HG10003541 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003541
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Chloroplast envelope membrane protein
Location	Chr08: 3009878 .. 3010567 (+)
RNA-Seq Expression	HG10003541
Synteny	HG10003541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTATTTTTGCCCTGGTGGATCTCTCTTTCATTTAATAAAAGCCTAGAATCTTGGGTTACTAATTGGTGGAATACTGGTCAATCCGAAATTTTTTTGAATGATATTCAAGAAAAGAGTATTATAAAAAAAGTTATAGAATTAGAGGAACTCTTTCTCTTGGACGAAATGCTAAAGGAATACCCAGAAACACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTATTAACTGATTTATGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGCCTTGTTTCCACTTTTCCAGTCATTCTTGACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTGA

mRNA sequence

ATGGCAAAAAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTATTTTTGCCCTGGTGGATCTCTCTTTCATTTAATAAAAGCCTAGAATCTTGGGTTACTAATTGGTGGAATACTGGTCAATCCGAAATTTTTTTGAATGATATTCAAGAAAAGAGTATTATAAAAAAAGTTATAGAATTAGAGGAACTCTTTCTCTTGGACGAAATGCTAAAGGAATACCCAGAAACACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTATTAACTGATTTATGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGCCTTGTTTCCACTTTTCCAGTCATTCTTGACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTGA

Coding sequence (CDS)

ATGGCAAAAAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTATTTTTGCCCTGGTGGATCTCTCTTTCATTTAATAAAAGCCTAGAATCTTGGGTTACTAATTGGTGGAATACTGGTCAATCCGAAATTTTTTTGAATGATATTCAAGAAAAGAGTATTATAAAAAAAGTTATAGAATTAGAGGAACTCTTTCTCTTGGACGAAATGCTAAAGGAATACCCAGAAACACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTATTAACTGATTTATGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGCCTTGTTTCCACTTTTCCAGTCATTCTTGACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTGA

Protein sequence

MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKVIELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVILSGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND

Homology

[Close]

BLAST of HG10003541 vs. NCBI nr
Match: YP_009456158.1 (envelope membrane protein [Lagenaria siceraria] >YP_009752847.1 envelope membrane carbon uptake protein [Baijiania yunnanensis] >QNM38543.1 chloroplast envelope membrane protein [Lagenaria siceraria var. microcarpa] >AHM88703.1 chloroplast envelope membrane protein [Lagenaria siceraria] >AHM88935.1 chloroplast envelope membrane protein [Lagenaria siceraria] >AHM88993.1 chloroplast envelope membrane protein [Lagenaria siceraria] >AHM89052.1 chloroplast envelope membrane protein [Lagenaria siceraria])

HSP 1 Score: 460.7 bits (1184), Expect = 7.4e-126
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. NCBI nr
Match: YP_009752002.1 (envelope membrane carbon uptake protein [Cionosicys macranthus] >QIT05243.1 envelope membrane carbon uptake protein [Cionosicys macranthus])

HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125
Identity = 227/229 (99.13%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICF+IL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELM+GSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMVGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. NCBI nr
Match: YP_010131106.1 (envelope membrane protein [Benincasa hispida] >QPZ75753.1 envelope membrane protein [Benincasa hispida] >QSQ72322.1 envelope membrane carbon uptake protein [Benincasa hispida])

HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIF+NDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFVNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. NCBI nr
Match: YP_009326001.1 (envelope membrane protein [Citrullus lanatus] >YP_009348043.1 envelope membrane protein [Citrullus mucosospermus] >YP_009420806.1 envelope membrane protein [Citrullus colocynthis] >YP_009431569.1 envelope membrane protein [Citrullus amarus] >YP_009431654.1 envelope membrane protein [Citrullus rehmii] >APW82473.1 envelope membrane protein [Citrullus lanatus subsp. vulgaris] >QZL38693.1 envelope membrane carbon uptake protein [Citrullus ecirrhosus] >APD52492.1 envelope membrane protein [Citrullus lanatus] >APW82558.1 envelope membrane protein [Citrullus lanatus subsp. vulgaris] >APW82643.1 envelope membrane protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 458.8 bits (1179), Expect = 2.8e-125
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVT+WWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTDWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. NCBI nr
Match: YP_009752339.1 (envelope membrane carbon uptake protein [Bryonia marmorata] >QIT04313.1 envelope membrane carbon uptake protein [Bryonia marmorata])

HSP 1 Score: 458.4 bits (1178), Expect = 3.7e-125
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWN GQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNIGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy Swiss-Prot
Match: Q2QD77 (Chloroplast envelope membrane protein OS=Cucumis sativus OX=3659 GN=cemA PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 222/229 (96.94%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           M KKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSE FLNDIQEKSIIKKV
Sbjct: 1   MEKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSENFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           +ELEELFLLDEMLKEYPETHLQKLRI I KETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  LELEELFLLDEMLKEYPETHLQKLRIAISKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIIS LVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHS+ND
Sbjct: 181 FGFSHNDQIISSLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSLND 229

[Close]

BLAST of HG10003541 vs. ExPASy Swiss-Prot
Match: Q2L922 (Chloroplast envelope membrane protein OS=Gossypium hirsutum OX=3635 GN=cemA PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 2.8e-120
Identity = 210/229 (91.70%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAF PLLYLASIVFLPWWISLSFNKSL+SW+TNWW+T QSE FLNDIQEKSI+++ 
Sbjct: 1   MAKKKAFTPLLYLASIVFLPWWISLSFNKSLKSWITNWWDTRQSETFLNDIQEKSILEQF 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IE+EELFLLDEM+KEYPETHLQKLRIGI KETIQLIK+HNED IHTILHFSTN+ICFVIL
Sbjct: 61  IEVEELFLLDEMIKEYPETHLQKLRIGIQKETIQLIKLHNEDHIHTILHFSTNLICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEEL+ILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS+YKD
Sbjct: 121 SGYSILGNEELLILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSIYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGF+HNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFAHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy Swiss-Prot
Match: A0ZZ47 (Chloroplast envelope membrane protein OS=Gossypium barbadense OX=3634 GN=cemA PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 8.3e-120
Identity = 209/229 (91.27%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAF PLLYLASIVFLPWWISLSFNKSL+SW+TNWW+T QSE FLNDIQEKSI+++ 
Sbjct: 1   MAKKKAFTPLLYLASIVFLPWWISLSFNKSLKSWITNWWDTRQSETFLNDIQEKSILEQF 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IE+EELFLLDEM+KEYPETHLQKLRIGI KETIQLIK+HNED IHTILHFSTN+ICFVIL
Sbjct: 61  IEVEELFLLDEMIKEYPETHLQKLRIGIQKETIQLIKLHNEDHIHTILHFSTNLICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEEL+ILNSW QEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS+YKD
Sbjct: 121 SGYSILGNEELLILNSWAQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSIYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGF+HNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFTHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy Swiss-Prot
Match: Q0ZJ08 (Chloroplast envelope membrane protein OS=Vitis vinifera OX=29760 GN=cemA PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-118
Identity = 210/229 (91.70%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           M KKKAF PLLYLASIVFLPWWISLS NKSLESWVTNWWNT QSE FLNDIQEKSI++K 
Sbjct: 1   MTKKKAFTPLLYLASIVFLPWWISLSLNKSLESWVTNWWNTRQSETFLNDIQEKSILEKF 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEM+KE PETHLQKLR+GI+KETIQLIKM+NED IHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMIKECPETHLQKLRMGIHKETIQLIKMYNEDPIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEEL+ILNSW+Q+FLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELLILNSWIQQFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGF+HNDQIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFAHNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy Swiss-Prot
Match: Q71E53 (Chloroplast envelope membrane protein OS=Fagus sylvatica OX=28930 GN=cemA PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 7.7e-118
Identity = 211/229 (92.14%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKA IPLLYLASIVFLPWWISLSF KSLESWVT+WW+TGQSEI LN IQEKSI+KK 
Sbjct: 1   MAKKKALIPLLYLASIVFLPWWISLSFTKSLESWVTDWWDTGQSEILLNAIQEKSILKKF 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEM+KEYPETHL+KLRIGIY ETIQLIKMHNED I+TILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMIKEYPETHLEKLRIGIYNETIQLIKMHNEDCIYTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           S YSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SSYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGF+H +QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFAHYEQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy TrEMBL
Match: X2F1U1 (envelope membrane protein, chloroplastic OS=Lagenaria siceraria OX=3668 GN=cemA PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy TrEMBL
Match: A0A6H0EWK0 (envelope membrane protein, chloroplastic OS=Baijiania yunnanensis OX=381650 GN=cemA PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy TrEMBL
Match: A0A7G9IT49 (envelope membrane protein, chloroplastic OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=cemA PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy TrEMBL
Match: A0A6H0ETF7 (envelope membrane protein, chloroplastic OS=Cionosicys macranthus OX=386150 GN=cemA PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126
Identity = 227/229 (99.13%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICF+IL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELM+GSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMVGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. ExPASy TrEMBL
Match: A0A7T3USS2 (Envelope membrane protein OS=Benincasa hispida OX=102211 GN=cemA PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.0e-126
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIF+NDIQEKSIIKKV
Sbjct: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFVNDIQEKSIIKKV 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL
Sbjct: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD
Sbjct: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND
Sbjct: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 229

[Close]

BLAST of HG10003541 vs. TAIR 10
Match: ATCG00530.1 (CemA-like proton extrusion protein-related )

HSP 1 Score: 380.9 bits (977), Expect = 7.0e-106
Identity = 185/229 (80.79%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 1   MAKKKAFIPLLYLASIVFLPWWISLSFNKSLESWVTNWWNTGQSEIFLNDIQEKSIIKKV 60
           MAKKKAFIP  Y  SIVFLPW ISL  NKSL++W+TNWWNT Q E FLNDIQEKS ++K 
Sbjct: 1   MAKKKAFIPFFYFLSIVFLPWLISLCCNKSLKTWITNWWNTRQCETFLNDIQEKSFLEKF 60

Query: 61  IELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVIL 120
           I+LEELF LDEM+KEYPET+LQ+ R+GI+KETIQ IK+HNE  IHTILHFSTN+I FVIL
Sbjct: 61  IQLEELFQLDEMIKEYPETNLQQFRLGIHKETIQFIKIHNEYNIHTILHFSTNLISFVIL 120

Query: 121 SGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 180
           SGYS  G E+L ILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIG +YKD
Sbjct: 121 SGYSFWGKEKLFILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGYIYKD 180

Query: 181 FGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 230
           FGF+H +QI+SGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYH++ND
Sbjct: 181 FGFAHYEQILSGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHAIND 229

[Close]

BLAST of HG10003541 vs. TAIR 10
Match: AT4G31040.1 (CemA-like proton extrusion protein-related )

HSP 1 Score: 72.4 bits (176), Expect = 5.3e-13
Identity = 39/114 (34.21%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 114 IICFVILSGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELM 173
           I  FV+L  Y+  G   L+    +  + + N+SDT KAF I+L+TD+ +G+HS  GWE +
Sbjct: 326 ISLFVLL--YANQGRVALLKFTGY--KIINNISDTGKAFLIILITDIFLGYHSESGWETL 385

Query: 174 IGSVYKDFGFSHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSM 228
           +  + + +G       I+  +   PVI+D   K W+F++L R+SP +  I+  M
Sbjct: 386 LEIIMEHYGLEVEQSTITIFICLVPVIMDACVKLWLFKFLPRLSPRVSNIFQEM 435

The following BLAST results are available for this feature:

BLAST of HG10003541 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009456158.1	7.4e-126	100.00	envelope membrane protein [Lagenaria siceraria] >YP_009752847.1 envelope membran...	[more]
YP_009752002.1	1.3e-125	99.13	envelope membrane carbon uptake protein [Cionosicys macranthus] >QIT05243.1 enve...	[more]
YP_010131106.1	1.7e-125	99.56	envelope membrane protein [Benincasa hispida] >QPZ75753.1 envelope membrane prot...	[more]
YP_009326001.1	2.8e-125	99.56	envelope membrane protein [Citrullus lanatus] >YP_009348043.1 envelope membrane ...	[more]
YP_009752339.1	3.7e-125	99.56	envelope membrane carbon uptake protein [Bryonia marmorata] >QIT04313.1 envelope...	[more]

BLAST of HG10003541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD77	2.5e-124	96.94	Chloroplast envelope membrane protein OS=Cucumis sativus OX=3659 GN=cemA PE=3 SV...	[more]
Q2L922	2.8e-120	91.70	Chloroplast envelope membrane protein OS=Gossypium hirsutum OX=3635 GN=cemA PE=3...	[more]
A0ZZ47	8.3e-120	91.27	Chloroplast envelope membrane protein OS=Gossypium barbadense OX=3634 GN=cemA PE...	[more]
Q0ZJ08	1.2e-118	91.70	Chloroplast envelope membrane protein OS=Vitis vinifera OX=29760 GN=cemA PE=3 SV...	[more]
Q71E53	7.7e-118	92.14	Chloroplast envelope membrane protein OS=Fagus sylvatica OX=28930 GN=cemA PE=3 S...	[more]

BLAST of HG10003541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
X2F1U1	3.6e-126	100.00	envelope membrane protein, chloroplastic OS=Lagenaria siceraria OX=3668 GN=cemA ...	[more]
A0A6H0EWK0	3.6e-126	100.00	envelope membrane protein, chloroplastic OS=Baijiania yunnanensis OX=381650 GN=c...	[more]
A0A7G9IT49	3.6e-126	100.00	envelope membrane protein, chloroplastic OS=Lagenaria siceraria var. microcarpa ...	[more]
A0A6H0ETF7	6.1e-126	99.13	envelope membrane protein, chloroplastic OS=Cionosicys macranthus OX=386150 GN=c...	[more]
A0A7T3USS2	8.0e-126	99.56	Envelope membrane protein OS=Benincasa hispida OX=102211 GN=cemA PE=4 SV=1	[more]

BLAST of HG10003541 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00530.1	7.0e-106	80.79	CemA-like proton extrusion protein-related	[more]
AT4G31040.1	5.3e-13	34.21	CemA-like proton extrusion protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004282	Chloroplast envelope membrane protein, CemA	PFAM	PF03040	CemA	coord: 3..229 e-value: 6.1E-76 score: 255.3
IPR004282	Chloroplast envelope membrane protein, CemA	PANTHER	PTHR33650	CHLOROPLAST ENVELOPE MEMBRANE PROTEIN-RELATED	coord: 1..229
IPR004282	Chloroplast envelope membrane protein, CemA	HAMAP	MF_01308	CemA	coord: 1..229 score: 34.960438
None	No IPR available	PANTHER	PTHR33650:SF2	CHLOROPLAST ENVELOPE MEMBRANE PROTEIN	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003541.1	HG10003541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015078	proton transmembrane transporter activity