HG10003776 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003776
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	sn1-specific diacylglycerol lipase beta isoform X1
Location	Chr08: 8517626 .. 8518433 (-)
RNA-Seq Expression	HG10003776
Synteny	HG10003776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCACCTATAGATAAAATTGAGGAGGCTGCTGTTCTTCATAAATTTGCTGAAGCAGCTTACACGGTATATCAAATGATCCTTTGATCATTTTTTTGTGATGAGAAAATTAAATCTAAGCATGTTGTGCAGGGGCCATTGCTTGATTTTGGAAGAAACCCTCTCTCATTTCCTTGTGCATGGGTGTATCGACAAGGGATATTGACTCCATGGACTCGTAACAAGTAGGTCCTCTATCTAGAATTTTGTTCAATGCAGCATGTTACCTAGATCTATTTTTTTTTGCTTGAACATACAGTTGAAGATATTCTGAGTGCTTATATTTCTCTTTCATCTTCTAACATTTTCTCTCTATTTTTCTTCCACTATAAATTTATCTGCTGTGTTTCCCACTTTTGTAGGCGGCCTGTACTCCATGGTGATAACTGGTGGCGAGGCCATGCTGCAGCCTTTCTTAAATATGTCAAATTACCACCTGAAGTACTTCGAAGAGGGCGTGTTAACCAGGTGATTTTTTTTTTATCATTCTTATCTTTGTCTTCCACATAAAGCCTGGAAATTATTCAGACTTTAGCAGTAATAGGCCTGATTGTAGTGTTTTTTGGTTTAACTTCATTTATTTTTACTCTTATTTATTGATTGTTACATGATCATATTCAGATAAGAAGTACTTATAGGAATTGAAGATTGTTGAAGGGTTTGGTCTGCCTTATTAAGTATTGTGTTCCTTTCTTTTATGTTCTCTAACTCTTTTCCTATCTTATTTTCCAATTGTTTCAAGGTTCCAACACATGGTATGAGTTGA

mRNA sequence

ATGGAGGCACCTATAGATAAAATTGAGGAGGCTGCTGTTCTTCATAAATTTGCTGAAGCAGCTTACACGGGGCCATTGCTTGATTTTGGAAGAAACCCTCTCTCATTTCCTTGTGCATGGGTGTATCGACAAGGGATATTGACTCCATGGACTCGTAACAAGCGGCCTGTACTCCATGGTGATAACTGGTGGCGAGGCCATGCTGCAGCCTTTCTTAAATATGTCAAATTACCACCTGAAGTACTTCGAAGAGGGCGTGTTAACCAGGTTCCAACACATGGTATGAGTTGA

Coding sequence (CDS)

ATGGAGGCACCTATAGATAAAATTGAGGAGGCTGCTGTTCTTCATAAATTTGCTGAAGCAGCTTACACGGGGCCATTGCTTGATTTTGGAAGAAACCCTCTCTCATTTCCTTGTGCATGGGTGTATCGACAAGGGATATTGACTCCATGGACTCGTAACAAGCGGCCTGTACTCCATGGTGATAACTGGTGGCGAGGCCATGCTGCAGCCTTTCTTAAATATGTCAAATTACCACCTGAAGTACTTCGAAGAGGGCGTGTTAACCAGGTTCCAACACATGGTATGAGTTGA

Protein sequence

MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHGDNWWRGHAAAFLKYVKLPPEVLRRGRVNQVPTHGMS

Homology

[Close]

BLAST of HG10003776 vs. NCBI nr
Match: KAA0047190.1 (sn1-specific diacylglycerol lipase beta isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 207 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 266

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 267 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 295

[Close]

BLAST of HG10003776 vs. NCBI nr
Match: XP_008445626.1 (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X7 [Cucumis melo] >XP_008445627.1 PREDICTED: sn1-specific diacylglycerol lipase beta isoform X7 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 94  MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 153

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 154 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 182

[Close]

BLAST of HG10003776 vs. NCBI nr
Match: XP_008445625.1 (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X5 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 314 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 373

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 374 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 402

[Close]

BLAST of HG10003776 vs. NCBI nr
Match: XP_008445624.1 (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X4 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 314 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 373

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 374 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 402

[Close]

BLAST of HG10003776 vs. NCBI nr
Match: XP_008445622.1 (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X1 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 314 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 373

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 374 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 402

[Close]

BLAST of HG10003776 vs. ExPASy TrEMBL
Match: A0A1S3BD59 (sn1-specific diacylglycerol lipase beta isoform X7 OS=Cucumis melo OX=3656 GN=LOC103488587 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 94  MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 153

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 154 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 182

[Close]

BLAST of HG10003776 vs. ExPASy TrEMBL
Match: A0A5A7TVJ7 (Sn1-specific diacylglycerol lipase beta isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83G00700 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 207 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 266

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 267 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 295

[Close]

BLAST of HG10003776 vs. ExPASy TrEMBL
Match: A0A5D3E1T1 (Sn1-specific diacylglycerol lipase beta isoform X6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1280G00080 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 237 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 296

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 297 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 325

[Close]

BLAST of HG10003776 vs. ExPASy TrEMBL
Match: A0A1S3BD58 (sn1-specific diacylglycerol lipase beta isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488587 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 313 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 372

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 373 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 401

[Close]

BLAST of HG10003776 vs. ExPASy TrEMBL
Match: A0A1S3BDV2 (sn1-specific diacylglycerol lipase beta isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488587 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG
Sbjct: 314 MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 373

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 90
           DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ
Sbjct: 374 DNWWRGHAAAFLKYVKLPPEVLRRGRVNQ 402

[Close]

BLAST of HG10003776 vs. TAIR 10
Match: AT1G05790.1 (lipase class 3 family protein )

HSP 1 Score: 144.8 bits (364), Expect = 3.5e-35
Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAP   ++EAA+LHKFAEAAYTGPLLD GRNP  F C W+ RQGILTPW+R  RP L G
Sbjct: 224 MEAPAFHLQEAAMLHKFAEAAYTGPLLDVGRNPALFLCTWICRQGILTPWSRKWRPKLDG 283

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRV 88
           DNWWRGHAAAFLK++  P  VLRRGR+
Sbjct: 284 DNWWRGHAAAFLKFINFPAHVLRRGRI 310

[Close]

BLAST of HG10003776 vs. TAIR 10
Match: AT1G05790.2 (lipase class 3 family protein )

HSP 1 Score: 144.8 bits (364), Expect = 3.5e-35
Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1   MEAPIDKIEEAAVLHKFAEAAYTGPLLDFGRNPLSFPCAWVYRQGILTPWTRNKRPVLHG 60
           MEAP   ++EAA+LHKFAEAAYTGPLLD GRNP  F C W+ RQGILTPW+R  RP L G
Sbjct: 53  MEAPAFHLQEAAMLHKFAEAAYTGPLLDVGRNPALFLCTWICRQGILTPWSRKWRPKLDG 112

Query: 61  DNWWRGHAAAFLKYVKLPPEVLRRGRV 88
           DNWWRGHAAAFLK++  P  VLRRGR+
Sbjct: 113 DNWWRGHAAAFLKFINFPAHVLRRGRI 139

The following BLAST results are available for this feature:

BLAST of HG10003776 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047190.1	1.3e-47	100.00	sn1-specific diacylglycerol lipase beta isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008445626.1	1.3e-47	100.00	PREDICTED: sn1-specific diacylglycerol lipase beta isoform X7 [Cucumis melo] >XP...	[more]
XP_008445625.1	1.3e-47	100.00	PREDICTED: sn1-specific diacylglycerol lipase beta isoform X5 [Cucumis melo]	[more]
XP_008445624.1	1.3e-47	100.00	PREDICTED: sn1-specific diacylglycerol lipase beta isoform X4 [Cucumis melo]	[more]
XP_008445622.1	1.3e-47	100.00	PREDICTED: sn1-specific diacylglycerol lipase beta isoform X1 [Cucumis melo]	[more]

BLAST of HG10003776 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10003776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BD59	6.3e-48	100.00	sn1-specific diacylglycerol lipase beta isoform X7 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TVJ7	6.3e-48	100.00	Sn1-specific diacylglycerol lipase beta isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A5D3E1T1	6.3e-48	100.00	Sn1-specific diacylglycerol lipase beta isoform X6 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BD58	6.3e-48	100.00	sn1-specific diacylglycerol lipase beta isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3BDV2	6.3e-48	100.00	sn1-specific diacylglycerol lipase beta isoform X4 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of HG10003776 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05790.1	3.5e-35	71.26	lipase class 3 family protein	[more]
AT1G05790.2	3.5e-35	71.26	lipase class 3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47030	LIPASE CLASS 3 FAMILY PROTEIN	coord: 1..90
None	No IPR available	PANTHER	PTHR47030:SF2	LIPASE CLASS 3 FAMILY PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003776.1	HG10003776.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0016021	integral component of membrane