HG10003818 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003818
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
LocationChr08: 9735511 .. 9736308 (+)
RNA-Seq ExpressionHG10003818
SyntenyHG10003818
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGTTCCCGGAAACCGTCTCGTACTGCCACAGAATGTTCCGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGTTAGAGTGTCCAATATGTTGGGAATCCTTCAACATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACTTTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTATTTCCTTTTGTGGATGGTTGAGAACATTAACGTCGAAAGAGTTAAATCTCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGTGGTACTTCATCCAGGGGTAATCAAGTCGGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGACTTCTATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCATCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

mRNA sequence

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGTTCCCGGAAACCGTCTCGTACTGCCACAGAATGTTCCGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGTTAGAGTGTCCAATATGTTGGGAATCCTTCAACATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACTTTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTATTTCCTTTTGTGGATGGTTGAGAACATTAACGTCGAAAGAGTTAAATCTCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGTGGTACTTCATCCAGGGGTAATCAAGTCGGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGACTTCTATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCATCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGTTCCCGGAAACCGTCTCGTACTGCCACAGAATGTTCCGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGTTAGAGTGTCCAATATGTTGGGAATCCTTCAACATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACTTTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTATTTCCTTTTGTGGATGGTTGAGAACATTAACGTCGAAAGAGTTAAATCTCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGTGGTACTTCATCCAGGGGTAATCAAGTCGGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGACTTCTATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCATCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

Protein sequence

MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNANSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT
Homology
BLAST of HG10003818 vs. NCBI nr
Match: XP_004140883.1 (uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.1 uncharacterized protein LOC101203968 [Cucumis sativus] >KGN46000.1 hypothetical protein Csa_004783 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 1.3e-142
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQV HNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. NCBI nr
Match: XP_038885347.1 (uncharacterized protein LOC120075760 [Benincasa hispida] >XP_038885348.1 uncharacterized protein LOC120075760 [Benincasa hispida] >XP_038885349.1 uncharacterized protein LOC120075760 [Benincasa hispida])

HSP 1 Score: 510.8 bits (1314), Expect = 7.3e-141
Identity = 257/265 (96.98%), Postives = 260/265 (98.11%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSS+K S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSQKQSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQV H+NLRRGHHVRQLD QGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHSNLRRGHHVRQLDLQGPNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. NCBI nr
Match: XP_008445733.1 (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >KAA0033044.1 uncharacterized protein E6C27_scaffold269G001500 [Cucumis melo var. makuwa] >TYK03459.1 uncharacterized protein E5676_scaffold121G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 505.8 bits (1301), Expect = 2.3e-139
Identity = 254/265 (95.85%), Postives = 259/265 (97.74%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQV HNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 245/265 (92.45%), Postives = 252/265 (95.09%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+KP+ TATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQVGH+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL SSL KLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of HG10003818 vs. NCBI nr
Match: KAG7036804.1 (hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 245/265 (92.45%), Postives = 252/265 (95.09%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+KP+ TATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQVGH+NLRRGHHVRQLD Q PNN 
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNT 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL SSL KLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of HG10003818 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 0

Query: 34  LSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 93
           L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +            
Sbjct: 9   LNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------G 68

Query: 94  ISCPWCNLLS 104
           + CP+C+ ++
Sbjct: 69  VRCPFCSKIT 68

BLAST of HG10003818 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 0

Query: 26  ATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 85
           A   +   L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 86  LPVQLPLFISCPWCNLLS 104
                   + CP+C+ ++
Sbjct: 62  -------GVRCPFCSKIT 69

BLAST of HG10003818 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05
Identity = 25/65 (38.46%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 35  SSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 94
           SS    E LECP C  S+N+ +  P VL C H++C+ C+  L  +  K+         FI
Sbjct: 133 SSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FI 189

Query: 95  SCPWC 100
           SCP C
Sbjct: 193 SCPTC 189

BLAST of HG10003818 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0

Query: 41  EVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 100
           E LECP C  ++N+ +  P VL C H++C+ C+  L  +  K+         FISCP C+
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FISCPTCH 194

BLAST of HG10003818 vs. ExPASy TrEMBL
Match: A0A0A0K8G4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.4e-143
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQV HNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. ExPASy TrEMBL
Match: A0A1S3BDF4 (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 254/265 (95.85%), Postives = 259/265 (97.74%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQV HNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. ExPASy TrEMBL
Match: A0A5D3BZF8 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00650 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 254/265 (95.85%), Postives = 259/265 (97.74%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK S TATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQV HNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERL SSLRKLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of HG10003818 vs. ExPASy TrEMBL
Match: A0A6J1GC00 (uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC111452589 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132
Identity = 245/265 (92.45%), Postives = 252/265 (95.09%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K + TATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQVGH+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL SSL KLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of HG10003818 vs. ExPASy TrEMBL
Match: A0A6J1K9F8 (uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 244/265 (92.08%), Postives = 251/265 (94.72%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+KP+ TATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQVGH+NLRRGHHVRQLD Q  NNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDLQRSNNA 180

Query: 181 NSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL SSL KLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of HG10003818 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-81
Identity = 163/266 (61.28%), Postives = 194/266 (72.93%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  R+P     ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNN 180
           F+LWMVE +N ER  S      D       G +    +     L   HH     SQ   +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTV 240
            + + H    + + +SLRK LVFFV LTAKFPLV+IFLLIILYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

BLAST of HG10003818 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-81
Identity = 163/266 (61.28%), Postives = 194/266 (72.93%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  R+P     ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGPNN 180
           F+LWMVE +N ER  S      D       G +    +     L   HH     SQ   +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLVTV 240
            + + H    + + +SLRK LVFFV LTAKFPLV+IFLLIILYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

BLAST of HG10003818 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 3.3e-67
Identity = 146/271 (53.87%), Postives = 187/271 (69.00%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKPSRTATECSDDELSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GLK S +  ++ +++CSDDE+S+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENINVERVK-----SH-SAFSGDQLVFPVSGTS-SRGNQVGHNNLRRGHHVRQL 180
           FLLWMVE++N +R       SH S  + +Q   P    S S GN   +NNL     +R  
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLR-- 180

Query: 181 DSQGPNNANSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILA 240
            +Q  +    H HS    R L S  K L FF+  T+KFP VIIFLLI+ +A+P S  ILA
Sbjct: 181 -NQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILA 240

Query: 241 LYVLVTVLFALPSFLILYFAYPSLDWLMREI 264
           LY L+T+LFA+P+ L+LYFAYP L+ L+ EI
Sbjct: 241 LYFLLTILFAVPAGLVLYFAYPILERLVNEI 267

BLAST of HG10003818 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 129/268 (48.13%), Postives = 167/268 (62.31%), Query Frame = 0

Query: 1   MWNFASNCV--AGCAGLKSSSRKPSRTATECSDDELSSDGREEVLECPICWESFNIVENV 60
           MWN AS  +     +  + ++ KP R   + S D   +  +EE LECPICWESFN+VENV
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDGRKTT-KEEKLECPICWESFNVVENV 60

Query: 61  PHVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCK 120
           P+VLWCGHT+CK C+LGLQ A V+K   LP QLP F++CPWCN+LS RLV  G ++FP K
Sbjct: 61  PYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSK 120

Query: 121 NYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVGHNNLRRGHHVRQLDSQGP 180
           N++LLWMVE++N  R ++ S    D           R    G +N   G      +    
Sbjct: 121 NFYLLWMVESMNGSRSEAPS----DNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSWW 180

Query: 181 NNANSHFHSFNLERLLSSLRKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYVLV 240
           N     F  F   RL  S+RK +    HL AKFPLV+IFLL+ LYA+P SAA+L +Y  V
Sbjct: 181 NGVTRGF--FRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 TFALAVPSFLVLYFAFPSLNWLIREIAT 261

BLAST of HG10003818 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding )

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0

Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004140883.11.3e-14298.11uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.1 uncharact... [more]
XP_038885347.17.3e-14196.98uncharacterized protein LOC120075760 [Benincasa hispida] >XP_038885348.1 unchara... [more]
XP_008445733.12.3e-13995.85PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 P... [more]
XP_023523716.12.1e-13292.45uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.... [more]
KAG7036804.12.1e-13292.45hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Q130491.2e-0535.71E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2[more]
Q8CH721.2e-0533.33E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2[more]
Q9H0X66.0e-0538.46RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2[more]
Q8K0W31.3e-0436.67RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0K8G46.4e-14398.11RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 P... [more]
A0A1S3BDF41.1e-13995.85uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=... [more]
A0A5D3BZF81.1e-13995.85RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1GC005.1e-13292.45uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC1114525... [more]
A0A6J1K9F81.1e-13192.08uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874... [more]
Match NameE-valueIdentityDescription
AT3G29270.11.8e-8161.28RING/U-box superfamily protein [more]
AT3G29270.21.8e-8161.28RING/U-box superfamily protein [more]
AT1G69330.13.3e-6753.87RING/U-box superfamily protein [more]
AT1G74370.11.2e-5648.13RING/U-box superfamily protein [more]
AT1G21651.13.3e-0638.98zinc ion binding [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 32..137
e-value: 1.5E-11
score: 45.6
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 45..84
e-value: 7.4E-8
score: 32.3
NoneNo IPR availablePANTHERPTHR46616:SF9OS03G0211100 PROTEINcoord: 1..265
NoneNo IPR availablePANTHERPTHR46616UBIQUITIN-PROTEIN LIGASEcoord: 1..265
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 40..102
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 45..100
score: 10.158304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003818.1HG10003818.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004842 ubiquitin-protein transferase activity