAGTTATCATATTGATATGGATAGAAGATAAATCTAAGAGTATCTCTTGTTCCATTTTATAAGAGAGTAGAAGTATTTTAAAAGTAGATTTGGCCTATCTTTTAGAACACTAATAATTAAGGGCACTTCTCATATTTATCGGAAATTCAAACGGTTCAAAAAAGTACGAACCACTTCATTTCCTAAAAAAACATAGGTAGCAAAAAGTATTGGCAATGGTGGTTTTTAACTCACCCTTAGTAAACAAATTGCATTACCGTAGGCCCTTTGGTAACAATTTTATTTTTGGTCTTCTATTTTTGAAATTTGTACTTATTTTCTATTAAATTTTTTATAGTAGGTTTCACCTTTCTCAAACAATTATTTGAATTTATAGTGAAATTTTGAAAACAGAATAAGCTTATAAATACAATCAGCTTGATAATCATTTTGGCACCATTTATTTTTTGTTTTAGGATTTTAAAAATTAAGTTTAGGAACATTATTTCTATTTATTACTTTCTTTGTTTTGATATCTACCCTTTAAAGATGTTTTAAAAAATCAAGTCAAATTTTGAAAACTAAAAAGTAGTTTTTTTTTTAACTTCTTTTTTATGAACAATGGTAAAAAGTGGTTTTTTTTTGGAAAGCGGTTGAAGACGAAATCCATTTATAAAAAAGTGGATAATAAAACAAAGAAAATTTATATAGGAAAGAAGTATTCATAGAAATCAACCTCTGTAGTTTTGCAGAGTTTGAACACTCAAAACATTAAAAGAGCAGAAGCAGCAATGATGAGCATCTGGTGATGAAGGGGAGAGGTGTCTAAAGAAAAAGGTGACAGGCCAACCAGACCCCAACATCAACATGTAGTATCATCATGAATCCAGGTGCATGAACTCAGACCAAATCATTTTTCTCACTTGCTCTGTCCCCCTTTCCTTCCAATTATTTTTCACATCTTTATGGTTTTATTATGTTGACAATGACTATTGATGGTTCTGTGCTGTATGTTTCTTAATGTTCTAAACTGTGTAAAGTTTAACTTGTTTTTATCACATAAATTATTATTTTTTTTTTCTTTTTGAAAAATAGTTGGAGATACTTTGTTCTAGAGGAGGCTATGTTTTTAAACTAAAATTTAGGTTTAATTTTACAAAAACACCCCTGAACTTGGATAGGGTTCTTTATTCTTTTTTGGAAAAGACTATATAAAAGATTTAAGTTCATTATTGATCTTTAAAATGATTTACCTCAACAATTTATACATTAGTTGTCTCATCAATCTACATGAATGATTATAAATGATGTCACATATACCTTTCATTTTTATTTTTTATACCTGAGTCGTGCTTTGATTTTCAAAGGATAATTTTTTAAACAAATTTCAAAGTTCAAAAGTAAAGTTGAAACTTTTGAAAGTCTAGAATTGAAACCTACCATAAAATTCATGAGTATTTTGATAGTACAAGTACTATGCCAATTGAGCTATACTCATTTTTGGTGTATAATTTAATTAATTATTGAATGATCAATATGGTTATTAATGAACAGCTATTACCTTATTTATCTAGTTATTATGAACGAAAAGGTATAGAATTTAGCTTAACAAATCACAGGAATGATATCAGGTAATAGTTTATCAATTGACAGACTTTTTTTCCCCTTTGTGCATGCCAGATAATAAGGTCAAAAGTGATTGTGGTCAAGAAAGAAAACATTTTAAGTTAATTATGATTTTACTTTTAAGATTATTTAAAAAAGTGTTATGATTCTGCCTCAATCTTCTCGTCAATATTGGTACTGATTGAATAATAATATATAATCTCTCACTTGTTTATTCTTTTCATGCAATTAGGAAATGGGTTGAATAATATACTTTATAATACCATTCCATTTTGAGAAAATAAATACAGGAGAAGAGAAGTATTTTTGAAGTTACTTGCAAGTTGCAGCTTCATCTTTAATAGACTTAAAAGGGAGGTTTTTCAATAATCTTTTCTCCTTTGATGAAGGAAAGAGTAGATTGAAGGCAAGCACAGCTCATCTAGATAACAAACTCAGACAAGACCTTAGTCAAATTTCTATCATCAGTCATAAAAGAAAGAAAACTCGTTTTTTTTGAAAAAAAAAAAAAAAAAAAAACAAGAAATTGCATTTTAACTTTTGAGTAGTTTTATATTTAAAACAAATTGTATTATGAATAGTTTATATTTTGGAATAATGATTTACTCATAAACTGGTGTTTTGGATAAATTGTTTCTTGATATATTCTTTTGGGATGAAGTTTAAAATTTAAATTTACCATTATTTAAAATTATCGCAATTTTCTCTCCATCTTTATTTATTATTATTTTTTTTGGGATGGGAACTGTAGGTGTATCATTAAGTTTCAAAATGTTACACTTTTATTCCTTAATTTGTCTTCTCTTTAACCCAAAAGGGGAGTACTTAAAATTGTATTGTTCTATTAACATGTTATACTAATTGAAATAGATCTTAAAAGCATTTAGTATTGATTAATTAATTGCCTTCTGGTGAAGTACGAGTTTGACTATATAAAGATATTGGTTCCTTTTAAACAGGAAAATGAATTTAAATACTTGTCTGAAATATAAAATTAACATCTTTTTGGCTTGAAATTCTGTAGATTTGAATTTTCTTTAATATATGTGTTGGGAGTGTTGGGGCTTGGGAGTAAGGTTTCAAATTCGGATTGACATCAGATCGCCCATCCAATTGAAAACAAATTTCCATTTCTGTTTACTTTTATCTAATTTATTAGATATAAGTAAACAATAGAACACTATAATTTGGAGATTTTTATATGCATCTCATATTTCACGTCTAAAATACCATTTGATAGGTTTAAAACTAATAAAAAATAATATTTTGCTAGTATAAAAAAAATTGCCAATGCTTTTGTGAGATTGATGGAGGAAGAGCTCTAATGTGAGAGCAATATAGTATTAAATTAGTCCAACATGAGTGTGTGGAGGGAGGATGAGCGAGAGTGCGAGGGAGTGATACAAACAAAAGGTTATACATCATTATTTTTAAAATACAGATCAAATGACTTTTTGGTTATGAAATTTGGGTCATCCGTACAAAAATCTTCATAGCTCAACTTTCAATACTAAAATAAATTATAGTAGGTGTTAGATGATATGAAATTAAATTTATCTTCACACGTGAACTCTTTTGAGTCAATCGGTAATTTAAGAGTAAGAGTAGGACAGATTTTTTTGGTTCTTTAGAAAGTTCTTTAAGGACCCATTCTTCTTCTTCTTCTTCTAAAAGTGTAAATAATGTACTTTACAAAATTGTTAAATTGTTAGTAAGAAGTGTTATGGATAATTTTGGACCGAAGATATAATTGACATAAAACCGGAGATGAATTAATAGAGCCAAAAAATAAAAAGATTCGAGCAAAAAATAACGTCATATGACCAAAATGGACCTAGGAGAGAGAGTTTATTTGCGCCAAGACTGAAATTAATATGCTCAACCTCGATCAATGTCGAGGCCAAGTCTAAAAAAATGTTTAATGGGGTATACTTCTTGCATGCCTTGATTCAATGAGTGGTCATCTATTGTTATAAATACATTCTTATAACTTTAAGAAAAATAAGTCTATTCTCTAGTCACAAACTATTAACTTAGTGCAATGATACACTCCATAATTTAAGCATTGGAGTATGTATGGCAAGCACCATAACAATGCACAAATTTTTCTATTTTGTGAGTCATTTTCTTCTCCTTATCAAACAAATTTACTGTTATTATCATTCTTTTCCTTGTTCGAATTTTCACATTAACTTAAAGTATATTAATATTTTCAATATTGAAATAAATCTCCTTTCATAAGTAAAAGTATCCAAATAAACCTCTCCTAAATAAGTTTTAAAAAAAACCCTAAAAAGGAGGAGGTTTATCTCACAAAATCATGAATTTACCAATTAAAATAAAAACTATTTGAAATGTTATAAAATCTCAATAGCAATATTAATTTTTTGAATTCAAGAGGAACTTTTTTTTTTTTTTTTTTTTTGAGAAAACTTTTGCGTTGTTAATTAAAACAACACAATCAATAATTATTAAAGTCATTATTGCATTGCGACCTCAATAATTTATAATTATCGAAAATTATTTATTTATCCTACTCTTAGAAAAAAAAAATATATTTATCCGAACTGCCGAAGTACAGAGAAAGATCTCGTTCCCGCGAGGGAAGCTCGGATCAAACGAGAGGCTCTCCCTCTTTTCTCCTCAAAACCAACAAAAACCACTTTTCGTTTTCGCTCTCAATTCCAATTTTCTTCCATTTCTCCCTTCGTTTTCTGTTCTTCTCAATTTGAATCTGATTTTCAGAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTGAAATTTCTTTGTTCGTCGGCTGTTATTTTGAAATTTCTTTGAGATTTTGTTGGTTTTTGTATATTATCAGCGTTTTTTTTCCTTTTAACTATTTATTCGGTTCTTAGGGTTCTCATTTGATTTTTAATTTTTTTTTTTTTTTTATCGGCTTTGTCTTGTTCCGATTCAACCCAATTTCCCTAACTATAGTTGTAATCCTGGGTCCTGGTTCTAATTAGGTTCGGGTTCAAGGATGAATATTTTGCGGTGGCAGGGTTGAATAATTAAGAGCGGTTCTCTGATTTTCTTTTTAGTTATCTTTTACTTCATTTACAAGGTTTTGTTTGTTTAAATAAGCAGGGATAGGTGTTATATTACTTTCCCTTTTTCCACCTCTTCTTGTTACTATCTGTTCTCTCTTGGATTATTTTATTACTACTATGCTGATGAACTTTTGTTCTAGTCGCCTTTGGTGCTAAGTTAAGTTTTCTATGATAAATTGCATTTCTTCAACCCTTTCCCCCTCCTTTCAACTGACAGTGCTTCAACTTGTTAAAATGAACTTAAGTTCCCAAGTTTTCTGAATGAGAAATCACAACATTTACAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGGTATGTACTTGGATCTACTTTTGCAGGATTTGTGCATCTAGCACGAGTAATATGCATCGAATGGTTTTAACAAGGTTTTCTCAGTTAATAGATATTTTGATGTCTACCTTAATGTTTGAGGCTATTATGCTAACTGTTCCAGTTATGAGTAGCACTTTGAAATGTATGCCTAACTTCAAGACAAGTTCTTTGCATGTTTCAGAATTCCATTTGTGTTTGTACTTATCTACTAGATAGGTAAAGCCAGTGGGTATGCATTATGTAAATCCAATTTTTTCGTTAAATATATGAGTCAGTTGTAAGCAAGCATTTATTGCATGATTTATGAAGGGCTTTCAATGTAAAAAAATCTTTAAGTCTGTGATCACTGTTTTTCCTTGTACCACTGGTTATGTAAGCCAACAAATATAACAGTATTGGAAAAGAAAAACACAGATTCTGTTGACTAATATAAGAATACTAAGTTTGGGAATATGATCGCATGATCTATGGTTGGGTTGATTAAAAAGTAGGTTCTGTATATTTTTGCTTTCTTATAGTTTCTTTTTGTCAATGTTTTATTTATATGCACTACATGATGCTACATTCTTTTCTTGCCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTGAGGTCCTTTGCTTGCTTCCTTTTTGACCTTTGTGCAATAGAATACTCTTCATACATTTTAGATACTATCTGCAACCAGCGTATACTTCTAGATTCAAAAGGCATTTTCTTGTGCGATTATTTATTTCTAAGACAAATATAGAACCTACCCAGCCCAAACCGAAAAATGAACCTACCCCGTTGAATTTAACACTCAATTGCCTTGTGTGATTATGTATTTCTTAAGACAGCTGCTTTAACAAATGATTGGTCAGGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGAAAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGGTAAGACTAACTAATACATGAGCTATGAGCATTAATAAAAGTGAATGTTTGCTCATGTGATGCTTTTTGAGGATAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTATCTTTGTTTCCGTTGATAAAAGATGATCTACTAGATTTTGGATTGTTCATATACTCTGCCCATCTCTTTACCAAATTCAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGGTACTTCGAAATGAATTTTGTATTGATGACTATTTAGATTCAAATAGTAACCATCATGAGTTGACCATAAGAGTCATGAGTATAATAAAGAACTTAGAGAGAATGAGTTCATCCCATGGTGGACGCCTACCTAGAATTTAGTATTTTACGAGTTTTCTTGATCCCATTATGAGTCAACAACAAATATGCTTGTGAATAGCAGTCATCTGTTGCTCTACCATGTTACTTTGACGGTTATTATTTCATCCGTGCCTGTGTGTTCTTCTTTTATTCTACCTTGCACCTTTAATACGAGTAATAATAGAGGGTGTTGTTTGATGTTTGAGAAGGTTCTCTTAAATTAAACCTTTCTTTTTGTAACAAAGGGAGGGATTTTTTTTTGGCTATTTTGTGGGGCATCTGGCTTAAGAAGAATAGTAAAGTTCCTCCATGTGGGTGTTTGTTAATTTGGGTTCTTGTAATATCAACTTACCCTATTCTTGTATAGATGAAAGCATGGTTTCTTATTAAAAAAAGATAATAATCATTCTGGTTCCACTACTGTTATAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

