Homology
BLAST of HG10003462 vs. NCBI nr
Match:
XP_038889186.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa hispida])
HSP 1 Score: 1297.3 bits (3356), Expect = 0.0e+00
Identity = 653/691 (94.50%), Postives = 671/691 (97.11%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLVAAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRNR 60
MEISSSFI SLHL PFPP+PL A AISNSG QLS IKS TQS TDTPPSK K+VSKFR +
Sbjct: 1 MEISSSFIPSLHLHPFPPNPL-AVAISNSGRQLSRIKSLTQSPTDTPPSKIKLVSKFRYK 60
Query: 61 NRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTF 120
NRPAFAEKDAFPSSLPLHTKNPHAIY+DIQRFAR+NKLKEALTIMDYLDQQGIPVNATTF
Sbjct: 61 NRPAFAEKDAFPSSLPLHTKNPHAIYEDIQRFARKNKLKEALTIMDYLDQQGIPVNATTF 120
Query: 121 SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSS 180
SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDESSS
Sbjct: 121 SSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSS 180
Query: 181 KSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGL 240
KSIY WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQGL
Sbjct: 181 KSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGL 240
Query: 241 KAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR 300
K HGLLIKNGL+GSSIL TSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR
Sbjct: 241 KVHGLLIKNGLVGSSILGTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNR 300
Query: 301 LQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ 360
LQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ
Sbjct: 301 LQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQ 360
Query: 361 SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR 420
SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR
Sbjct: 361 SALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFR 420
Query: 421 PDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKL 480
PDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDYSLKL
Sbjct: 421 PDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKL 480
Query: 481 FNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML 540
FN +EQRNVILWTAMIDSYIEN CPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML
Sbjct: 481 FNAMEQRNVILWTAMIDSYIENECPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKML 540
Query: 541 KMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAY 600
KMGKEIHGQVLKRKFE VHFVSAELVKLYGKCGA KMAKMVFEAIPVKGSMTWTAIIEAY
Sbjct: 541 KMGKEIHGQVLKRKFESVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGSMTWTAIIEAY 600
Query: 601 GENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPS 660
G+NGEF+EAIDLFDQMRSSGISPNHFTFKVVLS+CKEAG VDDAMRIFKLMSVRY+IKPS
Sbjct: 601 GDNGEFKEAIDLFDQMRSSGISPNHFTFKVVLSICKEAGFVDDAMRIFKLMSVRYKIKPS 660
Query: 661 EEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
EEHYSLVI++LTRFGRIEEARRY+QMSSS S
Sbjct: 661 EEHYSLVIAVLTRFGRIEEARRYIQMSSSFS 690
BLAST of HG10003462 vs. NCBI nr
Match:
XP_008459588.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis melo])
HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 635/692 (91.76%), Postives = 662/692 (95.66%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK S TD PP K KIVSKFRN
Sbjct: 1 MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELK+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YGENGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
SEEHYSLVI++LTRFGR+EEARRYVQMSSSLS
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARRYVQMSSSLS 688
BLAST of HG10003462 vs. NCBI nr
Match:
XP_011656084.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sativus] >KGN52661.1 hypothetical protein Csa_008951 [Cucumis sativus])
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 634/692 (91.62%), Postives = 662/692 (95.66%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLV-AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSFI+SLHLQPF P+ L A AI NSGH+LS IK S TDTPPSK KIVSKFRN
Sbjct: 1 MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAHGLLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPD+VTVATILPVCAQLRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSYIEN CPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
SEEHYSLVI+ILTRFGR+EEARRYVQM SSLS
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688
BLAST of HG10003462 vs. NCBI nr
Match:
KAA0039287.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 628/683 (91.95%), Postives = 653/683 (95.61%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK S TD PP K KIVSKFRN
Sbjct: 1 MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELKM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YG+NGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARR 683
SEEHYSLVI+ILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARR 679
BLAST of HG10003462 vs. NCBI nr
Match:
KAG7037161.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 601/694 (86.60%), Postives = 646/694 (93.08%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLV---AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
MEISSSF LSLHL PFPP+PL AAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1 MEISSSFTLSLHLHPFPPNPLAVAFAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
Query: 61 RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
+NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQQGIPVNA
Sbjct: 61 QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
QGLKAH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
+IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
GFRPDVVTVATILPVCA+LRAL PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALEPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTVTM+RILYVCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
K+LKMGKEIHGQVLKR FE VHFVS+ELVKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSELVKLYGKCGAVKMAKMVFEAVPVKGAMTWTAII 600
Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
EAYG NGE QEAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
K SEEHYS VI+ILTRFGRIEEA+RY QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKRYEQMSSSLS 694
BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match:
Q9C9I3 (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A3 PE=2 SV=1)
HSP 1 Score: 868.6 bits (2243), Expect = 4.7e-251
Identity = 425/689 (61.68%), Postives = 542/689 (78.66%), Query Frame = 0
Query: 8 ILSLHLQPFPPHPLVAAAISNSGHQL----SPIKSPTQSLTDTPPSKFKIVSKFRNRNRP 67
+ SL ++ P V ++++ H+ +P KSP + PS+ + S +
Sbjct: 4 VSSLGIRDLPASLSVTTSLNHRPHRSDKDGAPAKSPIR------PSRTRRPSTSPAKKPK 63
Query: 68 AFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSL 127
F E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L
Sbjct: 64 PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSAL 123
Query: 128 ITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSI 187
+ ACVR KS+ KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQ++FDES+S ++
Sbjct: 124 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 183
Query: 188 YAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAH 247
Y+WNALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H
Sbjct: 184 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 243
Query: 248 GLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQR 307
L IKNGL S L+TSLVDMYFKCGK+ LAR+VF+EI ERD+VVWG++IAG AHN+ Q
Sbjct: 244 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQW 303
Query: 308 EALEYTRRMV-DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSA 367
EAL R M+ ++ I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K Y +Q F+ S
Sbjct: 304 EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG 363
Query: 368 LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPD 427
LID+YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPD
Sbjct: 364 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 423
Query: 428 VVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFN 487
VVT+AT+LPVCA+LRA++ GKEIH YA+KN FLPNVS+V+SLMVMYSKCGV +Y ++LF+
Sbjct: 424 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 483
Query: 488 NIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKM 547
+EQRNV WTAMID Y+EN I +FR M LSKHRPD+VTM R+L VCS+LK LK+
Sbjct: 484 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 543
Query: 548 GKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGE 607
GKE+HG +LK++FE + FVSA ++K+YGKCG + A F+A+ VKGS+TWTAIIEAYG
Sbjct: 544 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 603
Query: 608 NGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEE 667
N F++AI+ F+QM S G +PN FTF VLS+C +AG VD+A R F LM Y ++PSEE
Sbjct: 604 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 663
Query: 668 HYSLVISILTRFGRIEEARRYVQMSSSLS 692
HYSLVI +L R GR+EEA+R MSSS S
Sbjct: 664 HYSLVIELLNRCGRVEEAQRLAVMSSSSS 686
BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 364.0 bits (933), Expect = 3.8e-99
Identity = 195/598 (32.61%), Postives = 337/598 (56.35%), Query Frame = 0
Query: 89 IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 148
++RF L+ A+ ++ + I + T S++ C +KS+ D K++ IR NG
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127
Query: 149 ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLRGTVMAGRRDYRSILSTY 208
+ L ++L MYT CG L++A R+FDE + WN L+ +G D+ + +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187
Query: 209 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLIGSSILRTSLVDMYFKC 268
+M GVE++ Y+F+ + KSF+ ++ G + HG ++K+G + + SLV Y K
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247
Query: 269 GKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMVDDGIRPNSVILTTIL 328
++ AR+VF+E+TERDV+ W SII G+ N L + L +M+ GI + + ++
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307
Query: 329 PVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 388
+ LG+ VH+ +K +S++ + L+DMY KCGD+ S +AVF +R+
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367
Query: 389 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAQLRALRPGKEIHAY 448
+ +T++++GYA G +AV+ M++EG PDV TV +L CA+ R L GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427
Query: 449 AVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRNVILWTAMIDSYIENHCPHEA 508
+N ++ + ++LM MY+KCG M + +F+ + +++I W +I Y +N +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487
Query: 509 IGIFR-AMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVK 568
+ +F ++ + PD T+A +L C+ L G+EIHG +++ + V+ LV
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547
Query: 569 LYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFT 628
+Y KCGA +A M+F+ I K ++WT +I YG +G +EAI LF+QMR +GI + +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607
Query: 629 FKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVISILTRFGRIEEARRYVQ 686
F +L C +GLVD+ R F +M +I+P+ EHY+ ++ +L R G + +A R+++
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 354.8 bits (909), Expect = 2.3e-96
Identity = 183/556 (32.91%), Postives = 313/556 (56.29%), Query Frame = 0
Query: 129 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 188
R S+ + +QI + NGL F +T+LV ++ GS+++A R+F+ SK ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 189 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 248
+L+G A D L + MR VE VY+F ++K + L G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165
Query: 249 NGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 308
+G T L +MY KC ++ AR+VF+ + ERD+V W +I+AG++ N + R ALE
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225
Query: 309 TRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYC 368
+ M ++ ++P+ + + ++LP + + +G+E+H Y +++ G+ + I +AL+DMY
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285
Query: 369 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 428
KCG + + R +F +ERN + W +++ Y N ++A+ M EG +P V+V
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345
Query: 429 ILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRN 488
L CA L L G+ IH +V+ NVS+V+SL+ MY KC +D + +F ++ R
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405
Query: 489 VILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHG 548
++ W AMI + +N P +A+ F M+ +PDT T ++ +EL + K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465
Query: 549 QVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 608
V++ + FV+ LV +Y KCGA +A+++F+ + + TW A+I+ YG +G +
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525
Query: 609 AIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVI 668
A++LF++M+ I PN TF V+S C +GLV+ ++ F +M Y I+ S +HY ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585
Query: 669 SILTRFGRIEEARRYV 685
+L R GR+ EA ++
Sbjct: 586 DLLGRAGRLNEAWDFI 598
BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 344.0 bits (881), Expect = 4.0e-93
Identity = 198/633 (31.28%), Postives = 333/633 (52.61%), Query Frame = 0
Query: 72 PSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ--QGIPVNATTFSSLITACVR 131
PS +++P D ++ R N L+EA ++ Y+D GI + F +L+ A
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVAD 111
Query: 132 TKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 191
+ M KQIHAH+ G ++ + LV++Y CG ++FD S ++ +WN+
Sbjct: 112 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 171
Query: 192 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAG---ASALTQGLKAHGL 251
L+ + + + L + M VE + ++ +++ + + L G + H
Sbjct: 172 LI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 231
Query: 252 LIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREA 311
++ G + S I+ T LV MY K GK+ ++ + RD+V W ++++ N EA
Sbjct: 232 GLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 291
Query: 312 LEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALID 371
LEY R MV +G+ P+ ++++LP + R G+E+HAY +K + F+ SAL+D
Sbjct: 292 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 351
Query: 372 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVV 431
MYC C + SGR VF +R W A+++GY+ N ++A+ I M++ G +
Sbjct: 352 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 411
Query: 432 TVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNI 491
T+A ++P C + A + IH + VK + + ++LM MYS+ G +D ++++F +
Sbjct: 412 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 471
Query: 492 EQRNVILWTAMIDSYIENHCPHEAIGIFRAMQ-----LSKH------RPDTVTMARILYV 551
E R+++ W MI Y+ + +A+ + MQ +SK +P+++T+ IL
Sbjct: 472 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 531
Query: 552 CSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTW 611
C+ L L GKEIH +K V + LV +Y KCG +M++ VF+ IP K +TW
Sbjct: 532 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 591
Query: 612 TAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSV 671
II AYG +G QEAIDL M G+ PN TF V + C +G+VD+ +RIF +M
Sbjct: 592 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 651
Query: 672 RYEIKPSEEHYSLVISILTRFGRIEEARRYVQM 687
Y ++PS +HY+ V+ +L R GRI+EA + + M
Sbjct: 652 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
BLAST of HG10003462 vs. ExPASy Swiss-Prot
Match:
Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 5.4e-90
Identity = 182/617 (29.50%), Postives = 330/617 (53.48%), Query Frame = 0
Query: 73 SSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ-QGIPVNATTFSSLITACVRTK 132
SS+ K + D I + N +EAL D+ + + T+ SLI AC ++
Sbjct: 22 SSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81
Query: 133 SMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLR 192
S+ ++IH HI + + + L ++ MY CGSL DA+ +FD +++ ++ +++
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 193 GTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGL 252
G G+ + Y +M + + + ++F +IIK+ A +S + G + H +IK
Sbjct: 142 GYSQNGQG--AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 201
Query: 253 IGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRR 312
I + +L+ MY + ++ A +VF I +D++ W SIIAGF+ + EAL + +
Sbjct: 202 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 261
Query: 313 MVDDGI-RPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKC 372
M+ G+ PN I + L + G ++H IK++ + +L DMY +C
Sbjct: 262 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARC 321
Query: 373 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATIL 432
G + S R VF + W +++G A NG ++AV M+ GF PD +++ ++L
Sbjct: 322 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 381
Query: 433 PVCAQLR--ALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQR- 492
CAQ + AL G +IH+Y +K FL ++++ +SL+ MY+ C + LF +
Sbjct: 382 --CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 441
Query: 493 NVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIH 552
+ + W ++ + +++ P E + +F+ M +S+ PD +TM +L C E+ LK+G ++H
Sbjct: 442 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 501
Query: 553 GQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQ 612
LK P F+ L+ +Y KCG+ A+ +F+++ + ++W+ +I Y ++G +
Sbjct: 502 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 561
Query: 613 EAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLV 672
EA+ LF +M+S+GI PNH TF VL+ C GLV++ ++++ M + I P++EH S V
Sbjct: 562 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 621
Query: 673 ISILTRFGRIEEARRYV 685
+ +L R GR+ EA R++
Sbjct: 622 VDLLARAGRLNEAERFI 633
BLAST of HG10003462 vs. ExPASy TrEMBL
Match:
A0A1S3CBS1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498672 PE=4 SV=1)
HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 635/692 (91.76%), Postives = 662/692 (95.66%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK S TD PP K KIVSKFRN
Sbjct: 1 MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELK+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YGENGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
SEEHYSLVI++LTRFGR+EEARRYVQMSSSLS
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARRYVQMSSSLS 688
BLAST of HG10003462 vs. ExPASy TrEMBL
Match:
A0A0A0KXW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1)
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 634/692 (91.62%), Postives = 662/692 (95.66%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLV-AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSFI+SLHLQPF P+ L A AI NSGH+LS IK S TDTPPSK KIVSKFRN
Sbjct: 1 MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAHGLLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREALEYTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPD+VTVATILPVCAQLRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSYIEN CPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
SEEHYSLVI+ILTRFGR+EEARRYVQM SSLS
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688
BLAST of HG10003462 vs. ExPASy TrEMBL
Match:
A0A5A7TCH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00800 PE=4 SV=1)
HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 628/683 (91.95%), Postives = 653/683 (95.61%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLVAA-AISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKFRN 60
MEISSSF++SLHLQPFPP+ L AA AI N GHQLS IK S TD PP K KIVSKFRN
Sbjct: 1 MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60
Query: 61 RNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
R RP FAEKDAFPSSLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61 RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120
Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESS 180
FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQ+LFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180
Query: 181 SKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
SKS+Y WNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240
Query: 241 LKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300
LKAH LLIKNGLIGSS+L T+LVDMYFKCGKIKLARQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300
Query: 301 RLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360
RLQREAL YTRRM+DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
Query: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
Query: 481 LFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540
LFN +EQRNVILWTAMIDSY+EN CPHEAI IFRAMQLSKHRPDTVTMARILYVCSELKM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540
Query: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEA 600
LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKCGA KMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600
Query: 601 YGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKP 660
YG+NGEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAG VD+A+RIFKLMSVRY+IKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660
Query: 661 SEEHYSLVISILTRFGRIEEARR 683
SEEHYSLVI+ILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARR 679
BLAST of HG10003462 vs. ExPASy TrEMBL
Match:
A0A6J1G986 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452099 PE=4 SV=1)
HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 599/694 (86.31%), Postives = 647/694 (93.23%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPL---VAAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
MEISSSF LSLHL PFPP+PL VAAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1 MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
Query: 61 RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
+NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQ+GIPVNA
Sbjct: 61 QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
QGLKAH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
+IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
GFRPDVVTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTVTM+RILYVCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
K+LKMGKEIHGQVLKR FE VHFVS+E+VKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
EAYG NGE QEAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
K SEEHYS VI+ILTRFGRIEEA+ Y QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 694
BLAST of HG10003462 vs. ExPASy TrEMBL
Match:
A0A6J1IBE8 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471998 PE=4 SV=1)
HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 596/694 (85.88%), Postives = 647/694 (93.23%), Query Frame = 0
Query: 1 MEISSSFILSLHLQPFPPHPLV---AAAISNSGHQLSPIKSPTQSLTDTPPSKFKIVSKF 60
MEISSSF LSLHLQPFPP+PL AAA SNSGH+LS IK+ TQ+LTDTPP + K+V+KF
Sbjct: 1 MEISSSFTLSLHLQPFPPNPLAVAFAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
Query: 61 RNRNRPAFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
+NR RP FAE+DAFP SLPLHTKNPHAIY DIQRFARQNKLKEALTIMDYLDQ+GIP NA
Sbjct: 61 QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPANA 120
Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDE 180
TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQ+LFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
Query: 181 SSSKSIYAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
SSS+S+Y WNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
Query: 241 QGLKAHGLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFA 300
QGL+AH LLIKNGL+GSSIL T+L+DMYFKCGKIKLARQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLRAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
Query: 301 HNRLQREALEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQI 360
HNRLQREALEYTRRM+DDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK YSK I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSKLI 360
Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
+IQSALIDMYCKCGDIG GRAVFY SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
Query: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
GFRPDVVTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGV+DYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVLDYS 480
Query: 481 LKLFNNIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEL 540
LKLFN +EQRNVILWT MIDSYIEN C +EAI IFR MQLSKHRPDTV M+RIL+VCSEL
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVAMSRILFVCSEL 540
Query: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAII 600
K+LKMGKEIHGQVLKR FE VHFVS++LVKLYGKCGA KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSKLVKLYGKCGAVKMAKMVFEAVPVKGAMTWTAII 600
Query: 601 EAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEI 660
EAYG NGE +EAI LFDQMRSSG +PNHFTFKVVLSVC E G VDDA+RIFKLM+V Y+I
Sbjct: 601 EAYGNNGELEEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
Query: 661 KPSEEHYSLVISILTRFGRIEEARRYVQMSSSLS 692
K SEEHYS VI+ILTRFGRIEEA+RY QMSSSLS
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAKRYEQMSSSLS 694
BLAST of HG10003462 vs. TAIR 10
Match:
AT1G71460.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 868.6 bits (2243), Expect = 3.3e-252
Identity = 425/689 (61.68%), Postives = 542/689 (78.66%), Query Frame = 0
Query: 8 ILSLHLQPFPPHPLVAAAISNSGHQL----SPIKSPTQSLTDTPPSKFKIVSKFRNRNRP 67
+ SL ++ P V ++++ H+ +P KSP + PS+ + S +
Sbjct: 4 VSSLGIRDLPASLSVTTSLNHRPHRSDKDGAPAKSPIR------PSRTRRPSTSPAKKPK 63
Query: 68 AFAEKDAFPSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSL 127
F E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L
Sbjct: 64 PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSAL 123
Query: 128 ITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSI 187
+ ACVR KS+ KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQ++FDES+S ++
Sbjct: 124 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 183
Query: 188 YAWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAH 247
Y+WNALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H
Sbjct: 184 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 243
Query: 248 GLLIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQR 307
L IKNGL S L+TSLVDMYFKCGK+ LAR+VF+EI ERD+VVWG++IAG AHN+ Q
Sbjct: 244 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQW 303
Query: 308 EALEYTRRMV-DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSA 367
EAL R M+ ++ I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K Y +Q F+ S
Sbjct: 304 EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG 363
Query: 368 LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPD 427
LID+YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPD
Sbjct: 364 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 423
Query: 428 VVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFN 487
VVT+AT+LPVCA+LRA++ GKEIH YA+KN FLPNVS+V+SLMVMYSKCGV +Y ++LF+
Sbjct: 424 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 483
Query: 488 NIEQRNVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKM 547
+EQRNV WTAMID Y+EN I +FR M LSKHRPD+VTM R+L VCS+LK LK+
Sbjct: 484 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 543
Query: 548 GKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGE 607
GKE+HG +LK++FE + FVSA ++K+YGKCG + A F+A+ VKGS+TWTAIIEAYG
Sbjct: 544 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 603
Query: 608 NGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEE 667
N F++AI+ F+QM S G +PN FTF VLS+C +AG VD+A R F LM Y ++PSEE
Sbjct: 604 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 663
Query: 668 HYSLVISILTRFGRIEEARRYVQMSSSLS 692
HYSLVI +L R GR+EEA+R MSSS S
Sbjct: 664 HYSLVIELLNRCGRVEEAQRLAVMSSSSS 686
BLAST of HG10003462 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 364.0 bits (933), Expect = 2.7e-100
Identity = 195/598 (32.61%), Postives = 337/598 (56.35%), Query Frame = 0
Query: 89 IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 148
++RF L+ A+ ++ + I + T S++ C +KS+ D K++ IR NG
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127
Query: 149 ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLRGTVMAGRRDYRSILSTY 208
+ L ++L MYT CG L++A R+FDE + WN L+ +G D+ + +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187
Query: 209 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLIGSSILRTSLVDMYFKC 268
+M GVE++ Y+F+ + KSF+ ++ G + HG ++K+G + + SLV Y K
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247
Query: 269 GKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMVDDGIRPNSVILTTIL 328
++ AR+VF+E+TERDV+ W SII G+ N L + L +M+ GI + + ++
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307
Query: 329 PVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 388
+ LG+ VH+ +K +S++ + L+DMY KCGD+ S +AVF +R+
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367
Query: 389 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAQLRALRPGKEIHAY 448
+ +T++++GYA G +AV+ M++EG PDV TV +L CA+ R L GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427
Query: 449 AVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRNVILWTAMIDSYIENHCPHEA 508
+N ++ + ++LM MY+KCG M + +F+ + +++I W +I Y +N +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487
Query: 509 IGIFR-AMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVK 568
+ +F ++ + PD T+A +L C+ L G+EIHG +++ + V+ LV
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547
Query: 569 LYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFT 628
+Y KCGA +A M+F+ I K ++WT +I YG +G +EAI LF+QMR +GI + +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607
Query: 629 FKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVISILTRFGRIEEARRYVQ 686
F +L C +GLVD+ R F +M +I+P+ EHY+ ++ +L R G + +A R+++
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
BLAST of HG10003462 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 354.8 bits (909), Expect = 1.6e-97
Identity = 183/556 (32.91%), Postives = 313/556 (56.29%), Query Frame = 0
Query: 129 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 188
R S+ + +QI + NGL F +T+LV ++ GS+++A R+F+ SK ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 189 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 248
+L+G A D L + MR VE VY+F ++K + L G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165
Query: 249 NGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 308
+G T L +MY KC ++ AR+VF+ + ERD+V W +I+AG++ N + R ALE
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225
Query: 309 TRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYC 368
+ M ++ ++P+ + + ++LP + + +G+E+H Y +++ G+ + I +AL+DMY
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285
Query: 369 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 428
KCG + + R +F +ERN + W +++ Y N ++A+ M EG +P V+V
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345
Query: 429 ILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQRN 488
L CA L L G+ IH +V+ NVS+V+SL+ MY KC +D + +F ++ R
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405
Query: 489 VILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIHG 548
++ W AMI + +N P +A+ F M+ +PDT T ++ +EL + K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465
Query: 549 QVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 608
V++ + FV+ LV +Y KCGA +A+++F+ + + TW A+I+ YG +G +
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525
Query: 609 AIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLVI 668
A++LF++M+ I PN TF V+S C +GLV+ ++ F +M Y I+ S +HY ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585
Query: 669 SILTRFGRIEEARRYV 685
+L R GR+ EA ++
Sbjct: 586 DLLGRAGRLNEAWDFI 598
BLAST of HG10003462 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 344.0 bits (881), Expect = 2.9e-94
Identity = 198/633 (31.28%), Postives = 333/633 (52.61%), Query Frame = 0
Query: 72 PSSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ--QGIPVNATTFSSLITACVR 131
PS +++P D ++ R N L+EA ++ Y+D GI + F +L+ A
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVAD 111
Query: 132 TKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNA 191
+ M KQIHAH+ G ++ + LV++Y CG ++FD S ++ +WN+
Sbjct: 112 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 171
Query: 192 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAG---ASALTQGLKAHGL 251
L+ + + + L + M VE + ++ +++ + + L G + H
Sbjct: 172 LI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 231
Query: 252 LIKNGLIGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREA 311
++ G + S I+ T LV MY K GK+ ++ + RD+V W ++++ N EA
Sbjct: 232 GLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 291
Query: 312 LEYTRRMVDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALID 371
LEY R MV +G+ P+ ++++LP + R G+E+HAY +K + F+ SAL+D
Sbjct: 292 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 351
Query: 372 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVV 431
MYC C + SGR VF +R W A+++GY+ N ++A+ I M++ G +
Sbjct: 352 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 411
Query: 432 TVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNI 491
T+A ++P C + A + IH + VK + + ++LM MYS+ G +D ++++F +
Sbjct: 412 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 471
Query: 492 EQRNVILWTAMIDSYIENHCPHEAIGIFRAMQ-----LSKH------RPDTVTMARILYV 551
E R+++ W MI Y+ + +A+ + MQ +SK +P+++T+ IL
Sbjct: 472 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 531
Query: 552 CSELKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTW 611
C+ L L GKEIH +K V + LV +Y KCG +M++ VF+ IP K +TW
Sbjct: 532 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 591
Query: 612 TAIIEAYGENGEFQEAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSV 671
II AYG +G QEAIDL M G+ PN TF V + C +G+VD+ +RIF +M
Sbjct: 592 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 651
Query: 672 RYEIKPSEEHYSLVISILTRFGRIEEARRYVQM 687
Y ++PS +HY+ V+ +L R GRI+EA + + M
Sbjct: 652 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
BLAST of HG10003462 vs. TAIR 10
Match:
AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 333.6 bits (854), Expect = 3.9e-91
Identity = 182/617 (29.50%), Postives = 330/617 (53.48%), Query Frame = 0
Query: 73 SSLPLHTKNPHAIYDDIQRFARQNKLKEALTIMDYLDQ-QGIPVNATTFSSLITACVRTK 132
SS+ K + D I + N +EAL D+ + + T+ SLI AC ++
Sbjct: 22 SSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81
Query: 133 SMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQRLFDESSSKSIYAWNALLR 192
S+ ++IH HI + + + L ++ MY CGSL DA+ +FD +++ ++ +++
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 193 GTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGL 252
G G+ + Y +M + + + ++F +IIK+ A +S + G + H +IK
Sbjct: 142 GYSQNGQG--AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 201
Query: 253 IGSSILRTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRR 312
I + +L+ MY + ++ A +VF I +D++ W SIIAGF+ + EAL + +
Sbjct: 202 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 261
Query: 313 MVDDGI-RPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFIQSALIDMYCKC 372
M+ G+ PN I + L + G ++H IK++ + +L DMY +C
Sbjct: 262 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARC 321
Query: 373 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATIL 432
G + S R VF + W +++G A NG ++AV M+ GF PD +++ ++L
Sbjct: 322 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 381
Query: 433 PVCAQLR--ALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNIEQR- 492
CAQ + AL G +IH+Y +K FL ++++ +SL+ MY+ C + LF +
Sbjct: 382 --CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 441
Query: 493 NVILWTAMIDSYIENHCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKMLKMGKEIH 552
+ + W ++ + +++ P E + +F+ M +S+ PD +TM +L C E+ LK+G ++H
Sbjct: 442 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 501
Query: 553 GQVLKRKFEPVHFVSAELVKLYGKCGAAKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQ 612
LK P F+ L+ +Y KCG+ A+ +F+++ + ++W+ +I Y ++G +
Sbjct: 502 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 561
Query: 613 EAIDLFDQMRSSGISPNHFTFKVVLSVCKEAGLVDDAMRIFKLMSVRYEIKPSEEHYSLV 672
EA+ LF +M+S+GI PNH TF VL+ C GLV++ ++++ M + I P++EH S V
Sbjct: 562 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 621
Query: 673 ISILTRFGRIEEARRYV 685
+ +L R GR+ EA R++
Sbjct: 622 VDLLARAGRLNEAERFI 633
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038889186.1 | 0.0e+00 | 94.50 | pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa ... | [more] |
XP_008459588.1 | 0.0e+00 | 91.76 | PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... | [more] |
XP_011656084.1 | 0.0e+00 | 91.62 | pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sa... | [more] |
KAA0039287.1 | 0.0e+00 | 91.95 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472... | [more] |
KAG7037161.1 | 0.0e+00 | 86.60 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9C9I3 | 4.7e-251 | 61.68 | Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidop... | [more] |
Q9SN39 | 3.8e-99 | 32.61 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q3E6Q1 | 2.3e-96 | 32.91 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q7Y211 | 4.0e-93 | 31.28 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9LFI1 | 5.4e-90 | 29.50 | Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CBS1 | 0.0e+00 | 91.76 | pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis ... | [more] |
A0A0A0KXW0 | 0.0e+00 | 91.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1 | [more] |
A0A5A7TCH1 | 0.0e+00 | 91.95 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1G986 | 0.0e+00 | 86.31 | pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbit... | [more] |
A0A6J1IBE8 | 0.0e+00 | 85.88 | pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71460.1 | 3.3e-252 | 61.68 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT4G18750.1 | 2.7e-100 | 32.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 1.6e-97 | 32.91 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G57430.1 | 2.9e-94 | 31.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53360.1 | 3.9e-91 | 29.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |