HG10003611 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003611
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent RNA helicase, putative
Location	Chr08: 4115073 .. 4121784 (-)
RNA-Seq Expression	HG10003611
Synteny	HG10003611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAGATGAATCGGTTGGCTAGGAACTTTTTTTGGGATGGAGGTGTTAGGGATATCAATGAACCCTCCAAACATCTTCCTGATAGTATGATATTGTTCACTTAGGGCATAAGTCTTCATGGTTTTGCTTTTAGTTTCGCCCAAAAGGCCTCATACCAATATATAATTTTCCTCATTTATATACCCATGATCTTTCCCTTATTTAGCCAATGTGAGACTTTGGTTGCATTCTTAAGAGGTGGAAATTGTCCGTGTAATCATTTGGTGAACTGGAGAAAAATTTCACTCCCATTGGCTTTGCATTATGGGGGCCTCGGTTTCAGTTCATTGTATAGAAAGAAACTAAAGAATCTTTTTGGATAAAGAGAACACCTTTTAAGTGTTCTTTGACCTCGTTATTTATTTTGCTATTTCTTGGCGTAAATTGTCTAATCTCTTTACTTTTTATAGTTATGCTTACCTTTTAATCAATTGGAAAAGTCTTTTGTAATTCTCATGAATCTTTCATCCTTTTTGTGAACTTCATGCATCAATGAAATTATTTCGTATAAAAAAAACCAATATTTTTATTGTGGTTATACTTGATATACTAGAAAGGGTAAAGGCTGTAGAATTTTTTTGCATTACCAAGTTTTCAGTAATTGATTACAACGACCATATGTTTATTTAGATTTTTGGCTCCTGTAGGAATCGACAAGACAATGGAAAGTCAAGGAGTCGGTGCTAATTTCTCAACTAATGACTTTGTCATCAGGCATGCCACTTATATAGTTTTAACCCGATTTTTCATCATTGTTCTTCTACTTTGTTTATTTTTGGTTCTTTAAGACTAGAGGGATAATGAAAATAAAAAATATTAGTGTATACAACTTTGGCTTCTCATGTTTGGGTAGTACTTTTAGTTTTAATTCCGTGATTTTGGTTCTGATGTAGAAAGCGAAAACGAGAAATTGCAGAACAGAGAAAGTCACTCCCAATAGCATCTGGTATTGATTCAAATTCTTTTGGTTTTCTCTTTCAAGTTTTTCCCCATCACAATTGAAAGTTCTAAAATTTCTCTGAGTGTTGTCCCTTTTTCTTATGTGCTTAGTTGAGACAAGGTTCATCCAAGAGGTGCATGAAAATGATGTATTGATTGTTGTTGGTGAAACTGGAAGTGGAAAAACAACACGTGAGATTTTAACTTATTTTTCTAGACTGTTTTTTTAAATAAGTTATTATGCCAATCTAAACCATTTGTATTGAGTATTGACTATTTAACATTTTTATTGAAATATTTTAGAGATACCCCAGTTTCTTTTTAATGCTGGGTTTTGTCGACATGGAAAAGCTATTGGGGTAACCCAACCTCGACGACTTGCTGCCCTATCTGTAGCCAAACGAGTTGCTGAGGAATGTGGCGTCATGGTTGGTGATAAAGTTGGGTATTCCATTAGATTCGAGGATGTAACTTCTAGTTACACCAGAATAAAGTATATGACAGATGGTATACTACTGAGGTAAAATATAGAAACACCATAGGCTTCCTTTATGAAATGTCACTGCAATGAACTCCTAAATGAGTGTTTTGATTCAATTTATTTGTTTGAAAAGACTATACTACTTTTATTTTTATTTATTATAATTTTTTTAATTTACAACTATTTTTATTTCTTGTCTTTGTGTGTACATGGATGTGTGTGTACATATTTTGAAGGTGATACACGTTTCCCTGTTTCTTTTCCATGTAAGCTATCTGGAGATAATGGGTGATACATAAATTTGTTTAATGACAAATACATGGGATAGTTTCTTTATTAACATTATGCTTGTTTCTTCAAGGTTTAGAGAAGCTATGGTGACTGTGGATTTGGTAAAATGTATAACCTACCAATCATGTCGCTTTTATTAATTTTCAGGGAAGCATTGTTGGATCCTTATCTTTCCAGATATTCAGTTATCATTGTTGATGAAGCTCACGAAAGAACAGTTGATACTGATGTATTGCTAGGGTATTTGAAAAGAGTGCAGAAAGAAAGATCTAAATCTTTAAATGACTCTTTCAATGCTGTGAACATGACGTTAGAAAATAGAAATAGCAGTGAATATGTCAGTTCCTTAAAGAGATGTCAAGGAAGGAAACTACCTCCCCTGAAGTTAATTATCATGTCAGCCAGCTTAAATGCACCCCTTTTCTCTGAGTTCTTTGGTGGTGCAAAGGTATTCCATGTCCATGGGCGTCAGCATCCAGTAGCTATATTTTATGCTCGTCATCCAATACTAGATTACATTGAGGGCACTCTTATTACTATATTTCAGGTAGTTATTAATTTCTCACCTTGAATCTCCATATCCGATTGAATTCAAGATTTCTTTCATGTAAAATGTCTAGCTACTTTCTCATTTAAACATGTTTTCCTTGACTGCTATTTTTAAAGTATTGTTTCCTTAATCTAGTTTTATAGTTTGAAAGCTCCTTGTCTTAATTTGTTCTTACACAAATTTATTTAACAATTTCTATGTATCACCACATATATCTTGTCAATTAGATTCATCTAGAGGAGAGTCCTGGGGATGTACTTGCATTTTTGACTGGGCAAGAAGAGATAGAATCTATTGAAAATCTTGTCAAGGATGAGATTCAGAAGTTACCTGAAGAAAAACGGAATTTAGTAGTTATCCCTATATATTCAGCACTTCCATCTGAGCAACAACTACGAGTTTTTGCTCCAACTCCAAGTGGAGTTCGCAAGGTATTTTAACCACACACACATTGTATTTGATGAACTCATCATCCACTTTTTCCTTTTTCATTCTCTTCCCGTCATACATGATCATATTTGGTAGATTTCTTTTTTGTTTCATGTGTTAGAATTGATGATTCTAGTTTGTATAACTACCCCATTTCCCTCATTTAGTTTTTGGTTGACCATCTACCTACTTTTTAGGTGATATTGGCGACAAATATTGCTGAGACATCCTTGACAATTCCTGGAATCAAGTATGTTATTGATCCTGGATTTGTAAAAGCGCGCACCTACGATCCTAACAAAAGAATGGAATCTTTAACTATTGTTCGAACCTCAAAAGCGCAGGCACTACAAAGGAGGTAGCATGTTGGATGAAGCATGACTTCTATTATGAAATTTTGTTTAGGTTATAAGTTCAGCTAAATGGATTTGAACTTAATTAGTGTGTTCTATTGTTAATATTGTTGTGCTTCAGTGGACGTGCAGGTCGTGAAGGACCTGGAAAATGCTTTCGTCCGTATCCTGAGAATATGTTTTATAAATTTGAAGATTCAACGAAGCCAGAGATTAAGAGAAGCAACCTTTCTAATGTCATTTTACAATTGAAGGCTTTAGGTGTTGATAATATCATAGAGTTTGATTTCTTGGAAGAACCACCAAGGTGCAAAATTTTAAGAGTTTATTGCTTTGGATATAAAATTTGTATTTAAGCAAATTGTATGGTTCTTCTTTTCATGTGCGAGATTTATTTATAGATGTTGATTAAATGATAAATGAAAAGAAAAAAGAAGGAAAAGATAGATTTTTAGGGGTGGGGTTCAAGAGATGGAAAAGTGACCTTGATTCATATTTTCAACAGGCAGACTATTTTCAAGTCATTTGAGCAATTGATGTTGCTAGGAGCTTTAACAGGTGACGGAGAACTATCTAATCCAGTAGGACATCAAATGGCTCATCTTCCATTAGATCCAATATATTCTAAAGCTTTGATTGTTGCCAGTCAGTCCAATTGCTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCTGTGGAATCCATTTTTTACAACCCTCGAGAGAAGTTAGAAGAGGTCAGTCCATCAAATTATGTTGCTTCTATTTCTTTTCTGCATGCGACTATCATTTTCTTGCTAATAACTGATAAGAGGTGATAATTAGAAATATTGCCATGACGAAGTCTTATATTTAGCCTTCAATTTATCTTTACAGTAAAACTCCATATATTTCTTCTGTTTCCAGGCAAGAGCTAAAGTGAAATATTTTTCAAGTCCTGAAGGAGATCACCTCACTCTTATCAATGTTTATCGGTCTGCAGATGAATTTTTGAATAAGAAAAAGTTAGAACTTAATAAAAATAAAGTTGAGAAAAGCTTTAGAAGGTGGTGCAAGGAACATTTTATAAATTGCCGGTCTATTAGATATGCACGTGACGTTTACAGGTTAGCAATGCAATTTCTTGGTTTTTTGTTCACACTCCATTTTTGGTATAAATTCTATTTTAGTCTCTTAAATACCAGATATTCTGTTTTACCACTAGAACTTGAAGAAATTGGCACAAAAGGAAGAGAGAAAAACTTGGAAGAAAGAAACTTTATTAAGAAATGAGGACATAACTCCTATTTATAGGTTTGAGATCCTTGGGCCTAAGTATAAGGATCTTTCTAGGCCTTTCTTGGATTCTAAAGTAACTTAGATATTTCTACGACTGGATCCTTATCTAAAGGAATTCTGAAATTCATTGGATCCTAAAAAAATGTTAGGATGTCTGTAGATCATTTCTTTTGACATATTTATATACAATATGATAGAAATGGTATTAGAGAGATATTAAGGGTATATTAGTAAATAGTTAAGTAGTTTGTTAGGGAAGGTTGGTTATAAATATAGTGGGTAGGAAAGAAGGGGTTAAGGAATATTTTGGAATATGAAGTAGGGCTTGAGAGTATCTCAAGATTGGGAGGGTCCAAGTACCTCGAACACTTGGTTTATCTTGTATTTTCGTTATCGTTTATCTTTCAATATATTCGGGTTCTATAAAAAAAAAATTCAATTTGTATCCACACCTTGAGGACAAGGTGTGTTTTAGGGGCCGATAATGATAGGAATGGTATTAAAGACATATTAAGGTTATATTAGTAAATAGTTAAGTAGTTTGTTAGGGAAGGTTGGTTATAAATATAGTGGTGAAGAAATTGGCACAAAAGGAAGAAAGACAATTTCTTGGAAAGAAATTTTTATTATGAATGTACAAGGATGGACACTTAGAGAGAATACTCTTTTACACTCTCTAACACTCACTCACTTTTCTTCACTAACTCTCTAGCTTTTTGCTTTGCTTGGCTCACATATAGGGCGGCACCTCCTATTTATAGGCATGAGATCGTTTGAGCCCAAGCAAAAAGATGTATCTAGGTTGTTCTTGGATTCTAAAGATTCTAGACATTTCTTGGTTTATTCTTATCTAAAGGAACTCTCTAGAATTCCTTAAACCTAAAGAAAACCTAGCATAATTTTAGATCTTTACTTTTGTGGTGTTTATTTATAATTTACATATTTCAACATAATTCTAGAAAATCCTAATTTACACATTTATGTTATTTTGTTGATGCTTCAAGAACTCTCTAGATTAGTTAGTGTTGTTTTATATTTTAACATATAGTGGATAGGAAAGAAGGGGGTAGGGAATATTTTGGAATATGAAGTAGGGCTTGAGAGTATCTCAAGATTGGAAGGGTCTAAGTACCTCGAACACTTGGTTTATCTTGTATTTTCGTTATTGTTTATCTTTCAATATATTCGAGTTCTATCACCATCTTCTACATAAATATAGAGATGTCTAATATTTACACTTGAGCTATTTATATGAACACTTCAATAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATCCGTGAGTGTCTGGGCTAGCTTACGCGCACCTCAGCTAATCTCACGGAACAATTGGCCCAGCCCTACAATATTTTAGTGTCAAAGAAACTAATAGGAAATTAATTCCTAGGTAGGTAGTCACTATTAATTGAACCCCATGGCCTTTTAGCCATTTGTTGAGTCTGTCTCCCTTTTTACCATGATGATTTTAAGTTTCTAAGATAGTTAGCATTGCCTTTTAATAGAATTTTGGATGAAATATCTATCATTTGTCTCACATGAATTTCTTAATAAATTATTTAAAAAAACTTTATGGTTATACATTTTTTGTTTAATTGCCTAATGAATAGATGTTTACATGTACAGATGTTTGAAACTACATGCAATGAGTTATGTGTTGGAATTTTAAATAGATTTGAATTCTCGTGTCCATGGAAAATGTTAGCTTAAGCCAACAATTTATTTATCAACAATAAACAAGGGAGATTTGACGGCTCCCCACCTCTTCCAAATTCTCTAATCTGCATGTTGAAACATAAAATATACAAAAAGATACCTTCTTCTCAAAGATTCTTCTTCTATAAGATAACAGCCCTCCTTAACGTGGCCCTGACCGAACTACCAAAAATTATGGGCCCCACTCTAACAGACGGAAACTACCCTTCACAACCATCCCTTCTTCACATGCTTACGCTCACAAACTTCTGTGAGTAGGGAGGGGTGTATTAGAAAACTAATGATTGTGCAAATTGGAGGGATGACGATACAACAATTGAAAGATGAAAAACTGAATAAAATATTTGACAATTTATAAACCAATTGGAATGAAGTCCAGGAACTAAATATAAGATTTCAATCCTAATACATTGTTCAGTGAGCATTTTTAATCTTTTCAAGCTTCTTTTATTGCAGTCAAATCACGAGGCAGGTTGAACAAATGCGCCTTCCTCTACACTCTTGTGGAGATGACATTCTTCAGTTCCGTAGATGCCTTGCTGCTTCCTTTTTTCTCAATGCAGCCACAAAGCAGCCCGATGGAATATACAGGCATTAG

mRNA sequence

ATGAATGAGATGAATCGGTTGGCTAGGAACTTTTTTTGGGATGGAGGTGTTAGGGATATCAATGAACCCTCCAAACATCTTCCTGATATTGAGACAAGGTTCATCCAAGAGGTGCATGAAAATGATGTATTGATTGTTGTTGGTGAAACTGGAAGTGGAAAAACAACACAGATACCCCAGTTTCTTTTTAATGCTGGGTTTTGTCGACATGGAAAAGCTATTGGGGTAACCCAACCTCGACGACTTGCTGCCCTATCTGTAGCCAAACGAGTTGCTGAGGAATGTGGCGTCATGGTTGGTGATAAAGTTGGGTATTCCATTAGATTCGAGGATGTAACTTCTAGTTACACCAGAATAAAGTATATGACAGATGGTATACTACTGAGGGAAGCATTGTTGGATCCTTATCTTTCCAGATATTCAGTTATCATTGTTGATGAAGCTCACGAAAGAACAGTTGATACTGATGTATTGCTAGGGTATTTGAAAAGAGTGCAGAAAGAAAGATCTAAATCTTTAAATGACTCTTTCAATGCTGTGAACATGACGTTAGAAAATAGAAATAGCAGTGAATATGTCAGTTCCTTAAAGAGATGTCAAGGAAGGAAACTACCTCCCCTGAAGTTAATTATCATGTCAGCCAGCTTAAATGCACCCCTTTTCTCTGAGTTCTTTGGTGGTGCAAAGGTATTCCATGTCCATGGGCGTCAGCATCCAGTAGCTATATTTTATGCTCGTCATCCAATACTAGATTACATTGAGGGCACTCTTATTACTATATTTCAGATTCATCTAGAGGAGAGTCCTGGGGATGTACTTGCATTTTTGACTGGGCAAGAAGAGATAGAATCTATTGAAAATCTTGTCAAGGATGAGATTCAGAAGTTACCTGAAGAAAAACGGAATTTAGTAGTTATCCCTATATATTCAGCACTTCCATCTGAGCAACAACTACGAGTTTTTGCTCCAACTCCAAGTGGAGTTCGCAAGGTGATATTGGCGACAAATATTGCTGAGACATCCTTGACAATTCCTGGAATCAAGTATGTTATTGATCCTGGATTTGTAAAAGCGCGCACCTACGATCCTAACAAAAGAATGGAATCTTTAACTATTGTTCGAACCTCAAAAGCGCAGGCACTACAAAGGAGTGGACGTGCAGGTCGTGAAGGACCTGGAAAATGCTTTCGTCCGTATCCTGAGAATATGTTTTATAAATTTGAAGATTCAACGAAGCCAGAGATTAAGAGAAGCAACCTTTCTAATGTCATTTTACAATTGAAGGCTTTAGGTGTTGATAATATCATAGAGTTTGATTTCTTGGAAGAACCACCAAGGCAGACTATTTTCAAGTCATTTGAGCAATTGATGTTGCTAGGAGCTTTAACAGGTGACGGAGAACTATCTAATCCAGTAGGACATCAAATGGCTCATCTTCCATTAGATCCAATATATTCTAAAGCTTTGATTGTTGCCAGTCAGTCCAATTGCTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCTGTGGAATCCATTTTTTACAACCCTCGAGAGAAGTTAGAAGAGGCAAGAGCTAAAGTGAAATATTTTTCAAGTCCTGAAGGAGATCACCTCACTCTTATCAATGTTTATCGGTCTGCAGATGAATTTTTGAATAAGAAAAAGTTAGAACTTAATAAAAATAAAGTTGAGAAAAGCTTTAGAAGGTGGTGCAAGGAACATTTTATAAATTGCCGGTCTATTAGATATGCACGTGACGTTTACAGTCAAATCACGAGGCAGGTTGAACAAATGCGCCTTCCTCTACACTCTTGTGGAGATGACATTCTTCAGTTCCGTAGATGCCTTGCTGCTTCCTTTTTTCTCAATGCAGCCACAAAGCAGCCCGATGGAATATACAGGCATTAG

Coding sequence (CDS)

ATGAATGAGATGAATCGGTTGGCTAGGAACTTTTTTTGGGATGGAGGTGTTAGGGATATCAATGAACCCTCCAAACATCTTCCTGATATTGAGACAAGGTTCATCCAAGAGGTGCATGAAAATGATGTATTGATTGTTGTTGGTGAAACTGGAAGTGGAAAAACAACACAGATACCCCAGTTTCTTTTTAATGCTGGGTTTTGTCGACATGGAAAAGCTATTGGGGTAACCCAACCTCGACGACTTGCTGCCCTATCTGTAGCCAAACGAGTTGCTGAGGAATGTGGCGTCATGGTTGGTGATAAAGTTGGGTATTCCATTAGATTCGAGGATGTAACTTCTAGTTACACCAGAATAAAGTATATGACAGATGGTATACTACTGAGGGAAGCATTGTTGGATCCTTATCTTTCCAGATATTCAGTTATCATTGTTGATGAAGCTCACGAAAGAACAGTTGATACTGATGTATTGCTAGGGTATTTGAAAAGAGTGCAGAAAGAAAGATCTAAATCTTTAAATGACTCTTTCAATGCTGTGAACATGACGTTAGAAAATAGAAATAGCAGTGAATATGTCAGTTCCTTAAAGAGATGTCAAGGAAGGAAACTACCTCCCCTGAAGTTAATTATCATGTCAGCCAGCTTAAATGCACCCCTTTTCTCTGAGTTCTTTGGTGGTGCAAAGGTATTCCATGTCCATGGGCGTCAGCATCCAGTAGCTATATTTTATGCTCGTCATCCAATACTAGATTACATTGAGGGCACTCTTATTACTATATTTCAGATTCATCTAGAGGAGAGTCCTGGGGATGTACTTGCATTTTTGACTGGGCAAGAAGAGATAGAATCTATTGAAAATCTTGTCAAGGATGAGATTCAGAAGTTACCTGAAGAAAAACGGAATTTAGTAGTTATCCCTATATATTCAGCACTTCCATCTGAGCAACAACTACGAGTTTTTGCTCCAACTCCAAGTGGAGTTCGCAAGGTGATATTGGCGACAAATATTGCTGAGACATCCTTGACAATTCCTGGAATCAAGTATGTTATTGATCCTGGATTTGTAAAAGCGCGCACCTACGATCCTAACAAAAGAATGGAATCTTTAACTATTGTTCGAACCTCAAAAGCGCAGGCACTACAAAGGAGTGGACGTGCAGGTCGTGAAGGACCTGGAAAATGCTTTCGTCCGTATCCTGAGAATATGTTTTATAAATTTGAAGATTCAACGAAGCCAGAGATTAAGAGAAGCAACCTTTCTAATGTCATTTTACAATTGAAGGCTTTAGGTGTTGATAATATCATAGAGTTTGATTTCTTGGAAGAACCACCAAGGCAGACTATTTTCAAGTCATTTGAGCAATTGATGTTGCTAGGAGCTTTAACAGGTGACGGAGAACTATCTAATCCAGTAGGACATCAAATGGCTCATCTTCCATTAGATCCAATATATTCTAAAGCTTTGATTGTTGCCAGTCAGTCCAATTGCTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCTGTGGAATCCATTTTTTACAACCCTCGAGAGAAGTTAGAAGAGGCAAGAGCTAAAGTGAAATATTTTTCAAGTCCTGAAGGAGATCACCTCACTCTTATCAATGTTTATCGGTCTGCAGATGAATTTTTGAATAAGAAAAAGTTAGAACTTAATAAAAATAAAGTTGAGAAAAGCTTTAGAAGGTGGTGCAAGGAACATTTTATAAATTGCCGGTCTATTAGATATGCACGTGACGTTTACAGTCAAATCACGAGGCAGGTTGAACAAATGCGCCTTCCTCTACACTCTTGTGGAGATGACATTCTTCAGTTCCGTAGATGCCTTGCTGCTTCCTTTTTTCTCAATGCAGCCACAAAGCAGCCCGATGGAATATACAGGCATTAG

Protein sequence

MNEMNRLARNFFWDGGVRDINEPSKHLPDIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKALGVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFRRCLAASFFLNAATKQPDGIYRH

Homology

[Close]

BLAST of HG10003611 vs. NCBI nr
Match: XP_022932160.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita moschata] >XP_022932161.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita moschata])

HSP 1 Score: 993.4 bits (2567), Expect = 8.9e-286
Identity = 507/625 (81.12%), Postives = 554/625 (88.64%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNM-----TLENRNSS 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS NA NM      +EN N+ 
Sbjct: 144 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNG 203

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +Y SSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R  + 
Sbjct: 204 KYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVS 263

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVIPIYS
Sbjct: 264 DYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYS 323

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 324 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 383

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQLKAL
Sbjct: 384 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKAL 443

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYSKALI
Sbjct: 444 GVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALI 503

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+E
Sbjct: 504 VAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEE 563

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
           FLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSCGDD 
Sbjct: 564 FLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDT 623

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           +QF RCLAASFFLN ATKQPDG YR
Sbjct: 624 IQFCRCLAASFFLNVATKQPDGTYR 648

[Close]

BLAST of HG10003611 vs. NCBI nr
Match: KAG6577426.1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 991.9 bits (2563), Expect = 2.6e-285
Identity = 507/625 (81.12%), Postives = 553/625 (88.48%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 34  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 93

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 94  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 153

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNM-----TLENRNSS 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS NA NM      +EN N+ 
Sbjct: 154 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNG 213

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +Y SSL + +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R  + 
Sbjct: 214 KYASSLGQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVS 273

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVIPIYS
Sbjct: 274 DYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYS 333

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 334 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 393

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQLKAL
Sbjct: 394 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKAL 453

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYSKALI
Sbjct: 454 GVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALI 513

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+E
Sbjct: 514 VAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEE 573

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
           FLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSCGDD 
Sbjct: 574 FLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDT 633

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           +QF RCLAASFFLN ATKQPDG YR
Sbjct: 634 IQFCRCLAASFFLNVATKQPDGTYR 658

[Close]

BLAST of HG10003611 vs. NCBI nr
Match: XP_023520426.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita pepo subsp. pepo] >XP_023520427.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 989.9 bits (2558), Expect = 9.8e-285
Identity = 506/625 (80.96%), Postives = 553/625 (88.48%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNM-----TLENRNSS 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS NA NM      +EN N+ 
Sbjct: 144 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNG 203

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +  SSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R  + 
Sbjct: 204 KCASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVS 263

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVIPIYS
Sbjct: 264 DYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYS 323

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 324 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 383

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQLKAL
Sbjct: 384 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKAL 443

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYSKALI
Sbjct: 444 GVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALI 503

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+E
Sbjct: 504 VAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEE 563

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
           FLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSCGDD 
Sbjct: 564 FLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDT 623

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           +QF RCLAASFFLN ATKQPDG YR
Sbjct: 624 IQFCRCLAASFFLNVATKQPDGTYR 648

[Close]

BLAST of HG10003611 vs. NCBI nr
Match: XP_038904722.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X2 [Benincasa hispida])

HSP 1 Score: 988.8 bits (2555), Expect = 2.2e-284
Identity = 506/625 (80.96%), Postives = 553/625 (88.48%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND LI+VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVENLLIQEVHRNDTLIIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRVAEECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNM-----TLENRNSS 197
           YLSRYSVIIVDEAHERTV+TDVLLG+LK VQK RS+SLN+SFN  NM      LE+ N+ 
Sbjct: 144 YLSRYSVIIVDEAHERTVNTDVLLGFLKEVQKTRSRSLNNSFNTENMNSNGLVLESGNNG 203

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +YVSSL++ +GRKLPPLKLIIMSASLNA LFSE+FGGA+ F V GRQ+PVAIFY R  + 
Sbjct: 204 KYVSSLRQYRGRKLPPLKLIIMSASLNARLFSEYFGGARAFRVQGRQYPVAIFYTRKHVS 263

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE KRNLVVIPIYS
Sbjct: 264 DYSEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKRNLVVIPIYS 323

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 324 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 383

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQLKAL
Sbjct: 384 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKAL 443

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVD++ EFDFLE+PPRQ I+KS EQL+ LGA+  DG+LS+PVGHQMA +PLDP+YSKALI
Sbjct: 444 GVDDVTEFDFLEQPPRQAIYKSLEQLISLGAIAHDGKLSDPVGHQMARIPLDPVYSKALI 503

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VASQ NCLEEMLI VSMLSVESIFY+PREKLEEARAK+K FSSPEGDHLTLINVYRSA+E
Sbjct: 504 VASQFNCLEEMLIIVSMLSVESIFYHPREKLEEARAKMKCFSSPEGDHLTLINVYRSAEE 563

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
            L+KKKLEL+K K+EKS R+WCKE+FIN RS+R+ARD++SQI   VEQM LPLHSCGDD 
Sbjct: 564 ILDKKKLELSKEKLEKSLRKWCKENFINSRSLRHARDIHSQIRGHVEQMGLPLHSCGDDK 623

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           LQF RCLAASFFLN ATKQPDG YR
Sbjct: 624 LQFCRCLAASFFLNVATKQPDGTYR 648

[Close]

BLAST of HG10003611 vs. NCBI nr
Match: XP_022985184.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita maxima] >XP_022985185.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita maxima])

HSP 1 Score: 988.0 bits (2553), Expect = 3.7e-284
Identity = 505/629 (80.29%), Postives = 553/629 (87.92%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFN---------AVNMTLEN 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS N         A  + +EN
Sbjct: 144 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNDSLNAENMHANGLVVEN 203

Query: 198 RNSSEYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYAR 257
            N+ +Y SSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R
Sbjct: 204 GNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTR 263

Query: 258 HPILDYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVI 317
             + DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVI
Sbjct: 264 KHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVI 323

Query: 318 PIYSALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKR 377
           PIYSALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK 
Sbjct: 324 PIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKG 383

Query: 378 MESLTIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQ 437
           MESL +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQ
Sbjct: 384 MESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQ 443

Query: 438 LKALGVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYS 497
           LKALGVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYS
Sbjct: 444 LKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYS 503

Query: 498 KALIVASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYR 557
           KALIVA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYR
Sbjct: 504 KALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYR 563

Query: 558 SADEFLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSC 617
           SA+EFLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSC
Sbjct: 564 SAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSC 623

Query: 618 GDDILQFRRCLAASFFLNAATKQPDGIYR 636
           GDD +QF RCLAASFFLN ATKQPDG YR
Sbjct: 624 GDDTIQFCRCLAASFFLNVATKQPDGTYR 652

[Close]

BLAST of HG10003611 vs. ExPASy Swiss-Prot
Match: F4IE66 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Arabidopsis thaliana OX=3702 GN=RID1 PE=1 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 1.1e-233
Identity = 402/624 (64.42%), Postives = 499/624 (79.97%), Query Frame = 0


Query: 20  INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
           I E  + LP   +E R ++EV +ND+LI+VGETGSGKTTQ+PQFL+NAGFCR GK IG+T
Sbjct: 34  IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 93

Query: 80  QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
           QPRR+AA++VAKRVAEEC V +G KVGYSIRF+D TS  TR+KYMTDG+LLREALLDP+L
Sbjct: 94  QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 153

Query: 140 SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDS------FNAVNMTLENRNSSE 199
           SRYSVIIVDEAH+R+V TDVLL  LK++Q+ RS+ +++        + V  T  + N  +
Sbjct: 154 SRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQ 213

Query: 200 YVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILD 259
               LK  QGRKL PLKLIIMSASL+A +FSE+FGGAK  HV GRQ PV I Y  HP  D
Sbjct: 214 QNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESD 273

Query: 260 YIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSA 319
           Y++ TL+TIFQIH EE PGD+L FLTGQ+EIES+E LV++ +Q +PE+KR L+ + I+SA
Sbjct: 274 YVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSA 333

Query: 320 LPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLT 379
           LPSEQQ++VFAP P+G RKVILATNIAETS+TIPGI+YVIDPGFVKAR+YDP+K MESL 
Sbjct: 334 LPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLD 393

Query: 380 IVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKALG 439
           +V  SKAQ LQRSGRAGREGPGK FR YPE  F K EDSTKPEIKR NLSN+ILQLKALG
Sbjct: 394 VVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALG 453

Query: 440 VDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIV 499
           +D+I+ FDF+++P R  I K+  +L  LGAL  DG+L NPVG+QM+ LPL+P+YSKALI+
Sbjct: 454 IDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALIL 513

Query: 500 ASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEF 559
           A+Q NCLEEMLITV++LSVESIFY+PREK EEAR    +F+S EGDHLT ++VYR +DEF
Sbjct: 514 ANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEF 573

Query: 560 LNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDIL 619
           L K+K   + N ++K  ++WCKE+++N RS+++ARD+Y QI   VEQ+   + SCG+D+L
Sbjct: 574 LEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDML 633

Query: 620 QFRRCLAASFFLNAATKQPDGIYR 636
            FRRCLAASFFL AA +Q DG YR
Sbjct: 634 AFRRCLAASFFLKAAQRQLDGTYR 657

[Close]

BLAST of HG10003611 vs. ExPASy Swiss-Prot
Match: Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 7.3e-150
Identity = 290/621 (46.70%), Postives = 396/621 (63.77%), Query Frame = 0


Query: 18   RDINEPSKHLPDIETR--FIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
            R I E  + LP    R  F+Q V E+ +L+V+GETGSGKTTQ+ Q+L  AG+   GK IG
Sbjct: 499  RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGK-IG 558

Query: 78   VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
             TQPRR+AA+SV+KRVAEE G  +G +VGY+IRFED TS  T IK+MTDGILLRE LLDP
Sbjct: 559  CTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 618

Query: 138  YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSS 197
             LS YSVII+DEAHERT+ TDVL G LK+  + R                          
Sbjct: 619  NLSAYSVIILDEAHERTISTDVLFGLLKQALQRR-------------------------- 678

Query: 198  LKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEG 257
                     P LK++I SA+L A  FS++F  A++F + GR  PV I Y + P  DY++ 
Sbjct: 679  ---------PELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDA 738

Query: 258  TLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSE 317
            +LIT+ QIHL E PGD+L FLTGQEEI++   ++ + ++ L     +L+++P+YSALPSE
Sbjct: 739  SLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSE 798

Query: 318  QQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRT 377
             Q ++F P P G RKV++ATNIAETSLTI GI YVIDPGF K + ++P   M+SL +   
Sbjct: 799  MQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPI 858

Query: 378  SKAQALQRSGRAGREGPGKCFRPYPENMF-YKFEDSTKPEIKRSNLSNVILQLKALGVDN 437
            S+A A QRSGRAGR GPGKC+R Y E+ F  +   S+ PEI+R+NL N +L +KA+G+++
Sbjct: 859  SQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGIND 918

Query: 438  IIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQ 497
            ++ FDF++ PP QT+  + EQL  LGAL  +G L+  +G +MA  PLDP  SK LI +  
Sbjct: 919  LLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLIASVD 978

Query: 498  SNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNK 557
              C +E+L  V+MLSV+++FY P+EK   A  K   F  PEGDHLTL+NVY S       
Sbjct: 979  LGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESW------ 1038

Query: 558  KKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFR 617
                    K  K    WC E+F+  RS+R A+DV  Q+   +++ +L + S G +  + +
Sbjct: 1039 --------KNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQ 1068

Query: 618  RCLAASFFLNAATKQPDGIYR 636
            + + + FF NA+ K P+  Y+
Sbjct: 1099 KAICSGFFANASKKDPNEGYK 1068

[Close]

BLAST of HG10003611 vs. ExPASy Swiss-Prot
Match: Q14562 (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.1e-148
Identity = 281/619 (45.40%), Postives = 397/619 (64.14%), Query Frame = 0


Query: 20   INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
            I E  + LP   ++ + +Q VH+N +LIV+GETGSGKTTQI Q+L  AG+   GK IG T
Sbjct: 558  ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 617

Query: 80   QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
            QPRR+AA+SVAKRV+EE G  +G +VGY+IRFED TS  T IKYMTDG+LLRE L+DP L
Sbjct: 618  QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 677

Query: 140  SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLK 199
            ++Y++I++DEAHERT+ TDVL G LK+  ++R                            
Sbjct: 678  TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ--------------------------- 737

Query: 200  RCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTL 259
                     +KLI+ SA+L+A  FS++F  A +F + GR +PV I Y + P  DY++ +L
Sbjct: 738  --------DMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL 797

Query: 260  ITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQ 319
            IT+ QIHL E PGD+L FLTGQEEI++   ++ + ++ L  +   L+++P+YSALPSE Q
Sbjct: 798  ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 857

Query: 320  LRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSK 379
             R+F P P G RKV++ATNIAETSLTI GI YV+DPGFVK + Y+    ++ L +   S+
Sbjct: 858  TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 917

Query: 380  AQALQRSGRAGREGPGKCFRPYPENMFY-KFEDSTKPEIKRSNLSNVILQLKALGVDNII 439
            AQA QR+GRAGR GPGKC+R Y E  +  +   +  PEI+R+NL++ +L LKA+G+++++
Sbjct: 918  AQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLL 977

Query: 440  EFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSN 499
             FDF++ PP +T+  + EQL  LGAL  +G L+  +G +MA  PL+P+  K LI++    
Sbjct: 978  SFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLG 1037

Query: 500  CLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKK 559
            C EEML  VSMLSV+++FY P++K   A  K   F   EGDHLTL+ VY           
Sbjct: 1038 CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVY----------- 1097

Query: 560  LELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFRRC 619
               N  K  K    WC E+FI  RS+R A+D+  Q+   +++ +L + SCG   ++ ++ 
Sbjct: 1098 ---NSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKA 1125

Query: 620  LAASFFLNAATKQPDGIYR 636
            + + FF NAA K P   YR
Sbjct: 1158 ICSGFFRNAAKKDPQEGYR 1125

[Close]

BLAST of HG10003611 vs. ExPASy Swiss-Prot
Match: A2A4P0 (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.1e-148
Identity = 281/619 (45.40%), Postives = 397/619 (64.14%), Query Frame = 0


Query: 20   INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
            I E  + LP   ++ + +Q VH+N +LIV+GETGSGKTTQI Q+L  AG+   GK IG T
Sbjct: 582  ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 641

Query: 80   QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
            QPRR+AA+SVAKRV+EE G  +G +VGY+IRFED TS  T IKYMTDG+LLRE L+DP L
Sbjct: 642  QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 701

Query: 140  SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLK 199
            ++Y++I++DEAHERT+ TDVL G LK+  ++R                            
Sbjct: 702  TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ--------------------------- 761

Query: 200  RCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTL 259
                     +KLI+ SA+L+A  FS++F  A +F + GR +PV I Y + P  DY++ +L
Sbjct: 762  --------DMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL 821

Query: 260  ITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQ 319
            IT+ QIHL E PGD+L FLTGQEEI++   ++ + ++ L  +   L+++P+YSALPSE Q
Sbjct: 822  ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 881

Query: 320  LRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSK 379
             R+F P P G RKV++ATNIAETSLTI GI YV+DPGFVK + Y+    ++ L +   S+
Sbjct: 882  TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 941

Query: 380  AQALQRSGRAGREGPGKCFRPYPENMFY-KFEDSTKPEIKRSNLSNVILQLKALGVDNII 439
            AQA QR+GRAGR GPGKC+R Y E  +  +   +  PEI+R+NL++ +L LKA+G+++++
Sbjct: 942  AQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLL 1001

Query: 440  EFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSN 499
             FDF++ PP +T+  + EQL  LGAL  +G L+  +G +MA  PL+P+  K LI++    
Sbjct: 1002 SFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLG 1061

Query: 500  CLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKK 559
            C EEML  VSMLSV+++FY P++K   A  K   F   EGDHLTL+ VY           
Sbjct: 1062 CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVY----------- 1121

Query: 560  LELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFRRC 619
               N  K  K    WC E+FI  RS+R A+D+  Q+   +++ +L + SCG   ++ ++ 
Sbjct: 1122 ---NSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKA 1149

Query: 620  LAASFFLNAATKQPDGIYR 636
            + + FF NAA K P   YR
Sbjct: 1182 ICSGFFRNAAKKDPQEGYR 1149

[Close]

BLAST of HG10003611 vs. ExPASy Swiss-Prot
Match: O42643 (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp22 PE=1 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 4.0e-148
Identity = 289/620 (46.61%), Postives = 391/620 (63.06%), Query Frame = 0


Query: 20   INEPSKHLPDIETR--FIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
            + E  + LP  + R  F++ V +N +L+++GETGSGKTTQI Q+L   G+    K IG T
Sbjct: 503  MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562

Query: 80   QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
            QPRR+AA+SVAKRVAEE G  VG++VGY+IRFED TS  T+IKYMTDG+L RE L+DP L
Sbjct: 563  QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622

Query: 140  SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLK 199
            S+YSVII+DEAHERTV TDVL G LK                              + LK
Sbjct: 623  SKYSVIILDEAHERTVATDVLFGLLKG-----------------------------TVLK 682

Query: 200  RCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTL 259
            R      P LKLI+ SA+L+A  FS +F    +F + GR +PV I Y + P  DY++  L
Sbjct: 683  R------PDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAAL 742

Query: 260  ITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQ 319
            +T+ QIHL E PGD+L FLTGQEEI++   ++ +  + L +    LV++P+YSALPSE Q
Sbjct: 743  MTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQ 802

Query: 320  LRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSK 379
             R+F P P G RKV++ATNIAETSLTI GI YV+DPGFVK   +DP   M+SL +   S+
Sbjct: 803  SRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 862

Query: 380  AQALQRSGRAGREGPGKCFRPYPENMF-YKFEDSTKPEIKRSNLSNVILQLKALGVDNII 439
            AQA QRSGRAGR GPGKC+R Y E+ +  +   S  PEI+R NLS+ IL LKA+G+++++
Sbjct: 863  AQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLL 922

Query: 440  EFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSN 499
             FDF++ PP QT+  + + L  L AL  +G L  P+G +MA  P++P  SK LI + +  
Sbjct: 923  NFDFMDPPPAQTMIAALQNLYALSALDDEG-LLTPLGRKMADFPMEPQLSKVLITSVELG 982

Query: 500  CLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKK 559
            C EEML  ++MLSV +I+  PREK +EA  +   F++PE DHLTL+NVY +         
Sbjct: 983  CSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTW-------- 1042

Query: 560  LELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFRRC 619
                  K+ +    WC EH+I  R +R A DV  Q+ R +++ R P+ SCG       R 
Sbjct: 1043 ------KMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRA 1072

Query: 620  LAASFFLNAATKQP-DGIYR 636
            L + +F N A +   +G Y+
Sbjct: 1103 LCSGYFTNVAKRDSHEGCYK 1072

[Close]

BLAST of HG10003611 vs. ExPASy TrEMBL
Match: A0A6J1EVL1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita moschata OX=3662 GN=LOC111438478 PE=4 SV=1)

HSP 1 Score: 993.4 bits (2567), Expect = 4.3e-286
Identity = 507/625 (81.12%), Postives = 554/625 (88.64%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNM-----TLENRNSS 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS NA NM      +EN N+ 
Sbjct: 144 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNG 203

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +Y SSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R  + 
Sbjct: 204 KYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVS 263

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVIPIYS
Sbjct: 264 DYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYS 323

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 324 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 383

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQLKAL
Sbjct: 384 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKAL 443

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYSKALI
Sbjct: 444 GVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALI 503

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYRSA+E
Sbjct: 504 VAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEE 563

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
           FLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSCGDD 
Sbjct: 564 FLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDT 623

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           +QF RCLAASFFLN ATKQPDG YR
Sbjct: 624 IQFCRCLAASFFLNVATKQPDGTYR 648

[Close]

BLAST of HG10003611 vs. ExPASy TrEMBL
Match: A0A6J1JAN7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita maxima OX=3661 GN=LOC111483262 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 1.8e-284
Identity = 505/629 (80.29%), Postives = 553/629 (87.92%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R I E  K LP   +E   IQEVH ND L++VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRV+EECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFN---------AVNMTLEN 197
           +LSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDS N         A  + +EN
Sbjct: 144 FLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNDSLNAENMHANGLVVEN 203

Query: 198 RNSSEYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYAR 257
            N+ +Y SSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+   V GRQHPVAIFY R
Sbjct: 204 GNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTR 263

Query: 258 HPILDYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVI 317
             + DY+E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL KD+IQKLPE K+N+VVI
Sbjct: 264 KHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVI 323

Query: 318 PIYSALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKR 377
           PIYSALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK 
Sbjct: 324 PIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKG 383

Query: 378 MESLTIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQ 437
           MESL +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQ
Sbjct: 384 MESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQ 443

Query: 438 LKALGVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYS 497
           LKALGVDNI+EFDFLEEPPRQ IFKS EQL+LLGA+  DG+LSNPVGH MA +PLDPIYS
Sbjct: 444 LKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYS 503

Query: 498 KALIVASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYR 557
           KALIVA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSS EGDHLTLINVYR
Sbjct: 504 KALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYR 563

Query: 558 SADEFLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSC 617
           SA+EFLNKKKLEL+K KVEKS ++WCKE+FIN RS+R+ARDV+SQI   VEQM LPLHSC
Sbjct: 564 SAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSC 623

Query: 618 GDDILQFRRCLAASFFLNAATKQPDGIYR 636
           GDD +QF RCLAASFFLN ATKQPDG YR
Sbjct: 624 GDDTIQFCRCLAASFFLNVATKQPDGTYR 652

[Close]

BLAST of HG10003611 vs. ExPASy TrEMBL
Match: A0A1S3CJ82 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucumis melo OX=3656 GN=LOC103501587 PE=4 SV=1)

HSP 1 Score: 981.5 bits (2536), Expect = 1.7e-282
Identity = 504/625 (80.64%), Postives = 551/625 (88.16%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R + E  K LP   +E   IQEV  ND LI+VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKLAEHRKSLPVASVENLLIQEVLRNDTLIIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRVAEECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVN-----MTLENRNSS 197
           YLSRYSVIIVDEAHERTV TDVLLG+LK+VQK RS+SLNDSFN  N     + LE  N+ 
Sbjct: 144 YLSRYSVIIVDEAHERTVHTDVLLGFLKKVQKTRSRSLNDSFNTENVNTNGLVLEKGNNG 203

Query: 198 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 257
           +YVSSL++ +GRKLPPLKLIIMSASL+A LFSE+FGGA+ F + GRQ+PVAI Y R  +L
Sbjct: 204 KYVSSLRQHRGRKLPPLKLIIMSASLDARLFSEYFGGARAFRIPGRQYPVAISYTRKHVL 263

Query: 258 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 317
           DY E TLITIFQIHLEESPGD+LAFLTGQEEIESIENL K+ IQKLPE KRNLVVIPIYS
Sbjct: 264 DYSETTLITIFQIHLEESPGDILAFLTGQEEIESIENLAKETIQKLPESKRNLVVIPIYS 323

Query: 318 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 377
           ALPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL
Sbjct: 324 ALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESL 383

Query: 378 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 437
            +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQL AL
Sbjct: 384 IVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLTAL 443

Query: 438 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 497
           GVDN+ EFDFLE PPRQ IFKS EQL+LLGA+  DG+LS+PVGHQMA +PLDPIYSKALI
Sbjct: 444 GVDNVAEFDFLEAPPRQAIFKSLEQLILLGAIANDGKLSDPVGHQMARIPLDPIYSKALI 503

Query: 498 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 557
           VASQSNCLEEMLITVSMLSVESIFY+PREK EEARAK+K FSSPEGDHLTLINVYRSA +
Sbjct: 504 VASQSNCLEEMLITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLINVYRSAVD 563

Query: 558 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 617
           FLNKKKLELNK+K+EKS R+WCKE+FIN RS+R+ARD++SQI   VE+M LPL+SCGDD+
Sbjct: 564 FLNKKKLELNKDKLEKSLRKWCKENFINSRSLRHARDIHSQIRGHVERMGLPLNSCGDDM 623

Query: 618 LQFRRCLAASFFLNAATKQPDGIYR 636
           LQF RCLA SFFLN ATKQPDG YR
Sbjct: 624 LQFCRCLAGSFFLNVATKQPDGTYR 648

[Close]

BLAST of HG10003611 vs. ExPASy TrEMBL
Match: A0A0A0L7N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077650 PE=4 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 5.4e-281
Identity = 504/626 (80.51%), Postives = 551/626 (88.02%), Query Frame = 0


Query: 18  RDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIG 77
           R + E  K LP   +E+  +QEV  ND LI+VGETGSGKTTQIPQFLFNAGFCR GKAIG
Sbjct: 24  RKLAEHRKSLPVASVESSLMQEVLRNDTLIIVGETGSGKTTQIPQFLFNAGFCRDGKAIG 83

Query: 78  VTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDP 137
           VTQPRR+AA++VAKRVAEECGV VG KVGYSIRFEDVTSS TRIKYMTDG+LLREALLDP
Sbjct: 84  VTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDP 143

Query: 138 YLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMT----LENRNSSE 197
           YLSRYSVIIVDEAHERTV+TDVLLG+LK+VQK RS+SLNDSFN  NM     LE  N+ +
Sbjct: 144 YLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSFNTENMNTNGKLEKGNNGK 203

Query: 198 YVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILD 257
           YVSSL++ +GRKL PLKLIIMSASL+A LFSE+FGGAK F V GRQ+PVAI Y R  +LD
Sbjct: 204 YVSSLRQHRGRKLHPLKLIIMSASLDARLFSEYFGGAKAFRVQGRQYPVAISYTRKHVLD 263

Query: 258 YIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSA 317
           Y E TLITIFQIHLEESPGD+LAFLTGQ+EIESIE L K+ IQKLPE KRNLVVIPIYSA
Sbjct: 264 YTEATLITIFQIHLEESPGDILAFLTGQDEIESIETLAKETIQKLPESKRNLVVIPIYSA 323

Query: 318 LPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLT 377
           LPSEQQLRVFAPTP GVRKVILATNIAETS+TIPGIKYVIDPGFVKARTYDPNK MESL 
Sbjct: 324 LPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLI 383

Query: 378 IVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKALG 437
           +  TSKAQALQRSGRAGREGPGKCFR YPE+MFYK EDSTKPEIKR NLSNVILQL ALG
Sbjct: 384 VFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLTALG 443

Query: 438 VDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDG--ELSNPVGHQMAHLPLDPIYSKAL 497
           VDN+ EFDFLE PPRQ IFKS EQL+LLGA+T DG  +LS+PVGHQMA +PLDPIYSKAL
Sbjct: 444 VDNVTEFDFLEAPPRQAIFKSLEQLILLGAITNDGKLKLSDPVGHQMARIPLDPIYSKAL 503

Query: 498 IVASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSAD 557
           IVASQ NCLEEMLITVSMLSVESIFY+PREK EEARAK+K FSSPEGDHLTLINVYRSA 
Sbjct: 504 IVASQFNCLEEMLITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLINVYRSAV 563

Query: 558 EFLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDD 617
           +FLNKKKLEL+K K+EKS R+WCKE+FIN RS+R+ARD++SQI R VEQM LPL+SCGDD
Sbjct: 564 DFLNKKKLELSKEKLEKSLRKWCKENFINSRSLRHARDIHSQIRRHVEQMGLPLNSCGDD 623

Query: 618 ILQFRRCLAASFFLNAATKQPDGIYR 636
           +LQF RCLA SFFLN ATKQPDG YR
Sbjct: 624 MLQFCRCLAGSFFLNVATKQPDGTYR 649

[Close]

BLAST of HG10003611 vs. ExPASy TrEMBL
Match: A0A6J1DA28 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Momordica charantia OX=3673 GN=LOC111019037 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.9e-274
Identity = 491/625 (78.56%), Postives = 539/625 (86.24%), Query Frame = 0


Query: 20  INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
           I E  K LP   +E   +Q VH ND LI+VG+TGSGKTTQIPQFLFNAGFCR G+AIGVT
Sbjct: 16  IEEQRKSLPIASVEKLLVQRVHSNDTLIIVGDTGSGKTTQIPQFLFNAGFCRDGRAIGVT 75

Query: 80  QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
           QPRR+AA++VAKRVAEECGV +G KVGYSIRFED TSS TRIKYMTDG+LLREALLDPYL
Sbjct: 76  QPRRVAAVTVAKRVAEECGVELGQKVGYSIRFEDETSSSTRIKYMTDGLLLREALLDPYL 135

Query: 140 SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDS-------FNAVNMTLENRNSS 199
           SRYSVIIVDEAHERTV+TDVLLG+LK+VQ+ RS+SLNDS        N  +M LEN N  
Sbjct: 136 SRYSVIIVDEAHERTVNTDVLLGFLKKVQRARSRSLNDSVMSNTENMNVNSMMLENGNGG 195

Query: 200 EYVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPIL 259
           +  SS KRCQGRKLPPLKLIIMSASL+A LFSE+FGGA+  HV GRQ+PV IFY   P  
Sbjct: 196 KNDSSFKRCQGRKLPPLKLIIMSASLDARLFSEYFGGARAVHVQGRQYPVDIFYLYKPDP 255

Query: 260 DYIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYS 319
           DY+E  LITIFQIHLEESPGD+L FLTGQEEIES+ENLVKD+IQKLPE +RNLV IPIYS
Sbjct: 256 DYLEAILITIFQIHLEESPGDILTFLTGQEEIESMENLVKDKIQKLPEGRRNLVTIPIYS 315

Query: 320 ALPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESL 379
           ALPSEQQLRVFAP P G+RKVILATNIAETSLTIPGIKYVIDPG VKARTYDP+K MESL
Sbjct: 316 ALPSEQQLRVFAPAPPGIRKVILATNIAETSLTIPGIKYVIDPGLVKARTYDPSKGMESL 375

Query: 380 TIVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKAL 439
            I+ TSK QALQRSGRAGREGPGKCFR YPE  F K EDSTKPEIKR NLSNVILQLKAL
Sbjct: 376 IIIPTSKEQALQRSGRAGREGPGKCFRLYPEITFDKLEDSTKPEIKRCNLSNVILQLKAL 435

Query: 440 GVDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALI 499
           GVD+II FDFLE+PPRQ I +S EQL+LL ALT DG+LSNP+GHQMA LPLDP+YSKALI
Sbjct: 436 GVDDIIGFDFLEKPPRQAIIRSLEQLLLLRALTDDGKLSNPIGHQMARLPLDPMYSKALI 495

Query: 500 VASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADE 559
           VA Q NCLEEMLITVSMLSVESIFY+PREKLEEARAK+K FSSPEGDHLTLINVYRSA+E
Sbjct: 496 VAGQFNCLEEMLITVSMLSVESIFYSPREKLEEARAKMKCFSSPEGDHLTLINVYRSAEE 555

Query: 560 FLNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDI 619
           FL+KK L  +K KVEKS R+WCKE+FIN RS+R+ARDV+SQI   VEQM LPL SCG+D+
Sbjct: 556 FLSKKTLTFSKEKVEKSLRKWCKENFINSRSLRHARDVHSQIRGHVEQMSLPLQSCGEDM 615

Query: 620 LQFRRCLAASFFLNAATKQPDGIYR 636
           LQFRRCLAASFFLNAATKQPDG YR
Sbjct: 616 LQFRRCLAASFFLNAATKQPDGTYR 640

[Close]

BLAST of HG10003611 vs. TAIR 10
Match: AT1G26370.1 (RNA helicase family protein )

HSP 1 Score: 810.8 bits (2093), Expect = 7.6e-235
Identity = 402/624 (64.42%), Postives = 499/624 (79.97%), Query Frame = 0


Query: 20  INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
           I E  + LP   +E R ++EV +ND+LI+VGETGSGKTTQ+PQFL+NAGFCR GK IG+T
Sbjct: 34  IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 93

Query: 80  QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
           QPRR+AA++VAKRVAEEC V +G KVGYSIRF+D TS  TR+KYMTDG+LLREALLDP+L
Sbjct: 94  QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 153

Query: 140 SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDS------FNAVNMTLENRNSSE 199
           SRYSVIIVDEAH+R+V TDVLL  LK++Q+ RS+ +++        + V  T  + N  +
Sbjct: 154 SRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQ 213

Query: 200 YVSSLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILD 259
               LK  QGRKL PLKLIIMSASL+A +FSE+FGGAK  HV GRQ PV I Y  HP  D
Sbjct: 214 QNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESD 273

Query: 260 YIEGTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSA 319
           Y++ TL+TIFQIH EE PGD+L FLTGQ+EIES+E LV++ +Q +PE+KR L+ + I+SA
Sbjct: 274 YVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSA 333

Query: 320 LPSEQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLT 379
           LPSEQQ++VFAP P+G RKVILATNIAETS+TIPGI+YVIDPGFVKAR+YDP+K MESL 
Sbjct: 334 LPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLD 393

Query: 380 IVRTSKAQALQRSGRAGREGPGKCFRPYPENMFYKFEDSTKPEIKRSNLSNVILQLKALG 439
           +V  SKAQ LQRSGRAGREGPGK FR YPE  F K EDSTKPEIKR NLSN+ILQLKALG
Sbjct: 394 VVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALG 453

Query: 440 VDNIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIV 499
           +D+I+ FDF+++P R  I K+  +L  LGAL  DG+L NPVG+QM+ LPL+P+YSKALI+
Sbjct: 454 IDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALIL 513

Query: 500 ASQSNCLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEF 559
           A+Q NCLEEMLITV++LSVESIFY+PREK EEAR    +F+S EGDHLT ++VYR +DEF
Sbjct: 514 ANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEF 573

Query: 560 LNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDIL 619
           L K+K   + N ++K  ++WCKE+++N RS+++ARD+Y QI   VEQ+   + SCG+D+L
Sbjct: 574 LEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDML 633

Query: 620 QFRRCLAASFFLNAATKQPDGIYR 636
            FRRCLAASFFL AA +Q DG YR
Sbjct: 634 AFRRCLAASFFLKAAQRQLDGTYR 657

[Close]

BLAST of HG10003611 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 505.0 bits (1299), Expect = 8.9e-143
Identity = 275/624 (44.07%), Postives = 392/624 (62.82%), Query Frame = 0


Query: 17  VRDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAI 76
           + ++ E  + LP      + ++ V E+ VL++VG+TGSGKTTQIPQ+L  AG+ + GK +
Sbjct: 394 LEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK-V 453

Query: 77  GVTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLD 136
           G TQPRR+AA+SVA RVA+E GV +G +VGYSIRFED TS  T +KYMTDG+LLRE L +
Sbjct: 454 GCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGE 513

Query: 137 PYLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVS 196
           P L+ YSV+IVDEAHERT+ TD+L G +K + + R                         
Sbjct: 514 PDLASYSVVIVDEAHERTLSTDILFGLVKDIARFR------------------------- 573

Query: 197 SLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIE 256
                     P LKL+I SA+++A  FS++F  A +F   GR++PV I Y   P  DY++
Sbjct: 574 ----------PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMD 633

Query: 257 GTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPS 316
             ++TI  IH+ E  GD+L F TGQEEIE+ E ++K  I+ L  + R L++ PIY+ LPS
Sbjct: 634 AAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPS 693

Query: 317 EQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVR 376
           E Q ++F PTP G RKV+LATNIAETSLTI GIKYV+DPGF K ++Y+P   MESL I  
Sbjct: 694 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITP 753

Query: 377 TSKAQALQRSGRAGREGPGKCFRPYPE-NMFYKFEDSTKPEIKRSNLSNVILQLKALGVD 436
            SKA A QR+GRAGR  PGKC+R Y   N     E++T PE++R+NL++V+L LK+LG+ 
Sbjct: 754 ISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIH 813

Query: 437 NIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVAS 496
           ++I FDF++ PP + + KS E L  LGAL   GEL+   G +MA  PLDP+ SK ++V+ 
Sbjct: 814 DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTK-AGRRMAEFPLDPMLSKMIVVSD 873

Query: 497 QSNCLEEMLITVSMLSV-ESIFYNPREKLEEA-RAKVKYFSSPEGDHLTLINVYRSADEF 556
           +  C +E++   +MLS+  SIFY P++K   A  A++ + +   GDH+ L+ VY S  E 
Sbjct: 874 KYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE- 933

Query: 557 LNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDIL 616
                             +WC E++I  RS++ ARD+  Q+   +E++ + + S  +++ 
Sbjct: 934 -------------TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELD 966

Query: 617 QFRRCLAASFFLNAATKQPDGIYR 636
             R+ + A FF + A  Q +G YR
Sbjct: 994 SVRKSIVAGFFPHTAKLQKNGSYR 966

[Close]

BLAST of HG10003611 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 505.0 bits (1299), Expect = 8.9e-143
Identity = 275/624 (44.07%), Postives = 392/624 (62.82%), Query Frame = 0


Query: 17  VRDINEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAI 76
           + ++ E  + LP      + ++ V E+ VL++VG+TGSGKTTQIPQ+L  AG+ + GK +
Sbjct: 384 LEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK-V 443

Query: 77  GVTQPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLD 136
           G TQPRR+AA+SVA RVA+E GV +G +VGYSIRFED TS  T +KYMTDG+LLRE L +
Sbjct: 444 GCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGE 503

Query: 137 PYLSRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVS 196
           P L+ YSV+IVDEAHERT+ TD+L G +K + + R                         
Sbjct: 504 PDLASYSVVIVDEAHERTLSTDILFGLVKDIARFR------------------------- 563

Query: 197 SLKRCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIE 256
                     P LKL+I SA+++A  FS++F  A +F   GR++PV I Y   P  DY++
Sbjct: 564 ----------PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMD 623

Query: 257 GTLITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPS 316
             ++TI  IH+ E  GD+L F TGQEEIE+ E ++K  I+ L  + R L++ PIY+ LPS
Sbjct: 624 AAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPS 683

Query: 317 EQQLRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVR 376
           E Q ++F PTP G RKV+LATNIAETSLTI GIKYV+DPGF K ++Y+P   MESL I  
Sbjct: 684 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITP 743

Query: 377 TSKAQALQRSGRAGREGPGKCFRPYPE-NMFYKFEDSTKPEIKRSNLSNVILQLKALGVD 436
            SKA A QR+GRAGR  PGKC+R Y   N     E++T PE++R+NL++V+L LK+LG+ 
Sbjct: 744 ISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIH 803

Query: 437 NIIEFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVAS 496
           ++I FDF++ PP + + KS E L  LGAL   GEL+   G +MA  PLDP+ SK ++V+ 
Sbjct: 804 DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTK-AGRRMAEFPLDPMLSKMIVVSD 863

Query: 497 QSNCLEEMLITVSMLSV-ESIFYNPREKLEEA-RAKVKYFSSPEGDHLTLINVYRSADEF 556
           +  C +E++   +MLS+  SIFY P++K   A  A++ + +   GDH+ L+ VY S  E 
Sbjct: 864 KYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE- 923

Query: 557 LNKKKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDIL 616
                             +WC E++I  RS++ ARD+  Q+   +E++ + + S  +++ 
Sbjct: 924 -------------TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELD 956

Query: 617 QFRRCLAASFFLNAATKQPDGIYR 636
             R+ + A FF + A  Q +G YR
Sbjct: 984 SVRKSIVAGFFPHTAKLQKNGSYR 956

[Close]

BLAST of HG10003611 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-142
Identity = 276/619 (44.59%), Postives = 380/619 (61.39%), Query Frame = 0


Query: 20   INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
            I E  + LP   ++   IQ VH+N VL+V+GETGSGKTTQ+ Q+L  AG+   GK IG T
Sbjct: 508  IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGCT 567

Query: 80   QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
            QPRR+AA+SVAKRVAEE G  +G++VGY+IRFED T   T IKYMTDG+LLRE L+D  L
Sbjct: 568  QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 627

Query: 140  SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLK 199
            S+YSVI++DEAHERT+ TDVL G LK++ K R                            
Sbjct: 628  SQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRL--------------------------- 687

Query: 200  RCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTL 259
                     L+LI+ SA+L+A  FS +F    +F + GR  PV I Y + P  DY++  L
Sbjct: 688  --------DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAAL 747

Query: 260  ITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQ 319
            IT+ QIHL E  GD+L FLTGQEEI+S    + + ++ L +    L+++P+YSALPSE Q
Sbjct: 748  ITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 807

Query: 320  LRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSK 379
             R+F P P G RKV++ATNIAE SLTI GI YV+DPGF K   Y+P + +ESL I   S+
Sbjct: 808  SRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 867

Query: 380  AQALQRSGRAGREGPGKCFRPYPENMF-YKFEDSTKPEIKRSNLSNVILQLKALGVDNII 439
            A A QR+GRAGR GPGKC+R Y E+ +  +   ++ PEI+R NL    L +KA+G+++++
Sbjct: 868  ASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLL 927

Query: 440  EFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSN 499
             FDF++ P  Q +  + EQL  LGAL  +G L+  +G +MA  PL+P  SK L+ +    
Sbjct: 928  SFDFMDPPQPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLLASVDLG 987

Query: 500  CLEEMLITVSMLSVESIFYNPREKLEEARAKVKYFSSPEGDHLTLINVYRSADEFLNKKK 559
            C +E+L  ++M+   +IFY PREK  +A  K   F  PEGDHLTL+ VY +         
Sbjct: 988  CSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW-------- 1047

Query: 560  LELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFRRC 619
                  K +     WC E+FI  RS+R A+DV  Q+   +++ +L + + G +  + R+ 
Sbjct: 1048 ------KAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKA 1075

Query: 620  LAASFFLNAATKQPDGIYR 636
            + A FF + A K P   YR
Sbjct: 1108 ITAGFFFHGARKDPQEGYR 1075

[Close]

BLAST of HG10003611 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 501.9 bits (1291), Expect = 7.5e-142
Identity = 277/621 (44.61%), Postives = 386/621 (62.16%), Query Frame = 0


Query: 20  INEPSKHLP--DIETRFIQEVHENDVLIVVGETGSGKTTQIPQFLFNAGFCRHGKAIGVT 79
           + E  K LP      + +  V ++ VLI+VGETGSGKTTQIPQ+L  AG+ + GK +G T
Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGK-VGCT 456

Query: 80  QPRRLAALSVAKRVAEECGVMVGDKVGYSIRFEDVTSSYTRIKYMTDGILLREALLDPYL 139
           QPRR+AA+SVA RVA+E G  +G +VGYSIRFED TS  T +KYMTDG+LLRE L +P L
Sbjct: 457 QPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDL 516

Query: 140 SRYSVIIVDEAHERTVDTDVLLGYLKRVQKERSKSLNDSFNAVNMTLENRNSSEYVSSLK 199
             YSVIIVDEAHERT+ TD+L G +K + + R                            
Sbjct: 517 GSYSVIIVDEAHERTLRTDILFGLVKDIARAR---------------------------- 576

Query: 200 RCQGRKLPPLKLIIMSASLNAPLFSEFFGGAKVFHVHGRQHPVAIFYARHPILDYIEGTL 259
                  P LKL+I SA+++A  FS+FF  A +F   GR++PV I +   P  DY++  +
Sbjct: 577 -------PDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAI 636

Query: 260 ITIFQIHLEESPGDVLAFLTGQEEIESIENLVKDEIQKLPEEKRNLVVIPIYSALPSEQQ 319
            T+  IH++E  GDVL FL GQEEIE++E  +K +I+ L  + R L++ PIY+ LPSE Q
Sbjct: 637 TTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQ 696

Query: 320 LRVFAPTPSGVRKVILATNIAETSLTIPGIKYVIDPGFVKARTYDPNKRMESLTIVRTSK 379
            ++F PTP G RKV+LATNIAETSLTI GIKYV+DPGF K ++Y+P   MESL +   SK
Sbjct: 697 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISK 756

Query: 380 AQALQRSGRAGREGPGKCFRPYPE-NMFYKFEDSTKPEIKRSNLSNVILQLKALGVDNII 439
           A A QR+GRAGR  PGKC+R Y   N +   ED+T PEI+R+NL++V+L LK+LG+ N++
Sbjct: 757 ASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLL 816

Query: 440 EFDFLEEPPRQTIFKSFEQLMLLGALTGDGELSNPVGHQMAHLPLDPIYSKALIVASQSN 499
            FDF++ PP + + KS E L  LGAL   GEL+   G +MA  PLDP+ SK ++V+ +  
Sbjct: 817 NFDFMDPPPSEALIKSLELLFALGALNQLGELTK-AGRRMAEFPLDPMLSKMIVVSDKYK 876

Query: 500 CLEEMLITVSMLSV-ESIFYNPREKLEEARAKVKYFS-SPEGDHLTLINVYRSADEFLNK 559
           C +E++   +MLS+  SIFY P++K   A   +K F     GDH+  + +Y         
Sbjct: 877 CSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIY--------- 936

Query: 560 KKLELNKNKVEKSFRRWCKEHFINCRSIRYARDVYSQITRQVEQMRLPLHSCGDDILQFR 619
                N  K      +WC E++I  RS++ ARD+  Q+   +E++ + + S  +++   R
Sbjct: 937 -----NSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIR 966

Query: 620 RCLAASFFLNAATKQPDGIYR 636
           + + A FF + A  Q +G YR
Sbjct: 997 KSIVAGFFPHTAKLQKNGSYR 966

The following BLAST results are available for this feature:

BLAST of HG10003611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932160.1	8.9e-286	81.12	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita moschata] ...	[more]
KAG6577426.1	2.6e-285	81.12	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10, partial [Cucurbita a...	[more]
XP_023520426.1	9.8e-285	80.96	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita pepo subsp...	[more]
XP_038904722.1	2.2e-284	80.96	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X2 [Benincasa...	[more]
XP_022985184.1	3.7e-284	80.29	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita maxima] >X...	[more]

BLAST of HG10003611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IE66	1.1e-233	64.42	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Arabidopsis thalia...	[more]
Q54F05	7.3e-150	46.70	ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=...	[more]
Q14562	1.1e-148	45.40	ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1	[more]
A2A4P0	1.1e-148	45.40	ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1	[more]
O42643	4.0e-148	46.61	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces...	[more]

BLAST of HG10003611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVL1	4.3e-286	81.12	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita moschata...	[more]
A0A6J1JAN7	1.8e-284	80.29	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita maxima O...	[more]
A0A1S3CJ82	1.7e-282	80.64	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucumis melo OX=36...	[more]
A0A0A0L7N3	5.4e-281	80.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077650 PE=4 SV=1	[more]
A0A6J1DA28	2.9e-274	78.56	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Momordica charanti...	[more]

BLAST of HG10003611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26370.1	7.6e-235	64.42	RNA helicase family protein	[more]
AT1G32490.1	8.9e-143	44.07	RNA helicase family protein	[more]
AT1G32490.2	8.9e-143	44.07	RNA helicase family protein	[more]
AT3G26560.1	1.2e-142	44.59	ATP-dependent RNA helicase, putative	[more]
AT2G35340.1	7.5e-142	44.61	helicase domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 291..391 e-value: 8.0E-18 score: 75.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 263..390 e-value: 1.2E-14 score: 54.6
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 257..431 score: 16.299973
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 451..542 e-value: 8.7E-25 score: 98.3
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 453..575 e-value: 1.2E-19 score: 70.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 19..243 e-value: 8.7E-27 score: 105.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 35..234 score: 18.865038
None	No IPR available	GENE3D	1.20.120.1080		coord: 436..536 e-value: 9.1E-23 score: 82.2
None	No IPR available	PANTHER	PTHR18934:SF231	BNAA08G19730D PROTEIN	coord: 18..635
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 18..635
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 238..399 e-value: 2.23948E-74 score: 233.965
None	No IPR available	CDD	cd17978	DEXHc_DHX33	coord: 31..233 e-value: 6.29701E-96 score: 290.393
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 15..236 e-value: 2.0E-76 score: 258.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 237..410 e-value: 2.9E-64 score: 218.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 31..579
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 141..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003611.1	HG10003611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity