HG10003444 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCTTGCAACTAATTCTCCAGCTCACTCATCAAGCAGTGACGATTTTGCTGCGTTTCTTGATGTAGCTCTAGATTCCCATTCCTCTGACTCATCACCCTGTGAAAATACCGAGGGTGACAATAATGCTGAAAGTGAGAGGTACGATTAATTTTTAAAATTAATGAACTTCCATTGTTCTTTGAAGTTAATAATGCCTAAAGACAATGGTTTAGGGTTTTAGTTTTAGGTTAATCTAATGTTTTTATTACTTAAATCTAGAATTAAGTGGAAAGTATCTTGTAGTGGCCTGGCTCTCTTTTGAATCCCCATATAGATAAAAATATGAAATAAGTGCTATCATGATTAAGATTTAAGAGTGGCGGGTTCCTTTTTCCAATTTCTGGACGGTATTCTTTAAAAAAATAGATTGTGTTTGGTATCATACGACATTTGAAAATTCTTGTTGAAATAGGATTTCATGATTGGTTTAACATTCCAGATTTCCCCATCTGACTTTCTTGTGATTTATAGCAATTTGTAGATTCTAAGCTTCTAATCTCAAACTCCGAGTTACCCTTTTTAAACGATTTTTTTAAGAAGCCAAATTTCCAAGAAGAAGAATGAAAGAATAATAGCAAACTGCAAAGCAGCACAAAAAAAGAAGAATATAAAACCGAAGACTAGACATTTACAACAGTCATAGTTATTTAAACTCTCAGTTAATGAGTTTATGTGCCATTTAGTTTCACTTTCATCTAATTATTTTCTTTTATAGATATCCCAAGTGGTCTAGTTCATGAAAGTTTTTATCAGTTACAATGTGTAATTATTATTTTGTATTAAAAGTCTAAAACCATGGTAAACAGGATGATGCTGCTATCCAATAAGAGTAATTTGTGATTTCTGTGTTCGTAATTTGTATTATTTTTCCTTTTGCATGAATAACAGCATTGAGTTGTGGCAAGTGGCGACTATCATTTCTGCACATAATAACGAGGGTTTGTAGGATTGGTTATAAGTTATAACCATATAACTAAATTGTGGCAGTTTATCGTCGTTTTATCAATTTAACATGTCAAATATTTTTTATTCAATCCATTCAATTTATAGGATAAAGCGTCGTAAGGTGGAGAAACTGGAAAACTCAGAGGAGGATATTCTGTATGGAGTTGAAGAGCAAAATTTAGGTAAGTTAAACTCTTCGTACCAACCCCTTTTGTTCATCTTTTACTCTTGCTCTACCCCTTACTTTCAATGTAGCCAATTTGTGACTGCCACATGTATTATACAATGTATACTTACCTACTTCCTTACTTCTTAGAGAGCTATACGACGTGCTTGCTGTGTTAGTTCTTTTTTTCCACCCACTCTGCATATTCATAGAGCTTTTCCCTTGCTAATCTTCTGGTACATATTTTGTTTTTTGTGGTTGCCTCCTCTTCCCTTCTTATAGAATCTGATTGGAGGTTTGTCACCCTTTTTTATCCACCTTTTATTTAAATTCTATGTTCTTTAAGAACCATATCGAGTTGGCCCCCAAATGATCTATATTTAATCACCTCCCTATTAGTGTTGTTGAGTAAGAAAGTATTCCCTAGAAACTATGAAATCACAAAGGGAGGGGAAAGATAGCTATATTCCTGTATATCCAAAAGTGAAATAACATATTCTCGGGCTCAATGTTCAAAGTGGTCTGAACACTCGTGGATAAAAAATAAAGAACATAGGATGGGAGTTGTTCTTATATATGATACTTGTGAACGATCTTTGGTCTGAACGAAAATAGTCATTTTTAATTTCTTTGAAAACTAAGAATTACGGGATGTTAGATGGATATACACCTGAAATTTGGTGGTATCTGATTTCAGGAACTATTTCAGTCCAGCTGTCCTCTGCTCACCATATATTCTTTATTTCGGTTCCTTTCTTCCTCTACCAATGTAACCTATTCAGTTCTGTGTAATTGTAACTTAATAACCGAGAAATATAGAAGCCTTCATATTGAAGCAAGTATTTGACTCCTTGTATCTCTTTGTTGGTTTTTCTCTACTCTCCGAATTCTTCTGTTTTGAAAATAATAATCAATTGCAGAAGTATTATCAAAGCAACAACTATGCAGTCATCCTGGTTCATTTGGAAATATGTGTATCATATGTGGGCAGAGGTTGGATGAGGAATCTGGCGTGACATTTGGGTATATACATCGGGTATGTTTTCTTTGTATGAATATCCAATTATCTTCTATTCTTTGTTACCATGTATAGAATGTTTGGGTGGGGTGGGGGGTGGGTTAGAAGGAACTCATGAGGTTTGGGGGTTTACAGAATGGGCACCATTTAGAAGAGGAATGAGAAATGATGTCAAGCCTTTTATTTTCTTCTTGGTTTTACAAAATGGGCACCATCTACTTCTACTGCCTCATTTGCTATAGCCTATGAGGATGCAATAAGTTTTTGTCTATCTTTTATGAAGGGCTCGTTGATTTTCTGAACTCGTGCTTTTTTGGGTTTTGTTTTGAAACCTTGGCAAAGATTTCATGTATTCTAGTTCCAGTCACTAAGCCGATGGGTCATAGATGTGACGTTGTTTAGTGCTGGACATTTTTGGAATCAAGCAAATAGAGTCTTCCTTTCATGCATTAATAAGGGTCACATTCCCAAAATTCAACACTGCTTCTTCTCTCTCTCTCTCTAAAAATGTAAGAGGATAGAGGGAATCGGGAAGATCTTTGTCAATAGGAAGTCTTTTACAGTTGGAAGAAGTGGAAATGGAAGAAGATCAGTTTTAGAGGAGCGTAGGGGACTGAAAGTCAGGAAAGTCGAGTTGGAGATAGGTATTGTGGTATGGGTCAGAGCCTGATTGCCTTTGGTGAAGGATTCAAGCAATCCTTTGGGTTTTTAGCCGAGAAGTAGATTAGAGGCAGCCATTATTTTCTTCCATGTCCTGTCAAACAAAAGAAGCGCTTTGCATAGTATCCTTAGAAACCTTAAAGGTAGAAATTCATAGATTCTTATCTCAGAAGGTGAAAGAAAGAAAGGTTAGAATGCTTTAGTTGATGAAATTTCTGGGTTTTTGCATCTTCTATTTAATGTAGCTTTTTTTTGGCTTTTCTTTAAGTTTTAGTTAGGTTCTGCTTGGTTCTTTAAAAGATCTTTTATGTTCAGTTCTTTTGTAAGTTACCGTGTGGTAACTGGTAACTTCTGTTGGTTTAGTTGTTCTGTGGTTTAGTATTTAAGCTAAACCTTCAGCTCTTTAATAAAGCATTGAGGATTCAGAAGTTAAAAACTTCCCCCAACTTGTTACACCACTTTGGCAGTGGGTATGGTGGGAAGGGTGAGTCCTGGATATGGAGGCTGGTCCCTAATCCTCTTTATTTTTTAATTCACCCCCCTCCCTCTTTTTTTTCGGTTGTGCCTTACCTTACACACCGGTTTATTCCCTAGGAATTCATTGCTGAATGCTGTTGGTAATGGGAGAGGAGGGGGCTTTTTTTGTGTAGGTTGGTGGATTGGAGAGCCATATTCCTTTTCTAACCCCTTGAGTTTTCCTCCTGCTAATAAGGGAGAATTGATGGGAAATTGGGCTTCCAGTCAGTCTGCTCTTGCCTCGGTAGGTATTCAGGCGATTTTAGCTCTGCAATGGTCTCGGGATCCTAAAGAAAGGGTGTTTTTGGGAAAAAGAAAGATGGGGAGGGAGGAAAGGAACTTGAAAGAGAGAGATCGTGGACTAATCCCATTTAGTTTGACATGTTTATGTTTTTTTTTAATATATATTCATTCACTGTTGTCAAAATAGATACTAGCTATGGATTTTAACTTTCCATGACTGGAGAAGTATCGTCGTTTATATGCCTCTTTGATCAATATACTATAGTTTCTTAAAAACAAAAAGGAAAATAGTGAAATAGTCCCATGTAGTTTGAGATGTTTTTGGAGAGCCATATTCCTTTTCTAACCCCTTGAGTTTTCCTCCTGCTAATAAGGGAGAATTGATGGGAAATTGGGCTTCCAGTCAGTCTGCTCTTGCCTCGGTAGGTATTCAGGCGATTTTAGCTCTGCAATGGTCTCGGGATCCTAAAGAAAGGGTGCTTTTGGGAAAAAGAAAGATGGGGAGGGAGGAAAGGAACTTGAAAGAGAGAGATCGTGGACTAATCCCATTTAGTTTGACATGTTTATGTTTTTTTTTAATATATATTCATTCACTGTTGTCAAAATAGATACTAGCTATGGATTTTAACTTTCCATGACTGGAGAAGTATCGTCGTTTATATGCCTCTTTGATCAATATACTATAGTTTCTTAAAAACAAAAAGGAAAATAGTGAAATAGTCCCATGTAGTTTGAGATGTTTTTGTTAATATAATATATATTTTTCCTTCAGTTATATTTGTTCACTGATGACAAAATAGACACTGGCTATGAATTTTAATTTAGCATGGCTGGTGAAGTACAGATTACTTGTAATTTGCTAGTATATCAAACTATGTGCTAAATGTATGACCCATCCGATAATCTTGCAGGGACTCAGACTTAATAATGATGAAATTAACCGGCTACGTAACATAGACATGAAGAACTTGTTGCAGCATAAAAAGCTTATCCTGGTTCTTGATCTGGATCACACACTGTTAAACTCAACTCAGCTGGGGCATTTGACACCTGAAGAGGAGTATTTAAGGAGTCAAACAGATTCTCTAGAAGGTACATTGTCCTCTCATCTGTACATAGTTCTACTTTCTAAAGTAACTTTGATGTGGTGTTTACTGTTCTTTGATAAGGTGTTTACTGTTATTTCATTCCCATCGTGA ATGAGCCTTGCAACTAATTCTCCAGCTCACTCATCAAGCAGTGACGATTTTGCTGCGTTTCTTGATGTAGCTCTAGATTCCCATTCCTCTGACTCATCACCCTGTGAAAATACCGAGGGTGACAATAATGCTGAAAGTGAGAGGATAAAGCGTCGTAAGGTGGAGAAACTGGAAAACTCAGAGGAGGATATTCTGTATGGAGTTGAAGAGCAAAATTTAGAAGTATTATCAAAGCAACAACTATGCAGTCATCCTGGTTCATTTGGAAATATGTGTATCATATGTGGGCAGAGGTTGGATGAGGAATCTGGCGTGACATTTGGGTATATACATCGGAGGATAGAGGGAATCGGGAAGATCTTTGTCAATAGGAAGTCTTTTACAGTTGGAAGAAGTGGAAATGGAAGAAGATCAGTTTTAGAGGAGCGTAGGGGACTGAAAGTCAGGAAAGTCGAGTTGGAGATAGGTATTGTGGGACTCAGACTTAATAATGATGAAATTAACCGGCTACGTAACATAGACATGAAGAACTTGTTGCAGCATAAAAAGCTTATCCTGGTTCTTGATCTGGATCACACACTGTTAAACTCAACTCAGCTGGGGCATTTGACACCTGAAGAGGAGTATTTAAGGAGTCAAACAGATTCTCTAGAAGGTACATTGTCCTCTCATCTGTACATAGTTCTACTTTCTAAAGTAACTTTGATGTGGTGTTTACTGTTCTTTGATAAGGTGTTTACTGTTATTTCATTCCCATCGTGA ATGAGCCTTGCAACTAATTCTCCAGCTCACTCATCAAGCAGTGACGATTTTGCTGCGTTTCTTGATGTAGCTCTAGATTCCCATTCCTCTGACTCATCACCCTGTGAAAATACCGAGGGTGACAATAATGCTGAAAGTGAGAGGATAAAGCGTCGTAAGGTGGAGAAACTGGAAAACTCAGAGGAGGATATTCTGTATGGAGTTGAAGAGCAAAATTTAGAAGTATTATCAAAGCAACAACTATGCAGTCATCCTGGTTCATTTGGAAATATGTGTATCATATGTGGGCAGAGGTTGGATGAGGAATCTGGCGTGACATTTGGGTATATACATCGGAGGATAGAGGGAATCGGGAAGATCTTTGTCAATAGGAAGTCTTTTACAGTTGGAAGAAGTGGAAATGGAAGAAGATCAGTTTTAGAGGAGCGTAGGGGACTGAAAGTCAGGAAAGTCGAGTTGGAGATAGGTATTGTGGGACTCAGACTTAATAATGATGAAATTAACCGGCTACGTAACATAGACATGAAGAACTTGTTGCAGCATAAAAAGCTTATCCTGGTTCTTGATCTGGATCACACACTGTTAAACTCAACTCAGCTGGGGCATTTGACACCTGAAGAGGAGTATTTAAGGAGTCAAACAGATTCTCTAGAAGGTACATTGTCCTCTCATCTGTACATAGTTCTACTTTCTAAAGTAACTTTGATGTGGTGTTTACTGTTCTTTGATAAGGTGTTTACTGTTATTTCATTCCCATCGTGA MSLATNSPAHSSSSDDFAAFLDVALDSHSSDSSPCENTEGDNNAESERIKRRKVEKLENSEEDILYGVEEQNLEVLSKQQLCSHPGSFGNMCIICGQRLDEESGVTFGYIHRRIEGIGKIFVNRKSFTVGRSGNGRRSVLEERRGLKVRKVELEIGIVGLRLNNDEINRLRNIDMKNLLQHKKLILVLDLDHTLLNSTQLGHLTPEEEYLRSQTDSLEGTLSSHLYIVLLSKVTLMWCLLFFDKVFTVISFPS Homology
BLAST of HG10003444 vs. NCBI nr
Match: XP_038890381.1 (RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1 [Benincasa hispida] >XP_038890382.1 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1 [Benincasa hispida]) HSP 1 Score: 291.6 bits (745), Expect = 6.6e-75 Identity = 162/228 (71.05%), Postives = 170/228 (74.56%), Query Frame = 0
BLAST of HG10003444 vs. NCBI nr
Match: XP_023525838.1 (RNA polymerase II C-terminal domain phosphatase-like 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.5 bits (724), Expect = 1.8e-72 Identity = 158/228 (69.30%), Postives = 166/228 (72.81%), Query Frame = 0
BLAST of HG10003444 vs. NCBI nr
Match: XP_022133134.1 (RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1 [Momordica charantia]) HSP 1 Score: 281.2 bits (718), Expect = 8.9e-72 Identity = 159/231 (68.83%), Postives = 168/231 (72.73%), Query Frame = 0
BLAST of HG10003444 vs. NCBI nr
Match: XP_022133135.1 (RNA polymerase II C-terminal domain phosphatase-like 4 isoform X2 [Momordica charantia]) HSP 1 Score: 281.2 bits (718), Expect = 8.9e-72 Identity = 159/231 (68.83%), Postives = 168/231 (72.73%), Query Frame = 0
BLAST of HG10003444 vs. NCBI nr
Match: KAG7037160.1 (RNA polymerase II C-terminal domain phosphatase-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.4 bits (716), Expect = 1.5e-71 Identity = 157/228 (68.86%), Postives = 164/228 (71.93%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy Swiss-Prot
Match: Q00IB6 (RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis thaliana OX=3702 GN=CPL4 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29 Identity = 95/220 (43.18%), Postives = 119/220 (54.09%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy TrEMBL
Match: A0A6J1BUF9 (RNA polymerase II C-terminal domain phosphatase-like OS=Momordica charantia OX=3673 GN=LOC111005808 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 4.3e-72 Identity = 159/231 (68.83%), Postives = 168/231 (72.73%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy TrEMBL
Match: A0A6J1BV42 (RNA polymerase II C-terminal domain phosphatase-like OS=Momordica charantia OX=3673 GN=LOC111005808 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 4.3e-72 Identity = 159/231 (68.83%), Postives = 168/231 (72.73%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy TrEMBL
Match: A0A6J1GC38 (RNA polymerase II C-terminal domain phosphatase-like OS=Cucurbita moschata OX=3662 GN=LOC111452801 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 1.3e-71 Identity = 157/228 (68.86%), Postives = 165/228 (72.37%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy TrEMBL
Match: A0A6J1ID30 (RNA polymerase II C-terminal domain phosphatase-like OS=Cucurbita maxima OX=3661 GN=LOC111471991 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 4.8e-71 Identity = 156/228 (68.42%), Postives = 163/228 (71.49%), Query Frame = 0
BLAST of HG10003444 vs. ExPASy TrEMBL
Match: A0A6J1EFC1 (RNA polymerase II C-terminal domain phosphatase-like OS=Cucurbita moschata OX=3662 GN=LOC111432775 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 6.2e-71 Identity = 158/228 (69.30%), Postives = 166/228 (72.81%), Query Frame = 0
BLAST of HG10003444 vs. TAIR 10
Match: AT5G58003.1 (C-terminal domain phosphatase-like 4 ) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30 Identity = 95/220 (43.18%), Postives = 119/220 (54.09%), Query Frame = 0
BLAST of HG10003444 vs. TAIR 10
Match: AT2G04930.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 6.5e-04 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of HG10003444 vs. TAIR 10
Match: AT5G54210.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 8.5e-04 Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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