HG10003812 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003812
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr08: 9585471 .. 9585698 (-)
RNA-Seq ExpressionHG10003812
SyntenyHG10003812
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCGGAGAAGATGGGTTTTCTTGCCGGAACTGTGTTCTCCTTCTCTTCGAGTTGCAGCACGCCGACCTCCGGAGAAGAAGGTTCTGATTTTTTAACTTTGAAGAAAGATGAAAACTTCTTGCCGGAGAAGAAGCTCTACGCGAAGTGTTCTCCTAGTATCCTTCTCTTCGACTTGCAGGCGTCGGAATGGAGAAGAAGACTTTGGTTTTTGGACTTTGATTGA

mRNA sequence

ATGGCGCCGGAGAAGATGGGTTTTCTTGCCGGAACTGTGTTCTCCTTCTCTTCGAGTTGCAGCACGCCGACCTCCGGAGAAGAAGGTTCTGATTTTTTAACTTTGAAGAAAGATGAAAACTTCTTGCCGGAGAAGAAGCTCTACGCGAAGTGTTCTCCTAGTATCCTTCTCTTCGACTTGCAGGCGTCGGAATGGAGAAGAAGACTTTGGTTTTTGGACTTTGATTGA

Coding sequence (CDS)

ATGGCGCCGGAGAAGATGGGTTTTCTTGCCGGAACTGTGTTCTCCTTCTCTTCGAGTTGCAGCACGCCGACCTCCGGAGAAGAAGGTTCTGATTTTTTAACTTTGAAGAAAGATGAAAACTTCTTGCCGGAGAAGAAGCTCTACGCGAAGTGTTCTCCTAGTATCCTTCTCTTCGACTTGCAGGCGTCGGAATGGAGAAGAAGACTTTGGTTTTTGGACTTTGATTGA

Protein sequence

MAPEKMGFLAGTVFSFSSSCSTPTSGEEGSDFLTLKKDENFLPEKKLYAKCSPSILLFDLQASEWRRRLWFLDFD
Homology
The following BLAST results are available for this feature:
BLAST of HG10003812 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003812 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003812 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003812 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003812.1HG10003812.1mRNA