HG10003695 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003695
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr08: 6132588 .. 6134139 (+)
RNA-Seq ExpressionHG10003695
SyntenyHG10003695
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTTTTAGGTTTCTAGGTTTCCGTGTTCACCGTCCGATTCTGTCGCCATTGAAAGATTCCTACCCCGCTGGGTCACAACCGCCTCCGACGACGGTTGACCCACCGGTTGAAGAAACGGTAAGTTTTCCTCTCTTTTGAAGGCCTAAGCTAGAAATTTCACTCTACACGAGTAAATTACATTTTTTATTCTTGAAGATTGGATTTTATGTCAAATTAGTCTTTAGGTTACAAAACTAAACAATCTAAGTTCCTAACCTTTAGTCTGTTAGTTAAATAATATTTAGTAGAAGTTGACATGGCAGTTTTTAAAATTTTAAAAATTATTTTCCATTATTATTATTGGAAAAAAAAAACCCATGTTTCCCCCTCCCCTTGCTTCTCTCCCTTTCTCTCCCCCAACCTTTTCCCTTCCCCACCTCCGTTCTAGTCATTGTCCAACCGCCACCCGCCGCCAGCGGCACTCCTCGTTGTTCTTTGTTTGTTTTGTTTTGTGTTTTCTTAGCCAAAGGGACTGTTTCATCCTTCTTTTTTTCCTTTCTTTTTTCTGTTCAGTTTTAGATTTAAGGGGAGTGGTGGATTTGTAGAACAAGAAGATGGGAGAGAGTCCATTTTAGATTTTAAGAAAATGATGGGACGTTTTTTTTTTTTTCATATTAAAGGAAAAAAGGGGGAGGGGTTGGAGAAGAAGACATGAGAATTTTTAGATTGTAGAAAAAGTTGGATATTTTTTTTTCAAATTGAAAAAGAAGAGAGGGGAGAGAGACGAGGAAAGAGAAAGAAGAAGAAAAAGACGGAGAAGAAAGAAAAGAAACAAAAAAAAAAAAAGAAAGAAGATGTTGGAGCCAGCAGAAAGGACCGATGTTGACATCGACACCGGTCCTTTCTCCTAGCACCGAAATGAGGGAAAGGTAGGTGAAGAGGGAACAAATTAAGGGTTTTTTTTAAGTATTTGTCACGTTAGGTTTTAACATTAATTGAACATTTATAAAATCTTAAGGACTTAAACCTTGTTCAATTTTAAAACTTAGAAACTAATTTGACTCAAAACTGAAAATTGAGAGAGAGAAAACATATAATTTACCCTGTATATATAATCTCACTTCACCATAAATTTGAACACTTTATTTCTTCAAACTTATTCAAATAGTTGTTAAAAACATTTTTATAAAGAAATTACGTACTAAACTATTACGAATTTTAAAATGAAATAAACTAAATCAATACAAATTTTAAAACATATAGAAACGTAAATTATTAAAATCTAACATCAAAGACATTTTTTTTTCTGTAGAAAAGATGCATCCTTTGTACTTTCAATAATGTTTTCTAACCAATAGTTTTATAATTTAGCAATATAGAATGCAATATATGTAAGTTAAGTTAAATTTTATTATTTTTTTAATTATCAATTATATTCAAAAGGTTAAGAACCTGAGGATGTTTATTGGATTTGTTGGCTTTTTAGGGGCAGGAAGAAAGTGAGTTGGCTAGACGAAATCCTCCTCCGCCGCCACCGAGCAACGGAGGTGGTGGCCAGACTACCTGA

mRNA sequence

ATGGCCATTTTTAGGTTTCTAGGTTTCCGTGTTCACCGTCCGATTCTGTCGCCATTGAAAGATTCCTACCCCGCTGGGTCACAACCGCCTCCGACGACGGTTGACCCACCGGTTGAAGAAACGGGGCAGGAAGAAAGTGAGTTGGCTAGACGAAATCCTCCTCCGCCGCCACCGAGCAACGGAGGTGGTGGCCAGACTACCTGA

Coding sequence (CDS)

ATGGCCATTTTTAGGTTTCTAGGTTTCCGTGTTCACCGTCCGATTCTGTCGCCATTGAAAGATTCCTACCCCGCTGGGTCACAACCGCCTCCGACGACGGTTGACCCACCGGTTGAAGAAACGGGGCAGGAAGAAAGTGAGTTGGCTAGACGAAATCCTCCTCCGCCGCCACCGAGCAACGGAGGTGGTGGCCAGACTACCTGA

Protein sequence

MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPPPPSNGGGGQTT
Homology
BLAST of HG10003695 vs. NCBI nr
Match: XP_008464347.1 (PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo] >KAA0039202.1 uncharacterized protein E6C27_scaffold121G001200 [Cucumis melo var. makuwa] >TYK18469.1 uncharacterized protein E5676_scaffold607G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1   MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRN-PPPPPPS 60
           MA +RFLGFRVHRPILS  +DSYP  SQPPPTTVDPP+E+ G+EE E ARRN PPPPPPS
Sbjct: 48  MAFYRFLGFRVHRPILSSSEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPS 107

Query: 61  NGGGGQT 67
           NGGGG+T
Sbjct: 108 NGGGGRT 114

BLAST of HG10003695 vs. NCBI nr
Match: XP_031743811.1 (uncharacterized protein LOC116404676 [Cucumis sativus] >KAE8646593.1 hypothetical protein Csa_005180 [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 4.7e-12
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 1   MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRN-PPPPPPS 60
           MA +RFLGF V    L   +DSYP    PPP T DPP+E +G+EE E ARRN PPPPPPS
Sbjct: 49  MAFYRFLGFCVPSSTLPSSEDSYPVDPHPPPKTDDPPIENSGEEEREFARRNPPPPPPPS 108

Query: 61  NGGGGQT 67
           NGGGG+T
Sbjct: 109 NGGGGRT 115

BLAST of HG10003695 vs. NCBI nr
Match: KAG6592220.1 (hypothetical protein SDJN03_14566, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0

Query: 1  MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPPPPSN 60
          ++I RFLGF V+  I +  ++++   S P PT VDPPV+E+GQEE+ LA+R PPPPPPSN
Sbjct: 22 ISISRFLGFHVN-TISALSENTHLDASHPSPTDVDPPVDESGQEETALAKRTPPPPPPSN 81

Query: 61 GGGGQT 67
          GGGGQT
Sbjct: 82 GGGGQT 86

BLAST of HG10003695 vs. NCBI nr
Match: KAG6585921.1 (hypothetical protein SDJN03_18654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.1 bits (170), Expect = 8.3e-09
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0

Query: 2  AIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPPPPSNG 61
          +I RFLGF V+  I SP +D++  GS PPP  V+PPV+++ QE+S LA+R PPPPPPSNG
Sbjct: 16 SISRFLGFHVN-TISSPSEDTHLDGSHPPPMEVNPPVDKSEQEKSVLAKRTPPPPPPSNG 75

Query: 62 GGGQT 67
            GQT
Sbjct: 76 DSGQT 79

BLAST of HG10003695 vs. NCBI nr
Match: XP_008464348.1 (PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-06
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 1   MAIFRFLGFR----VHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPP 60
           +AI RF GF+     +RP  S L+D Y AGS PP T VDPP +++ +EESE  R + PPP
Sbjct: 78  IAILRFFGFKRNAPPYRPASSSLEDCYTAGSNPPSTAVDPPHDDS-EEESEYYRPHVPPP 137

Query: 61  PP-SNGGGGQ 66
           PP S GGGGQ
Sbjct: 138 PPWSTGGGGQ 146

BLAST of HG10003695 vs. ExPASy TrEMBL
Match: A0A5A7T6U0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00390 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-20
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1   MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRN-PPPPPPS 60
           MA +RFLGFRVHRPILS  +DSYP  SQPPPTTVDPP+E+ G+EE E ARRN PPPPPPS
Sbjct: 48  MAFYRFLGFRVHRPILSSSEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPS 107

Query: 61  NGGGGQT 67
           NGGGG+T
Sbjct: 108 NGGGGRT 114

BLAST of HG10003695 vs. ExPASy TrEMBL
Match: A0A1S3CMT1 (uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-20
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1   MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRN-PPPPPPS 60
           MA +RFLGFRVHRPILS  +DSYP  SQPPPTTVDPP+E+ G+EE E ARRN PPPPPPS
Sbjct: 48  MAFYRFLGFRVHRPILSSSEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPS 107

Query: 61  NGGGGQT 67
           NGGGG+T
Sbjct: 108 NGGGGRT 114

BLAST of HG10003695 vs. ExPASy TrEMBL
Match: A0A0A0K8Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020170 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 1  MAIFRFLGFRVHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRN-PPPPPPS 60
          MA +RFLGF V    L   +DSYP    PPP T DPP+E +G+EE E ARRN PPPPPPS
Sbjct: 26 MAFYRFLGFCVPSSTLPSSEDSYPVDPHPPPKTDDPPIENSGEEEREFARRNPPPPPPPS 85

Query: 61 NGGGGQT 67
          NGGGG+T
Sbjct: 86 NGGGGRT 92

BLAST of HG10003695 vs. ExPASy TrEMBL
Match: A0A5D3D4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00380 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 1   MAIFRFLGFR----VHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPP 60
           +AI RF GF+     +RP  S L+D Y AGS PP T VDPP +++ +EESE  R + PPP
Sbjct: 39  IAILRFFGFKRNAPPYRPASSSLEDCYTAGSNPPSTAVDPPHDDS-EEESEYYRPHVPPP 98

Query: 61  PP-SNGGGGQ 66
           PP S GGGGQ
Sbjct: 99  PPWSTGGGGQ 107

BLAST of HG10003695 vs. ExPASy TrEMBL
Match: A0A1S3CLD8 (uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 1   MAIFRFLGFR----VHRPILSPLKDSYPAGSQPPPTTVDPPVEETGQEESELARRNPPPP 60
           +AI RF GF+     +RP  S L+D Y AGS PP T VDPP +++ +EESE  R + PPP
Sbjct: 78  IAILRFFGFKRNAPPYRPASSSLEDCYTAGSNPPSTAVDPPHDDS-EEESEYYRPHVPPP 137

Query: 61  PP-SNGGGGQ 66
           PP S GGGGQ
Sbjct: 138 PPWSTGGGGQ 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008464347.11.4e-1977.61PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo] >KAA0039202.1 unc... [more]
XP_031743811.14.7e-1262.69uncharacterized protein LOC116404676 [Cucumis sativus] >KAE8646593.1 hypothetica... [more]
KAG6592220.11.3e-0959.09hypothetical protein SDJN03_14566, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6585921.18.3e-0958.46hypothetical protein SDJN03_18654, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008464348.15.0e-0654.29PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T6U06.6e-2077.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CMT16.6e-2077.61uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=... [more]
A0A0A0K8Z62.3e-1262.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020170 PE=4 SV=1[more]
A0A5D3D4J42.4e-0654.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CLD82.4e-0654.29uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003695.1HG10003695.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane