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HG10003902 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTCCGTTGCGAATTTTTTCTCAATTTTCTTCATCGTCATTCACGCCTTCTCACTCTCCTCATCCTCTCCGGTCGGCGGTGATCACGGCGGCTCTTCTCTAATAGGCGCCGGCTGTGGCTTACAACCGCTGCGGATTTCTAATTCTCTCAAGAATCAGAGTATTGGACCGTTGATGTCTCGATTGGAATCTCAGAATTGCGAGGTTTGGACGGAGGCCTGCTCTGAGGCGATCCTGAGTTTGGCGAAGCGGCCTGAGGTTGTTGATTGGTTGAAGAAGGTGAGGAGAAGAATCCATGAGAATCCGGAGCTTGCGTTCGAAGAATTCGAAACTAGTCAGTTAGTTCGCGATGAGTTGGATCGGATGGATATTAGCTACGAGCATCCGTTGGCTAAAACTGGCGTTCGTGCTAGGATCGGAACTGGCGGACCGCCTTTTGTTGCTCTTAGAGCCGATATGGATGCTCTTCCAATCCAGGTTCTTCTGCAAAATCTGATATCGCGTTTATGCTTTTGA ATGATCTCCGTTGCGAATTTTTTCTCAATTTTCTTCATCGTCATTCACGCCTTCTCACTCTCCTCATCCTCTCCGGTCGGCGGTGATCACGGCGGCTCTTCTCTAATAGGCGCCGGCTGTGGCTTACAACCGCTGCGGATTTCTAATTCTCTCAAGAATCAGAGTATTGGACCGTTGATGTCTCGATTGGAATCTCAGAATTGCGAGGTTTGGACGGAGGCCTGCTCTGAGGCGATCCTGAGTTTGGCGAAGCGGCCTGAGGTTGTTGATTGGTTGAAGAAGGTGAGGAGAAGAATCCATGAGAATCCGGAGCTTGCGTTCGAAGAATTCGAAACTAGTCAGTTAGTTCGCGATGAGTTGGATCGGATGGATATTAGCTACGAGCATCCGTTGGCTAAAACTGGCGTTCGTGCTAGGATCGGAACTGGCGGACCGCCTTTTGTTGCTCTTAGAGCCGATATGGATGCTCTTCCAATCCAGGTTCTTCTGCAAAATCTGATATCGCGTTTATGCTTTTGA ATGATCTCCGTTGCGAATTTTTTCTCAATTTTCTTCATCGTCATTCACGCCTTCTCACTCTCCTCATCCTCTCCGGTCGGCGGTGATCACGGCGGCTCTTCTCTAATAGGCGCCGGCTGTGGCTTACAACCGCTGCGGATTTCTAATTCTCTCAAGAATCAGAGTATTGGACCGTTGATGTCTCGATTGGAATCTCAGAATTGCGAGGTTTGGACGGAGGCCTGCTCTGAGGCGATCCTGAGTTTGGCGAAGCGGCCTGAGGTTGTTGATTGGTTGAAGAAGGTGAGGAGAAGAATCCATGAGAATCCGGAGCTTGCGTTCGAAGAATTCGAAACTAGTCAGTTAGTTCGCGATGAGTTGGATCGGATGGATATTAGCTACGAGCATCCGTTGGCTAAAACTGGCGTTCGTGCTAGGATCGGAACTGGCGGACCGCCTTTTGTTGCTCTTAGAGCCGATATGGATGCTCTTCCAATCCAGGTTCTTCTGCAAAATCTGATATCGCGTTTATGCTTTTGA MISVANFFSIFFIVIHAFSLSSSSPVGGDHGGSSLIGAGCGLQPLRISNSLKNQSIGPLMSRLESQNCEVWTEACSEAILSLAKRPEVVDWLKKVRRRIHENPELAFEEFETSQLVRDELDRMDISYEHPLAKTGVRARIGTGGPPFVALRADMDALPIQVLLQNLISRLCF Homology
BLAST of HG10003902 vs. NCBI nr
Match: XP_038885213.1 (IAA-amino acid hydrolase ILR1-like 6 [Benincasa hispida]) HSP 1 Score: 284.3 bits (726), Expect = 7.2e-73 Identity = 146/160 (91.25%), Postives = 150/160 (93.75%), Query Frame = 0
BLAST of HG10003902 vs. NCBI nr
Match: KAE8647271.1 (hypothetical protein Csa_018242 [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 8.8e-71 Identity = 141/160 (88.12%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of HG10003902 vs. NCBI nr
Match: XP_004149796.1 (IAA-amino acid hydrolase ILR1-like 6 [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 8.8e-71 Identity = 141/160 (88.12%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of HG10003902 vs. NCBI nr
Match: XP_008466723.1 (PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Cucumis melo] >KAA0051631.1 IAA-amino acid hydrolase ILR1-like 6 [Cucumis melo var. makuwa] >TYK27625.1 IAA-amino acid hydrolase ILR1-like 6 [Cucumis melo var. makuwa]) HSP 1 Score: 272.3 bits (695), Expect = 2.8e-69 Identity = 139/160 (86.88%), Postives = 145/160 (90.62%), Query Frame = 0
BLAST of HG10003902 vs. NCBI nr
Match: KAG7016484.1 (IAA-amino acid hydrolase ILR1-like 6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66 Identity = 137/164 (83.54%), Postives = 145/164 (88.41%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy Swiss-Prot
Match: Q8VYX0 (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana OX=3702 GN=ILL6 PE=1 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 5.0e-37 Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy Swiss-Prot
Match: Q5Z678 (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILL6 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy Swiss-Prot
Match: P54970 (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana OX=3702 GN=ILL2 PE=1 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 5.8e-25 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy Swiss-Prot
Match: Q9SWX9 (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana OX=3702 GN=ILL5 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24 Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy Swiss-Prot
Match: Q84XG9 (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica OX=39946 GN=ILL1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.9e-24 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy TrEMBL
Match: A0A0A0KDD2 (M20_dimer domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G384060 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 4.2e-71 Identity = 141/160 (88.12%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy TrEMBL
Match: A0A5A7UDM9 (IAA-amino acid hydrolase ILR1-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3445G00090 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69 Identity = 139/160 (86.88%), Postives = 145/160 (90.62%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy TrEMBL
Match: A0A1S3CT70 (IAA-amino acid hydrolase ILR1-like 6 OS=Cucumis melo OX=3656 GN=LOC103504067 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69 Identity = 139/160 (86.88%), Postives = 145/160 (90.62%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy TrEMBL
Match: A0A6J1JWG3 (IAA-amino acid hydrolase ILR1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111489479 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.1e-66 Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0
BLAST of HG10003902 vs. ExPASy TrEMBL
Match: A0A6J1FFS9 (IAA-amino acid hydrolase ILR1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111445084 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65 Identity = 135/164 (82.32%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of HG10003902 vs. TAIR 10
Match: AT1G44350.1 (IAA-leucine resistant (ILR)-like gene 6 ) HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38 Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of HG10003902 vs. TAIR 10
Match: AT5G56660.1 (IAA-leucine resistant (ILR)-like 2 ) HSP 1 Score: 115.5 bits (288), Expect = 4.1e-26 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of HG10003902 vs. TAIR 10
Match: AT1G51780.1 (IAA-leucine resistant (ILR)-like gene 5 ) HSP 1 Score: 114.4 bits (285), Expect = 9.2e-26 Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of HG10003902 vs. TAIR 10
Match: AT5G56650.1 (IAA-leucine resistant (ILR)-like 1 ) HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of HG10003902 vs. TAIR 10
Match: AT3G02875.1 (Peptidase M20/M25/M40 family protein ) HSP 1 Score: 108.6 bits (270), Expect = 5.0e-24 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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