mRNA sequence

ATGGACAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGAAAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

Coding sequence (CDS)

ATGGACAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGAAAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

Protein sequence

MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLASCRCSESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDHNEEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYELQAAIFKEALLSCLPITNDGSSSDKRKLKKKNCHVALLSRPTEQNCVSFLCCVDFAVKNPLGKMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWEDDEESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTTDNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQVIVPRSFASLDLSSLDLYALFKAQGLTKEMKLFDVVPFTGLFWENKRDGLHLAATLRSGAYEITRQVTTDYTETESA

Homology

[Close]

BLAST of HG10004079 vs. NCBI nr
Match: KAG6578858.1 (putative F-actin-capping protein subunit beta, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1018.5 bits (2632), Expect = 2.8e-293
Identity = 536/713 (75.18%), Postives = 559/713 (78.40%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLD+R   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LSS
Sbjct: 20  MDGAEHSLDYRGGTGAMETTSGTDEFQPFDGNLIGNLQSQLRLLQGRVKELEEENSNLSS 79

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLASC CS                                                    
Sbjct: 80  RLASCCCSERRMNFDDGSSSIEKSKKYGSLKDKTTKKKAVEKTPGYNTRILDHCSKRYIA 139

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRALEKARLL  GRKESCYSRCGRTDRGVSSVG
Sbjct: 140 LKVMYFGRRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDRGVSSVG 199

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN EE HDGEIDYVRV+NRVLP+DIRVLGWCTVP+GFSA
Sbjct: 200 QVIALYLRSNLKDPPNGENGNHNSEEHHDGEIDYVRVMNRVLPNDIRVLGWCTVPVGFSA 259

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 260 RFSCLRRKYKYLFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 319

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGN LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDP+ TPR
Sbjct: 320 DISPCDVRMEGNPLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPVRTPR 379

Query: 361 KPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYELQAAIFKEALLSCL 420
           KPQYVMASE+PLVLHSCEFEGVKFRCS+DAGEALQLHL+NEIRTYELQAAIFKEALLSCL
Sbjct: 380 KPQYVMASENPLVLHSCEFEGVKFRCSTDAGEALQLHLTNEIRTYELQAAIFKEALLSCL 439

Query: 421 PITNDGSSSDKRKLKKKNCHVALLSRPTE--------------QNCVSFLCCVDFAVKNP 480
           PITND S SD RK+KKK CHV LLSRPTE              +  VS  C      +  
Sbjct: 440 PITNDESFSDNRKIKKKICHVPLLSRPTEPSYEERRAKLNSSSKKIVSPSCAALILRRKT 499

Query: 481 LGKMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILC 540
              MEAAMGLMRRMPP+HSETALSALLTLLPHHSSDLLSQVDQPLQ LCDVDNGKEFILC
Sbjct: 500 QETMEAAMGLMRRMPPRHSETALSALLTLLPHHSSDLLSQVDQPLQALCDVDNGKEFILC 559

Query: 541 EYNRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMW 600
           EYNRDADSYRSPWSNKYHPPLEDG+MPSIE+RKLEIEANEVFTIYRDQYYEGGISSVYMW
Sbjct: 560 EYNRDADSYRSPWSNKYHPPLEDGSMPSIEMRKLEIEANEVFTIYRDQYYEGGISSVYMW 619

Query: 601 EDDEESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLS 610
           EDDEESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLS
Sbjct: 620 EDDEESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLS 679

[Close]

BLAST of HG10004079 vs. NCBI nr
Match: XP_038884605.1 (tRNA pseudouridine(38/39) synthase isoform X2 [Benincasa hispida])

HSP 1 Score: 599.4 bits (1544), Expect = 4.0e-167
Identity = 322/444 (72.52%), Postives = 333/444 (75.00%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLD+RE+  AIGM SGANEFQP   N I SLQSQLR LQGRVKELEEEN KLSS
Sbjct: 1   MDGAEHSLDYRESTEAIGMTSGANEFQPFNGNQIASLQSQLRLLQGRVKELEEENSKLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           R ASCRCS                                                    
Sbjct: 61  RFASCRCSERRMNFDDGSSSIGKSKESSTTKKKAVKKTAGYNTRILDHCSKRYIALKVMY 120

Query: 121 ------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISL 180
                             ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+L
Sbjct: 121 FGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIAL 180

Query: 181 YLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR---- 240
           YLRSNLKDPPNGENS HN EEQHDGEIDYVRVINR LP+DIRVLGWCTVP+GFSAR    
Sbjct: 181 YLRSNLKDPPNGENSYHNGEEQHDGEIDYVRVINRALPNDIRVLGWCTVPVGFSARFSCL 240

Query: 241 ----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPC 300
                      NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRRRIMSFDISPC
Sbjct: 241 RRKYKYFFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPC 300

Query: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYV 360
           DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILL+PL TPRKPQYV
Sbjct: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLNPLRTPRKPQYV 360

[Close]

BLAST of HG10004079 vs. NCBI nr
Match: XP_038884603.1 (tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida] >XP_038884604.1 tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida])

HSP 1 Score: 591.3 bits (1523), Expect = 1.1e-164
Identity = 321/447 (71.81%), Postives = 332/447 (74.27%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLD+RE+  AIGM SGANEFQP   N I SLQSQLR LQGRVKELEEEN KLSS
Sbjct: 1   MDGAEHSLDYRESTEAIGMTSGANEFQPFNGNQIASLQSQLRLLQGRVKELEEENSKLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           R ASCRCS                                                    
Sbjct: 61  RFASCRCSERRMNFDDGSSSIGKSKESSTTKKKAVKKTAGYNTRILDHCSKRYIALKVMY 120

Query: 121 ------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISL 180
                             ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+L
Sbjct: 121 FGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIAL 180

Query: 181 YLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR---- 240
           YLRSNLKDPPNGENS HN EEQHDGEIDYVRVINR LP+DIRVLGWCTVP+GFSAR    
Sbjct: 181 YLRSNLKDPPNGENSYHNGEEQHDGEIDYVRVINRALPNDIRVLGWCTVPVGFSARFSCL 240

Query: 241 ----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPC 300
                      NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRRRIMSFDISPC
Sbjct: 241 RRKYKYFFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPC 300

Query: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYV 360
           DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILL+PL TPRKPQYV
Sbjct: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLNPLRTPRKPQYV 360

[Close]

BLAST of HG10004079 vs. NCBI nr
Match: XP_022992675.1 (tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima] >XP_022992676.1 tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima])

HSP 1 Score: 573.9 bits (1478), Expect = 1.8e-159
Identity = 307/449 (68.37%), Postives = 326/449 (72.61%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LSS
Sbjct: 1   MDGAEHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKELEEENSNLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLASC CS                                                    
Sbjct: 61  RLASCYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIA 120

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVG
Sbjct: 121 LKVMYFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVG 180

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSA
Sbjct: 181 QVIALYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSA 240

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 241 RFSCLRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 300

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDP+ TPR
Sbjct: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPVRTPR 360

[Close]

BLAST of HG10004079 vs. NCBI nr
Match: XP_022992677.1 (tRNA pseudouridine(38/39) synthase isoform X2 [Cucurbita maxima])

HSP 1 Score: 571.2 bits (1471), Expect = 1.2e-158
Identity = 306/449 (68.15%), Postives = 325/449 (72.38%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVK LEEEN  LSS
Sbjct: 1   MDGAEHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKVLEEENSNLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLASC CS                                                    
Sbjct: 61  RLASCYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIA 120

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVG
Sbjct: 121 LKVMYFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVG 180

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSA
Sbjct: 181 QVIALYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSA 240

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 241 RFSCLRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 300

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDP+ TPR
Sbjct: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPVRTPR 360

[Close]

BLAST of HG10004079 vs. ExPASy Swiss-Prot
Match: Q9M9G7 (Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g71790 PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.5e-105
Identity = 184/230 (80.00%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 380 MEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYN 439
           MEAA+GL+RRMPPK SETALSALL+L+P HSSDLLSQVD PLQVL D+++GK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 440 RDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWEDD 499
           RDADSYRSPWSNKY PPLED   PS ELRKLE+EAN++F IYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 500 EESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTT 559
            E FV CFLIKKDGSK+GHGRRG L+EGAWDAIHVI+V  E+E  A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 560 DNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQV 610
           D+ ++G F LSGSIRRQMKM+L+VA+GHLCNMGRMIEE+E KLRNSLDQV
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQV 230

[Close]

BLAST of HG10004079 vs. ExPASy Swiss-Prot
Match: P14315 (F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus OX=9031 GN=CAPZB PE=1 SV=3)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-61
Identity = 124/236 (52.54%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 379 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 438
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 5   QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 64

Query: 439 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWED 498
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN  F  YRD Y+EGG+SSVY+W D
Sbjct: 65  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLW-D 124

Query: 499 DEESFVGCFLIKK--DGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEG-TASYCLTSTVML 558
            +  F G  LIKK  DGSK          +G WD+IHV+EV+ +  G TA Y LTSTVML
Sbjct: 125 LDHGFAGVILIKKAGDGSKK--------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVML 184

Query: 559 SLTTDNNAAGTFSLSGSIRRQMKMKLSVAEG--HLCNMGRMIEEMESKLRNSLDQV 610
            L T+   +GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 185 WLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEI 231

[Close]

BLAST of HG10004079 vs. ExPASy Swiss-Prot
Match: P79136 (F-actin-capping protein subunit beta OS=Bos taurus OX=9913 GN=CAPZB PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-61
Identity = 124/236 (52.54%), Postives = 169/236 (71.61%), Query Frame = 0


Query: 379 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 438
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 34  QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 93

Query: 439 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWED 498
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN  F  YRD Y+EGG+SSVY+W D
Sbjct: 94  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLW-D 153

Query: 499 DEESFVGCFLIKK--DGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEG-TASYCLTSTVML 558
            +  F G  LIKK  DGSK          +G WD+IHV+EV+ +  G TA Y LTSTVML
Sbjct: 154 LDHGFAGVILIKKAGDGSKK--------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVML 213

Query: 559 SLTTDNNAAGTFSLSGSIRRQMKMKLSVAE--GHLCNMGRMIEEMESKLRNSLDQV 610
            L T+ + +GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 214 WLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEI 260

[Close]

BLAST of HG10004079 vs. ExPASy Swiss-Prot
Match: P47756 (F-actin-capping protein subunit beta OS=Homo sapiens OX=9606 GN=CAPZB PE=1 SV=4)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-61
Identity = 124/236 (52.54%), Postives = 169/236 (71.61%), Query Frame = 0


Query: 379 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 438
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 5   QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 64

Query: 439 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWED 498
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN  F  YRD Y+EGG+SSVY+W D
Sbjct: 65  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLW-D 124

Query: 499 DEESFVGCFLIKK--DGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEG-TASYCLTSTVML 558
            +  F G  LIKK  DGSK          +G WD+IHV+EV+ +  G TA Y LTSTVML
Sbjct: 125 LDHGFAGVILIKKAGDGSKK--------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVML 184

Query: 559 SLTTDNNAAGTFSLSGSIRRQMKMKLSVAE--GHLCNMGRMIEEMESKLRNSLDQV 610
            L T+ + +GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 185 WLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEI 231

[Close]

BLAST of HG10004079 vs. ExPASy Swiss-Prot
Match: P47757 (F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-61
Identity = 124/236 (52.54%), Postives = 169/236 (71.61%), Query Frame = 0


Query: 379 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 438
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 5   QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 64

Query: 439 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWED 498
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN  F  YRD Y+EGG+SSVY+W D
Sbjct: 65  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLW-D 124

Query: 499 DEESFVGCFLIKK--DGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEG-TASYCLTSTVML 558
            +  F G  LIKK  DGSK          +G WD+IHV+EV+ +  G TA Y LTSTVML
Sbjct: 125 LDHGFAGVILIKKAGDGSKK--------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVML 184

Query: 559 SLTTDNNAAGTFSLSGSIRRQMKMKLSVAE--GHLCNMGRMIEEMESKLRNSLDQV 610
            L T+ + +GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 185 WLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEI 231

[Close]

BLAST of HG10004079 vs. ExPASy TrEMBL
Match: A0A6J1JWD4 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488950 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 8.7e-160
Identity = 307/449 (68.37%), Postives = 326/449 (72.61%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LSS
Sbjct: 1   MDGAEHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKELEEENSNLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLASC CS                                                    
Sbjct: 61  RLASCYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIA 120

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVG
Sbjct: 121 LKVMYFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVG 180

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSA
Sbjct: 181 QVIALYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSA 240

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 241 RFSCLRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 300

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDP+ TPR
Sbjct: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPVRTPR 360

[Close]

BLAST of HG10004079 vs. ExPASy TrEMBL
Match: A0A6J1JQK1 (tRNA pseudouridine(38/39) synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488950 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 5.7e-159
Identity = 306/449 (68.15%), Postives = 325/449 (72.38%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVK LEEEN  LSS
Sbjct: 1   MDGAEHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKVLEEENSNLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLASC CS                                                    
Sbjct: 61  RLASCYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIA 120

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVG
Sbjct: 121 LKVMYFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVG 180

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSA
Sbjct: 181 QVIALYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSA 240

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 241 RFSCLRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 300

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDP+ TPR
Sbjct: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPVRTPR 360

[Close]

BLAST of HG10004079 vs. ExPASy TrEMBL
Match: A0A6J1FEX0 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444871 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 2.2e-158
Identity = 307/449 (68.37%), Postives = 326/449 (72.61%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  EHSLD+R   GA+   SG +EFQP + NLI +LQS+LR LQGRVK LEEEN  LSS
Sbjct: 1   MDGAEHSLDYRGGTGAMETTSGTDEFQPFDGNLIGNLQSRLRLLQGRVKVLEEENSNLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
           RLA+C CS                                                    
Sbjct: 61  RLATCCCSERRMNFDDGSSSIEKSRKYGSLKDKTTKKKAVEKTPGYNTRILDHCSKRYIA 120

Query: 121 -----------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVG 180
                                  ESEIFRAL+KARLL  GRKESCYSRCGRTDRGVSSVG
Sbjct: 121 LKVMYFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDRGVSSVG 180

Query: 181 QVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSA 240
           QVI+LYLRSNLKDPPNGEN +HN EE HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSA
Sbjct: 181 QVIALYLRSNLKDPPNGENGNHNAEEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSA 240

Query: 241 R--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSF 300
           R               NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSF
Sbjct: 241 RFSCLRRKYKYLFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSF 300

Query: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPR 360
           DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPL TPR
Sbjct: 301 DISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLRTPR 360

[Close]

BLAST of HG10004079 vs. ExPASy TrEMBL
Match: A0A1S3C3Y8 (tRNA pseudouridine(38/39) synthase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496569 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 2.6e-156
Identity = 310/446 (69.51%), Postives = 322/446 (72.20%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  E   D  ET GAI     ANEFQP + N I SLQSQLR LQ RVKELEEEN KLSS
Sbjct: 1   MDGAELFTDITETTGAIRKTLEANEFQPFDGNQIASLQSQLRLLQDRVKELEEENSKLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
            LASC CS                                                    
Sbjct: 61  PLASCCCSERRMNFGDRSCSIEKSTESGTTKKKSVERTTGYNTRILDHCSKRYIALKVMY 120

Query: 121 ------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISL 180
                             ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+L
Sbjct: 121 FGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIAL 180

Query: 181 YLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR---- 240
           YLRSNLKDPPN ENS HN EEQHDGEIDYVRVIN+VLP+DIRVLGWC VP+GFSAR    
Sbjct: 181 YLRSNLKDPPNAENSCHNAEEQHDGEIDYVRVINKVLPNDIRVLGWCPVPVGFSARFSCL 240

Query: 241 ----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPC 300
                      NLD+    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISPC
Sbjct: 241 RRKYKYFFWGANLDI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISPC 300

Query: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYV 360
           DVR EGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPL TPRKPQYV
Sbjct: 301 DVRTEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLRTPRKPQYV 360

Query: 361 MASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYELQAAIFKEALLSCLPITND 362
           MASE+PLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTY+LQAAIFKEALLSCLP  ND
Sbjct: 361 MASENPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYKLQAAIFKEALLSCLP--ND 420

[Close]

BLAST of HG10004079 vs. ExPASy TrEMBL
Match: A0A1S3C3V2 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496569 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 4.5e-156
Identity = 310/444 (69.82%), Postives = 320/444 (72.07%), Query Frame = 0


Query: 1   MDRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSS 60
           MD  E   D  ET GAI     ANEFQP + N I SLQSQLR LQ RVKELEEEN KLSS
Sbjct: 1   MDGAELFTDITETTGAIRKTLEANEFQPFDGNQIASLQSQLRLLQDRVKELEEENSKLSS 60

Query: 61  RLASCRCS---------------------------------------------------- 120
            LASC CS                                                    
Sbjct: 61  PLASCCCSERRMNFGDRSCSIEKSTESGTTKKKSVERTTGYNTRILDHCSKRYIALKVMY 120

Query: 121 ------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISL 180
                             ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+L
Sbjct: 121 FGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIAL 180

Query: 181 YLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR---- 240
           YLRSNLKDPPN ENS HN EEQHDGEIDYVRVIN+VLP+DIRVLGWC VP+GFSAR    
Sbjct: 181 YLRSNLKDPPNAENSCHNAEEQHDGEIDYVRVINKVLPNDIRVLGWCPVPVGFSARFSCL 240

Query: 241 ----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPC 300
                      NLD+    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISPC
Sbjct: 241 RRKYKYFFWGANLDI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISPC 300

Query: 301 DVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYV 360
           DVR EGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPL TPRKPQYV
Sbjct: 301 DVRTEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLRTPRKPQYV 360

[Close]

BLAST of HG10004079 vs. TAIR 10
Match: AT1G71790.1 (Subunits of heterodimeric actin filament capping protein Capz superfamily )

HSP 1 Score: 384.0 bits (985), Expect = 2.5e-106
Identity = 184/230 (80.00%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 380 MEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYN 439
           MEAA+GL+RRMPPK SETALSALL+L+P HSSDLLSQVD PLQVL D+++GK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 440 RDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWEDD 499
           RDADSYRSPWSNKY PPLED   PS ELRKLE+EAN++F IYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 500 EESFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTT 559
            E FV CFLIKKDGSK+GHGRRG L+EGAWDAIHVI+V  E+E  A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 560 DNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQV 610
           D+ ++G F LSGSIRRQMKM+L+VA+GHLCNMGRMIEE+E KLRNSLDQV
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQV 230

[Close]

BLAST of HG10004079 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 344.0 bits (881), Expect = 2.8e-94
Identity = 190/409 (46.45%), Postives = 243/409 (59.41%), Query Frame = 0


Query: 35  VSLQSQLRFLQGRVKELEEENLKLSSRLASCRCS-------------------------- 94
           ++ +++L FL+ RVKELE EN KL S+++SC+C                           
Sbjct: 19  IAKETELVFLRNRVKELEVENAKLLSQVSSCQCQQMEVKHDRSLSDSSSLVRRRRVRKGD 78

Query: 95  --------------------------------------ESEIFRALEKARLLGVGRKESC 154
                                                 ESE+F+ALE+ RLL   +K+SC
Sbjct: 79  KNSIPSHLISKRYVALKIMYFGKRFYGFSAEAQMEPSIESEVFKALERTRLLVGDKKDSC 138

Query: 155 YSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDHNEEQHD-GEIDYVRVINRVLPSD 214
           YSRCGRTD+GVSS GQVI+L+LRS LK PP    +  N    +  E DYVRV+NR LP D
Sbjct: 139 YSRCGRTDKGVSSTGQVIALFLRSRLKSPPGDSKAQVNGRTGERPEYDYVRVLNRALPDD 198

Query: 215 IRVLGWCTVPIGFSA--------------RNNLDLHFHQAMERAGKKFVGEHDFRNFCKM 274
           IRV+GW   PI F A              R NL+L    AM+ AGKKF+GEHDFRNFCKM
Sbjct: 199 IRVIGWSPAPIDFHARFSCYAREYKYFFWRQNLNL---SAMDFAGKKFIGEHDFRNFCKM 258

Query: 275 NAANVHNYRRRIMSFDISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLED 334
           + ANVH Y RR+  F++SPC    EG+ L  F + GSAFLWHQ+RCMVAV+FM+GQG+E 
Sbjct: 259 DVANVHCYTRRVTFFEVSPCQNSHEGDQLCTFTMRGSAFLWHQIRCMVAVLFMIGQGVES 318

Query: 335 PDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTY 360
            DV+D LLD   TPRKPQY++ASE PLVL +CEFE V F CS  A E+L+ H  NE  TY
Sbjct: 319 VDVIDTLLDTKKTPRKPQYLLASEIPLVLRTCEFENVDFICSPGAAESLRSHFKNESLTY 378

[Close]

BLAST of HG10004079 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 63.2 bits (152), Expect = 9.6e-10
Identity = 75/267 (28.09%), Postives = 107/267 (40.07%), Query Frame = 0


Query: 60  SRLASCRCSES--EIFRALEKA--RLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSN 119
           +R A  +  ES   I   LEKA  ++  +GRKE      GRTD GV + GQV      ++
Sbjct: 52  TRFAGWQYQESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQV------AH 111

Query: 120 LKDPPNGENSDHNEEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQ- 179
              P N  + D           +   +N +LP DIRV         F AR +     ++ 
Sbjct: 112 FVTPFNYTSLD----------SFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRY 171

Query: 180 --------------------------AMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIM 239
                                      M  A   FVG+HDF  F   NA         + 
Sbjct: 172 QIYNDTFMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFSAFA--NATREDGVPDPLK 231

Query: 240 SFDISPCDVRMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLST 296
           +  IS  DV   G+LL    +EGS FL+ QVR MVA++  +G+   D D+V ++L+    
Sbjct: 232 T--ISRFDVIQMGSLL-QLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILETKDR 291

The following BLAST results are available for this feature:

BLAST of HG10004079 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578858.1	2.8e-293	75.18	putative F-actin-capping protein subunit beta, partial [Cucurbita argyrosperma s...	[more]
XP_038884605.1	4.0e-167	72.52	tRNA pseudouridine(38/39) synthase isoform X2 [Benincasa hispida]	[more]
XP_038884603.1	1.1e-164	71.81	tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida] >XP_038884604....	[more]
XP_022992675.1	1.8e-159	68.37	tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima] >XP_022992676.1...	[more]
XP_022992677.1	1.2e-158	68.15	tRNA pseudouridine(38/39) synthase isoform X2 [Cucurbita maxima]	[more]

BLAST of HG10004079 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G7	3.5e-105	80.00	Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana OX=3702 GN...	[more]
P14315	1.1e-61	52.54	F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus OX=9031 G...	[more]
P79136	1.4e-61	52.54	F-actin-capping protein subunit beta OS=Bos taurus OX=9913 GN=CAPZB PE=1 SV=1	[more]
P47756	1.4e-61	52.54	F-actin-capping protein subunit beta OS=Homo sapiens OX=9606 GN=CAPZB PE=1 SV=4	[more]
P47757	1.4e-61	52.54	F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3	[more]

BLAST of HG10004079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWD4	8.7e-160	68.37	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1JQK1	5.7e-159	68.15	tRNA pseudouridine(38/39) synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FEX0	2.2e-158	68.37	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3C3Y8	2.6e-156	69.51	tRNA pseudouridine(38/39) synthase isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3C3V2	4.5e-156	69.82	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of HG10004079 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71790.1	2.5e-106	80.00	Subunits of heterodimeric actin filament capping protein Capz superfamily	[more]
AT1G34150.1	2.8e-94	46.45	Pseudouridine synthase family protein	[more]
AT3G06950.1	9.6e-10	28.09	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..68
None	No IPR available	PANTHER	PTHR11142:SF5	TRNA PSEUDOURIDINE(38/39) SYNTHASE	coord: 69..362
IPR001698	F-actin-capping protein subunit beta	PRINTS	PR00192	FACTINCAPB	coord: 471..498 score: 62.05 coord: 431..457 score: 75.46 coord: 590..616 score: 36.57 coord: 379..399 score: 41.67 coord: 400..421 score: 56.25
IPR001698	F-actin-capping protein subunit beta	PFAM	PF01115	F_actin_cap_B	coord: 380..611 e-value: 3.1E-88 score: 295.5
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 55..165 e-value: 2.8E-19 score: 71.3
IPR043175	F-actin-capping protein subunit beta, N-terminal domain	GENE3D	1.20.58.570		coord: 378..463 e-value: 9.8E-37 score: 126.9
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 180..290 e-value: 7.1E-29 score: 100.4
IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	GENE3D	3.90.1150.210		coord: 464..632 e-value: 2.1E-53 score: 183.0
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 166..330 e-value: 2.3E-38 score: 133.7
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 69..362
IPR019771	F-actin capping protein, beta subunit, conserved site	PROSITE	PS00231	F_ACTIN_CAPPING_BETA	coord: 436..441
IPR037282	F-actin-capping protein subunit alpha/beta	SUPERFAMILY	90096	Subunits of heterodimeric actin filament capping protein Capz	coord: 379..611
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 69..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004079.1	HG10004079.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051016	barbed-end actin filament capping
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0008290	F-actin capping protein complex
molecular_function	GO:0003779	actin binding
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding