HG10003462 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003462
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 1776000 .. 1778075 (+)
RNA-Seq ExpressionHG10003462
SyntenyHG10003462
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTTCATCCTCCTTCATTCTCTCCCTTCATCTTCAGCCTTTCCCTCCACATCCTCTCGTCGCCGCCGCTATTTCCAATTCCGGCCACCAACTCTCCCCAATCAAATCCCCTACACAGTCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAACCGAAACCGCCCGGCTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGACGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACGATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACCGATGCGAAACAGATTCACGCGCATATTCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGGTCCTTGGAAGATGCACAGAGGCTGTTCGATGAAAGTTCTAGCAAGAGCATTTATGCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCGGGTCGGCGGGATTATCGTAGCATTCTATCGACTTATGCTGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGCTTTGCAGGTGCATCGGCGCTTACACAAGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGATTGGCAGTTCGATTCTTAGGACAAGTTTGGTTGATATGTACTTCAAATGTGGTAAGATCAAACTTGCTCGCCAGGTGTTTGAGGAAATTACCGAGAGGGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGGTAGACGATGGAATTAGACCGAATTCGGTTATATTGACGACGATTCTTCCTGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAAGGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGCGGGGACATCGGCTCGGGTAGAGCTGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACCGCTTTGATGTCTGGTTATGCTTTGAATGGCAGGCTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAGGAAGGATTTAGACCAGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTCAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTGTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATAGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCATTGTCCACATGAAGCAATTGGTATATTCAGAGCGATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAACTAAAGATGCTGAAGATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGCCGGTCCATTTCGTTTCTGCCGAACTAGTGAAGTTATATGGGAAATGTGGAGCAGCAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACTGCCATTATTGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTCTGGTATTTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTAGTTGATGATGCGATGCGCATCTTCAAGCTAATGTCTGTTAGGTATGAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTTCGATTCTTACTCGGTTTGGTCGAATCGAGGAGGCTAGAAGGTATGTACAGATGAGTTCTTCATTGTCATAA

mRNA sequence

ATGGAAATTTCATCCTCCTTCATTCTCTCCCTTCATCTTCAGCCTTTCCCTCCACATCCTCTCGTCGCCGCCGCTATTTCCAATTCCGGCCACCAACTCTCCCCAATCAAATCCCCTACACAGTCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAACCGAAACCGCCCGGCTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGACGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACGATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACCGATGCGAAACAGATTCACGCGCATATTCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGGTCCTTGGAAGATGCACAGAGGCTGTTCGATGAAAGTTCTAGCAAGAGCATTTATGCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCGGGTCGGCGGGATTATCGTAGCATTCTATCGACTTATGCTGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGCTTTGCAGGTGCATCGGCGCTTACACAAGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGATTGGCAGTTCGATTCTTAGGACAAGTTTGGTTGATATGTACTTCAAATGTGGTAAGATCAAACTTGCTCGCCAGGTGTTTGAGGAAATTACCGAGAGGGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGGTAGACGATGGAATTAGACCGAATTCGGTTATATTGACGACGATTCTTCCTGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAAGGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGCGGGGACATCGGCTCGGGTAGAGCTGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACCGCTTTGATGTCTGGTTATGCTTTGAATGGCAGGCTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAGGAAGGATTTAGACCAGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTCAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTGTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATAGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCATTGTCCACATGAAGCAATTGGTATATTCAGAGCGATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAACTAAAGATGCTGAAGATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGCCGGTCCATTTCGTTTCTGCCGAACTAGTGAAGTTATATGGGAAATGTGGAGCAGCAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACTGCCATTATTGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTCTGGTATTTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTAGTTGATGATGCGATGCGCATCTTCAAGCTAATGTCTGTTAGGTATGAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTTCGATTCTTACTCGGTTTGGTCGAATCGAGGAGGCTAGAAGGTATGTACAGATGAGTTCTTCATTGTCATAA

Coding sequence (CDS)

ATGGAAATTTCATCCTCCTTCATTCTCTCCCTTCATCTTCAGCCTTTCCCTCCACATCCTCTCGTCGCCGCCGCTATTTCCAATTCCGGCCACCAACTCTCCCCAATCAAATCCCCTACACAGTCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAACCGAAACCGCCCGGCTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGACGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACGATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACCGATGCGAAACAGATTCACGCGCATATTCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGGTCCTTGGAAGATGCACAGAGGCTGTTCGATGAAAGTTCTAGCAAGAGCATTTATGCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCGGGTCGGCGGGATTATCGTAGCATTCTATCGACTTATGCTGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGCTTTGCAGGTGCATCGGCGCTTACACAAGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGATTGGCAGTTCGATTCTTAGGACAAGTTTGGTTGATATGTACTTCAAATGTGGTAAGATCAAACTTGCTCGCCAGGTGTTTGAGGAAATTACCGAGAGGGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGGTAGACGATGGAATTAGACCGAATTCGGTTATATTGACGACGATTCTTCCTGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAAGGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGCGGGGACATCGGCTCGGGTAGAGCTGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACCGCTTTGATGTCTGGTTATGCTTTGAATGGCAGGCTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAGGAAGGATTTAGACCAGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTCAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTGTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATAGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCATTGTCCACATGAAGCAATTGGTATATTCAGAGCGATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAACTAAAGATGCTGAAGATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGCCGGTCCATTTCGTTTCTGCCGAACTAGTGAAGTTATATGGGAAATGTGGAGCAGCAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACTGCCATTATTGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTCTGGTATTTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTAGTTGATGATGCGATGCGCATCTTCAAGCTAATGTCTGTTAGGTATGAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTTCGATTCTTACTCGGTTTGGTCGAATCGAGGAGGCTAGAAGGTATGTACAGATGAGTTCTTCATTGTCATAA

Protein sequence

MEISSSFILSLHLQPFPPHPLVAAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS
Homology
BLAST of HG10003462 vs. NCBI nr
Match: XP_038889186.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa hispida])

HSP 1 Score: 1297.3 bits (3356), Expect = 0.0e+00
Identity = 653/691 (94.50%), Postives = 671/691 (97.11%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLVAAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRNR 60
           MEISSSFI SLHL PFPP+PL A AISNSG QLS IKS TQS TDTPPSK K+VSKFR +
Sbjct: 1   MEISSSFIPSLHLHPFPPNPL-AVAISNSGRQLSRIKSLTQSPTDTPPSKIKLVSKFRYK 60

Query: 61  NRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTF 120
           NRPAFAEKDAFPSSLPLHTKNPHAIY+DIQRFAR+NKLKEALTIMDYLDQQGIPVNATTF
Sbjct: 61  NRPAFAEKDAFPSSLPLHTKNPHAIYEDIQRFARKNKLKEALTIMDYLDQQGIPVNATTF 120

Query: 121 SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSS 180
           SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDESSS
Sbjct: 121 SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSS 180

Query: 181 KSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGL 240
           KSIY WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQGL
Sbjct: 181 KSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGL 240

Query: 241 KAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR 300
           K HGLLIKNGL+GSSIL TSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR
Sbjct: 241 KVHGLLIKNGLVGSSILGTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR 300

Query: 301 LQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ 360
           LQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ
Sbjct: 301 LQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ 360

Query: 361 SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR 420
           SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR
Sbjct: 361 SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR 420

Query: 421 PDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKL 480
           PDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDYSLKL
Sbjct: 421 PDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKL 480

Query: 481 FNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML 540
           FN +EQRNVILWTAMIDSYIEN CPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML
Sbjct: 481 FNAMEQRNVILWTAMIDSYIENECPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML 540

Query: 541 KMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAY 600
           KMGKEIHGQVLKRKFE VHFVSAELVKLYGKCGA KMAKMVFEAIPVKGSMTWTAIIEAY
Sbjct: 541 KMGKEIHGQVLKRKFESVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGSMTWTAIIEAY 600

Query: 601 GENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPS 660
           G+NGEF+EAIDLFDQMRSSGISPNHFTFKVVLS+CKEAG VDDAMRIFKLMSVRY+IKPS
Sbjct: 601 GDNGEFKEAIDLFDQMRSSGISPNHFTFKVVLSICKEAGFVDDAMRIFKLMSVRYKIKPS 660

Query: 661 EEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           EEHYSLVI++LTRFGRIEEARRY+QMSSS S
Sbjct: 661 EEHYSLVIAVLTRFGRIEEARRYIQMSSSFS 690

BLAST of HG10003462 vs. NCBI nr
Match: XP_008459588.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis melo])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 635/692 (91.76%), Postives = 662/692 (95.66%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK    S TD PP K KIVSKFRN
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELK+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YGENGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           SEEHYSLVI++LTRFGR+EEARRYVQMSSSLS
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARRYVQMSSSLS 688

BLAST of HG10003462 vs. NCBI nr
Match: XP_011656084.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sativus] >KGN52661.1 hypothetical protein Csa_008951 [Cucumis sativus])

HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 634/692 (91.62%), Postives = 662/692 (95.66%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLV-AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSFI+SLHLQPF P+ L  A AI NSGH+LS IK    S TDTPPSK KIVSKFRN
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAHGLLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPD+VTVATILPVCAQLRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSYIEN CPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           SEEHYSLVI+ILTRFGR+EEARRYVQM SSLS
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688

BLAST of HG10003462 vs. NCBI nr
Match: KAA0039287.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 628/683 (91.95%), Postives = 653/683 (95.61%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK    S TD PP K KIVSKFRN
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELKM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YG+NGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARR 683
           SEEHYSLVI+ILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARR 679

BLAST of HG10003462 vs. NCBI nr
Match: KAG7037161.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 601/694 (86.60%), Postives = 646/694 (93.08%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLV---AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
           MEISSSF LSLHL PFPP+PL    AAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1   MEISSSFTLSLHLHPFPPNPLAVAFAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60

Query: 61  RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
           +NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQQGIPVNA
Sbjct: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120

Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
           TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180

Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
           QGLKAH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
           HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCA+LRAL PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALEPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480

Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
           LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTVTM+RILYVCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVS+ELVKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSELVKLYGKCGAVKMAKMVFEAVPVKGAMTWTAII 600

Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
           EAYG NGE QEAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660

Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           K SEEHYS VI+ILTRFGRIEEA+RY QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKRYEQMSSSLS 694

BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match: Q9C9I3 (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 4.7e-251
Identity = 425/689 (61.68%), Postives = 542/689 (78.66%), Query Frame = 0

Query: 8   ILSLHLQPFPPHPLVAAAISNSGHQL----SPIKSPTQSLTDTPPSKFKIVSKFRNRNRP 67
           + SL ++  P    V  ++++  H+     +P KSP +      PS+ +  S    +   
Sbjct: 4   VSSLGIRDLPASLSVTTSLNHRPHRSDKDGAPAKSPIR------PSRTRRPSTSPAKKPK 63

Query: 68  AFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSL 127
            F E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L
Sbjct: 64  PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSAL 123

Query: 128 ITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSI 187
           + ACVR KS+   KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQ++FDES+S ++
Sbjct: 124 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 183

Query: 188 YAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAH 247
           Y+WNALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H
Sbjct: 184 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 243

Query: 248 GLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQR 307
            L IKNGL  S  L+TSLVDMYFKCGK+ LAR+VF+EI ERD+VVWG++IAG AHN+ Q 
Sbjct: 244 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQW 303

Query: 308 EALEYTRRMV-DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSA 367
           EAL   R M+ ++ I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K Y +Q F+ S 
Sbjct: 304 EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG 363

Query: 368 LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPD 427
           LID+YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPD
Sbjct: 364 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 423

Query: 428 VVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFN 487
           VVT+AT+LPVCA+LRA++ GKEIH YA+KN FLPNVS+V+SLMVMYSKCGV +Y ++LF+
Sbjct: 424 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 483

Query: 488 NIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKM 547
            +EQRNV  WTAMID Y+EN      I +FR M LSKHRPD+VTM R+L VCS+LK LK+
Sbjct: 484 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 543

Query: 548 GKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGE 607
           GKE+HG +LK++FE + FVSA ++K+YGKCG  + A   F+A+ VKGS+TWTAIIEAYG 
Sbjct: 544 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 603

Query: 608 NGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEE 667
           N  F++AI+ F+QM S G +PN FTF  VLS+C +AG VD+A R F LM   Y ++PSEE
Sbjct: 604 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 663

Query: 668 HYSLVISILTRFGRIEEARRYVQMSSSLS 692
           HYSLVI +L R GR+EEA+R   MSSS S
Sbjct: 664 HYSLVIELLNRCGRVEEAQRLAVMSSSSS 686

BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.8e-99
Identity = 195/598 (32.61%), Postives = 337/598 (56.35%), Query Frame = 0

Query: 89  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 148
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KS+ D K++   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 149 ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLRGTVMAGRRDYRSILSTY 208
             +  L ++L  MYT CG L++A R+FDE   +    WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 209 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLIGSSILRTSLVDMYFKC 268
            +M   GVE++ Y+F+ + KSF+   ++  G + HG ++K+G    + +  SLV  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 269 GKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMVDDGIRPNSVILTTIL 328
            ++  AR+VF+E+TERDV+ W SII G+  N L  + L    +M+  GI  +   + ++ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 329 PVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 388
               +     LG+ VH+  +K   +S++    + L+DMY KCGD+ S +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 389 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAQLRALRPGKEIHAY 448
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA+ R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 449 AVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRNVILWTAMIDSYIENHCPHEA 508
             +N    ++ + ++LM MY+KCG M  +  +F+ +  +++I W  +I  Y +N   +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 509 IGIFR-AMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVK 568
           + +F   ++  +  PD  T+A +L  C+ L     G+EIHG +++  +     V+  LV 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 569 LYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFT 628
           +Y KCGA  +A M+F+ I  K  ++WT +I  YG +G  +EAI LF+QMR +GI  +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 629 FKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVISILTRFGRIEEARRYVQ 686
           F  +L  C  +GLVD+  R F +M    +I+P+ EHY+ ++ +L R G + +A R+++
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660

BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.3e-96
Identity = 183/556 (32.91%), Postives = 313/556 (56.29%), Query Frame = 0

Query: 129 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 188
           R  S+ + +QI   +  NGL    F +T+LV ++   GS+++A R+F+   SK    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 189 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 248
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 249 NGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 308
           +G        T L +MY KC ++  AR+VF+ + ERD+V W +I+AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 309 TRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYC 368
            + M ++ ++P+ + + ++LP +  +    +G+E+H Y +++ G+   + I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 369 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 428
           KCG + + R +F   +ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 429 ILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRN 488
            L  CA L  L  G+ IH  +V+     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 489 VILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHG 548
           ++ W AMI  + +N  P +A+  F  M+    +PDT T   ++   +EL +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 549 QVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 608
            V++   +   FV+  LV +Y KCGA  +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 609 AIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVI 668
           A++LF++M+   I PN  TF  V+S C  +GLV+  ++ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 669 SILTRFGRIEEARRYV 685
            +L R GR+ EA  ++
Sbjct: 586 DLLGRAGRLNEAWDFI 598

BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 344.0 bits (881), Expect = 4.0e-93
Identity = 198/633 (31.28%), Postives = 333/633 (52.61%), Query Frame = 0

Query: 72  PSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ--QGIPVNATTFSSLITACVR 131
           PS     +++P    D ++   R N L+EA  ++ Y+D    GI  +   F +L+ A   
Sbjct: 52  PSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVAD 111

Query: 132 TKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 191
            + M   KQIHAH+   G   ++  +   LV++Y  CG      ++FD  S ++  +WN+
Sbjct: 112 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 171

Query: 192 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAG---ASALTQGLKAHGL 251
           L+  + +     +   L  +  M    VE + ++  +++ + +       L  G + H  
Sbjct: 172 LI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 231

Query: 252 LIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREA 311
            ++ G + S I+ T LV MY K GK+  ++ +      RD+V W ++++    N    EA
Sbjct: 232 GLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 291

Query: 312 LEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALID 371
           LEY R MV +G+ P+   ++++LP    +   R G+E+HAY +K     +  F+ SAL+D
Sbjct: 292 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 351

Query: 372 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVV 431
           MYC C  + SGR VF    +R    W A+++GY+ N   ++A+   I M++  G   +  
Sbjct: 352 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 411

Query: 432 TVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNI 491
           T+A ++P C +  A    + IH + VK     +  + ++LM MYS+ G +D ++++F  +
Sbjct: 412 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 471

Query: 492 EQRNVILWTAMIDSYIENHCPHEAIGIFRAMQ-----LSKH------RPDTVTMARILYV 551
           E R+++ W  MI  Y+ +    +A+ +   MQ     +SK       +P+++T+  IL  
Sbjct: 472 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 531

Query: 552 CSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTW 611
           C+ L  L  GKEIH   +K        V + LV +Y KCG  +M++ VF+ IP K  +TW
Sbjct: 532 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 591

Query: 612 TAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSV 671
             II AYG +G  QEAIDL   M   G+ PN  TF  V + C  +G+VD+ +RIF +M  
Sbjct: 592 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 651

Query: 672 RYEIKPSEEHYSLVISILTRFGRIEEARRYVQM 687
            Y ++PS +HY+ V+ +L R GRI+EA + + M
Sbjct: 652 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679

BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match: Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.4e-90
Identity = 182/617 (29.50%), Postives = 330/617 (53.48%), Query Frame = 0

Query: 73  SSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ-QGIPVNATTFSSLITACVRTK 132
           SS+    K    + D I    + N  +EAL   D+  +     +   T+ SLI AC  ++
Sbjct: 22  SSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81

Query: 133 SMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLR 192
           S+   ++IH HI  +  + +  L   ++ MY  CGSL DA+ +FD    +++ ++ +++ 
Sbjct: 82  SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141

Query: 193 GTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGL 252
           G    G+      +  Y +M +  +  + ++F +IIK+ A +S +  G + H  +IK   
Sbjct: 142 GYSQNGQG--AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 201

Query: 253 IGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRR 312
               I + +L+ MY +  ++  A +VF  I  +D++ W SIIAGF+    + EAL + + 
Sbjct: 202 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 261

Query: 313 MVDDGI-RPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKC 372
           M+  G+  PN  I  + L     +     G ++H   IK++  +       +L DMY +C
Sbjct: 262 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARC 321

Query: 373 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATIL 432
           G + S R VF      +   W  +++G A NG  ++AV     M+  GF PD +++ ++L
Sbjct: 322 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 381

Query: 433 PVCAQLR--ALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQR- 492
             CAQ +  AL  G +IH+Y +K  FL ++++ +SL+ MY+ C  +     LF +     
Sbjct: 382 --CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 441

Query: 493 NVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIH 552
           + + W  ++ + +++  P E + +F+ M +S+  PD +TM  +L  C E+  LK+G ++H
Sbjct: 442 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 501

Query: 553 GQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQ 612
              LK    P  F+   L+ +Y KCG+   A+ +F+++  +  ++W+ +I  Y ++G  +
Sbjct: 502 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 561

Query: 613 EAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLV 672
           EA+ LF +M+S+GI PNH TF  VL+ C   GLV++ ++++  M   + I P++EH S V
Sbjct: 562 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 621

Query: 673 ISILTRFGRIEEARRYV 685
           + +L R GR+ EA R++
Sbjct: 622 VDLLARAGRLNEAERFI 633

BLAST of HG10003462 vs. ExPASy TrEMBL
Match: A0A1S3CBS1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498672 PE=4 SV=1)

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 635/692 (91.76%), Postives = 662/692 (95.66%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK    S TD PP K KIVSKFRN
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELK+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YGENGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           SEEHYSLVI++LTRFGR+EEARRYVQMSSSLS
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARRYVQMSSSLS 688

BLAST of HG10003462 vs. ExPASy TrEMBL
Match: A0A0A0KXW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1)

HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 634/692 (91.62%), Postives = 662/692 (95.66%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLV-AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSFI+SLHLQPF P+ L  A AI NSGH+LS IK    S TDTPPSK KIVSKFRN
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAHGLLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPD+VTVATILPVCAQLRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSYIEN CPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           SEEHYSLVI+ILTRFGR+EEARRYVQM SSLS
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688

BLAST of HG10003462 vs. ExPASy TrEMBL
Match: A0A5A7TCH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00800 PE=4 SV=1)

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 628/683 (91.95%), Postives = 653/683 (95.61%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
           MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK    S TD PP K KIVSKFRN
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
           RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480

Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
           LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELKM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540

Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
           YG+NGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVISILTRFGRIEEARR 683
           SEEHYSLVI+ILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARR 679

BLAST of HG10003462 vs. ExPASy TrEMBL
Match: A0A6J1G986 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452099 PE=4 SV=1)

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 599/694 (86.31%), Postives = 647/694 (93.23%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPL---VAAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
           MEISSSF LSLHL PFPP+PL   VAAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60

Query: 61  RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
           +NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQ+GIPVNA
Sbjct: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120

Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
           TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180

Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
           QGLKAH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
           HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480

Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
           LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTVTM+RILYVCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVS+E+VKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600

Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
           EAYG NGE QEAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660

Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           K SEEHYS VI+ILTRFGRIEEA+ Y QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 694

BLAST of HG10003462 vs. ExPASy TrEMBL
Match: A0A6J1IBE8 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471998 PE=4 SV=1)

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 596/694 (85.88%), Postives = 647/694 (93.23%), Query Frame = 0

Query: 1   MEISSSFILSLHLQPFPPHPLV---AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
           MEISSSF LSLHLQPFPP+PL    AAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1   MEISSSFTLSLHLQPFPPNPLAVAFAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60

Query: 61  RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
           +NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQ+GIP NA
Sbjct: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPANA 120

Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
           TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180

Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
           QGL+AH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLRAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
           HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YSK I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSKLI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGV+DYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVLDYS 480

Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
           LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTV M+RIL+VCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVAMSRILFVCSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVS++LVKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSKLVKLYGKCGAVKMAKMVFEAVPVKGAMTWTAII 600

Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
           EAYG NGE +EAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELEEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660

Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
           K SEEHYS VI+ILTRFGRIEEA+RY QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKRYEQMSSSLS 694

BLAST of HG10003462 vs. TAIR 10
Match: AT1G71460.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 868.6 bits (2243), Expect = 3.3e-252
Identity = 425/689 (61.68%), Postives = 542/689 (78.66%), Query Frame = 0

Query: 8   ILSLHLQPFPPHPLVAAAISNSGHQL----SPIKSPTQSLTDTPPSKFKIVSKFRNRNRP 67
           + SL ++  P    V  ++++  H+     +P KSP +      PS+ +  S    +   
Sbjct: 4   VSSLGIRDLPASLSVTTSLNHRPHRSDKDGAPAKSPIR------PSRTRRPSTSPAKKPK 63

Query: 68  AFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSL 127
            F E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L
Sbjct: 64  PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSAL 123

Query: 128 ITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSI 187
           + ACVR KS+   KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQ++FDES+S ++
Sbjct: 124 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 183

Query: 188 YAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAH 247
           Y+WNALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H
Sbjct: 184 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 243

Query: 248 GLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQR 307
            L IKNGL  S  L+TSLVDMYFKCGK+ LAR+VF+EI ERD+VVWG++IAG AHN+ Q 
Sbjct: 244 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQW 303

Query: 308 EALEYTRRMV-DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSA 367
           EAL   R M+ ++ I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K Y +Q F+ S 
Sbjct: 304 EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG 363

Query: 368 LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPD 427
           LID+YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPD
Sbjct: 364 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 423

Query: 428 VVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFN 487
           VVT+AT+LPVCA+LRA++ GKEIH YA+KN FLPNVS+V+SLMVMYSKCGV +Y ++LF+
Sbjct: 424 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 483

Query: 488 NIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKM 547
            +EQRNV  WTAMID Y+EN      I +FR M LSKHRPD+VTM R+L VCS+LK LK+
Sbjct: 484 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 543

Query: 548 GKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGE 607
           GKE+HG +LK++FE + FVSA ++K+YGKCG  + A   F+A+ VKGS+TWTAIIEAYG 
Sbjct: 544 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 603

Query: 608 NGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEE 667
           N  F++AI+ F+QM S G +PN FTF  VLS+C +AG VD+A R F LM   Y ++PSEE
Sbjct: 604 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 663

Query: 668 HYSLVISILTRFGRIEEARRYVQMSSSLS 692
           HYSLVI +L R GR+EEA+R   MSSS S
Sbjct: 664 HYSLVIELLNRCGRVEEAQRLAVMSSSSS 686

BLAST of HG10003462 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 364.0 bits (933), Expect = 2.7e-100
Identity = 195/598 (32.61%), Postives = 337/598 (56.35%), Query Frame = 0

Query: 89  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 148
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KS+ D K++   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 149 ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLRGTVMAGRRDYRSILSTY 208
             +  L ++L  MYT CG L++A R+FDE   +    WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 209 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLIGSSILRTSLVDMYFKC 268
            +M   GVE++ Y+F+ + KSF+   ++  G + HG ++K+G    + +  SLV  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 269 GKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMVDDGIRPNSVILTTIL 328
            ++  AR+VF+E+TERDV+ W SII G+  N L  + L    +M+  GI  +   + ++ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 329 PVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 388
               +     LG+ VH+  +K   +S++    + L+DMY KCGD+ S +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 389 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAQLRALRPGKEIHAY 448
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA+ R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 449 AVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRNVILWTAMIDSYIENHCPHEA 508
             +N    ++ + ++LM MY+KCG M  +  +F+ +  +++I W  +I  Y +N   +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 509 IGIFR-AMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVK 568
           + +F   ++  +  PD  T+A +L  C+ L     G+EIHG +++  +     V+  LV 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 569 LYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFT 628
           +Y KCGA  +A M+F+ I  K  ++WT +I  YG +G  +EAI LF+QMR +GI  +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 629 FKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVISILTRFGRIEEARRYVQ 686
           F  +L  C  +GLVD+  R F +M    +I+P+ EHY+ ++ +L R G + +A R+++
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660

BLAST of HG10003462 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 354.8 bits (909), Expect = 1.6e-97
Identity = 183/556 (32.91%), Postives = 313/556 (56.29%), Query Frame = 0

Query: 129 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 188
           R  S+ + +QI   +  NGL    F +T+LV ++   GS+++A R+F+   SK    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 189 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 248
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 249 NGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 308
           +G        T L +MY KC ++  AR+VF+ + ERD+V W +I+AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 309 TRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYC 368
            + M ++ ++P+ + + ++LP +  +    +G+E+H Y +++ G+   + I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 369 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 428
           KCG + + R +F   +ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 429 ILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRN 488
            L  CA L  L  G+ IH  +V+     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 489 VILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHG 548
           ++ W AMI  + +N  P +A+  F  M+    +PDT T   ++   +EL +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 549 QVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 608
            V++   +   FV+  LV +Y KCGA  +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 609 AIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVI 668
           A++LF++M+   I PN  TF  V+S C  +GLV+  ++ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 669 SILTRFGRIEEARRYV 685
            +L R GR+ EA  ++
Sbjct: 586 DLLGRAGRLNEAWDFI 598

BLAST of HG10003462 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 344.0 bits (881), Expect = 2.9e-94
Identity = 198/633 (31.28%), Postives = 333/633 (52.61%), Query Frame = 0

Query: 72  PSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ--QGIPVNATTFSSLITACVR 131
           PS     +++P    D ++   R N L+EA  ++ Y+D    GI  +   F +L+ A   
Sbjct: 52  PSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVAD 111

Query: 132 TKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 191
            + M   KQIHAH+   G   ++  +   LV++Y  CG      ++FD  S ++  +WN+
Sbjct: 112 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 171

Query: 192 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAG---ASALTQGLKAHGL 251
           L+  + +     +   L  +  M    VE + ++  +++ + +       L  G + H  
Sbjct: 172 LI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 231

Query: 252 LIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREA 311
            ++ G + S I+ T LV MY K GK+  ++ +      RD+V W ++++    N    EA
Sbjct: 232 GLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 291

Query: 312 LEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALID 371
           LEY R MV +G+ P+   ++++LP    +   R G+E+HAY +K     +  F+ SAL+D
Sbjct: 292 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 351

Query: 372 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVV 431
           MYC C  + SGR VF    +R    W A+++GY+ N   ++A+   I M++  G   +  
Sbjct: 352 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 411

Query: 432 TVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNI 491
           T+A ++P C +  A    + IH + VK     +  + ++LM MYS+ G +D ++++F  +
Sbjct: 412 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 471

Query: 492 EQRNVILWTAMIDSYIENHCPHEAIGIFRAMQ-----LSKH------RPDTVTMARILYV 551
           E R+++ W  MI  Y+ +    +A+ +   MQ     +SK       +P+++T+  IL  
Sbjct: 472 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 531

Query: 552 CSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTW 611
           C+ L  L  GKEIH   +K        V + LV +Y KCG  +M++ VF+ IP K  +TW
Sbjct: 532 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 591

Query: 612 TAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSV 671
             II AYG +G  QEAIDL   M   G+ PN  TF  V + C  +G+VD+ +RIF +M  
Sbjct: 592 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 651

Query: 672 RYEIKPSEEHYSLVISILTRFGRIEEARRYVQM 687
            Y ++PS +HY+ V+ +L R GRI+EA + + M
Sbjct: 652 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679

BLAST of HG10003462 vs. TAIR 10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 3.9e-91
Identity = 182/617 (29.50%), Postives = 330/617 (53.48%), Query Frame = 0

Query: 73  SSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ-QGIPVNATTFSSLITACVRTK 132
           SS+    K    + D I    + N  +EAL   D+  +     +   T+ SLI AC  ++
Sbjct: 22  SSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81

Query: 133 SMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLR 192
           S+   ++IH HI  +  + +  L   ++ MY  CGSL DA+ +FD    +++ ++ +++ 
Sbjct: 82  SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141

Query: 193 GTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGL 252
           G    G+      +  Y +M +  +  + ++F +IIK+ A +S +  G + H  +IK   
Sbjct: 142 GYSQNGQG--AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 201

Query: 253 IGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRR 312
               I + +L+ MY +  ++  A +VF  I  +D++ W SIIAGF+    + EAL + + 
Sbjct: 202 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 261

Query: 313 MVDDGI-RPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKC 372
           M+  G+  PN  I  + L     +     G ++H   IK++  +       +L DMY +C
Sbjct: 262 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARC 321

Query: 373 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATIL 432
           G + S R VF      +   W  +++G A NG  ++AV     M+  GF PD +++ ++L
Sbjct: 322 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 381

Query: 433 PVCAQLR--ALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQR- 492
             CAQ +  AL  G +IH+Y +K  FL ++++ +SL+ MY+ C  +     LF +     
Sbjct: 382 --CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 441

Query: 493 NVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIH 552
           + + W  ++ + +++  P E + +F+ M +S+  PD +TM  +L  C E+  LK+G ++H
Sbjct: 442 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 501

Query: 553 GQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQ 612
              LK    P  F+   L+ +Y KCG+   A+ +F+++  +  ++W+ +I  Y ++G  +
Sbjct: 502 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 561

Query: 613 EAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLV 672
           EA+ LF +M+S+GI PNH TF  VL+ C   GLV++ ++++  M   + I P++EH S V
Sbjct: 562 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 621

Query: 673 ISILTRFGRIEEARRYV 685
           + +L R GR+ EA R++
Sbjct: 622 VDLLARAGRLNEAERFI 633

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889186.10.0e+0094.50pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa ... [more]
XP_008459588.10.0e+0091.76PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
XP_011656084.10.0e+0091.62pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sa... [more]
KAA0039287.10.0e+0091.95pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472... [more]
KAG7037161.10.0e+0086.60Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q9C9I34.7e-25161.68Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidop... [more]
Q9SN393.8e-9932.61Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q3E6Q12.3e-9632.91Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q7Y2114.0e-9331.28Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9LFI15.4e-9029.50Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S3CBS10.0e+0091.76pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis ... [more]
A0A0A0KXW00.0e+0091.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1[more]
A0A5A7TCH10.0e+0091.95Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1G9860.0e+0086.31pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbit... [more]
A0A6J1IBE80.0e+0085.88pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT1G71460.13.3e-25261.68Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT4G18750.12.7e-10032.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G11290.11.6e-9732.91Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G57430.12.9e-9431.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G53360.13.9e-9129.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 447..550
e-value: 1.2E-16
score: 62.6
coord: 247..334
e-value: 4.5E-16
score: 60.7
coord: 336..446
e-value: 2.8E-18
score: 67.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 565..689
e-value: 9.7E-25
score: 89.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 83..246
e-value: 4.4E-23
score: 84.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 387..433
e-value: 1.7E-7
score: 31.3
coord: 589..635
e-value: 1.2E-12
score: 47.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 491..516
e-value: 0.0032
score: 17.6
coord: 259..285
e-value: 0.023
score: 14.9
coord: 287..317
e-value: 0.17
score: 12.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 104..149
e-value: 9.1E-4
score: 19.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 592..624
e-value: 9.8E-11
score: 39.2
coord: 626..660
e-value: 0.0015
score: 16.5
coord: 491..524
e-value: 4.0E-5
score: 21.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 10.742131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 488..522
score: 9.415814
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 10.424253
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 589..623
score: 13.044004
NoneNo IPR availablePANTHERPTHR47929:SF3PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTICcoord: 62..690
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 62..690

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003462.1HG10003462.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding