HG10003630 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003630
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Thioredoxin-like protein
Location	Chr08: 4541404 .. 4543810 (-)
RNA-Seq Expression	HG10003630
Synteny	HG10003630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCCATTTCAACTTCAGCTTATCCTCTCCTCACCTCAGACCGCTCCAATCGTTTGGCTGCAAATGCTTCTTCTTCATCCAGATTCTCTTCCTCCTCATCTCTACACCTACCGCTTCAGCTTCAACGTGTTCGACTTGGAAACAGTCGGATTTCAGCTCCGTCGCGGTCTCGATCCTTTCCTGTGGTAATAATCTCTTTTCTCAGATCTGTTTGTCGTTTTAATGGAGGAACCTGATAATGAAATTGGAATCCATGGACTTTCCCTTTGTTTTCCTAATTTTCAGCGACTTATTGTTAATTTTGGGGTTCTTCGCCTAATTCCAGCTATAAACATTCTGGAGAACGAAGCTGATGTGATTTAGTTGTTTTATTATACTTCTGGAATTCCTTTTATTTGAATTTTGATTGTAACCGTTTTTGCGGCTTCTTACGCAGAACTAGAACCTTCATAGTTCATTCATTGTATTGGAGTTCGCTCGTCTAGTTGCAGATTAGGATTTTGTTTCTATCTGCTTCTATTATTTTTCAGATTCATTCGAAATTTCAGTTCCGAAGTAGTTTTCTGCATTATTGTTCACTCTGGAAAGATTGCATTTCCCTTTTTGTCGACACGCCTTGCTTCATGCTGTTAATATCACAACTGCTACATTCGTATTTTTCCTGATTCTTATGTAGCTTGTGTAAAAATGGATGACAATTTGAGTTCAAACTACTGTAATGAATAACGATGTTGTGCAAATTAACTTCTGTAGGTCAAGGCAAAGAACCAAACGTTTTCTTCCTTCGATGATTTACTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCAACCTGGTTAGTCTCTTTATCTCTCTCTCACGTGCACACACCTACTTTCAAAGTAATCGCATTGCTGGCGTCTAAGAAGGACACTTTAGTTTGGCTAACATGTCCGTGTTCGACACTTGTTGGACATGTACTGGACACTTGTTGGACATGTACTGGACACTTGTTAGTGCATTAAATGTGTTAGACATGCATACAACACTTGTTGAGAACACTGAAAAGACATATATACGACATAGACGACAATAATAATAACTTTTGAATGTGAAATACATAAAGCTAAGTTTTTAAGTATATAAATGCATCAATCCATTTATTTGATTTTTTTTATAAAAATGATATATATTTTAAAAAAGATGTATTTTAATAAACTTGTCCTTACCGTGTCGTGTCCTAGATTTTTAAAATATGACGTGCTGCCGTGGCATTTTCGTGTCCTATTCGTGTTTCATATCCATATTTGTGCTTCTTAGGCTGGTGTAGTATTATATATATTTCACCACACTTCACTCTCACAATGGTATTGGTAATCTGTGGGAATTAACGTGTAATTTCAAAATAAGCCATTGGTTCTCTGGAGCAATAAGCAAGTTAGTGCTTGATTGTTGAGAAGAAAATGAGTCATCGGGGTTCGATTGTAGAACAGATTATTTTCTTGTAAAGAAAAGAAATGTAATGTTTTTAAATGATGAGTAAAACGTGATATGCCCTGTATTCTTTCATTTTTATTCAATGAAAGTGGTTTCAGTTATAAAAAAAGAAAAAAAAAAGAAAATGATGAGTAAACATGGCTCCTCTATTGCAGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCGACGCTGATTGACAAAGTCCAGGTGGTCAAGATTGACACTGAAAAATATCCAGCCATCGCTGATAAATACCGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCTCTTGACCGATTCGTAAGTGAAAGCTTTGTATTATTTCTAGCCATTTGGAGATATATCAAATGTACGACTAACTCTATATGTGTGAAGAAATGACATATATGTTTCAGAATCTTATATTCAGTTTAATTTTTAAGTTGAACTAAAATGGGAAGTTTATCAAATGATTAGTTCTGTCAAGTAATTATACTCGAAGCTTTTATTAAGATTTATCCATTATTGCTCTGAAACCATTTTCTACTGTATCTTTACTCTACTCGTGCACCCAGTTTAATTTCAAAGAATTAAAAAGGTATGCACAAATTGTCAATGTGCAGTTTACTCCCTTTTAAACACATTAGCACATCCTCATTCTTGCTAGAATACAACCATTTTGCCTTGTCCTTTAGTTGTAGTGAGATGAGATCTCATAAACAATCTTTCAACTTGTTAGAGATTCCTGTTGAAATGTCAGTCAAACGGCCTTTTCAGTTTCTTGTGCGTAGATTATTTATTGTTTATTTTAAACATGAATGTAAATTATATATATGCAGGAAGGAGCTTTGGCTGCGCGTGAACTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

mRNA sequence

ATGGCGGCCTCCATTTCAACTTCAGCTTATCCTCTCCTCACCTCAGACCGCTCCAATCGTTTGGCTGCAAATGCTTCTTCTTCATCCAGATTCTCTTCCTCCTCATCTCTACACCTACCGCTTCAGCTTCAACGTGTTCGACTTGGAAACAGTCGGATTTCAGCTCCGTCGCGGTCTCGATCCTTTCCTGTGGTCAAGGCAAAGAACCAAACGTTTTCTTCCTTCGATGATTTACTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCAACCTGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCGACGCTGATTGACAAAGTCCAGGTGGTCAAGATTGACACTGAAAAATATCCAGCCATCGCTGATAAATACCGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCTCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAACTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

Coding sequence (CDS)

ATGGCGGCCTCCATTTCAACTTCAGCTTATCCTCTCCTCACCTCAGACCGCTCCAATCGTTTGGCTGCAAATGCTTCTTCTTCATCCAGATTCTCTTCCTCCTCATCTCTACACCTACCGCTTCAGCTTCAACGTGTTCGACTTGGAAACAGTCGGATTTCAGCTCCGTCGCGGTCTCGATCCTTTCCTGTGGTCAAGGCAAAGAACCAAACGTTTTCTTCCTTCGATGATTTACTGGCCAACTCTGACAAACCTGTGTTAGTCGACTTCTATGCAACCTGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCGACGCTGATTGACAAAGTCCAGGTGGTCAAGATTGACACTGAAAAATATCCAGCCATCGCTGATAAATACCGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCTCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAACTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

Protein sequence

MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSRSFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ

Homology

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BLAST of HG10003630 vs. NCBI nr
Match: XP_038884039.1 (thioredoxin-like protein slr0233 [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MA SISTSAYPLLTSDRSNRL AN SSSSRFSSSSSLHLPLQL+RVRLGN+RISAPSRSR
Sbjct: 1   MATSISTSAYPLLTSDRSNRLPANDSSSSRFSSSSSLHLPLQLRRVRLGNTRISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSA LIDKVQV+K
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVIK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. NCBI nr
Match: XP_008463079.1 (PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >XP_016902975.1 PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >KAA0035008.1 thioredoxin-like protein [Cucumis melo var. makuwa] >TYK02348.1 thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 5.4e-76
Identity = 156/174 (89.66%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAAS STS YPLLTS RSNRL A  SSSS  SSSSSLHLPLQL+R RLGN+RIS PS SR
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VSA LIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. NCBI nr
Match: XP_004138379.1 (uncharacterized protein LOC101213340 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 5.0e-74
Identity = 154/174 (88.51%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAAS STS YP+LTS RSNRL A  SSSS  S SSSLHLPLQL+R  L N+RIS PS S 
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILEQVSA LIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. NCBI nr
Match: XP_022974037.1 (thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxin Y1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 152/174 (87.36%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAASISTS YPLLTS+RSNR AAN SSSSR  SSSSL LP+QL+ VRLGN  ISAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
            FPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  L D VQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGALAA ELIQRIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of HG10003630 vs. NCBI nr
Match: XP_022152246.1 (thioredoxin Y2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-72
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAAN-ASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRS 60
           MAASISTS YPLLTS+RSNR  AN +SSSSRFSSSSSLHLP Q +  RLGN+ ISAPSRS
Sbjct: 1   MAASISTSPYPLLTSERSNRFPANDSSSSSRFSSSSSLHLPPQFRCFRLGNNGISAPSRS 60

Query: 61  RSFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVV 120
           R  PVVKAKNQTFSSFDDLLANSDKPV VDFYATWCGPCQFMVPILE+VSATL D VQVV
Sbjct: 61  RILPVVKAKNQTFSSFDDLLANSDKPVFVDFYATWCGPCQFMVPILEKVSATLGDTVQVV 120

Query: 121 KIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           KIDTEKYPAIADKY+IEALPTFILFKDGK LDRFEGAL AR+LIQRIEDSLKVKQ
Sbjct: 121 KIDTEKYPAIADKYKIEALPTFILFKDGKLLDRFEGALTARDLIQRIEDSLKVKQ 175

[Close]

BLAST of HG10003630 vs. ExPASy Swiss-Prot
Match: Q6NPF9 (Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.9e-50
Identity = 109/172 (63.37%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 4   SISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRI-SAPSRSRSF 63
           S+S+S  P L S  S+ ++A AS      S S++     ++RVR G+ +  S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFAS-----RSISAVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  P-VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS TL DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of HG10003630 vs. ExPASy Swiss-Prot
Match: Q8L7S9 (Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.6e-45
Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MAASISTS-AYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRS 60
           MA S++T+   P  T + SN       S+S   + SS+ LP Q++R       + +PS S
Sbjct: 1   MAISLATAYISPCFTPESSN-------SASPSRTLSSVRLPSQIRRF----GSVQSPSSS 60

Query: 61  RSF---PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKV 120
             F    V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS TL D +
Sbjct: 61  TRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 120

Query: 121 QVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
            VVKIDTEKYP++A+KY+IEALPTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 121 AVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of HG10003630 vs. ExPASy Swiss-Prot
Match: Q5JMR9 (Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0963400 PE=3 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.8e-41
Identity = 95/169 (56.21%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 4   SISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSRSFP 63
           S +T+A    T  R   L A +S++   S++  +        V  G  R +APSR  +  
Sbjct: 6   STTTAAAASPTPCRPAALVARSSAAPLRSAAPVV--------VAAGLRRAAAPSRRGATL 65

Query: 64  VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKIDT 123
            V+AK QTFSSFD+LL  S+KPVLVDFYATWCGPCQ+MVPIL++VS  L DK+QVVKIDT
Sbjct: 66  RVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEKLGDKIQVVKIDT 125

Query: 124 EKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKV 173
           EKY +IA++Y+IEALPTFI+FK+GKP  RFEGAL A +LIQ+IE +L+V
Sbjct: 126 EKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALEV 166

[Close]

BLAST of HG10003630 vs. ExPASy Swiss-Prot
Match: P52232 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0233 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-30
Identity = 60/101 (59.41%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 67  AKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKIDTEKY 126
           A  + F++F ++LA S KPVLVDFYATWCGPCQ M PILEQV + L  ++QVVKIDT+KY
Sbjct: 2   AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61

Query: 127 PAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
           PAIA +Y+I++LPT +LFK G+P+ R EG   A +LIQ+++
Sbjct: 62  PAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQ 102

[Close]

BLAST of HG10003630 vs. ExPASy Swiss-Prot
Match: O30974 (Thioredoxin OS=Mycolicibacterium smegmatis OX=1772 GN=trxA PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 71  TFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKI--DTEKYPA 130
           T  SF   +  S KPVLVDF+ATWCGPC+ + P+LE+++A   D++ V KI  D +  PA
Sbjct: 11  TDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPA 70

Query: 131 IADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSL 171
            A  +++ ++PT ILFKDG P+ R  GA     L++ + D+L
Sbjct: 71  TARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112

[Close]

BLAST of HG10003630 vs. ExPASy TrEMBL
Match: A0A1S3CIC6 (thioredoxin-like protein slr0233 OS=Cucumis melo OX=3656 GN=LOC103501315 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76
Identity = 156/174 (89.66%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAAS STS YPLLTS RSNRL A  SSSS  SSSSSLHLPLQL+R RLGN+RIS PS SR
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VSA LIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. ExPASy TrEMBL
Match: A0A5D3BTP9 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00410 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76
Identity = 156/174 (89.66%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAAS STS YPLLTS RSNRL A  SSSS  SSSSSLHLPLQL+R RLGN+RIS PS SR
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VSA LIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. ExPASy TrEMBL
Match: A0A0A0K7X7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014850 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 154/174 (88.51%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAAS STS YP+LTS RSNRL A  SSSS  S SSSLHLPLQL+R  L N+RIS PS S 
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILEQVSA LIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of HG10003630 vs. ExPASy TrEMBL
Match: A0A6J1I964 (thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 152/174 (87.36%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRSR 60
           MAASISTS YPLLTS+RSNR AAN SSSSR  SSSSL LP+QL+ VRLGN  ISAPSRSR
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVK 120
            FPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILE+VS  L D VQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGALAA ELIQRIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of HG10003630 vs. ExPASy TrEMBL
Match: A0A6J1DH52 (thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020017 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAAN-ASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRS 60
           MAASISTS YPLLTS+RSNR  AN +SSSSRFSSSSSLHLP Q +  RLGN+ ISAPSRS
Sbjct: 1   MAASISTSPYPLLTSERSNRFPANDSSSSSRFSSSSSLHLPPQFRCFRLGNNGISAPSRS 60

Query: 61  RSFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVV 120
           R  PVVKAKNQTFSSFDDLLANSDKPV VDFYATWCGPCQFMVPILE+VSATL D VQVV
Sbjct: 61  RILPVVKAKNQTFSSFDDLLANSDKPVFVDFYATWCGPCQFMVPILEKVSATLGDTVQVV 120

Query: 121 KIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           KIDTEKYPAIADKY+IEALPTFILFKDGK LDRFEGAL AR+LIQRIEDSLKVKQ
Sbjct: 121 KIDTEKYPAIADKYKIEALPTFILFKDGKLLDRFEGALTARDLIQRIEDSLKVKQ 175

[Close]

BLAST of HG10003630 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 198.4 bits (503), Expect = 4.9e-51
Identity = 109/172 (63.37%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 4   SISTSAYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRI-SAPSRSRSF 63
           S+S+S  P L S  S+ ++A AS      S S++     ++RVR G+ +  S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFAS-----RSISAVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  P-VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS TL DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of HG10003630 vs. TAIR 10
Match: AT1G43560.1 (thioredoxin Y2 )

HSP 1 Score: 181.8 bits (460), Expect = 4.7e-46
Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MAASISTS-AYPLLTSDRSNRLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRISAPSRS 60
           MA S++T+   P  T + SN       S+S   + SS+ LP Q++R       + +PS S
Sbjct: 1   MAISLATAYISPCFTPESSN-------SASPSRTLSSVRLPSQIRRF----GSVQSPSSS 60

Query: 61  RSF---PVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKV 120
             F    V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS TL D +
Sbjct: 61  TRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 120

Query: 121 QVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
            VVKIDTEKYP++A+KY+IEALPTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 121 AVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of HG10003630 vs. TAIR 10
Match: AT1G50320.1 (thioredoxin X )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 73  SSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLIDKVQVVKIDTEKYPAIADK 132
           S F   +  S +PVLV+F ATWCGPC+ + P +E +S    DK+ +VKID +  P +  +
Sbjct: 77  SEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAE 136

Query: 133 YRIEALPTFILFKDGK--PLDRFEGALAARELIQRIEDSL 171
           +++  LP FILFKDGK  P  R EGA+   +L + I+  L
Sbjct: 137 FKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

[Close]

BLAST of HG10003630 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 57/173 (32.95%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 1   MAASI-STSAYPLLTSDRSN-----RLAANASSSSRFSSSSSLHLPLQLQRVRLGNSRIS 60
           +AAS+ S+SA P ++  R +           SS S  + S+SL    + +  R G  RI+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGG--RIA 77

Query: 61  APSRSRSFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSATLID 120
             ++  +   V+  N + S +   +  SD PVLV+F+A WCGPC+ + PI++Q++     
Sbjct: 78  CEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAG 137

Query: 121 KVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
           K +  KI+T++ P  A++Y I ++PT I+FK G+  D   GA+    L + IE
Sbjct: 138 KFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIE 188

[Close]

BLAST of HG10003630 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-13
Identity = 51/185 (27.57%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 1   MAASISTSAYPLLTSDRSNRLAANASSSSRFS--------SSSSLHLPLQLQRVRLGNSR 60
           MAA   TS  P+     +  ++++ S+SS  S         SS L + L L    L +  
Sbjct: 1   MAAFTCTSRPPISLRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH 60

Query: 61  ISAPSRSRSFPVVKAKNQTF-------SSFDDLLANSDKPVLVDFYATWCGPCQFMVPIL 120
               SR R   V +A+  T        S++D L+  +  PV+VDF+A WCGPC+ + P++
Sbjct: 61  QPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLV 120

Query: 121 EQVSATLIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQR 171
             ++     K++  K++T++ P    +Y + ++PT ++F  G+  D   GA+    L   
Sbjct: 121 NDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSS 180

The following BLAST results are available for this feature:

BLAST of HG10003630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884039.1	2.0e-83	95.98	thioredoxin-like protein slr0233 [Benincasa hispida]	[more]
XP_008463079.1	5.4e-76	89.66	PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >XP_016902975.1 PREDI...	[more]
XP_004138379.1	5.0e-74	88.51	uncharacterized protein LOC101213340 [Cucumis sativus]	[more]
XP_022974037.1	5.6e-73	87.36	thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxi...	[more]
XP_022152246.1	3.6e-72	86.86	thioredoxin Y2, chloroplastic-like [Momordica charantia]	[more]

BLAST of HG10003630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPF9	6.9e-50	63.37	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 ...	[more]
Q8L7S9	6.6e-45	58.99	Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 ...	[more]
Q5JMR9	5.8e-41	56.21	Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]
P52232	4.6e-30	59.41	Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
O30974	1.1e-18	44.12	Thioredoxin OS=Mycolicibacterium smegmatis OX=1772 GN=trxA PE=1 SV=1	[more]

BLAST of HG10003630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIC6	2.6e-76	89.66	thioredoxin-like protein slr0233 OS=Cucumis melo OX=3656 GN=LOC103501315 PE=4 SV...	[more]
A0A5D3BTP9	2.6e-76	89.66	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0K7X7	2.4e-74	88.51	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014850...	[more]
A0A6J1I964	2.7e-73	87.36	thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 P...	[more]
A0A6J1DH52	1.7e-72	86.86	thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC11102001...	[more]

BLAST of HG10003630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76760.1	4.9e-51	63.37	thioredoxin Y1	[more]
AT1G43560.1	4.7e-46	58.99	thioredoxin Y2	[more]
AT1G50320.1	3.5e-17	43.00	thioredoxin X	[more]
AT3G15360.1	1.1e-15	32.95	thioredoxin M-type 4	[more]
AT4G03520.1	5.3e-13	27.57	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 134..145 score: 35.93 coord: 94..103 score: 55.39 coord: 86..94 score: 64.32
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 53..173 e-value: 7.1E-33 score: 114.9
None	No IPR available	PANTHER	PTHR45663:SF15	THIOREDOXIN Y1, CHLOROPLASTIC	coord: 5..173
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 5..173
None	No IPR available	CDD	cd02947	TRX_family	coord: 73..167 e-value: 5.21789E-38 score: 123.822
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 70..167 e-value: 5.0E-29 score: 100.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 51..171 score: 16.830326
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 72..168 e-value: 1.4E-32 score: 109.9
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 87..105
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 71..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003630.1	HG10003630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity