HG10003599 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003599
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	keratin, type II cytoskeletal 3 isoform X1
Location	Chr08: 3921793 .. 3924682 (-)
RNA-Seq Expression	HG10003599
Synteny	HG10003599

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGAAACAGACACCAAGGCGGAGAAGATGAGAACGGATTACTCTGGAATCTTCCAGTTCTTAAATCTTCCAGAATCGGAAAGTTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTTGTCGGAGGTCAATTCTTCATCATTTCTCTCTTTCCCTTTTTGTTTCACTCATAACTAACTTGTTATTCCCCTGTTGGATTCCTTTGGTTTTTCTATTTCAATTATGTTGCTTAAAATCAATTTTCTATGTGGATTGTTCCACTTTACAACTTGCTGATTCCTTTAATCGGAGGTATTCTTGTTGAATTGGAGGGTGAGGTAGGTTGGGTGGGGTTATTCAGTCTGATTATCGTTTTAATTTGTATTTGTGCCTTCTACTGTCTTTGACTCTTATCCTTCACTATTTCATGTTTCTTGCATTCTGGTTGAGAGTGTTTATGGATTTGCTGCTGAAATTCTGTAGCCTTATGACATTTTCCCCAAGTTCAGGAAGCGTTTGACTTTTTTTTGAAGCACAAAGATGGAGTAGACGCAATACAAGATCACAGCATTTCTATTTTTTTTCAAAAAGTAATGATAAAAGATACTATGGTTAAAGCAAATATGTTAAATTTTAGACTTGAGAAAGGGAATGCTATTTTCTAGGGTGGTCTGATGAGCATTCAAAGGATTAAAGTGAACCACCAAGCAAAATACCTAATTTTCCTACAAAATAGCTCAAATATGAATCCCCAAATAGGCCCAGATGTAGTTCATTCAGGTGCTTCTTCTTTTTCTTTTAGTCTATCTGCAGTGTTCATCTTTAACATATTTTTAAATTTTATTTTTGTCCTTTGGGAAGTGCAATGTATTTTTTATCTTCCCAGTGGAGGGAGGATGGTATGAGTGGTATACTTCTGGATACTGTTGACTATTTCATGCTTCATTTTTGTTATTCAACAATTTAGACATGCCTTTTGATGGATATATTCGAGAAGAATAGTAAATCTGTATTAGTGGTCGTGAAATTTATGGACGCAATTTCTTCAAGAAGTTTATTGGGATGTTAAGTGTCATTCGTATGCGATTATGTTTTGTTTGTATAATTGTAATCAATATGATAAGCTTTTATCATTTTCACGAGTTTATCATCCAACACCTTTTTTCTTTGTCTTTTCATTTCTTCTTTCCTGCTAATATATATATTCGGTTTTGTTAACTTTGGAGTCTACAAGCGTCACTTGGCTGCATGTTTTAAGTTCCATCAATCTGTTTAGAAGGATTTTAAGGTGCCAAAAGCTTGAAATGTACTAGGCTTTAAAAATTGGACTTCAAAAAATTGGACTTCACAAAGTACTTCCATGTTGATGAGGAATAAATTCTCTCTATCCTTTGTGATAGTATGGTTTGTAGTCTTTAAAAACTGCCATGGATTTTCTTTTTGATAGTAGACATTATATGGATGACAAAAGAGAGAACAAAGGGAACTGGGAAGATAAAACATTCTTTGCAATTCCCACATGCACACTTATGCACAAACATAGAAGAAGAAGAAGCTATCATGGATTTTGGGTTTTGGTAGAAGGTAGGGCTTGAGTGTCAACTAATCAATATTATCATTCTGTAAATTTTATTTTGAACTTTATACTGTGGTGAACTATCCTTGTTTAGTTTAATTGAAACTACTCAAATATGAATTTGCAAAAACTGTTCTCCACTCTAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGATATGGTGTTGGCAGGGGCATTGCTCAAGATGACAAACGGAGATACTCTAACGTTGGAGATCTATTAAATGGTCATCAAAGTATTTTTCCTCAGTAAGTTCCAAACCAACTGTTTTCAACTTGTGACAATTATGTTCTGTTAGTGATGCATTAGGGATAATTAACTTTCTTGTGGCTTTGGTGACCTGGATTTTTCCTAAGCATGTATATACTAAGATGGCAATTTTTTGTGACGGAAGATTCAAAATAGTCCCATTCTTTATCTTTTTTCACTCCTCTCTCTTCCCACGCTGTCCCATTTCTCTCTCTTTCTGCTTAGTTTTACCCTTCATGCTCTCTCTCCTTCCCTATTTTTCTCAATCTTATGAGTACCTTCCCTCTCTATATTGTGATTTACTTTCAGTTTCCACATCTACCCTTCTAACAGGACTTGTTACATTAAAAATATCCGTGGTCTTTCCATCTTGTCATTTCAACTCAGCTCATCTTCTTTCGATAACCTAGAACAATTGGGGTCAGCTTAGATGTTGATCTTGAAAAATTGCCAATTGTTTTTAAAATATTCATGTTCTTTCAAAATTTGCAATATTACCCTTAGTCTTTTAAAAATGTTTTTTCCACTCAAATTACTAGCATAACTCTTTCTTGTTCCCATTTGACTAGGGGATGCTATCTTTGTCCACCTCAGTTGTCTGGGTGAAATCATTGAACCTAACTGTTAATTGTCCAAATCGTTAAACCACCCTATGTTGTACCATCTTGATTACATTTTTAGGACTGTCAGAATAATAATTCCTTTTCAAATCATCTTGTAAGTTGCATTGCATAGGATTAAAATAATGTTTTTTCTTAAGCTGTAATAACTGGAATCTAAACAGTGAAGTTAGAAATTGATTGATGACATTTCCACGATTTTCAAATACTAGAACTTCAATATTCTGATATCAAGAAATATTTCATGATTTTCATTTTTACTTGTCATCAGTAGGGACGATATTGGCACGCTTGTTGACGAGGTTGTCCTAAATACAAAGAGGCTTATACGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA

mRNA sequence

ATGAACGGAAACAGACACCAAGGCGGAGAAGATGAGAACGGATTACTCTGGAATCTTCCAGTTCTTAAATCTTCCAGAATCGGAAAGTTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTTGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGATATGGTGTTGGCAGGGGCATTGCTCAAGATGACAAACGGAGATACTCTAACGTTGGAGATCTATTAAATGGTCATCAAAGTATTTTTCCTCAGGACGATATTGGCACGCTTGTTGACGAGGTTGTCCTAAATACAAAGAGGCTTATACGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA

Coding sequence (CDS)

ATGAACGGAAACAGACACCAAGGCGGAGAAGATGAGAACGGATTACTCTGGAATCTTCCAGTTCTTAAATCTTCCAGAATCGGAAAGTTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTTGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGATATGGTGTTGGCAGGGGCATTGCTCAAGATGACAAACGGAGATACTCTAACGTTGGAGATCTATTAAATGGTCATCAAAGTATTTTTCCTCAGGACGATATTGGCACGCTTGTTGACGAGGTTGTCCTAAATACAAAGAGGCTTATACGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA

Protein sequence

MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVVLNTKRLIRATSREIDKWKR

Homology

[Close]

BLAST of HG10003599 vs. NCBI nr
Match: XP_038889093.1 (ctenidin-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 2   NGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGL 61
           NGNRHQGGEDE GLLWNLPVLKSSR GKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGL
Sbjct: 6   NGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGL 65

Query: 62  QLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQ-DDIGTLVDEVV 121
           QLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLL+GHQSIFPQ DDI  LVDE+V
Sbjct: 66  QLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQKDDIVALVDELV 125

Query: 122 LNTKRLIRATSREIDKWKR 140
           LN+KRLIRATSREIDKWKR
Sbjct: 126 LNSKRLIRATSREIDKWKR 144

[Close]

BLAST of HG10003599 vs. NCBI nr
Match: KAG6592270.1 (hypothetical protein SDJN03_14616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65
Identity = 125/139 (89.93%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+RH+GGEDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNGHQSIFPQD+IG LVDE+ 
Sbjct: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120

Query: 121 LNTKRLIRATSREIDKWKR 140
           LNTK+LIR T+REIDKWKR
Sbjct: 121 LNTKKLIRVTAREIDKWKR 139

[Close]

BLAST of HG10003599 vs. NCBI nr
Match: XP_023521209.1 (fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 3.8e-64
Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+RH+G EDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNGHQSIFPQD+IG LVDE+ 
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 124

Query: 121 LNTKRLIRATSREIDKWKR 140
           LNTK+LIR T+REIDKWKR
Sbjct: 125 LNTKKLIRVTAREIDKWKR 143

[Close]

BLAST of HG10003599 vs. NCBI nr
Match: XP_016902400.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] >XP_016902401.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 8.4e-64
Identity = 128/140 (91.43%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGNR++ GEDE GLLWNLPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDDIGTLVDEV 120
           LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L GHQSIFP QDDIG LVD++
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGALVDDL 124

Query: 121 VLNTKRLIRATSREIDKWKR 140
           VLNTKRLIRATSREIDKWKR
Sbjct: 125 VLNTKRLIRATSREIDKWKR 144

[Close]

BLAST of HG10003599 vs. NCBI nr
Match: XP_022932820.1 (keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+RH+GGEDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNG QSIFPQD+IG LVDE+ 
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGALVDELA 124

Query: 121 LNTKRLIRATSREIDKWKR 140
           LNTK+LIR T++EIDKWKR
Sbjct: 125 LNTKKLIRVTAQEIDKWKR 143

[Close]

BLAST of HG10003599 vs. ExPASy TrEMBL
Match: A0A1S4E347 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498610 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 128/140 (91.43%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGNR++ GEDE GLLWNLPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDDIGTLVDEV 120
           LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L GHQSIFP QDDIG LVD++
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGALVDDL 124

Query: 121 VLNTKRLIRATSREIDKWKR 140
           VLNTKRLIRATSREIDKWKR
Sbjct: 125 VLNTKRLIRATSREIDKWKR 144

[Close]

BLAST of HG10003599 vs. ExPASy TrEMBL
Match: A0A6J1F360 (keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.3e-64
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+RH+GGEDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNG QSIFPQD+IG LVDE+ 
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGALVDELA 124

Query: 121 LNTKRLIRATSREIDKWKR 140
           LNTK+LIR T++EIDKWKR
Sbjct: 125 LNTKKLIRVTAQEIDKWKR 143

[Close]

BLAST of HG10003599 vs. ExPASy TrEMBL
Match: A0A0A0KSM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646690 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGNR+Q GEDE GLLWNLPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDDIGTLVDEV 120
           LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L G QSIFP QDDIG LVD++
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGRQSIFPHQDDIGALVDDL 124

Query: 121 VLNTKRLIRATSREIDKWKR 140
           VLNTKRLIRATS+EIDKWKR
Sbjct: 125 VLNTKRLIRATSKEIDKWKR 144

[Close]

BLAST of HG10003599 vs. ExPASy TrEMBL
Match: A0A6J1IA95 (keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+R +GGEDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNG QSIFPQD+IG +VDE+ 
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGAVVDELA 124

Query: 121 LNTKRLIRATSREIDKWKR 140
           LNTK+LI+ T++EIDKWKR
Sbjct: 125 LNTKKLIQVTAKEIDKWKR 143

[Close]

BLAST of HG10003599 vs. ExPASy TrEMBL
Match: A0A6J1EY31 (keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.8e-62
Identity = 122/140 (87.14%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MNGNRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+RH+GGEDE+G+LW LPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDDIGTLVDEV 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLLNG QSIFP +D+IG LVDE+
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGALVDEL 124

Query: 121 VLNTKRLIRATSREIDKWKR 140
            LNTK+LIR T++EIDKWKR
Sbjct: 125 ALNTKKLIRVTAQEIDKWKR 144

[Close]

BLAST of HG10003599 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 161.0 bits (406), Expect = 6.9e-40
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 4   NRHQGGEDENGLLWNLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQL 63
           NR + G+D+ GLLW LP ++   IGK+GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ 
Sbjct: 3   NRRRTGDDDKGLLWKLPQVRIRDIGKVGPAFGLGVGCGFGFGAGLIGGVGFGPGVPGLQF 62

Query: 64  GFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLNGHQSIFPQDDIGTLVDEVVLNT 123
           G G GAGCG+G+GFGYGVGRG A D  R Y NVG            +++ +L+DE+V++T
Sbjct: 63  GLGFGAGCGIGVGFGYGVGRGAAYDHSRSYYNVGKP--------SLNEVDSLIDELVVST 122

Query: 124 KRLIRATSREIDKW 138
           K+L++AT+ EIDKW
Sbjct: 123 KKLVKATTNEIDKW 128

[Close]

BLAST of HG10003599 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.3e-08
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 30  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRG 89
           +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G
Sbjct: 39  VGPGIGGGIGCGAGIGIGLSGGLGIGAS-EGLDHSNVVLGFGIGCGIGFGFGYGFGVGGG 98

Query: 90  IAQDD-KRRY 94
            + DD K R+
Sbjct: 99  YSFDDIKERF 107

[Close]

BLAST of HG10003599 vs. TAIR 10
Match: AT4G14301.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23450.1); Has 101 Blast hits to 93 proteins in 34 species: Archae - 0; Bacteria - 27; Metazoa - 16; Fungi - 5; Plants - 34; Viruses - 3; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 6.1e-04
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 27  IGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRG 85
           IGK G  FG G+G G GFG G+  G GFG GI G   G G G G G G GFG G+G+G
Sbjct: 53  IGKGGGIFGHGIGKGGGFGGGISKGGGFGGGI-GKGGGIGGGIGKGKGWGFGGGIGKG 109

The following BLAST results are available for this feature:

BLAST of HG10003599 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889093.1	4.4e-65	94.24	ctenidin-1 isoform X1 [Benincasa hispida]	[more]
KAG6592270.1	4.4e-65	89.93	hypothetical protein SDJN03_14616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023521209.1	3.8e-64	89.21	fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_016902400.1	8.4e-64	91.43	PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] >XP_016902...	[more]
XP_022932820.1	1.1e-63	88.49	keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata]	[more]

BLAST of HG10003599 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10003599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E347	4.1e-64	91.43	glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498...	[more]
A0A6J1F360	5.3e-64	88.49	keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A0A0KSM8	2.6e-63	90.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646690 PE=4 SV=1	[more]
A0A6J1IA95	2.2e-62	86.33	keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EY31	3.8e-62	87.14	keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of HG10003599 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10330.1	6.9e-40	58.21	glycine-rich protein	[more]
AT1G66820.1	5.3e-08	51.43	glycine-rich protein	[more]
AT4G14301.1	6.1e-04	55.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34201:SF1	GLYCINE-RICH PROTEIN	coord: 1..139
None	No IPR available	PANTHER	PTHR34201	GLYCINE-RICH PROTEIN	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003599.1	HG10003599.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane