HG10003483 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003483
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ribosomal RNA processing protein 36-like protein
Location	Chr08: 2106756 .. 2108551 (-)
RNA-Seq Expression	HG10003483
Synteny	HG10003483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGTATTTTTTTTTTATCAGTTAAATATATGCTTGTGTTACATTTTTTTAAAAGGAATTCTTTTATTTGCAAGTTCATGTTCACTGTATTGTATAGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGGTAGCTTGTGGATACTATTTTTGTTTTCTTGATTTATCTTTTACAACTTGGAAGTTAATGGAGTACATGATTGTATTTTCTTTGTGAAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGAGTTGGTTATTCCTTTTTTGTTAGTTTATTATCCAAATTTATGGCATTTGCATTGATTGTATGGAGCCAAGTTTACTGAACGATAATGGGATGACATCTCACTTTATGGAGTTCAAATGCAACCTAAGAAATAGTTACATCTCTATCTCCGCACTAACTGCAGCTTGTTTCATTGGTTATTTGTTGGTTTTCAGGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGGTGAGTTTTTCTTGACATGAGGTTTGACCAACTCTTTGACATGTTGAAAGGAATGCTGTCATCTAACATAAAAAAAAATTTGTTTTAAATTTTTATTCACGCTATTTACTTTATAATTATCTTCTTTGTTTGAAATTGTTATGGTTTGTTTTCATGTTTCTTTGAATCTTACAGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGTCTATACTTTTCCTTTTCCTTGATATATCCCTAATTGATATCATTTTTTTCAATTTTAGATTTGAAACCTAAATTTGACTAACCTGGATGCATTTTGTGTGTTGAAACTTTTACTGGTATGACAGGAATTGAAAAAACAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAGCAATTATCTTGGATTGTAAGTATAATTCTTTGGTTCATATGTAACGAGTCTAATATTCTTTTTGTTTAATTATGTAATGCCATAAAAAGAGGTGTTTTATAGTCTTTAGTGCTAAAAATGAAAGAAAAATTAGAATGAAATTTGTACTTGGAAAAAAGCTCAAACTTATTTTATAGGTTGACAAAAAATTTTACTTCATCATTACCAAGTTTTGTTTGATCATAATCTTATTATTTGTGCACACTGGTTTGCTGTATATAGATTTTAGATTGTTTTCATGTATTTTCAGGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATGTAAAACTTCTCTTCCTCTCTTTTTGAATGAGTCTTTCCCTCAAAGGTGTGCACTTAGGTGGCCTATGGTAATTATTTTCTAATAGTAGTCATGCAAGCGGGAGACCTTTGAACTTTGTACTTATGTGCTTGTGATTAGCCCACGATTAGCACAAGACATTAATATTTTAGCTGGGATTTAATTTGATAACTCTGAGTCGTAGAACACAGGCTTGGTGCTGATATTAACTTGCTTTCTAAGAAAGAGAAAAGAAAAGAAGAAAAAACCAGGCCTGGACATTAA

mRNA sequence

ATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAAAAACAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATGTAAAACTTCTCTTCCTCTCTTTTTGAATGAGTCTTTCCCTCAAAGGCTTGGTGCTGATATTAACTTGCTTTCTAAGAAAGAGAAAAGAAAAGAAGAAAAAACCAGGCCTGGACATTAA

Coding sequence (CDS)

ATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAAAAACAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATGTAAAACTTCTCTTCCTCTCTTTTTGAATGAGTCTTTCCCTCAAAGGCTTGGTGCTGATATTAACTTGCTTTCTAAGAAAGAGAAAAGAAAAGAAGAAAAAACCAGGCCTGGACATTAA

Protein sequence

MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEKRKEEKTRPGH

Homology

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BLAST of HG10003483 vs. NCBI nr
Match: KAE8648994.1 (hypothetical protein Csa_008922 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 4.3e-94
Identity = 190/201 (94.53%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           +EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKK GRA
Sbjct: 16  VEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKSGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSGTLD DGFKKRYSFIYE  LPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTSLPLFLNESFPQ 202
           PFYLKKCK SLPLFLN+SFPQ
Sbjct: 196 PFYLKKCKISLPLFLNDSFPQ 216

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BLAST of HG10003483 vs. NCBI nr
Match: XP_038889542.1 (ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 2.3e-87
Identity = 180/186 (96.77%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           MEEESED ESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSM+QKTKQEKKGGRA
Sbjct: 16  MEEESEDFESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMFQKTKQEKKGGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSGTLDVDGFKKRYSFIYEN LPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDVDGFKKRYSFIYENKLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNVVEELK QLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVVEELKNQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKK 187
           PFYLKK
Sbjct: 196 PFYLKK 201

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BLAST of HG10003483 vs. NCBI nr
Match: XP_008456647.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902001.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902002.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >KAA0031699.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa] >TYK04413.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 6.7e-87
Identity = 186/227 (81.94%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           MEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA
Sbjct: 16  MEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPK++VRDPRFESLSGTLDVDGFKKRYSFIYE NLPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYEKNLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTS----LPLFLNESFPQRLGADINLLSKKEKRKEEKTRP 224
           PFYLKK +      +  + N     +L A +    +K   K+ +  P
Sbjct: 196 PFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIP 242

[Close]

BLAST of HG10003483 vs. NCBI nr
Match: XP_004141535.1 (ribosomal RNA processing protein 36 homolog [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-85
Identity = 183/227 (80.62%), Postives = 194/227 (85.46%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           +EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKK GRA
Sbjct: 16  VEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKSGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSGTLD DGFKKRYSFIYE  LPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTS----LPLFLNESFPQRLGADINLLSKKEKRKEEKTRP 224
           PFYLKK +      +  + N     +L A +    +K   K+ +  P
Sbjct: 196 PFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIP 242

[Close]

BLAST of HG10003483 vs. NCBI nr
Match: XP_022973531.1 (ribosomal RNA processing protein 36 homolog [Cucurbita maxima])

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-81
Identity = 169/186 (90.86%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           ME+E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKT QEKKG RA
Sbjct: 16  MEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQEKKGRRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSS+KPV RFREVIQAPKN+VRDPRFESL+G+LDV+GFKKRYSFIYENNLPAE
Sbjct: 76  NKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYENNLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTND NVVEELKKQLSWIDKQFKSDSTKRVDA ILA HKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREAAKHGKK 195

Query: 181 PFYLKK 187
           PFYLKK
Sbjct: 196 PFYLKK 201

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BLAST of HG10003483 vs. ExPASy Swiss-Prot
Match: A6RKG5 (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.3e-20
Identity = 80/245 (32.65%), Postives = 127/245 (51.84%), Query Frame = 0


Query: 5   SEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQ----------- 64
           S++      D+ L   EE      A ++F  L +A++  S    + +K            
Sbjct: 50  SDEEVDDDDDEELSESEEEASNGAASISFGALAKAQATMSKPSKRDSKNLKKSNGDGWED 109

Query: 65  ----EKKGG--------RANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLD 124
               E+K G        R++KN P EVSS+K VSR REV+   K  +RDPRFE  +G +D
Sbjct: 110 NEATERKAGKKDQRDFTRSSKNAPTEVSSKKAVSRRREVVPVKKREIRDPRFEPTNGPVD 169

Query: 125 VDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDA 184
           +   +K Y F+ +     E ++LK+ +RKT D +  E+LK++L  ++ + K+D+ KR   
Sbjct: 170 MQKIEKNYDFLVDYR-EDEMKKLKETIRKTKDEDEKEKLKRELLRMESRKKTDARKRKAR 229

Query: 185 TILAKHKKKEREAAKHGKKPFYLKKCKTSLPLFLN---ESFPQRLGADINLLSKKEKRKE 224
            +L KH+K+E+E  K GK P+YLKK +    + L+   E   ++L   I    KK + KE
Sbjct: 230 EVLDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTFGELKGRQLDRVIERRRKKVEGKE 289

[Close]

BLAST of HG10003483 vs. ExPASy Swiss-Prot
Match: A7E4K0 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.6e-19
Identity = 79/248 (31.85%), Postives = 129/248 (52.02%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGG--- 61
           E  S++ E    +++ +SEEE      A ++F  L +A++  S    + +K+ KK     
Sbjct: 48  ESSSDETEDEVEEEASESEEETSNDAAASISFGALAKAQATMSKPSKRDSKKSKKSNADG 107

Query: 62  --------------------RANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSG 121
                               R++KN P E+SS+K VSR REV+   K  +RDPRF+   G
Sbjct: 108 WEDNEATERKAGKKDQRDFTRSSKNAPTEISSKKAVSRRREVVPVKKREIRDPRFDPTHG 167

Query: 122 TLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKR 181
            +D+   +K Y F+ +     E ++L+K ++KT D +  E+LK+ L  ++ + K+D+ KR
Sbjct: 168 PVDMGKIEKVYDFLVDYR-EDEIKKLRKTIKKTKDEDEKEKLKRDLLSMESRKKTDAKKR 227

Query: 182 VDATILAKHKKKEREAAKHGKKPFYLKKCKTSLPLFLN---ESFPQRLGADINLLSKKEK 224
               IL KH+K+E+E  K GK P+YLKK +    + L+   E   ++L   I    KK +
Sbjct: 228 KAREILDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTYGELKGRQLDRVIERRRKKVE 287

[Close]

BLAST of HG10003483 vs. ExPASy Swiss-Prot
Match: D5GA77 (rRNA biogenesis protein RRP36 OS=Tuber melanosporum (strain Mel28) OX=656061 GN=RRP36 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.6e-17
Identity = 66/180 (36.67%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 49  QKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAP----KNVVRDPRFE-SLSGTLDVD 108
           QKT++E K  R++K+ P E+SS++ V+R RE + AP        RDPRF+ ++ G  D  
Sbjct: 132 QKTREELK--RSSKHAPQEISSKRAVTRRREAV-APIIPAAQAARDPRFDTAVKGVYDEK 191

Query: 109 GFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATI 168
            F+K YSF+ ++    E + LK+++ K+ D    E+LKK+L  ++ + K++  K     +
Sbjct: 192 VFRKNYSFL-DDYREDEMKALKQEIFKSKDEQKREQLKKELLSMESRRKTEKNKEQGEKV 251

Query: 169 LAKHKKKEREAAKHGKKPFYLKKCKTSLPLFLNESFPQRLGADI-NLLSKKEKRKEEKTR 223
           + +H+K+ERE  K GKKPFYLKK +    L L E + +     +  +L KK KR  +K R
Sbjct: 252 VREHRKRERELIKQGKKPFYLKKAEQK-KLLLAEKYSKLNEKQLEKVLEKKRKRNSQKER 306

[Close]

BLAST of HG10003483 vs. ExPASy Swiss-Prot
Match: B6K8A0 (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rrp36 PE=3 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 6.4e-16
Identity = 77/246 (31.30%), Postives = 124/246 (50.41%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRAN 61
           E ES D  +  S++  D   E+ +R+L  + F EL  A+        + T  +K G + +
Sbjct: 37  EVESTDEANDESEEKTDL--ESTQRQLKSIPFSELLEAQRALKSEKVKFT--QKNGAKLS 96

Query: 62  KNR-----------------------PMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSG 121
           KNR                       P+E+SS++ V RFREV+  PK + RDPRF++LSG
Sbjct: 97  KNRRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVVHVPKPLRRDPRFDTLSG 156

Query: 122 TLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKR 181
            L+VD  K  Y F+ E  L +E ++L+++L+   +    E +K+ L  +  + +      
Sbjct: 157 NLNVDKVKNNYGFVMEYRL-SEIKQLEQELKSCREQERRERIKEALKSLRSKLERRKEDE 216

Query: 182 VDATILAKHKKKEREAAKHGKKPFYLKKC--KTSLPLFLNESFPQRLGADINLLSKKEKR 223
             A +L +H++ E+E  + GKKPFYLKK   K  L L   +S       D   + KK+KR
Sbjct: 217 RTARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSMEGTKALD-RYMEKKQKR 276

[Close]

BLAST of HG10003483 vs. ExPASy Swiss-Prot
Match: C7YTL6 (rRNA biogenesis protein RRP36 OS=Fusarium vanettenii (strain ATCC MYA-4622 / CBS 123669 / FGSC 9596 / NRRL 45880 / 77-13-4) OX=660122 GN=RRP36 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 73/248 (29.44%), Postives = 125/248 (50.40%), Query Frame = 0


Query: 3   EESEDLESSSSDDSLDSEEENIER----ELADVTFEELQRA---------RSDGSHSMYQ 62
           +E ED E S S++  + E E  E+    +L+ ++F  L +A         RS  S +  +
Sbjct: 52  DEDEDEEGSDSEEGSEEEPEPEEQTPKVDLSSISFGALAKAQATLPSTSRRSKSSKTATE 111

Query: 63  --------------KTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFES 122
                         ++K + K  R++K+ P E +S+KPVSR RE++   +   RDPRF+ 
Sbjct: 112 SSRTETTPAPRKSTRSKDDPKPKRSSKHAPQEQTSKKPVSRRREILPDNRRQYRDPRFDP 171

Query: 123 LSGTLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDS 182
           L G +D +   K Y+F+ E     E  +L+ Q++KT D    E++K+QL  ++ + K+  
Sbjct: 172 LVGKVDEEKASKAYAFLDEYR-EKEMSDLRAQIKKTKDTYAKEDMKRQLQAMESRKKARK 231

Query: 183 TKRVDATILAKHKKKEREAAKHGKKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEK 221
            K  +  +L +H+KKE+E    GK PFYLK+ +    + +        G     + +K K
Sbjct: 232 RKEEEENLLKEHRKKEKELVAQGKTPFYLKRSEQKKQILVKRYEGMSKGQVDRAIERKRK 291

[Close]

BLAST of HG10003483 vs. ExPASy TrEMBL
Match: A0A1S3C3C0 (ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496541 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 186/227 (81.94%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           MEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA
Sbjct: 16  MEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPK++VRDPRFESLSGTLDVDGFKKRYSFIYE NLPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYEKNLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTS----LPLFLNESFPQRLGADINLLSKKEKRKEEKTRP 224
           PFYLKK +      +  + N     +L A +    +K   K+ +  P
Sbjct: 196 PFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIP 242

[Close]

BLAST of HG10003483 vs. ExPASy TrEMBL
Match: A0A5A7SR00 (Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00090 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 186/227 (81.94%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           MEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA
Sbjct: 16  MEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPK++VRDPRFESLSGTLDVDGFKKRYSFIYE NLPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYEKNLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTS----LPLFLNESFPQRLGADINLLSKKEKRKEEKTRP 224
           PFYLKK +      +  + N     +L A +    +K   K+ +  P
Sbjct: 196 PFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIP 242

[Close]

BLAST of HG10003483 vs. ExPASy TrEMBL
Match: A0A0A0KUS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648700 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 183/227 (80.62%), Postives = 194/227 (85.46%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           +EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKK GRA
Sbjct: 16  VEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKSGRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSGTLD DGFKKRYSFIYE  LPAE
Sbjct: 76  NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDA ILAKHKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 195

Query: 181 PFYLKKCKTS----LPLFLNESFPQRLGADINLLSKKEKRKEEKTRP 224
           PFYLKK +      +  + N     +L A +    +K   K+ +  P
Sbjct: 196 PFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIP 242

[Close]

BLAST of HG10003483 vs. ExPASy TrEMBL
Match: A0A6J1I8W9 (ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472062 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 9.1e-82
Identity = 169/186 (90.86%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRA 60
           ME+E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKT QEKKG RA
Sbjct: 16  MEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQEKKGRRA 75

Query: 61  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAE 120
           NKNRPMEVSS+KPV RFREVIQAPKN+VRDPRFESL+G+LDV+GFKKRYSFIYENNLPAE
Sbjct: 76  NKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYENNLPAE 135

Query: 121 KEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKK 180
           KEELKKQLRKTND NVVEELKKQLSWIDKQFKSDSTKRVDA ILA HKKKEREAAKHGKK
Sbjct: 136 KEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREAAKHGKK 195

Query: 181 PFYLKK 187
           PFYLKK
Sbjct: 196 PFYLKK 201

[Close]

BLAST of HG10003483 vs. ExPASy TrEMBL
Match: A0A6J1CKR1 (ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LOC111012036 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 168/184 (91.30%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 3   EESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRANK 62
           EESEDLESSS +D +DSEEENIERELADVTFEELQRARSDGSHS YQKT QEKKGGRANK
Sbjct: 13  EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANK 72

Query: 63  NRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAEKE 122
           NRPMEVSS+KPVSRFREVIQAPKN+VRDPRFESLSGTLDV+GFKKRY+FIYENNLPAEKE
Sbjct: 73  NRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE 132

Query: 123 ELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDATILAKHKKKEREAAKHGKKPF 182
           ELKKQLRKTNDPNVVEELKKQ+ WIDKQFKSD+TKRVDA ILAKHK KEREAAK GKKPF
Sbjct: 133 ELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPF 192

Query: 183 YLKK 187
           YLKK
Sbjct: 193 YLKK 196

[Close]

BLAST of HG10003483 vs. TAIR 10
Match: AT1G12650.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-46
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGG--R 61
           E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q KK G  R
Sbjct: 17  EDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQVKKTGRAR 76

Query: 62  ANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPA 121
           ANKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLDV+GF+KRY+F +E+ LP 
Sbjct: 77  ANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFFFEDKLPV 136

Query: 122 EKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDATILAKHKKKEREAAKHG 181
           E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   A IL +HKKKEREAAK G
Sbjct: 137 EREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKEREAAKEG 196

Query: 182 KKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEKRKEEKTRPGH 226
           K+P+YLKK +      + +     L     L S  +KR+++     H
Sbjct: 197 KRPYYLKKSEIRKQTLIEKY--NSLKESGKLTSYLDKRRKKNATKDH 238

[Close]

BLAST of HG10003483 vs. TAIR 10
Match: AT1G12650.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-46
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGG--R 61
           E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q KK G  R
Sbjct: 17  EDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQVKKTGRAR 76

Query: 62  ANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPA 121
           ANKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLDV+GF+KRY+F +E+ LP 
Sbjct: 77  ANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFFFEDKLPV 136

Query: 122 EKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDATILAKHKKKEREAAKHG 181
           E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   A IL +HKKKEREAAK G
Sbjct: 137 EREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKEREAAKEG 196

Query: 182 KKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEKRKEEKTRPGH 226
           K+P+YLKK +      + +     L     L S  +KR+++     H
Sbjct: 197 KRPYYLKKSEIRKQTLIEKY--NSLKESGKLTSYLDKRRKKNATKDH 238

[Close]

BLAST of HG10003483 vs. TAIR 10
Match: AT1G12650.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-46
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGG--R 61
           E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q KK G  R
Sbjct: 17  EDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQVKKTGRAR 76

Query: 62  ANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPA 121
           ANKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLDV+GF+KRY+F +E+ LP 
Sbjct: 77  ANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFFFEDKLPV 136

Query: 122 EKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDATILAKHKKKEREAAKHG 181
           E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   A IL +HKKKEREAAK G
Sbjct: 137 EREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKEREAAKEG 196

Query: 182 KKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEKRKEEKTRPGH 226
           K+P+YLKK +      + +     L     L S  +KR+++     H
Sbjct: 197 KRPYYLKKSEIRKQTLIEKY--NSLKESGKLTSYLDKRRKKNATKDH 238

[Close]

BLAST of HG10003483 vs. TAIR 10
Match: AT1G12650.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-46
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 2   EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGG--R 61
           E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q KK G  R
Sbjct: 17  EDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQVKKTGRAR 76

Query: 62  ANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPA 121
           ANKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLDV+GF+KRY+F +E+ LP 
Sbjct: 77  ANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFFFEDKLPV 136

Query: 122 EKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDATILAKHKKKEREAAKHG 181
           E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   A IL +HKKKEREAAK G
Sbjct: 137 EREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKEREAAKEG 196

Query: 182 KKPFYLKKCKTSLPLFLNESFPQRLGADINLLSKKEKRKEEKTRPGH 226
           K+P+YLKK +      + +     L     L S  +KR+++     H
Sbjct: 197 KRPYYLKKSEIRKQTLIEKY--NSLKESGKLTSYLDKRRKKNATKDH 238

The following BLAST results are available for this feature:

BLAST of HG10003483 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648994.1	4.3e-94	94.53	hypothetical protein Csa_008922 [Cucumis sativus]	[more]
XP_038889542.1	2.3e-87	96.77	ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ...	[more]
XP_008456647.1	6.7e-87	81.94	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902...	[more]
XP_004141535.1	3.7e-85	80.62	ribosomal RNA processing protein 36 homolog [Cucumis sativus]	[more]
XP_022973531.1	1.9e-81	90.86	ribosomal RNA processing protein 36 homolog [Cucurbita maxima]	[more]

BLAST of HG10003483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6RKG5	7.3e-20	32.65	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=33264...	[more]
A7E4K0	3.6e-19	31.85	rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1...	[more]
D5GA77	7.6e-17	36.67	rRNA biogenesis protein RRP36 OS=Tuber melanosporum (strain Mel28) OX=656061 GN=...	[more]
B6K8A0	6.4e-16	31.30	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]
C7YTL6	2.4e-15	29.44	rRNA biogenesis protein RRP36 OS=Fusarium vanettenii (strain ATCC MYA-4622 / CBS...	[more]

BLAST of HG10003483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3C0	3.2e-87	81.94	ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A5A7SR00	3.2e-87	81.94	Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KUS3	1.8e-85	80.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648700 PE=3 SV=1	[more]
A0A6J1I8W9	9.1e-82	90.86	ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CKR1	2.7e-81	91.30	ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of HG10003483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12650.1	6.1e-46	49.78	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.2	6.1e-46	49.78	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.3	6.1e-46	49.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12650.4	6.1e-46	49.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	RRP36	coord: 59..220 e-value: 2.7E-36 score: 125.1
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 5..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003483.1	HG10003483.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0030686	90S preribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus