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HG10004070 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTTATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGCCGGAGAGTGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTGCTATATGGCAGAAGAACATACTCATGGGTGGGAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTGCTTTACTCACCTGGAAGTGA ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTTATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGCCGGAGAGTGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTGCTATATGGCAGAAGAACATACTCATGGGTGGGAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTGCTTTACTCACCTGGAAGTGA ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTTATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGCCGGAGAGTGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTGCTATATGGCAGAAGAACATACTCATGGGTGGGAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTGCTTTACTCACCTGGAAGTGA MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK Homology
BLAST of HG10004070 vs. NCBI nr
Match: XP_038886392.1 (uncharacterized protein LOC120076591 [Benincasa hispida]) HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74 Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of HG10004070 vs. NCBI nr
Match: XP_023512486.1 (uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 hypothetical protein SDJN03_07439, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032888.1 hypothetical protein SDJN02_06938, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68 Identity = 128/144 (88.89%), Postives = 134/144 (93.06%), Query Frame = 0
BLAST of HG10004070 vs. NCBI nr
Match: XP_011656615.1 (uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_004865 [Cucumis sativus]) HSP 1 Score: 267.7 bits (683), Expect = 5.8e-68 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of HG10004070 vs. NCBI nr
Match: XP_022959632.1 (uncharacterized protein LOC111460648 [Cucurbita moschata]) HSP 1 Score: 264.2 bits (674), Expect = 6.4e-67 Identity = 126/144 (87.50%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of HG10004070 vs. NCBI nr
Match: XP_022990795.1 (uncharacterized protein LOC111487577 [Cucurbita maxima]) HSP 1 Score: 263.8 bits (673), Expect = 8.3e-67 Identity = 126/144 (87.50%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of HG10004070 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.8e-68 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of HG10004070 vs. ExPASy TrEMBL
Match: A0A6J1H530 (uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC111460648 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 3.1e-67 Identity = 126/144 (87.50%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of HG10004070 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67 Identity = 126/144 (87.50%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of HG10004070 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65 Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of HG10004070 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65 Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of HG10004070 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21 Identity = 57/135 (42.22%), Postives = 73/135 (54.07%), Query Frame = 0
BLAST of HG10004070 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
BLAST of HG10004070 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of HG10004070 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05 Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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