HG10004025 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004025
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine decarboxylase
LocationChr08: 12923251 .. 12927634 (+)
RNA-Seq ExpressionHG10004025
SyntenyHG10004025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGCAGCGTGATGGGGATGGGTGAGAATAACGGTGGGGCGGAGGTTATGAACGGAAATTTTGATACAAATGTTGTGTTTTCCGAGCCTCTGCCGCCGTTGGCGGTGACCAACAACGGCGTGGATCTCAATGGACAACAACACGGAGACTCGAATCAGAAAGGGAAGAGGGAGATTGTGCTCGGCAGAAATGTCCATACCACTTGCTTATCCATCACCGAGCCTGACGCCAATGACGAGTCTACCGGCGATAAGGAAGCGTACATGGCTAGCGTCTTGGCTCGCTATAGAAAGAATCTCCTCGAGAGGACTAAATATCATTTAGGTTTTTTGTTTGTTTGTTTTTTTTTTCTTTTGATAAACCTGTGTCTTGTTTCCGTTTAGGAAATTGAAATTTTCGTTGTTCTGATTTGGATTTGGATTTTACTCTGTTTTTGTTTTAGGGTACCCTTATAATTTGGACTTCGATTACGGGGCTCTAGGGCAGTTGCAGCATTTCTCAATTAACAATCTTGGCGATCCGTTCATTGAAAGTAATTACGGTGTGCATTCGAGGCAGTTTGAGGTTGGGGTGTTGGATTGGTTTGCTCGCCTTTGGGAGATTGAGAAAAATGAGTATTGGGGATATATTACAAATTGTGGTACGGAAGGCAATCTTCATGGGATTCTCGTCGGGTTAGTTTCATTGAGTTTTTTACTTCCTGTTTCGTATCGTGTTAATGCATGCTCTTCTTTTTAGCAGTAGTGAAACTTTAGGCATTGATTCTTGTAGGAGAGAAGTTTTGCCGGATGGGATTCTATATGCTTCTCGGGAATCTCATTATTCCGTTTTCAAAGCCGCTAGAATGTATAGAATGGACTGTGTGAAGGTTGACACTCTGATATCTGGTGAGATCGATTGTGCTGACCTTAGAGTTAAGTTGCTTGCTAACAAAGACAAACCAGCTATACTCAATGTTAATATTGGTAATTTCTCTCTCTCTTTCTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAGCAGGGGAATATATTCGGTTTATTTGTGAGAATTGAGTGGATTCTTGTGTCAGGAACCACGGTGAAGGGAGCTGTTGATGATCTTGATCTGGTGATACAAACACTTAATGATTGTGGGTTCTCTAAAGATCGGTTCTACATCCATTGTGATGGTGCATTGTTTGGACTTATGATGCCTTTTGTCAAACGTGTAAGTCACTTTCTTGCCTACTAATAATAATTCACTGGGTCGTGTTTCTAGCTTCGTTGTTCTTTTCTTTGCTGCTTACAACTTACAAGGCGTACATATATGTGTGGCAGTCGATGGTACGCTCAAGTTTAATTGCATCAAGATAGAAATTCATGTAGGCTTTGTACTGACTTGAAGGAACTTGGTTGCAATACAATTTGGGTCCTGGTTTGATAGACTTGGAGTTTTTCCAATGAGCTAAGCTCTAAATGCTAGTTAGAATTCCCACAACCACCCTCATCCCTCTTTTGGCTATGTAGAAATATCTATTTTCTTCTACATCAAGTTACTGCTTCTTTTTTCCTTTCTGGGTTTTTCCTCCTGCCTTCTAACTATCATTAAGGATGGCTGCTTGTGCAGCTGCTACTATCCTTACCTTAATCCTTGGTTGATAACTGTCCTCCTATCCAATCAATGTTATCTGACCTTCACACCCTAATCGAACTTTCATGGAGAAAAATGAAAGAATACTAAGACATACATACAAAAAAGGGAAGCTCACAAAAAGGGGGACAGCCTACAAAAATGGCCTCTGATCCAACAAAATAAGACCTAAGGAATGATTTAAAAAAGACTTAGCCACAGATGCCTATAGCGCCACGTTGAACCTATTACAGGACCAAAACTCATTGAAAGGCTTTTCATACCCCTTAATAATTCTATTGTTTCTTTCTCTCCAAAGCTCCCATACAATGACACAAACCTCAGTTTGCCATAAAAACCTTTATTTCTCACAGAAAGGAGGATGGAGAAGAATCTCCTCATCTCTTTGCAGCTTCTATGCCTAGCCAAGCCTTTACCAAACCCCTAAAAAAATGACTCCATATTGCGTAAGCAAAATCACAACCACAGAATATGATCAAGATCATCCGTCGCTCCCCTACAAAAGAGGCCTCATCAAGTTTGGGCATCCTCCTCAAAACCCTATCCAAGGTGTTAATACTTCTATGGAGAACCTGCTAGACATAAACTTAACATTGTCGAGAATTTTCACCTTTACACCCACTAGTTCCAAAGAATACTTGCCCTTTATCGAACCTTAACACCCATTCACGCCGAAGAACACTCCCTTTGTCTTACTGCAGCAGCGAGCACCAAATTGGCTAGGTCTTCTTCCTCAAGTCTTTTCATGATCATTCAAATTAATTTCCAGCAAGTGTTCTTTGAGTATCTTCAAATTTGTGAAGAAATCTCTTCCCATATTGAGCGACATGGATTCAGTTGACTTCTCTAAAGCCAGAAACCTCTGAATTTCCAGCTCTAATTCTAGATGTTTATCAAACAACAACTTCTTTTTTTTTTGGTGCCATTTGGTTCTCTCTTCCCAGGATGTTGCTCTGATACTAATTTGTAAGATATCACTTTACAAAAGAGAAAGTAAAGCGTAGTAAATGAAGTGAGAAAGGATAATAGCATTTTGAGAGAGGCACTCTCCCAAAGACTTAAATTTCCTTAAAATTATTTCCTGCCTCCTTCGCTTAACCTGACCGACTAAATATGAAAAAAAAACTGGGGCCTAACACTAGGACCCGAATACCAATATTCATCTTACTCCTAACAGCCTTAAAATGAACAATCATACTATTAATTAGCTGGCCCATCTCTTTTTCCTAATATAGATGTCAGTAATCGGAGGCCTGATAGGAGGTTCTGATTCAATGGATTTGGCAACAACCAAAAGAGGCCACATCAGGTTTGACCTAATCTAGCTTTTACGATGAAAAAAGAAAAGAAAAGACTTAATAACTATCCATTTCTGACCTTCCACCTTGAGGGTAAGGTGAAAGTTTAAATGGCAGTGTTGATAGGAACCTTATGCCTCCCATTGTAAGTGGTACTGATTCCTCAGTGAGAGCTGCCCCTAATACAAACTACTGTTTGGGAGGTTCGCCCATTATCCTCAGACCCTGCACACAAGGCTTGGAGGTTCTGATTAAATGGATTTGGCAACAACCAAAAGAGGCTACATTGGAGGTTTTTGACTATCAGTTTGTGACCTTTCCCACCTCGACGGTAAGGTGAAACTTGAAAGTTTGGGTGGCAGTGTTGATGGGAACCCATTCACTTTATGTATGCTTGAAGAAGAGGGTGAACAGGGAGCAGTCTTTTCTGTAAACTATTAGATGCCGTGAGCCCATTGAACCATGGGTATTGTGTTAGCTAGTCTATCGGACTCGGGAGTAATTATTGTATATTTCCTAGCTTATATAGAGTGTCAGGCCTCTCAATGTCCTTTGGTCTGCATCTCTTTTTTAACCCTCGAGTGTTAACCGTACTAGCTGTGCTTGACTTCTATCACTGCTCCTGCCAAGCCACTGCTCCTATTCTACATTCAATTCTTTCCTGCCAGTAAATACTTTCTTTTGTTGTTAGTTGACTTCTTTTACCATTTTAGTGAATCAAATGGAAGGGATACTTCTGATTTCCTTTTGGTTTTATATTCACCTTCAGGCTTCAGCATTCTGTCTCACCTGAAATGAAAGCAAATATAGAACTGCATTTTATTGCTTGTAATTTTCAGTATTCTATCCCGGCTCACTAGTTTTGTTTTTGAGCAGGCACCAAAGGTCTCGTTTAAGAAGCCTATCGGAAGTGTTAGTGTTTCTGGCCACAAGTTCGTTGGATGTCCAATGCCTTGTGGTATTCAGCTTACAAGGTTGGAGCATATAAATGCCCTCTCCAGTAATGTTGAGTATCTAGCCTCAAGAGATGCCACAATCATGGGAAGTCGGAATGGCCATGCTCCTATCTTCCTTTGGTACACCCTTAACAGAAAAGGCTATAAAGGTTTCCAAAAGGAAGTCCAGAAATGTCTCAGAAATGCACACTACCTGAAAGACCGACTTCTTGACGAGGGAATTAGTGCGATGCTGAATGAACTCAGCAGCACAGTTGTGTTTGAACGACCCCGAGATGAAGAGTTTATCCGGAGGTGGCAGCTAGCTTGCGAGGGAAATATTGCCCATGTCGTGGTAATGCCCAGCGTTAGCCAAGAGAAGCTGGACGATTTCCTAGCCGAATTGGTTGAGAAACGCTCAACTTGGTACAAAGATGAGAACGTTCAACCTCCTTGTGTCGCAGCTGAGTTGGGAAGTGAGAGCTGTGCTTGTAAGTTGCACAGGAGTTGA

mRNA sequence

ATGGTTGGCAGCGTGATGGGGATGGGTGAGAATAACGGTGGGGCGGAGGTTATGAACGGAAATTTTGATACAAATGTTGTGTTTTCCGAGCCTCTGCCGCCGTTGGCGGTGACCAACAACGGCGTGGATCTCAATGGACAACAACACGGAGACTCGAATCAGAAAGGGAAGAGGGAGATTGTGCTCGGCAGAAATGTCCATACCACTTGCTTATCCATCACCGAGCCTGACGCCAATGACGAGTCTACCGGCGATAAGGAAGCGTACATGGCTAGCGTCTTGGCTCGCTATAGAAAGAATCTCCTCGAGAGGACTAAATATCATTTAGGGTACCCTTATAATTTGGACTTCGATTACGGGGCTCTAGGGCAGTTGCAGCATTTCTCAATTAACAATCTTGGCGATCCGTTCATTGAAAGTAATTACGGTGTGCATTCGAGGCAGTTTGAGGTTGGGGTGTTGGATTGGTTTGCTCGCCTTTGGGAGATTGAGAAAAATGAGTATTGGGGATATATTACAAATTGTGGTACGGAAGGCAATCTTCATGGGATTCTCGTCGGCAGTAGTGAAACTTTAGGCATTGATTCTTGTAGGAGAGAAGTTTTGCCGGATGGGATTCTATATGCTTCTCGGGAATCTCATTATTCCGTTTTCAAAGCCGCTAGAATGTATAGAATGGACTGTGTGAAGGTTGACACTCTGATATCTGGTGAGATCGATTGTGCTGACCTTAGAGTTAAGTTGCTTGCTAACAAAGACAAACCAGCTATACTCAATGTTAATATTGGAACCACGGTGAAGGGAGCTGTTGATGATCTTGATCTGGTGATACAAACACTTAATGATTGTGGGTTCTCTAAAGATCGGTTCTACATCCATTGTGATGGTGCATTGTTTGGACTTATGATGCCTTTTGTCAAACGTATGTCAGTAATCGGAGGCCTGATAGGAGGTTCTGATTCAATGGATTTGGCAACAACCAAAAGAGGCCACATCAGTGTTGATAGGAACCTTATGCCTCCCATTGTAAGTGGTACTGATTCCTCAGTGAGAGCTGCCCCTAATACAAACTACTGTTTGGGAGGTTCGCCCATTATCCTCAGACCCTGCACACAAGGCTTGGAGGTTCTGATTAAATGGATTTGGCAACAACCAAAAGAGGCTACATTGGAGGTTTTTGACTATCAGTTTGTGACCTTTCCCACCTCGACGGCACCAAAGGTCTCGTTTAAGAAGCCTATCGGAAGTGTTAGTGTTTCTGGCCACAAGTTCGTTGGATGTCCAATGCCTTGTGGTATTCAGCTTACAAGGTTGGAGCATATAAATGCCCTCTCCAGTAATGTTGAGTATCTAGCCTCAAGAGATGCCACAATCATGGGAAGTCGGAATGGCCATGCTCCTATCTTCCTTTGGTACACCCTTAACAGAAAAGGCTATAAAGGTTTCCAAAAGGAAGTCCAGAAATGTCTCAGAAATGCACACTACCTGAAAGACCGACTTCTTGACGAGGGAATTAGTGCGATGCTGAATGAACTCAGCAGCACAGTTGTGTTTGAACGACCCCGAGATGAAGAGTTTATCCGGAGGTGGCAGCTAGCTTGCGAGGGAAATATTGCCCATGTCGTGGTAATGCCCAGCGTTAGCCAAGAGAAGCTGGACGATTTCCTAGCCGAATTGGTTGAGAAACGCTCAACTTGGTACAAAGATGAGAACGTTCAACCTCCTTGTGTCGCAGCTGAGTTGGGAAGTGAGAGCTGTGCTTGTAAGTTGCACAGGAGTTGA

Coding sequence (CDS)

ATGGTTGGCAGCGTGATGGGGATGGGTGAGAATAACGGTGGGGCGGAGGTTATGAACGGAAATTTTGATACAAATGTTGTGTTTTCCGAGCCTCTGCCGCCGTTGGCGGTGACCAACAACGGCGTGGATCTCAATGGACAACAACACGGAGACTCGAATCAGAAAGGGAAGAGGGAGATTGTGCTCGGCAGAAATGTCCATACCACTTGCTTATCCATCACCGAGCCTGACGCCAATGACGAGTCTACCGGCGATAAGGAAGCGTACATGGCTAGCGTCTTGGCTCGCTATAGAAAGAATCTCCTCGAGAGGACTAAATATCATTTAGGGTACCCTTATAATTTGGACTTCGATTACGGGGCTCTAGGGCAGTTGCAGCATTTCTCAATTAACAATCTTGGCGATCCGTTCATTGAAAGTAATTACGGTGTGCATTCGAGGCAGTTTGAGGTTGGGGTGTTGGATTGGTTTGCTCGCCTTTGGGAGATTGAGAAAAATGAGTATTGGGGATATATTACAAATTGTGGTACGGAAGGCAATCTTCATGGGATTCTCGTCGGCAGTAGTGAAACTTTAGGCATTGATTCTTGTAGGAGAGAAGTTTTGCCGGATGGGATTCTATATGCTTCTCGGGAATCTCATTATTCCGTTTTCAAAGCCGCTAGAATGTATAGAATGGACTGTGTGAAGGTTGACACTCTGATATCTGGTGAGATCGATTGTGCTGACCTTAGAGTTAAGTTGCTTGCTAACAAAGACAAACCAGCTATACTCAATGTTAATATTGGAACCACGGTGAAGGGAGCTGTTGATGATCTTGATCTGGTGATACAAACACTTAATGATTGTGGGTTCTCTAAAGATCGGTTCTACATCCATTGTGATGGTGCATTGTTTGGACTTATGATGCCTTTTGTCAAACGTATGTCAGTAATCGGAGGCCTGATAGGAGGTTCTGATTCAATGGATTTGGCAACAACCAAAAGAGGCCACATCAGTGTTGATAGGAACCTTATGCCTCCCATTGTAAGTGGTACTGATTCCTCAGTGAGAGCTGCCCCTAATACAAACTACTGTTTGGGAGGTTCGCCCATTATCCTCAGACCCTGCACACAAGGCTTGGAGGTTCTGATTAAATGGATTTGGCAACAACCAAAAGAGGCTACATTGGAGGTTTTTGACTATCAGTTTGTGACCTTTCCCACCTCGACGGCACCAAAGGTCTCGTTTAAGAAGCCTATCGGAAGTGTTAGTGTTTCTGGCCACAAGTTCGTTGGATGTCCAATGCCTTGTGGTATTCAGCTTACAAGGTTGGAGCATATAAATGCCCTCTCCAGTAATGTTGAGTATCTAGCCTCAAGAGATGCCACAATCATGGGAAGTCGGAATGGCCATGCTCCTATCTTCCTTTGGTACACCCTTAACAGAAAAGGCTATAAAGGTTTCCAAAAGGAAGTCCAGAAATGTCTCAGAAATGCACACTACCTGAAAGACCGACTTCTTGACGAGGGAATTAGTGCGATGCTGAATGAACTCAGCAGCACAGTTGTGTTTGAACGACCCCGAGATGAAGAGTTTATCCGGAGGTGGCAGCTAGCTTGCGAGGGAAATATTGCCCATGTCGTGGTAATGCCCAGCGTTAGCCAAGAGAAGCTGGACGATTTCCTAGCCGAATTGGTTGAGAAACGCTCAACTTGGTACAAAGATGAGAACGTTCAACCTCCTTGTGTCGCAGCTGAGTTGGGAAGTGAGAGCTGTGCTTGTAAGTTGCACAGGAGTTGA

Protein sequence

MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREIVLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS
Homology
[Close]
BLAST of HG10004025 vs. NCBI nr
Match: XP_038886253.1 (serine decarboxylase isoform X1 [Benincasa hispida] >XP_038886254.1 serine decarboxylase isoform X1 [Benincasa hispida])

HSP 1 Score: 925.6 bits (2391), Expect = 2.1e-265
Identity = 468/592 (79.05%), Postives = 476/592 (80.41%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGS MGMGE NGGAEV+ GNFDTNVVFSEPLP LA  NNGVDLNGQQHGDSNQKGKREI
Sbjct: 1   MVGSAMGMGEINGGAEVLIGNFDTNVVFSEPLPSLAENNNGVDLNGQQHGDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN
Sbjct: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYASRESHYSVFKAARMYRMDCVKVDTL+SGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLVSGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           C DLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTL +CGFSK+RFYIHCDGALFG
Sbjct: 241 CVDLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLTECGFSKNRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR+                                                   
Sbjct: 301 LMMPFVKRL--------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 -------------------------------------------MAPKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 487

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           VVVMP+VSQEKLDDFLAELVEKRSTWY+DENVQPPCVAAELGS SCACKLHR
Sbjct: 541 VVVMPNVSQEKLDDFLAELVEKRSTWYEDENVQPPCVAAELGSGSCACKLHR 487

[Close]
BLAST of HG10004025 vs. NCBI nr
Match: XP_038886255.1 (serine decarboxylase isoform X2 [Benincasa hispida])

HSP 1 Score: 924.5 bits (2388), Expect = 4.7e-265
Identity = 468/592 (79.05%), Postives = 475/592 (80.24%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGS MGMGE NGGAEV+ GNFDTNVVFSEPLP LA  NNGVDLNGQQHGDSNQKGKREI
Sbjct: 1   MVGSAMGMGEINGGAEVLIGNFDTNVVFSEPLPSLAENNNGVDLNGQQHGDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN
Sbjct: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYASRESHYSVFKAARMYRMDCVKVDTL+SGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLVSGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           C DLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTL +CGFSK+RFYIHCDGALFG
Sbjct: 241 CVDLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLTECGFSKNRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 485

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           VVVMP+VSQEKLDDFLAELVEKRSTWY+DENVQPPCVAAELGS SCACKLHR
Sbjct: 541 VVVMPNVSQEKLDDFLAELVEKRSTWYEDENVQPPCVAAELGSGSCACKLHR 485

[Close]
BLAST of HG10004025 vs. NCBI nr
Match: XP_011656639.1 (serine decarboxylase isoform X1 [Cucumis sativus] >XP_031742680.1 serine decarboxylase isoform X1 [Cucumis sativus] >KAE8646673.1 hypothetical protein Csa_005252 [Cucumis sativus])

HSP 1 Score: 924.1 bits (2387), Expect = 6.2e-265
Identity = 467/593 (78.75%), Postives = 478/593 (80.61%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGSVMGMGENNGGAEV+ G FDTN+VFS+PLPPLAV+NNG+DLNGQQH DSNQKGKREI
Sbjct: 1   MVGSVMGMGENNGGAEVLIGKFDTNLVFSDPLPPLAVSNNGLDLNGQQHVDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           AL QLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN
Sbjct: 121 ALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYASRE+HYSVFKAARMYRMDCVKV TLISGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASRETHYSVFKAARMYRMDCVKVGTLISGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFSKDRFYIHCDGALFG
Sbjct: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSKDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDVGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 486

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMPSVSQEKLDDFL++LVEKRSTWY  ENVQPPCVAAELG+ESCACKLHRS
Sbjct: 541 VVVMPSVSQEKLDDFLSDLVEKRSTWYDGENVQPPCVAAELGNESCACKLHRS 486

[Close]
BLAST of HG10004025 vs. NCBI nr
Match: XP_008441525.1 (PREDICTED: serine decarboxylase [Cucumis melo])

HSP 1 Score: 922.2 bits (2382), Expect = 2.3e-264
Identity = 467/593 (78.75%), Postives = 478/593 (80.61%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGSVMGMGENNGGAEV+ G FDTN+VFS+PLPPLAV+NNG+DLNGQQH DSNQKGKREI
Sbjct: 1   MVGSVMGMGENNGGAEVLIGKFDTNLVFSDPLPPLAVSNNGLDLNGQQHVDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHT+CLSITEPDANDESTGDKEAYMASVLARYRK+LLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTSCLSITEPDANDESTGDKEAYMASVLARYRKSLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           AL QLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN
Sbjct: 121 ALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVL DGILYASRESHYSVFKAARMYRMDCVKV TLISGEID
Sbjct: 181 LHGILVG-----------REVLSDGILYASRESHYSVFKAARMYRMDCVKVGTLISGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFSKDRFYIHCDGALFG
Sbjct: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSKDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEG+IAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPRDEEFIRRWQLACEGSIAH 486

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMPSVSQEKLDDFLAELVEKRSTWY DENVQPPCVAAELG+ESCACKLHRS
Sbjct: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYDDENVQPPCVAAELGNESCACKLHRS 486

[Close]
BLAST of HG10004025 vs. NCBI nr
Match: XP_031743415.1 (LOW QUALITY PROTEIN: serine decarboxylase-like [Cucumis sativus])

HSP 1 Score: 916.8 bits (2368), Expect = 9.8e-263
Identity = 464/593 (78.25%), Postives = 475/593 (80.10%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGSVMGMGENNGGAEV+ G FDTN+VFS+PLPPLAV+NNG+DLNGQQH DSNQKGKREI
Sbjct: 1   MVGSVMGMGENNGGAEVLIGKFDTNLVFSDPLPPLAVSNNGLDLNGQQHVDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           AL QLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYW YITNCGTEGN
Sbjct: 121 ALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWXYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYAS E+HYSVFKAARMYRMDCVKV TLISGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASXETHYSVFKAARMYRMDCVKVGTLISGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFSKDRFYIHCDGALFG
Sbjct: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSKDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATI GSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIXGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDVGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 486

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMPSVSQEKLDDFL++LVEKRSTWY  ENVQPPCVAAELG+ESCACKLHRS
Sbjct: 541 VVVMPSVSQEKLDDFLSDLVEKRSTWYDGENVQPPCVAAELGNESCACKLHRS 486

[Close]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match: Q9MA74 (Serine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=SDC PE=1 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 2.1e-215
Identity = 376/577 (65.16%), Postives = 419/577 (72.62%), Query Frame = 0 

Query: 16  EVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREIVLGRNVHTTCLSITE 75
           ++++ +FD   V +EPLPP      G D  G         G+RE+VLGRN+HTT L++TE
Sbjct: 21  DILSDDFDPTAVVTEPLPPPVTNGIGADKGG-------GGGEREMVLGRNIHTTSLAVTE 80

Query: 76  PDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQLQHFSINNLGD 135
           P+ NDE TGDKEAYMASVLARYRK L+ERTK HLGYPYNLDFDYGALGQLQHFSINNLGD
Sbjct: 81  PEVNDEFTGDKEAYMASVLARYRKTLVERTKNHLGYPYNLDFDYGALGQLQHFSINNLGD 140

Query: 136 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSETLGID 195
           PFIESNYGVHSR FEVGVLDWFARLWEIE+++YWGYITNCGTEGNLHGILVG        
Sbjct: 141 PFIESNYGVHSRPFEVGVLDWFARLWEIERDDYWGYITNCGTEGNLHGILVG-------- 200

Query: 196 SCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLANKDKP 255
              RE+ PDGILYASRESHYSVFKAARMYRM+C KVDTL+SGEIDC DLR KLLANKDKP
Sbjct: 201 ---REMFPDGILYASRESHYSVFKAARMYRMECEKVDTLMSGEIDCDDLRKKLLANKDKP 260

Query: 256 AILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMSVIGGL 315
           AILNVNIGTTVKGAVDDLDLVI+TL +CGFS DRFYIHCDGALFGLMMPFVKR       
Sbjct: 261 AILNVNIGTTVKGAVDDLDLVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKR------- 320

Query: 316 IGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPCTQGLE 375
                                                                       
Sbjct: 321 ------------------------------------------------------------ 380

Query: 376 VLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMPCGIQL 435
                                        APKV+F KPIGSVSVSGHKFVGCPMPCG+Q+
Sbjct: 381 -----------------------------APKVTFNKPIGSVSVSGHKFVGCPMPCGVQI 440

Query: 436 TRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHY 495
           TR+EHI  LSSNVEYLASRDATIMGSRNGHAP+FLWYTLNRKGYKGFQKEVQKCLRNAHY
Sbjct: 441 TRMEHIKVLSSNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYKGFQKEVQKCLRNAHY 482

Query: 496 LKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQEKLDDF 555
           LKDRL + GISAMLNELSSTVVFERP+DEEF+RRWQLAC+G+IAHVVVMPSV+ EKLD+F
Sbjct: 501 LKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHVVVMPSVTIEKLDNF 482

Query: 556 LAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           L +LV+ R  WY+D + QPPC+A+E+G+ +C C  H+
Sbjct: 561 LKDLVKHRLIWYEDGS-QPPCLASEVGTNNCICPAHK 482

[Close]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match: Q6ESZ9 (Serine decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SDC1 PE=3 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 7.7e-210
Identity = 377/593 (63.58%), Postives = 421/593 (70.99%), Query Frame = 0 

Query: 1   MVGSV-MGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKRE 60
           MVGSV  G+ +  G A  +NG              +A+         ++ G+ +   +RE
Sbjct: 1   MVGSVGNGLVDLGGAAVAVNG---VGKGMRPEAVAVAMEVESPPRPAEEEGEGSPT-RRE 60

Query: 61  IVLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDY 120
           IVLGRNVHT   ++ EPDA+DE TG++EA MASVLA YR+NL+ERTK+HLGYPYNLDFDY
Sbjct: 61  IVLGRNVHTASFAVKEPDADDEETGEREAAMASVLALYRRNLVERTKHHLGYPYNLDFDY 120

Query: 121 GALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEG 180
           GALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFAR+WE+EKNEYWGYITNCGTEG
Sbjct: 121 GALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARIWELEKNEYWGYITNCGTEG 180

Query: 181 NLHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEI 240
           NLHGILVG           REV PDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEI
Sbjct: 181 NLHGILVG-----------REVFPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEI 240

Query: 241 DCADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALF 300
           DC D + KLL N+DKPAI+NVNIGTTVKGAVDDLDLVI+TL + GF KDRFYIHCDGALF
Sbjct: 241 DCEDFQRKLLLNRDKPAIINVNIGTTVKGAVDDLDLVIKTLEEGGF-KDRFYIHCDGALF 300

Query: 301 GLMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYC 360
           GLM+PFVK+                                                   
Sbjct: 301 GLMIPFVKK--------------------------------------------------- 360

Query: 361 LGGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSV 420
                                                        APKVSFKKPIGSVSV
Sbjct: 361 ---------------------------------------------APKVSFKKPIGSVSV 420

Query: 421 SGHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 480
           SGHKFVGCPMPCG+Q+TRLEHIN LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY
Sbjct: 421 SGHKFVGCPMPCGVQITRLEHINRLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 480

Query: 481 KGFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIA 540
           +GFQKEVQKCLRNAHYLKDRL + GI AMLNELSSTVVFERP+DEEF+RRWQLACEGNIA
Sbjct: 481 RGFQKEVQKCLRNAHYLKDRLKEAGIGAMLNELSSTVVFERPKDEEFVRRWQLACEGNIA 481

Query: 541 HVVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           HVVVMPSV+ +KLD FL EL EKR+TWY+D + QPPC+A ++G E+C C +H+
Sbjct: 541 HVVVMPSVTIDKLDYFLNELTEKRATWYQDGSCQPPCLAKDVGEENCLCSIHK 481

[Close]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match: Q8RV06 (Serine decarboxylase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0105700 PE=2 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 5.2e-142
Identity = 249/521 (47.79%), Postives = 324/521 (62.19%), Query Frame = 0 

Query: 71  LSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQLQHFSI 130
           L I EP A++    +K+A ++ ++A Y ++L  R+ YHLGYP N D+D+  L    +FS+
Sbjct: 46  LEIEEPPADEMEAAEKKAGISRLMAGYVQHLQHRSAYHLGYPLNFDYDFSPLAPFLNFSL 105

Query: 131 NNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSE 190
           NN GDPF + N  VHSRQFEV VL+WFA  W+++++++WGYIT+ GTEGNL+G+LVG   
Sbjct: 106 NNAGDPFAKVNNSVHSRQFEVAVLNWFANFWDVQRDQFWGYITSGGTEGNLYGLLVG--- 165

Query: 191 TLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLA 250
                   RE+ PDGILYAS +SHYSVFKAA+MYR+ C+++ T +SGE++ ADL+ KL  
Sbjct: 166 --------RELFPDGILYASNDSHYSVFKAAKMYRVKCIRIATTVSGEMNYADLKSKLQH 225

Query: 251 NKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMS 310
           N + PAI+N NIGTT KGAVDD+D +I TL  CGF ++R+YIHCD AL G+M PF+K+  
Sbjct: 226 NTNSPAIINANIGTTFKGAVDDIDQIISTLEKCGF-QNRYYIHCDSALSGMMTPFMKQ-- 285

Query: 311 VIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPC 370
                                                                       
Sbjct: 286 ------------------------------------------------------------ 345

Query: 371 TQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMP 430
                                             APKVSFKKPIGS+SVSGHKF+GCPMP
Sbjct: 346 ----------------------------------APKVSFKKPIGSISVSGHKFLGCPMP 405

Query: 431 CGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 490
           CG+ +TRLEH   LS+++EY+ASRD+TI GSRNGHAPIFLWYTL++KGYKG  KEV  C+
Sbjct: 406 CGVVITRLEHAEVLSTDIEYIASRDSTITGSRNGHAPIFLWYTLSKKGYKGLLKEVHICM 458

Query: 491 RNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQE 550
            NA YL+  L   GISA  N LS+ VVFERP+DE  + RWQLACEGN+AH+VVMP+V+ E
Sbjct: 466 GNARYLEVLLKQVGISASCNTLSNIVVFERPKDERIVCRWQLACEGNLAHIVVMPNVTFE 458

Query: 551 KLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLH 592
           KL  F+ EL EKR  WY+D+    PC+A ++G E+C C LH
Sbjct: 526 KLTVFVEELAEKRKDWYQDKGFDIPCLAVDIGKENCYCNLH 458

[Close]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match: Q7X8D4 (Serine decarboxylase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os04g04640 PE=3 SV=2)

HSP 1 Score: 468.8 bits (1205), Expect = 9.3e-131
Identity = 233/495 (47.07%), Postives = 302/495 (61.01%), Query Frame = 0 

Query: 98  RKNLLERTKYHLGYPYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWF 157
           R N   RT+ + GYP N +FD+G + +  +  +NN GDPF+E NYG+HS++FE+ VLDWF
Sbjct: 57  RINEESRTRRNAGYPINFEFDFGPVIEFLNMRLNNAGDPFMECNYGIHSKKFEIAVLDWF 116

Query: 158 ARLWEIEKNEYWGYITNCGTEGNLHGILVGSSETLGIDSCRREVLPDGILYASRESHYSV 217
           ARLWE+ K++YWGY+T+ GTEGN+HG+LVG           RE+ P+GI+Y S +SHYS+
Sbjct: 117 ARLWELPKDQYWGYVTSGGTEGNMHGLLVG-----------RELFPEGIIYTSCDSHYSI 176

Query: 218 FKAARMYRMDCVKVDTLISGEIDCADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVI 277
           FKAA+MYR+ C+K+DTL SGE+D AD R KLL N   PAI+NVNIGTT+KGAVDDLD V+
Sbjct: 177 FKAAKMYRVQCIKIDTLFSGEMDYADFRRKLLQNTRSPAIVNVNIGTTMKGAVDDLDEVV 236

Query: 278 QTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRN 337
             L +CGF+ +RFYIHCD AL GLMMPF+K+                             
Sbjct: 237 MILENCGFA-NRFYIHCDSALVGLMMPFIKQ----------------------------- 296

Query: 338 LMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQF 397
                                                                       
Sbjct: 297 ------------------------------------------------------------ 356

Query: 398 VTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMPCGIQLTRLEHIN-ALSSNVEYLASRDA 457
                  APK++FKKPIGS+ +SGHKF+GCP+PCG+ +TRL  IN  +S+N+EY++S D 
Sbjct: 357 -------APKLTFKKPIGSICISGHKFIGCPIPCGVLITRLMDINHVMSTNIEYISSNDT 416

Query: 458 TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTV 517
           TI GSRNGHAPIFLWY L R GY G  K V+ CL+NA YL  RL + G+S  LN LS TV
Sbjct: 417 TIAGSRNGHAPIFLWYALKRIGYNGLCKTVENCLKNAQYLALRLREMGVSVFLNALSITV 438

Query: 518 VFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPC 577
           VFERP DE F+R+WQLAC+G IAHVVVMP+VS E+++ FL E  + R   ++D+     C
Sbjct: 477 VFERPNDETFVRKWQLACQGKIAHVVVMPNVSLERINMFLEEFTKSRIALHQDK-----C 438

Query: 578 VAAELGSESCACKLH 592
           VA ++  E+C C LH
Sbjct: 537 VAGDVSQENCLCSLH 438

[Close]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match: P54772 (Histidine decarboxylase OS=Solanum lycopersicum OX=4081 GN=HDC PE=2 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.3e-127
Identity = 232/504 (46.03%), Postives = 306/504 (60.71%), Query Frame = 0 

Query: 93  VLARYRKNLLERTKYHLGYPYNLDFDYGA-LGQLQHFSINNLGDPFIESNYGVHSRQFEV 152
           +L +Y + L ER KYH+GYP N+ +++ A L  L  F +NN GDPF +     HS+ FEV
Sbjct: 17  ILTQYLETLSERKKYHIGYPINMCYEHHATLAPLLQFHLNNCGDPFTQHPTDFHSKDFEV 76

Query: 153 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSETLGIDSCRREVLPDGILYASR 212
            VLDWFA+LWEIEK+EYWGYIT+ GTEGNLHG  +G          RRE+LP+G LYAS+
Sbjct: 77  AVLDWFAQLWEIEKDEYWGYITSGGTEGNLHGFWLG----------RRELLPNGYLYASK 136

Query: 213 ESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLANKDKPAILNVNIGTTVKGAVD 272
           +SHYS+FKAARMYRM+   ++TL++GEID  DL+ KLL NK+KPAI+N+NIGTT KGA+D
Sbjct: 137 DSHYSIFKAARMYRMELQTINTLVNGEIDYEDLQSKLLVNKNKPAIININIGTTFKGAID 196

Query: 273 DLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMSVIGGLIGGSDSMDLATTKRGH 332
           DLD VIQTL +CG+S D +YIHCD AL GL++PF+K                        
Sbjct: 197 DLDFVIQTLENCGYSNDNYYIHCDRALCGLILPFIKH----------------------- 256

Query: 333 ISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPCTQGLEVLIKWIWQQPKEATLE 392
                                                                       
Sbjct: 257 ------------------------------------------------------------ 316

Query: 393 VFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMPCGIQLTRLEHINALSSNVEYL 452
                        A K++FKKPIGS+S+SGHKF+GCPM CG+Q+TR  +++ L S +EY+
Sbjct: 317 -------------AKKITFKKPIGSISISGHKFLGCPMSCGVQITRRSYVSTL-SKIEYI 376

Query: 453 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDEGISAMLNE 512
            S DATI GSRNG  PIFLWY L++KG+   Q++   C+ NA YLKDRLL+ GIS MLN+
Sbjct: 377 NSADATISGSRNGFTPIFLWYCLSKKGHARLQQDSITCIENARYLKDRLLEAGISVMLND 412

Query: 513 LSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQEKLDDFLAELVEKRS-TWYKDE 572
            S TVVFERP D +FIRRW L C   +AHVV+MP +++E +D F  +L+++R+  WY+D 
Sbjct: 437 FSITVVFERPCDHKFIRRWNLCCLRGMAHVVIMPGITRETIDSFFKDLMQERNYKWYQDV 412

Query: 573 NVQPPCVAAELGSESCAC---KLH 592
              PPC+A +L + +C C   K+H
Sbjct: 497 KALPPCLADDL-ALNCMCSNKKMH 412

[Close]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match: A0A1S3B4B2 (serine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103485627 PE=3 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 1.1e-264
Identity = 467/593 (78.75%), Postives = 478/593 (80.61%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGSVMGMGENNGGAEV+ G FDTN+VFS+PLPPLAV+NNG+DLNGQQH DSNQKGKREI
Sbjct: 1   MVGSVMGMGENNGGAEVLIGKFDTNLVFSDPLPPLAVSNNGLDLNGQQHVDSNQKGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHT+CLSITEPDANDESTGDKEAYMASVLARYRK+LLERTKYHLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTSCLSITEPDANDESTGDKEAYMASVLARYRKSLLERTKYHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           AL QLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN
Sbjct: 121 ALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVL DGILYASRESHYSVFKAARMYRMDCVKV TLISGEID
Sbjct: 181 LHGILVG-----------REVLSDGILYASRESHYSVFKAARMYRMDCVKVGTLISGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFSKDRFYIHCDGALFG
Sbjct: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSKDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKFVGCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK
Sbjct: 421 GHKFVGCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEG+IAH
Sbjct: 481 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPRDEEFIRRWQLACEGSIAH 486

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMPSVSQEKLDDFLAELVEKRSTWY DENVQPPCVAAELG+ESCACKLHRS
Sbjct: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYDDENVQPPCVAAELGNESCACKLHRS 486

[Close]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match: A0A0A0K8S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057160 PE=3 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 1.1e-262
Identity = 462/588 (78.57%), Postives = 473/588 (80.44%), Query Frame = 0 

Query: 6   MGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREIVLGRN 65
           MGMGENNGGAEV+ G FDTN+VFS+PLPPLAV+NNG+DLNGQQH DSNQKGKREIVLGRN
Sbjct: 1   MGMGENNGGAEVLIGKFDTNLVFSDPLPPLAVSNNGLDLNGQQHVDSNQKGKREIVLGRN 60

Query: 66  VHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQL 125
           VHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGAL QL
Sbjct: 61  VHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALSQL 120

Query: 126 QHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGIL 185
           QHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGIL
Sbjct: 121 QHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGIL 180

Query: 186 VGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLR 245
           VG           REVLPDGILYASRE+HYSVFKAARMYRMDCVKV TLISGEIDCADLR
Sbjct: 181 VG-----------REVLPDGILYASRETHYSVFKAARMYRMDCVKVGTLISGEIDCADLR 240

Query: 246 VKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPF 305
           VKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFSKDRFYIHCDGALFGLMMPF
Sbjct: 241 VKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSKDRFYIHCDGALFGLMMPF 300

Query: 306 VKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPI 365
           VKR                                                         
Sbjct: 301 VKR--------------------------------------------------------- 360

Query: 366 ILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFV 425
                                                  APKVSFKKPIGSVSVSGHKFV
Sbjct: 361 ---------------------------------------APKVSFKKPIGSVSVSGHKFV 420

Query: 426 GCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 485
           GCPMPCG+QLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE
Sbjct: 421 GCPMPCGVQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 480

Query: 486 VQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMP 545
           VQKCLRNAHYLKDRLLD GISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMP
Sbjct: 481 VQKCLRNAHYLKDRLLDVGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMP 481

Query: 546 SVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           SVSQEKLDDFL++LVEKRSTWY  ENVQPPCVAAELG+ESCACKLHRS
Sbjct: 541 SVSQEKLDDFLSDLVEKRSTWYDGENVQPPCVAAELGNESCACKLHRS 481

[Close]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match: A0A6J1JSZ9 (serine decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111487232 PE=3 SV=1)

HSP 1 Score: 840.1 bits (2169), Expect = 5.7e-240
Identity = 423/593 (71.33%), Postives = 450/593 (75.89%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGS MGM E NG AE++ G+ D N VF E L      +NGVD +G+ H +  Q GKREI
Sbjct: 1   MVGSAMGMSEKNGAAEILIGDLDPNGVFLESL------SNGVDFDGEHHAELKQNGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTC +ITEPDANDESTGDK+AYMASVLARYRKNL+ERTK+HLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCFTITEPDANDESTGDKDAYMASVLARYRKNLVERTKHHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKN+YWGYITNCGTEGN
Sbjct: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNDYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYAS+ESHYSVFKAARMYRMDCVKV TL SGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASQESHYSVFKAARMYRMDCVKVGTLTSGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADL++KLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLN+CGFS DRFYIHCDGALFG
Sbjct: 241 CADLKLKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNECGFSNDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKF+GCPMPCG+QLTRL+HINALS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 
Sbjct: 421 GHKFIGCPMPCGVQLTRLDHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYT 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLK RLLD GISAMLNELSSTVVFERPRDEEF+RRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKGRLLDAGISAMLNELSSTVVFERPRDEEFVRRWQLACEGNIAH 480

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMP+V QEKLDDF+AEL EKRSTWY ++  QPPC+AAELG E+CACKLHR+
Sbjct: 541 VVVMPNVIQEKLDDFIAELTEKRSTWYAEDKDQPPCLAAELGKENCACKLHRT 480

[Close]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match: A0A6J1GWI4 (serine decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111458212 PE=3 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.8e-238
Identity = 423/593 (71.33%), Postives = 449/593 (75.72%), Query Frame = 0 

Query: 1   MVGSVMGMGENNGGAEVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREI 60
           MVGS MGM E NG AE++  + D N VF E L      +NGVDL+G+   +  Q GKREI
Sbjct: 1   MVGSAMGMSEKNGEAEILIVDLDPNGVFLESL------SNGVDLDGEHDAELKQNGKREI 60

Query: 61  VLGRNVHTTCLSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYG 120
           VLGRNVHTTC +ITEPDANDESTGDK+AYMASVLARYRKNL+ERTK+HLGYPYNLDFDYG
Sbjct: 61  VLGRNVHTTCFTITEPDANDESTGDKDAYMASVLARYRKNLVERTKHHLGYPYNLDFDYG 120

Query: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGN 180
           ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKN+YWGYITNCGTEGN
Sbjct: 121 ALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNDYWGYITNCGTEGN 180

Query: 181 LHGILVGSSETLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEID 240
           LHGILVG           REVLPDGILYAS+ESHYSVFKAARMYRMDCVKV TLISGEID
Sbjct: 181 LHGILVG-----------REVLPDGILYASQESHYSVFKAARMYRMDCVKVGTLISGEID 240

Query: 241 CADLRVKLLANKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFG 300
           CADL++KLLANKDKPAILNVNIGTTVKGAVDDLDLVI TLN+CGFS DRFYIHCDGALFG
Sbjct: 241 CADLKLKLLANKDKPAILNVNIGTTVKGAVDDLDLVISTLNECGFSNDRFYIHCDGALFG 300

Query: 301 LMMPFVKRMSVIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCL 360
           LMMPFVKR                                                    
Sbjct: 301 LMMPFVKR---------------------------------------------------- 360

Query: 361 GGSPIILRPCTQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVS 420
                                                       APKVSFKKPIGSVSVS
Sbjct: 361 --------------------------------------------APKVSFKKPIGSVSVS 420

Query: 421 GHKFVGCPMPCGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 480
           GHKF+GCPMPCG+QLTRLEHINALS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 
Sbjct: 421 GHKFIGCPMPCGVQLTRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYT 480

Query: 481 GFQKEVQKCLRNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAH 540
           GFQKEVQKCLRNAHYLK RLLD GISAMLNELSSTVVFERPRDEEF+RRWQLACEGNIAH
Sbjct: 481 GFQKEVQKCLRNAHYLKGRLLDAGISAMLNELSSTVVFERPRDEEFVRRWQLACEGNIAH 480

Query: 541 VVVMPSVSQEKLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHRS 594
           VVVMP+V QEKLDDF+AEL EKRSTWY ++  QPPC+AAELG E+CACKLHR+
Sbjct: 541 VVVMPNVIQEKLDDFIAELTEKRSTWYAEDKDQPPCLAAELGKENCACKLHRT 480

[Close]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match: A0A4V6A8A2 (Serine decarboxylase family protein OS=Populus alba OX=43335 GN=D5086_0000181760 PE=3 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 6.1e-226
Identity = 405/582 (69.59%), Postives = 431/582 (74.05%), Query Frame = 0 

Query: 12  NGGAEVMNGNFDTN-VVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREIVLGRNVHTTC 71
           NG AEV   +FD + VV  EPLPP+A   NG   NG           REIVLG+NVHTTC
Sbjct: 12  NGKAEV--EDFDISAVVQPEPLPPIAAAENGDKRNG-----------REIVLGKNVHTTC 71

Query: 72  LSITEPDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQLQHFSI 131
           L +TEP+ANDE TGDKEAYMASVLARYRKNL+ERTKYHLGYPYNLDFDYGALGQLQHFSI
Sbjct: 72  LEVTEPEANDEFTGDKEAYMASVLARYRKNLMERTKYHLGYPYNLDFDYGALGQLQHFSI 131

Query: 132 NNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSE 191
           NNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVG   
Sbjct: 132 NNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVG--- 191

Query: 192 TLGIDSCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLA 251
                   REV PDG+LYASRESHYSVFKAARMYRMDC KVD LISGEIDCAD + KLLA
Sbjct: 192 --------REVFPDGVLYASRESHYSVFKAARMYRMDCEKVDCLISGEIDCADFKAKLLA 251

Query: 252 NKDKPAILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMS 311
           NKDKPAI+NVNIGTTVKGAVDDLDLVIQTL + GFS+DRFYIHCDGALFGLMMPFVKR  
Sbjct: 252 NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFSQDRFYIHCDGALFGLMMPFVKR-- 311

Query: 312 VIGGLIGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPC 371
                                                                       
Sbjct: 312 ------------------------------------------------------------ 371

Query: 372 TQGLEVLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMP 431
                                             APKV+FKKPIGSVSVSGHKFVGCPMP
Sbjct: 372 ----------------------------------APKVTFKKPIGSVSVSGHKFVGCPMP 431

Query: 432 CGIQLTRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 491
           CG+Q+TR+EHI+ LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL
Sbjct: 432 CGVQITRMEHIDVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 473

Query: 492 RNAHYLKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQE 551
           RNAHYLKDRL D GISAMLNELSSTVVFERP DEEF+RRWQLAC+GNIAHVVVMPSV+ E
Sbjct: 492 RNAHYLKDRLHDAGISAMLNELSSTVVFERPLDEEFVRRWQLACQGNIAHVVVMPSVTIE 473

Query: 552 KLDDFLAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           KLDDFL ELVEKRSTWY+D  VQPPC+AA++G E+CAC LH+
Sbjct: 552 KLDDFLNELVEKRSTWYRDGGVQPPCIAADVGCENCACALHK 473

[Close]
BLAST of HG10004025 vs. TAIR 10
Match: AT1G43710.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein )

HSP 1 Score: 750.0 bits (1935), Expect = 1.5e-216
Identity = 376/577 (65.16%), Postives = 419/577 (72.62%), Query Frame = 0 

Query: 16  EVMNGNFDTNVVFSEPLPPLAVTNNGVDLNGQQHGDSNQKGKREIVLGRNVHTTCLSITE 75
           ++++ +FD   V +EPLPP      G D  G         G+RE+VLGRN+HTT L++TE
Sbjct: 21  DILSDDFDPTAVVTEPLPPPVTNGIGADKGG-------GGGEREMVLGRNIHTTSLAVTE 80

Query: 76  PDANDESTGDKEAYMASVLARYRKNLLERTKYHLGYPYNLDFDYGALGQLQHFSINNLGD 135
           P+ NDE TGDKEAYMASVLARYRK L+ERTK HLGYPYNLDFDYGALGQLQHFSINNLGD
Sbjct: 81  PEVNDEFTGDKEAYMASVLARYRKTLVERTKNHLGYPYNLDFDYGALGQLQHFSINNLGD 140

Query: 136 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGSSETLGID 195
           PFIESNYGVHSR FEVGVLDWFARLWEIE+++YWGYITNCGTEGNLHGILVG        
Sbjct: 141 PFIESNYGVHSRPFEVGVLDWFARLWEIERDDYWGYITNCGTEGNLHGILVG-------- 200

Query: 196 SCRREVLPDGILYASRESHYSVFKAARMYRMDCVKVDTLISGEIDCADLRVKLLANKDKP 255
              RE+ PDGILYASRESHYSVFKAARMYRM+C KVDTL+SGEIDC DLR KLLANKDKP
Sbjct: 201 ---REMFPDGILYASRESHYSVFKAARMYRMECEKVDTLMSGEIDCDDLRKKLLANKDKP 260

Query: 256 AILNVNIGTTVKGAVDDLDLVIQTLNDCGFSKDRFYIHCDGALFGLMMPFVKRMSVIGGL 315
           AILNVNIGTTVKGAVDDLDLVI+TL +CGFS DRFYIHCDGALFGLMMPFVKR       
Sbjct: 261 AILNVNIGTTVKGAVDDLDLVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKR------- 320

Query: 316 IGGSDSMDLATTKRGHISVDRNLMPPIVSGTDSSVRAAPNTNYCLGGSPIILRPCTQGLE 375
                                                                       
Sbjct: 321 ------------------------------------------------------------ 380

Query: 376 VLIKWIWQQPKEATLEVFDYQFVTFPTSTAPKVSFKKPIGSVSVSGHKFVGCPMPCGIQL 435
                                        APKV+F KPIGSVSVSGHKFVGCPMPCG+Q+
Sbjct: 381 -----------------------------APKVTFNKPIGSVSVSGHKFVGCPMPCGVQI 440

Query: 436 TRLEHINALSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHY 495
           TR+EHI  LSSNVEYLASRDATIMGSRNGHAP+FLWYTLNRKGYKGFQKEVQKCLRNAHY
Sbjct: 441 TRMEHIKVLSSNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYKGFQKEVQKCLRNAHY 482

Query: 496 LKDRLLDEGISAMLNELSSTVVFERPRDEEFIRRWQLACEGNIAHVVVMPSVSQEKLDDF 555
           LKDRL + GISAMLNELSSTVVFERP+DEEF+RRWQLAC+G+IAHVVVMPSV+ EKLD+F
Sbjct: 501 LKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHVVVMPSVTIEKLDNF 482

Query: 556 LAELVEKRSTWYKDENVQPPCVAAELGSESCACKLHR 593
           L +LV+ R  WY+D + QPPC+A+E+G+ +C C  H+
Sbjct: 561 LKDLVKHRLIWYEDGS-QPPCLASEVGTNNCICPAHK 482

The following BLAST results are available for this feature:
BLAST of HG10004025 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886253.12.1e-26579.05serine decarboxylase isoform X1 [Benincasa hispida] >XP_038886254.1 serine decar... [more]
XP_038886255.14.7e-26579.05serine decarboxylase isoform X2 [Benincasa hispida][more]
XP_011656639.16.2e-26578.75serine decarboxylase isoform X1 [Cucumis sativus] >XP_031742680.1 serine decarbo... [more]
XP_008441525.12.3e-26478.75PREDICTED: serine decarboxylase [Cucumis melo][more]
XP_031743415.19.8e-26378.25LOW QUALITY PROTEIN: serine decarboxylase-like [Cucumis sativus][more]
BLAST of HG10004025 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MA742.1e-21565.16Serine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=SDC PE=1 SV=1[more]
Q6ESZ97.7e-21063.58Serine decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SDC1 PE=3 SV=... [more]
Q8RV065.2e-14247.79Serine decarboxylase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0105700 ... [more]
Q7X8D49.3e-13147.07Serine decarboxylase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os04g0464... [more]
P547721.3e-12746.03Histidine decarboxylase OS=Solanum lycopersicum OX=4081 GN=HDC PE=2 SV=1[more]
BLAST of HG10004025 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B4B21.1e-26478.75serine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103485627 PE=3 SV=1[more]
A0A0A0K8S31.1e-26278.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057160 PE=3 SV=1[more]
A0A6J1JSZ95.7e-24071.33serine decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111487232 PE=3 SV=1[more]
A0A6J1GWI41.8e-23871.33serine decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111458212 PE=3 SV=1[more]
A0A4V6A8A26.1e-22669.59Serine decarboxylase family protein OS=Populus alba OX=43335 GN=D5086_0000181760... [more]
BLAST of HG10004025 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G43710.11.5e-21665.16Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase, small domainGENE3D3.90.1150.10Aspartate Aminotransferase, domain 1coord: 475..563
e-value: 2.1E-9
score: 39.1
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 126..474
e-value: 4.2E-45
score: 155.9
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 148..308
e-value: 7.6E-10
score: 38.0
coord: 415..515
e-value: 3.9E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR46101FAMILY NOT NAMEDcoord: 403..592
coord: 1..310
NoneNo IPR availablePANTHERPTHR46101:SF4SERINE DECARBOXYLASEcoord: 403..592
coord: 1..310
IPR021115Pyridoxal-phosphate binding sitePROSITEPS00392DDC_GAD_HDC_YDCcoord: 416..437
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 405..562
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 96..328

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004025.1HG10004025.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016830 carbon-carbon lyase activity
molecular_function GO:0003824 catalytic activity