Homology
BLAST of HG10003594 vs. NCBI nr
Match:
XP_038889416.1 (pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida])
HSP 1 Score: 1018.5 bits (2632), Expect = 2.2e-293
Identity = 493/532 (92.67%), Postives = 509/532 (95.68%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
M+SVPIQP+LNQLVLAALEKCS LNHLKQLQGFLISLGHS+TQFFAFKLVRFCNLTLADL
Sbjct: 1 MSSVPIQPHLNQLVLAALEKCSQLNHLKQLQGFLISLGHSRTQFFAFKLVRFCNLTLADL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CYARFIFD+LTSPNVYLYTAMITAYASQPDPKAA LLYRNMVR G PRPNHFIYPHVLKS
Sbjct: 61 CYARFIFDHLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRHGAPRPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSR SD+GNARQ+FDEMLERSVVS
Sbjct: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRFCSDLGNARQMFDEMLERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGNVDSA+ELFESMPERDVPAWNALIAGCAQNGF EAIWLFKRMVSLAL
Sbjct: 181 WTAMISGYARLGNVDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EGNNN ERENKPNKIT+ASALSACGHTGMLHLGKWIHGYVFK Y GQDSFISNALLDMYG
Sbjct: 241 EGNNN-ERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKNYFGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMI+LK+LTSWNSLINCLALHGHSGSAIDLF ELVQCGD VKP+ VTF
Sbjct: 301 KCGNLKVARRVFDMISLKSLTSWNSLINCLALHGHSGSAIDLFVELVQCGDGVKPDGVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMRRDYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE +KWDEVRK
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRK 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YKTPGCSWIEVDNQ+ +FYSFDM HPSAEQIYKTLESMISFM
Sbjct: 481 VRKLLKEQNAYKTPGCSWIEVDNQIYQFYSFDMTHPSAEQIYKTLESMISFM 531
BLAST of HG10003594 vs. NCBI nr
Match:
XP_008459497.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo])
HSP 1 Score: 982.6 bits (2539), Expect = 1.3e-282
Identity = 479/532 (90.04%), Postives = 499/532 (93.80%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
M+SV IQP+L QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 26 MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 85
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAA LLYRNMVR G RPNHFIYPHVLKS
Sbjct: 86 CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 145
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CP+VL SN TKMVHTQVLKSGFG+YPVVQTAIVDSYSR SS IGNARQ+FDEM+ERSVVS
Sbjct: 146 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 205
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGN DSA+ELFESMPERDVPAWNALIAGCAQNGF EAIWLFK+MVSLAL
Sbjct: 206 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 265
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EGNNN +RENKPNK TLASALSACG+TGMLHLGKWIHGYVFKTY GQDSFISNALLDMYG
Sbjct: 266 EGNNN-DRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYG 325
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLFAELVQCGD VKP+ VTF
Sbjct: 326 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTF 385
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMRRDYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 386 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 445
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE KWDEVRK
Sbjct: 446 IEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRK 505
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K + YKTPGCSWIEVDNQV +FYSFDM HPS EQIYKTLESMISFM
Sbjct: 506 VRKLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMTHPSVEQIYKTLESMISFM 556
BLAST of HG10003594 vs. NCBI nr
Match:
XP_004141609.3 (pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativus])
HSP 1 Score: 981.9 bits (2537), Expect = 2.2e-282
Identity = 476/532 (89.47%), Postives = 498/532 (93.61%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
M+SV I P+LNQL +AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTLADL
Sbjct: 33 MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 92
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CYAR+IFDNLTSPNV+LYTAMITAYAS PDPKAA LLYRNMVRRG RPN+FIYPHVL+S
Sbjct: 93 CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 152
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CP+VL SN TKMVHTQVLKSGFG YPVVQTAIVDSYSR SSDIG+ARQ+FDEMLER+VVS
Sbjct: 153 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 212
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGN DSA+ELFESMPERDVPAWNALIAGCAQNGF EAIWLFKRMV LAL
Sbjct: 213 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLAL 272
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EGNNN +RENKPNK TL SALSACGHTGMLHLGKWIHGYVFKTY GQDSFISNALLDMYG
Sbjct: 273 EGNNN-DRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYG 332
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAEL+ CGD VKPN VTF
Sbjct: 333 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTF 392
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMRRDYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 393 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 452
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE KWDEVRK
Sbjct: 453 IEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRK 512
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VR+L K + YKTPGCSWIEVDNQV +FYSFDM+HPS E+IYKTLESMISFM
Sbjct: 513 VRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLESMISFM 563
BLAST of HG10003594 vs. NCBI nr
Match:
XP_023521314.1 (pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo] >XP_023536054.1 pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 981.5 bits (2536), Expect = 2.9e-282
Identity = 474/532 (89.10%), Postives = 501/532 (94.17%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
MASVPIQP+LNQLVL+ LEKCSHLN LKQLQGFLISLGHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1 MASVPIQPHLNQLVLSVLEKCSHLNQLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CY+RFIFD+L+SPNVYLYTAMITAYAS+ D KAA LLYRNMVRRGDP PNHFIYPHVLKS
Sbjct: 61 CYSRFIFDHLSSPNVYLYTAMITAYASESDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPE+LESNGTKMVHTQVLKSGFG YPVVQTAIVD+YSR +DIG ARQVFDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHTQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAM+SGYARLG++D+AM LFESMPERD+PAWNALIAGCAQNGF SEAI LFKRMVSLAL
Sbjct: 181 WTAMVSGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFSEAIGLFKRMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EG NKERE KPNK+T+ASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG
Sbjct: 241 EG--NKERETKPNKVTVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF ELVQC D VKP+ VTF
Sbjct: 301 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCEDGVKPDGVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYFKMMR+DYDIEP+IEHFGCLIDLLGRAGRFEEAMEVV+GMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDP NGGYRIMLANIYAE + WDEVR+
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRR 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YK PGCSWIEVDNQV +FYSFDM+HP+AEQIYKTLESMI FM
Sbjct: 481 VRKLLKEQNAYKIPGCSWIEVDNQVYQFYSFDMSHPNAEQIYKTLESMIIFM 530
BLAST of HG10003594 vs. NCBI nr
Match:
XP_022974048.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima])
HSP 1 Score: 979.5 bits (2531), Expect = 1.1e-281
Identity = 474/532 (89.10%), Postives = 500/532 (93.98%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
MASVP+QP+LNQLVL+ LEKCSHLNHLKQLQGFLISLGHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1 MASVPMQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CY+RFIFD+L+SPNVYLYTAMITAYAS+PD KAA LLYRNMVRRG P PNHFIYPHVLKS
Sbjct: 61 CYSRFIFDHLSSPNVYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPE+LESNGTKMVH QVLKSGFG YPVVQTAIVD+YSR +DIG ARQVFDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLG++D+AM LFESMPERD+PAWNALIAGCAQNGF EAI LFKRMVSLAL
Sbjct: 181 WTAMISGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EG NKERE KPNKIT+ASALS+CGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG
Sbjct: 241 EG--NKERETKPNKITVASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF ELVQC D V+P+AVTF
Sbjct: 301 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYFKMMR+DYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDP NGGYRIMLANIYAE + WDEVRK
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRK 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YK PGCSWIEVDN V +FYSFDM+HP+AEQIYKTLESMI FM
Sbjct: 481 VRKLLKEQNAYKIPGCSWIEVDNHVYQFYSFDMSHPNAEQIYKTLESMIIFM 530
BLAST of HG10003594 vs. ExPASy Swiss-Prot
Match:
Q9C501 (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1)
HSP 1 Score: 599.0 bits (1543), Expect = 5.3e-170
Identity = 285/525 (54.29%), Postives = 372/525 (70.86%), Query Frame = 0
Query: 10 LNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDN 69
LNQ + A + K HLNHLKQ+Q F+I G S + F FKL+RFC L L +L YARFIFD
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 70 LTSPNVYLYTAMITAYASQ--PDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLES 129
+ PN +LY A++TAY+S +A +R MV R PRPNHFIYP VLKS P + +
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 130 NGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISG 189
T +VHT + KSGF Y VVQTA++ SY+ S I ARQ+FDEM ER+VVSWTAM+SG
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202
Query: 190 YARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKE 249
YAR G++ +A+ LFE MPERDVP+WNA++A C QNG EA+ LF+RM++ E
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN---------E 262
Query: 250 RENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKV 309
+PN++T+ LSAC TG L L K IH + ++ L D F+SN+L+D+YGKCGNL+
Sbjct: 263 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEE 322
Query: 310 ARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCG-DDVKPNAVTFVGVLNA 369
A VF M + K+LT+WNS+INC ALHG S AI +F E+++ +D+KP+ +TF+G+LNA
Sbjct: 323 ASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNA 382
Query: 370 CTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEV 429
CTHGGLV KG YF +M + IEP+IEH+GCLIDLLGRAGRF+EA+EV+ M ++ DE
Sbjct: 383 CTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEA 442
Query: 430 VWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFK 489
+WGSLLN CKIHG LDLAE +VK L+ ++P NGGY M+AN+Y E W+E R+ RK+ K
Sbjct: 443 IWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIK 502
Query: 490 GQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISF 532
Q YK PG S IE+DN+V +FYS D +HP E+IY L+S+ISF
Sbjct: 503 HQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
BLAST of HG10003594 vs. ExPASy Swiss-Prot
Match:
Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 3.2e-106
Identity = 195/516 (37.79%), Postives = 309/516 (59.88%), Query Frame = 0
Query: 14 VLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSP 73
+++ L C ++ H+ + +I H Q F F+L+R C+ TL + YA +F +++P
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNP 91
Query: 74 NVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMV 133
NVYLYTAMI + S + LY M+ P++++ VLK+C + + +
Sbjct: 92 NVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVLKAC----DLKVCREI 151
Query: 134 HTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGN 193
H QVLK GFG V +++ Y + S ++ NA+++FDEM +R V+ T MI+ Y+ G
Sbjct: 152 HAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 211
Query: 194 VDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKEREN-KP 253
+ A+ELF+ + +D W A+I G +N +++A+ LF+ M + EN
Sbjct: 212 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM-----------QMENVSA 271
Query: 254 NKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVF 313
N+ T LSAC G L LG+W+H +V + +F+ NAL++MY +CG++ ARRVF
Sbjct: 272 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF 331
Query: 314 DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGL 373
++ K++ S+N++I+ LA+HG S AI+ F ++V G +PN VT V +LNAC+HGGL
Sbjct: 332 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG--FRPNQVTLVALLNACSHGGL 391
Query: 374 VEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLL 433
++ G F M+R +++EP+IEH+GC++DLLGR GR EEA + + IEPD ++ G+LL
Sbjct: 392 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 451
Query: 434 NGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYK 493
+ CKIHG ++L E K+L E + + G ++L+N+YA KW E ++R+ + K
Sbjct: 452 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 511
Query: 494 TPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESM 529
PGCS IEVDNQ+ F D+AHP E IY+ L+ +
Sbjct: 512 EPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
BLAST of HG10003594 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 1.2e-105
Identity = 195/513 (38.01%), Postives = 311/513 (60.62%), Query Frame = 0
Query: 18 LEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYL 77
L++ N K++ +I G SQ+ F K+V FC+ + D+ YA +F+ +++PNV+L
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76
Query: 78 YTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMVHTQV 137
Y ++I AY I +Y+ ++R+ P+ F +P + KSC + K VH +
Sbjct: 77 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136
Query: 138 LKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGNVDSA 197
K G + V + A++D Y + D+ +A +VFDEM ER V+SW +++SGYARLG + A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196
Query: 198 MELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKPNKITL 257
LF M ++ + +W A+I+G G EA+ F+ M +E P++I+L
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE----------PDEISL 256
Query: 258 ASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMITL 317
S L +C G L LGKWIH Y + + + + NAL++MY KCG + A ++F +
Sbjct: 257 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 316
Query: 318 KNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGLVEKGY 377
K++ SW+++I+ A HG++ AI+ F E+ + VKPN +TF+G+L+AC+H G+ ++G
Sbjct: 317 KDVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGL 376
Query: 378 SYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 437
YF MMR+DY IEPKIEH+GCLID+L RAG+ E A+E+ + M ++PD +WGSLL+ C+
Sbjct: 377 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 436
Query: 438 HGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYKTPGCS 497
G LD+A ++ L+E++P + G ++LANIYA+ KW++V ++RK+ + + KTPG S
Sbjct: 437 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 496
Query: 498 WIEVDNQVSRFYSFDMAHPSAEQIYKTLESMIS 531
IEV+N V F S D + P +I L+ S
Sbjct: 497 LIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTS 515
BLAST of HG10003594 vs. ExPASy Swiss-Prot
Match:
Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 1.7e-104
Identity = 196/511 (38.36%), Postives = 312/511 (61.06%), Query Frame = 0
Query: 24 LNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYLYTAMIT 83
+N +KQL + G +T+ +L L + +L YAR +FD+ + +LY +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60
Query: 84 AYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMVHTQVLKSGFG 143
AY P +I+LY N++ RP+H + + + + +++H+Q +SGF
Sbjct: 61 AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120
Query: 144 QYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGNVDSAMELFES 203
T ++ +Y++L + + AR+VFDEM +R V W AMI+GY R G++ +AMELF+S
Sbjct: 121 SDSFCCTTLITAYAKLGA-LCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180
Query: 204 MPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKPNKITLASALSA 263
MP ++V +W +I+G +QNG SEA+ +F M K++ KPN IT+ S L A
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCM---------EKDKSVKPNHITVVSVLPA 240
Query: 264 CGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMI-TLKNLTS 323
C + G L +G+ + GY + + ++ NA ++MY KCG + VA+R+F+ + +NL S
Sbjct: 241 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 300
Query: 324 WNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGLVEKGYSYFKM 383
WNS+I LA HG A+ LFA++++ G+ KP+AVTFVG+L AC HGG+V KG FK
Sbjct: 301 WNSMIGSLATHGKHDEALTLFAQMLREGE--KPDAVTFVGLLLACVHGGMVVKGQELFKS 360
Query: 384 MRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRLD 443
M + I PK+EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL C HG ++
Sbjct: 361 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 420
Query: 444 LAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYKTPGCSW-IEV 503
+AE + + L +++P N G ++++NIYA ++KWD V ++RKL K +T K G S+ +EV
Sbjct: 421 IAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 480
Query: 504 DNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
V +F D +HP + +IY+ LE + M
Sbjct: 481 GVDVHKFTVEDKSHPRSYEIYQVLEEIFRRM 493
BLAST of HG10003594 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 374.8 bits (961), Expect = 1.6e-102
Identity = 187/509 (36.74%), Postives = 294/509 (57.76%), Query Frame = 0
Query: 15 LAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFC-NLTLAD-LCYARFIFDNLTS 74
++ L++CS LKQ+ ++ G Q + K + FC + T +D L YA+ +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 75 PNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKM 134
P+ +L+ MI ++ +P+ ++LLY+ M+ P N + +P +LK+C + T
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQ 137
Query: 135 VHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLG 194
+H Q+ K G+ ++++SY+ ++ + A +FD + E VSW ++I GY + G
Sbjct: 138 IHAQITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197
Query: 195 NVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKP 254
+D A+ LF M E++ +W +I+G Q EA+ LF M + +E P
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE----------P 257
Query: 255 NKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVF 314
+ ++LA+ALSAC G L GKWIH Y+ KT + DS + L+DMY KCG ++ A VF
Sbjct: 258 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 317
Query: 315 DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGL 374
I K++ +W +LI+ A HGH AI F E+ + G +KPN +TF VL AC++ GL
Sbjct: 318 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG--IKPNVITFTAVLTACSYTGL 377
Query: 375 VEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLL 434
VE+G F M RDY+++P IEH+GC++DLLGRAG +EA ++ M ++P+ V+WG+LL
Sbjct: 378 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 437
Query: 435 NGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYK 494
C+IH ++L E + LI +DP +GG + ANI+A KKWD+ + R+L K Q K
Sbjct: 438 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 497
Query: 495 TPGCSWIEVDNQVSRFYSFDMAHPSAEQI 522
PGCS I ++ F + D +HP E+I
Sbjct: 498 VPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
BLAST of HG10003594 vs. ExPASy TrEMBL
Match:
A0A1S3CAA7 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN=LOC103498615 PE=4 SV=1)
HSP 1 Score: 982.6 bits (2539), Expect = 6.3e-283
Identity = 479/532 (90.04%), Postives = 499/532 (93.80%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
M+SV IQP+L QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 26 MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 85
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAA LLYRNMVR G RPNHFIYPHVLKS
Sbjct: 86 CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 145
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CP+VL SN TKMVHTQVLKSGFG+YPVVQTAIVDSYSR SS IGNARQ+FDEM+ERSVVS
Sbjct: 146 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 205
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGN DSA+ELFESMPERDVPAWNALIAGCAQNGF EAIWLFK+MVSLAL
Sbjct: 206 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 265
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EGNNN +RENKPNK TLASALSACG+TGMLHLGKWIHGYVFKTY GQDSFISNALLDMYG
Sbjct: 266 EGNNN-DRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYG 325
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLFAELVQCGD VKP+ VTF
Sbjct: 326 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTF 385
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMRRDYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 386 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 445
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE KWDEVRK
Sbjct: 446 IEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRK 505
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K + YKTPGCSWIEVDNQV +FYSFDM HPS EQIYKTLESMISFM
Sbjct: 506 VRKLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMTHPSVEQIYKTLESMISFM 556
BLAST of HG10003594 vs. ExPASy TrEMBL
Match:
A0A6J1IF22 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=3661 GN=LOC111472677 PE=4 SV=1)
HSP 1 Score: 979.5 bits (2531), Expect = 5.4e-282
Identity = 474/532 (89.10%), Postives = 500/532 (93.98%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
MASVP+QP+LNQLVL+ LEKCSHLNHLKQLQGFLISLGHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1 MASVPMQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CY+RFIFD+L+SPNVYLYTAMITAYAS+PD KAA LLYRNMVRRG P PNHFIYPHVLKS
Sbjct: 61 CYSRFIFDHLSSPNVYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPE+LESNGTKMVH QVLKSGFG YPVVQTAIVD+YSR +DIG ARQVFDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLG++D+AM LFESMPERD+PAWNALIAGCAQNGF EAI LFKRMVSLAL
Sbjct: 181 WTAMISGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EG NKERE KPNKIT+ASALS+CGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG
Sbjct: 241 EG--NKERETKPNKITVASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF ELVQC D V+P+AVTF
Sbjct: 301 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYFKMMR+DYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDP NGGYRIMLANIYAE + WDEVRK
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRK 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YK PGCSWIEVDN V +FYSFDM+HP+AEQIYKTLESMI FM
Sbjct: 481 VRKLLKEQNAYKIPGCSWIEVDNHVYQFYSFDMSHPNAEQIYKTLESMIIFM 530
BLAST of HG10003594 vs. ExPASy TrEMBL
Match:
A0A6J1EQ76 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3662 GN=LOC111436680 PE=4 SV=1)
HSP 1 Score: 977.6 bits (2526), Expect = 2.0e-281
Identity = 472/532 (88.72%), Postives = 500/532 (93.98%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
MAS+PIQP+LNQLVL+ LEKCSHLNHLKQLQGFLISLG SQTQF+AFKLVRFCNLTL DL
Sbjct: 1 MASLPIQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGQSQTQFYAFKLVRFCNLTLTDL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CY+RFIFD+L+SPNVYLYTAMITAYAS+ D KAA LLYRNMVRRGDP PNHFIYPHVLKS
Sbjct: 61 CYSRFIFDHLSSPNVYLYTAMITAYASELDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPE+LESNGTKMVH QVLKSGFG YPVVQTAIVD+YSR ++IG ARQVFDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTEIGIARQVFDEMLERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAM+SGYARLG++D+AM LFESMPERD+PAWNALIAGCAQNGF EAI LFKRMVSLAL
Sbjct: 181 WTAMVSGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EG NKERE KPNKIT+ASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG
Sbjct: 241 EG--NKERETKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF ELVQCGD VKP+ VTF
Sbjct: 301 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCGDGVKPDGVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYFKMMR+DYDIEP+IEHFGCLIDLLGRAGRFEEAMEVV+GMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDP NGGYRIMLANIYAE + WDEVR+
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRR 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YK PGCSWIEVDNQV +FYSFDM+HP+AEQIYKTLESMI FM
Sbjct: 481 VRKLLKEQNAYKIPGCSWIEVDNQVYQFYSFDMSHPNAEQIYKTLESMIIFM 530
BLAST of HG10003594 vs. ExPASy TrEMBL
Match:
A0A6J1DQX1 (pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=3673 GN=LOC111022983 PE=4 SV=1)
HSP 1 Score: 955.7 bits (2469), Expect = 8.3e-275
Identity = 462/532 (86.84%), Postives = 495/532 (93.05%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
MASVPIQP+LNQLVL+ LEKCSHLNHLKQ+QGFLISLGHSQTQFFAFKLVRFCNLTLA+L
Sbjct: 1 MASVPIQPHLNQLVLSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
YARFIFD L SPNVYLYTAMITAYASQPD KAA +LYR+MVRRG PRPNHFIYPHVLKS
Sbjct: 61 SYARFIFDQLNSPNVYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CPEV ESN T+MVH Q+LKSGFG+YPVVQTAIVDSYS+ SDIG ARQ+FDEM+ERSVVS
Sbjct: 121 CPEVXESNATQMVHAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGN+D A+ LFESMPERDVPAWNA+IAG AQNGF EAIWLF+RMVSLA+
Sbjct: 181 WTAMISGYARLGNIDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAM 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
E +++ERENKPNKIT+ASALSACGHTGMLHLGKWIHGYVFK+ L QDSFISNALLDMYG
Sbjct: 241 E--DDEERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKS-LSQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLK+A+RVFDMITLK+LTSWNSLINCLALHGHS SAIDLF +LV+CGD VKP+ VTF
Sbjct: 301 KCGNLKIAKRVFDMITLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMR+DY IEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFEMMRQDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE +KWDEVRK
Sbjct: 421 IEPDEVVWGSLLNGCKIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRK 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
VRKL K Q YKTPGCSWIEVDNQV +FYSFDM HPSAEQIYKTLES ISFM
Sbjct: 481 VRKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESXISFM 529
BLAST of HG10003594 vs. ExPASy TrEMBL
Match:
A0A5A7T7Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001540 PE=4 SV=1)
HSP 1 Score: 935.3 bits (2416), Expect = 1.2e-268
Identity = 455/504 (90.28%), Postives = 474/504 (94.05%), Query Frame = 0
Query: 1 MASVPIQPYLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
M+SV IQP+L QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 1 MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 60
Query: 61 CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKS 120
CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAA LLYRNMVR G RPNHFIYPHVLKS
Sbjct: 61 CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 120
Query: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVS 180
CP+VL SN TKMVHTQVLKSGFG+YPVVQTAIVDSYSR SS IGNARQ+FDEM+ERSVVS
Sbjct: 121 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 180
Query: 181 WTAMISGYARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLAL 240
WTAMISGYARLGN DSA+ELFESMPERDVPAWNALIAGCAQNGF EAIWLFK+MVSLAL
Sbjct: 181 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 240
Query: 241 EGNNNKERENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYG 300
EGNNN +RENKPNK TLASALSACG+TGMLHLGKWIHGYVFKTY GQDSFISNALLDMYG
Sbjct: 241 EGNNN-DRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYG 300
Query: 301 KCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTF 360
KCGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLFAELVQCGD VKP+ VTF
Sbjct: 301 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTF 360
Query: 361 VGVLNACTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
VGVLNACTHGGLVEKGYSYF+MMRRDYDIEP+IEHFGCLIDLLGRAGRFEEAMEVVRGMN
Sbjct: 361 VGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMN 420
Query: 421 IEPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRK 480
IEPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP NGGYRIMLANIYAE KWDEVRK
Sbjct: 421 IEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRK 480
Query: 481 VRKLFKGQTTYKTPGCSWIEVDNQ 505
VRKL K + YKTPGCSWIEVDNQ
Sbjct: 481 VRKLLKEKNAYKTPGCSWIEVDNQ 503
BLAST of HG10003594 vs. TAIR 10
Match:
AT1G33350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 599.0 bits (1543), Expect = 3.8e-171
Identity = 285/525 (54.29%), Postives = 372/525 (70.86%), Query Frame = 0
Query: 10 LNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDN 69
LNQ + A + K HLNHLKQ+Q F+I G S + F FKL+RFC L L +L YARFIFD
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 70 LTSPNVYLYTAMITAYASQ--PDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLES 129
+ PN +LY A++TAY+S +A +R MV R PRPNHFIYP VLKS P + +
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 130 NGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISG 189
T +VHT + KSGF Y VVQTA++ SY+ S I ARQ+FDEM ER+VVSWTAM+SG
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202
Query: 190 YARLGNVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKE 249
YAR G++ +A+ LFE MPERDVP+WNA++A C QNG EA+ LF+RM++ E
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN---------E 262
Query: 250 RENKPNKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKV 309
+PN++T+ LSAC TG L L K IH + ++ L D F+SN+L+D+YGKCGNL+
Sbjct: 263 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEE 322
Query: 310 ARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCG-DDVKPNAVTFVGVLNA 369
A VF M + K+LT+WNS+INC ALHG S AI +F E+++ +D+KP+ +TF+G+LNA
Sbjct: 323 ASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNA 382
Query: 370 CTHGGLVEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEV 429
CTHGGLV KG YF +M + IEP+IEH+GCLIDLLGRAGRF+EA+EV+ M ++ DE
Sbjct: 383 CTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEA 442
Query: 430 VWGSLLNGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFK 489
+WGSLLN CKIHG LDLAE +VK L+ ++P NGGY M+AN+Y E W+E R+ RK+ K
Sbjct: 443 IWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIK 502
Query: 490 GQTTYKTPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESMISF 532
Q YK PG S IE+DN+V +FYS D +HP E+IY L+S+ISF
Sbjct: 503 HQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
BLAST of HG10003594 vs. TAIR 10
Match:
AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 387.1 bits (993), Expect = 2.3e-107
Identity = 195/516 (37.79%), Postives = 309/516 (59.88%), Query Frame = 0
Query: 14 VLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSP 73
+++ L C ++ H+ + +I H Q F F+L+R C+ TL + YA +F +++P
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNP 91
Query: 74 NVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMV 133
NVYLYTAMI + S + LY M+ P++++ VLK+C + + +
Sbjct: 92 NVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVLKAC----DLKVCREI 151
Query: 134 HTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGN 193
H QVLK GFG V +++ Y + S ++ NA+++FDEM +R V+ T MI+ Y+ G
Sbjct: 152 HAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 211
Query: 194 VDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKEREN-KP 253
+ A+ELF+ + +D W A+I G +N +++A+ LF+ M + EN
Sbjct: 212 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM-----------QMENVSA 271
Query: 254 NKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVF 313
N+ T LSAC G L LG+W+H +V + +F+ NAL++MY +CG++ ARRVF
Sbjct: 272 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF 331
Query: 314 DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGL 373
++ K++ S+N++I+ LA+HG S AI+ F ++V G +PN VT V +LNAC+HGGL
Sbjct: 332 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG--FRPNQVTLVALLNACSHGGL 391
Query: 374 VEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLL 433
++ G F M+R +++EP+IEH+GC++DLLGR GR EEA + + IEPD ++ G+LL
Sbjct: 392 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 451
Query: 434 NGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYK 493
+ CKIHG ++L E K+L E + + G ++L+N+YA KW E ++R+ + K
Sbjct: 452 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 511
Query: 494 TPGCSWIEVDNQVSRFYSFDMAHPSAEQIYKTLESM 529
PGCS IEVDNQ+ F D+AHP E IY+ L+ +
Sbjct: 512 EPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
BLAST of HG10003594 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 385.2 bits (988), Expect = 8.6e-107
Identity = 195/513 (38.01%), Postives = 311/513 (60.62%), Query Frame = 0
Query: 18 LEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYL 77
L++ N K++ +I G SQ+ F K+V FC+ + D+ YA +F+ +++PNV+L
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76
Query: 78 YTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMVHTQV 137
Y ++I AY I +Y+ ++R+ P+ F +P + KSC + K VH +
Sbjct: 77 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136
Query: 138 LKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGNVDSA 197
K G + V + A++D Y + D+ +A +VFDEM ER V+SW +++SGYARLG + A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196
Query: 198 MELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKPNKITL 257
LF M ++ + +W A+I+G G EA+ F+ M +E P++I+L
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE----------PDEISL 256
Query: 258 ASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMITL 317
S L +C G L LGKWIH Y + + + + NAL++MY KCG + A ++F +
Sbjct: 257 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 316
Query: 318 KNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGLVEKGY 377
K++ SW+++I+ A HG++ AI+ F E+ + VKPN +TF+G+L+AC+H G+ ++G
Sbjct: 317 KDVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGL 376
Query: 378 SYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 437
YF MMR+DY IEPKIEH+GCLID+L RAG+ E A+E+ + M ++PD +WGSLL+ C+
Sbjct: 377 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 436
Query: 438 HGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYKTPGCS 497
G LD+A ++ L+E++P + G ++LANIYA+ KW++V ++RK+ + + KTPG S
Sbjct: 437 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 496
Query: 498 WIEVDNQVSRFYSFDMAHPSAEQIYKTLESMIS 531
IEV+N V F S D + P +I L+ S
Sbjct: 497 LIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTS 515
BLAST of HG10003594 vs. TAIR 10
Match:
AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 381.3 bits (978), Expect = 1.2e-105
Identity = 196/511 (38.36%), Postives = 312/511 (61.06%), Query Frame = 0
Query: 24 LNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYLYTAMIT 83
+N +KQL + G +T+ +L L + +L YAR +FD+ + +LY +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60
Query: 84 AYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKMVHTQVLKSGFG 143
AY P +I+LY N++ RP+H + + + + +++H+Q +SGF
Sbjct: 61 AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120
Query: 144 QYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLGNVDSAMELFES 203
T ++ +Y++L + + AR+VFDEM +R V W AMI+GY R G++ +AMELF+S
Sbjct: 121 SDSFCCTTLITAYAKLGA-LCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180
Query: 204 MPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKPNKITLASALSA 263
MP ++V +W +I+G +QNG SEA+ +F M K++ KPN IT+ S L A
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCM---------EKDKSVKPNHITVVSVLPA 240
Query: 264 CGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMI-TLKNLTS 323
C + G L +G+ + GY + + ++ NA ++MY KCG + VA+R+F+ + +NL S
Sbjct: 241 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 300
Query: 324 WNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGLVEKGYSYFKM 383
WNS+I LA HG A+ LFA++++ G+ KP+AVTFVG+L AC HGG+V KG FK
Sbjct: 301 WNSMIGSLATHGKHDEALTLFAQMLREGE--KPDAVTFVGLLLACVHGGMVVKGQELFKS 360
Query: 384 MRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRLD 443
M + I PK+EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL C HG ++
Sbjct: 361 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 420
Query: 444 LAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYKTPGCSW-IEV 503
+AE + + L +++P N G ++++NIYA ++KWD V ++RKL K +T K G S+ +EV
Sbjct: 421 IAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 480
Query: 504 DNQVSRFYSFDMAHPSAEQIYKTLESMISFM 533
V +F D +HP + +IY+ LE + M
Sbjct: 481 GVDVHKFTVEDKSHPRSYEIYQVLEEIFRRM 493
BLAST of HG10003594 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 374.8 bits (961), Expect = 1.2e-103
Identity = 187/509 (36.74%), Postives = 294/509 (57.76%), Query Frame = 0
Query: 15 LAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFC-NLTLAD-LCYARFIFDNLTS 74
++ L++CS LKQ+ ++ G Q + K + FC + T +D L YA+ +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 75 PNVYLYTAMITAYASQPDPKAAILLYRNMVRRGDPRPNHFIYPHVLKSCPEVLESNGTKM 134
P+ +L+ MI ++ +P+ ++LLY+ M+ P N + +P +LK+C + T
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQ 137
Query: 135 VHTQVLKSGFGQYPVVQTAIVDSYSRLSSDIGNARQVFDEMLERSVVSWTAMISGYARLG 194
+H Q+ K G+ ++++SY+ ++ + A +FD + E VSW ++I GY + G
Sbjct: 138 IHAQITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197
Query: 195 NVDSAMELFESMPERDVPAWNALIAGCAQNGFLSEAIWLFKRMVSLALEGNNNKERENKP 254
+D A+ LF M E++ +W +I+G Q EA+ LF M + +E P
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE----------P 257
Query: 255 NKITLASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVF 314
+ ++LA+ALSAC G L GKWIH Y+ KT + DS + L+DMY KCG ++ A VF
Sbjct: 258 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 317
Query: 315 DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELVQCGDDVKPNAVTFVGVLNACTHGGL 374
I K++ +W +LI+ A HGH AI F E+ + G +KPN +TF VL AC++ GL
Sbjct: 318 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG--IKPNVITFTAVLTACSYTGL 377
Query: 375 VEKGYSYFKMMRRDYDIEPKIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLL 434
VE+G F M RDY+++P IEH+GC++DLLGRAG +EA ++ M ++P+ V+WG+LL
Sbjct: 378 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 437
Query: 435 NGCKIHGRLDLAEYSVKKLIEMDPGNGGYRIMLANIYAEHKKWDEVRKVRKLFKGQTTYK 494
C+IH ++L E + LI +DP +GG + ANI+A KKWD+ + R+L K Q K
Sbjct: 438 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 497
Query: 495 TPGCSWIEVDNQVSRFYSFDMAHPSAEQI 522
PGCS I ++ F + D +HP E+I
Sbjct: 498 VPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038889416.1 | 2.2e-293 | 92.67 | pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida] | [more] |
XP_008459497.1 | 1.3e-282 | 90.04 | PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo] | [more] |
XP_004141609.3 | 2.2e-282 | 89.47 | pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativus] | [more] |
XP_023521314.1 | 2.9e-282 | 89.10 | pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp... | [more] |
XP_022974048.1 | 1.1e-281 | 89.10 | pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9C501 | 5.3e-170 | 54.29 | Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX... | [more] |
Q9FIF7 | 3.2e-106 | 37.79 | Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS... | [more] |
Q9SIL5 | 1.2e-105 | 38.01 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FNN7 | 1.7e-104 | 38.36 | Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 1.6e-102 | 36.74 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CAA7 | 6.3e-283 | 90.04 | pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1IF22 | 5.4e-282 | 89.10 | pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1EQ76 | 2.0e-281 | 88.72 | pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1DQX1 | 8.3e-275 | 86.84 | pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=... | [more] |
A0A5A7T7Y7 | 1.2e-268 | 90.28 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G33350.1 | 3.8e-171 | 54.29 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G59200.1 | 2.3e-107 | 37.79 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 8.6e-107 | 38.01 | mitochondrial editing factor 21 | [more] |
AT5G08510.1 | 1.2e-105 | 38.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G66520.1 | 1.2e-103 | 36.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |