HG10003429 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003429
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LysM domain-containing protein
Location	Chr08: 1227113 .. 1230901 (+)
RNA-Seq Expression	HG10003429
Synteny	HG10003429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTCCCACACTCGACTCTCCCTTCTCTAACTCACAGGTATTTCGCTATTCCCTTAAAATCTCTAAACCCATTACTCATAGCATACCCTTTTCTTTTTGTTTGAAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTCCCTCCAATTTCTACCCCAGAAATTGGGCCAACACCAGAAGATCATTCAAGAATCAATTCAGAGCCATTGCTATGGTATGTTTGCTCTCCATTTAAACCTGGGTTCATTTCTGTACCTTTTCTGCCTGTTTGATTTCAGAAACAACTTTGGAAAAGATTTTCCACTGAAATCTCAACTCTATCGTGCTTTTGGTTCTAATTAGTTCGTCCCCATGTTTGAATTGTTTGCTAAATTTTGCCTCTGTATTCCTTTGTTTTATCACAGACCCAGATATTGATGGGTGATTTATGGTTTGAATTTCTTTTGAAACCTCTTTTCCGAGGATGTTTTGAGATTGTAAAGATTGAGTTAGTAATTAATTGTTAAATATTTTTCTTATAACTTCTGTGTTGATTTTGGCAGAGATGGAGGTTTCAACTTCAAGATATATCCAAAGATCAACTCTCCACCAAGCACCAGTTTGTTCATATTATAGAAGGGTAAGAAGAAATAGTAATTTTATTTACTCTGCTTTACTCTTTAGAGGAATTCGATGGTATCTGAAATGTATATTTTCCAGCCACAACGACTTTACTTTTCTGGAGTGAAAGAGGGGTTTTGTGGCTTACTAGCTTAAAAGTACCTCTCTTTTGTCGAGAACATGAAATTATTAAAAATTACTGTTGAACACACCTTTAAGCACTCAAAATCAATTTACAGTTTGATTTTACACTTTTATATCCAATTTTCTTACCATCAAACCTTTTATAGATAGATTTGTTTCCAGTTGCACAGTGAGTTACCAACTAAAGTCGTTGCTAGTAATTGGATTCTACACTCCTTATTGGACCAAACTTAGTTGTCAATGTAATGATATGCTGTTCAATATATGAAATTATTTTGAGAAATTTACGTTATTCAAAGTTTCAAATCAATCGTATGAGCAATCGCACAGTTAAAATGAGTTAGTACTTCAGGAAATTCAGTTGAATTTCTGAATTATTACAGTTTCATCTAAGTGTTAAGATGTCAATTGGTAGGAGGGAGAGCTTGACTTCAATTTCAAATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGCGGTAAGCAAGCGTGTACTTCTTTCCCACTTTTAAGTGATGTTCTAAACTCGTCTGCAGGATAATTTTATAACTTTCCTTTTTGTGGTTTCTACCTCTAGCTTCTTGTTGAATGACTTCAGAAAGAAATTGATAGCTCAATTTTTTTTTTATAGCAATCATTTTCCTAAGTTATTGATTGTGTTTTGATTCTAAACTTTGATAGCATGGTTGGTTATGTATATTATAAATGATTCTTACTTTTGGAATATAATTTTTCTTTGCAACCTATTTACTAGTAATGGCTGCTATAGGAAAAATTGTAAGATAGCTGCAAACTAATTAATTACTGAATGTTCAAATCTTCCCAACAAAATTGATGTAAAGAAACAAATCCCAAGTGAATTTAAAATCAGATTTTCATGAGCTGGGTTCATAATTTCTAAACTTTGTGATACTTGAAGAATTGACAAAATCACTTGAACCATACTGAACTGCAATTTGTGGCTCATCATAATTGGATGTAACGAAAGAAATCACAATCATGGGAGTTTTAGTATCATCATGTTTGATTGTGATACTGCACCAGGTTGTGAGACTAGCTAGCCTTTGAAATATTGCTGGCTTTGGTCAATCACTTGACTACAAAAAATGCGAAATAAATATCCATGTCAAGCTAGGAGAGGAGAGGTAAGGCCTGCAGGCATATGAAAAAATGCGAAATAAATATCAATTTTGTTAGACTAAGTTTTGACATGATTACAAGTTTGTGCTTAAATACCCTCCTAAAGTACTTCCAGTACCATCTTCAACTTTGTTAAAGCCTTATTGTAGGAGGACTGGCCAGGTTCTAGTTTGCAGATTTTGAGTGATTCAGAGTGAGTTGTTGAAGAGAAAACTCTAGTTCAATTTCAGCTCAGTATCCATATGATCTGTTACGTACCTGAGCTACACGTTAGAGGATTTTTGTTTATCCATATATGGTCACAAGTATTAAGTAATTAATAATTTACTGATAGTTTTTGTTATCCATATGATTCGTTACATACCTCACGGGAATGCATCCGGAGTAGTTGAGGACATCTTTGTCAGTTCAAGATTTTTACTCTATAATATATTCTTATTTGTGGCTTCTTTCTTATATCCTACATAATCACTGCAGATTAGAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTTCGCGCAAGCCTCCTCTCATCTACCTCCTGTAAGTTTCTTTTTCTCACCAGAAGTAATTATATTCTTTCATTCAGAGCTGTCTAAACTAAACATATCATCTCTACGTACTTATTTGGATACTTCTTTGACGTTTATCTAGAGAAGCGACAATTCAACAAACTTATTTGCTCTCTTTTTCACTTTTTTTCCCTCTGTCAGGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTCTGCTAGAGTTTTCGGAACATTGAAGCTTGAAACCGTTGATAAACGAGAGGGAGAACATCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAAGTGGATGGTTTGGATTGTGAGTCCCCTATAGATTCTTCAGTAAGTAATGTAACTTTATGCGCCTACTTTTACCCCAATTCACCCTTATATGAAGTTTTTCTTGAGCATGGTCTTGTTAGATTTCTTTAACTGGGGCAGAGGTAATACTTGCAATGAGAAATGGGAGCAAAATTGACTACTACTAAAGTTGTTGAATCGTTGCTTTCATTTCTTTGAGCACCCAACTCACCAAGACTTTTCCAACTGATCATTCATTTTTGTCTATTCCTAATGGAGTTCTCTGGCCATCCACTTCCCTTTCATCTGGTTGGCATCATCTTTTTGTTTCAACTAGATGATAATACTGCCAAAATGGTAAACTATCTTCACATAACAACATTGGATTTCCACATGGGTGGTTCTGGTACAAGGCAGAAATATGTTGCTGAGTGGGTCTAATATATATATATATATATATATGCTTCGTTTCTAAACAATACCCTTAAAATTATTCTAAACTCAGCTGAACATGTTCATATAAGAAAAACGTAGCTATGTAATCTTGCTCTGTTCCAGATTGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGCTGCACGTATTAGCTTTGATTCAAACTTTGGGAGTCATAATTTGTTTTCTAGTCTCCATTCCAGCCAAAAGTTCACAATTTGGTAATAGTTTATAGTTATTGTTTTGCAGAGTCCAGAAGATGAACAGATCTCAGTAGAAGATTTATCACATGCTTACAAGAAACTGGACCAGGATTACGAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAGGAATAG

mRNA sequence

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTCCCACACTCGACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAGAAGATCATTCAAGAATCAATTCAGAGCCATTGCTATGAGATGGAGGTTTCAACTTCAAGATATATCCAAAGATCAACTCTCCACCAAGCACCAGTTTGTTCATATTATAGAAGGGAGGGAGAGCTTGACTTCAATTTCAAATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTAGAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTTCGCGCAAGCCTCCTCTCATCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTCTGCTAGAGTTTTCGGAACATTGAAGCTTGAAACCGTTGATAAACGAGAGGGAGAACATCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAAGTGGATGGTTTGGATTGTGAGTCCCCTATAGATTCTTCAAGTCCAGAAGATGAACAGATCTCAGTAGAAGATTTATCACATGCTTACAAGAAACTGGACCAGGATTACGAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAGGAATAG

Coding sequence (CDS)

ATGGAAGTGAAGCTCAGCCAGAGAAATAGAGCAGACCGTTTTTCTCTCCTCCCCAAGTTGCTCCCACACTCGACTCTCCCTTCTCTAACTCACAGAAATTGGGCCAACACCAGAAGATCATTCAAGAATCAATTCAGAGCCATTGCTATGAGATGGAGGTTTCAACTTCAAGATATATCCAAAGATCAACTCTCCACCAAGCACCAGTTTGTTCATATTATAGAAGGGAGGGAGAGCTTGACTTCAATTTCAAATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTAGAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTTCGCGCAAGCCTCCTCTCATCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTCTGCTAGAGTTTTCGGAACATTGAAGCTTGAAACCGTTGATAAACGAGAGGGAGAACATCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAAGTGGATGGTTTGGATTGTGAGTCCCCTATAGATTCTTCAAGTCCAGAAGATGAACAGATCTCAGTAGAAGATTTATCACATGCTTACAAGAAACTGGACCAGGATTACGAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCAGAGACCTGAACAGGAATAG

Protein sequence

MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNWANTRRSFKNQFRAIAMRWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE

Homology

[Close]

BLAST of HG10003429 vs. NCBI nr
Match: XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])

HSP 1 Score: 484.2 bits (1245), Expect = 7.6e-133
Identity = 245/278 (88.13%), Postives = 254/278 (91.37%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT-HRNWANTRRSFKNQFRAIAMRWRFQLQDI 60
           MEVKLSQRNRADRF L PKLLP  TLPSLT HRNWANTR+S KNQFRAI +RWRFQLQDI
Sbjct: 1   MEVKLSQRNRADRFFLFPKLLPQPTLPSLTHHRNWANTRKSLKNQFRAITLRWRFQLQDI 60

Query: 61  SKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPR 120
           SK+QLSTKH  VHI+EG ESLT   NQNGDP HSI +ANK+I DTDLEQKGQNIKIQNPR
Sbjct: 61  SKNQLSTKHHLVHIVEGSESLTLNPNQNGDPTHSISVANKRIKDTDLEQKGQNIKIQNPR 120

Query: 121 AIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIGASS 180
           AIRDVYQLEEKLQSALN LRNYKKLFA ASSHLPPARTTSFIVLVPLIVFCARCIIGAS 
Sbjct: 121 AIRDVYQLEEKLQSALNELRNYKKLFALASSHLPPARTTSFIVLVPLIVFCARCIIGASY 180

Query: 181 ARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQISVE 240
           ARVFGT +LETVDKREG+HHKFRSGHWRSALRDIRE+DGLDCESPIDS SP EDEQIS E
Sbjct: 181 ARVFGTSRLETVDKREGKHHKFRSGHWRSALRDIRELDGLDCESPIDSMSPSEDEQISDE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           DLSH YKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHDYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of HG10003429 vs. NCBI nr
Match: KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 443.0 bits (1138), Expect = 1.9e-120
Identity = 227/282 (80.50%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT--HRNWANTRRSFKNQFRAIAMRWRFQLQD 60
           MEVK+ QRNRA RFS    LLPH TLPSLT   RNWANT++SF NQ R I++RWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  ISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP 120
           +SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTDLEQKGQNIKIQN 
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120

Query: 121 RA---IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCII 180
           RA   IRD +QLEEKLQSALNGL+ YKKLFA ASS LPPARTTSFIVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQ 240
           GAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP  DEQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of HG10003429 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 2.5e-120
Identity = 226/282 (80.14%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT--HRNWANTRRSFKNQFRAIAMRWRFQLQD 60
           MEVK+ QRNRA RFS    LLPH TLPSLT   RNWANT++SF NQ R I++RWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  ISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP 120
           +SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCII 180
           R    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS LPPARTTSFIVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQ 240
           GAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of HG10003429 vs. NCBI nr
Match: XP_011656102.1 (uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hypothetical protein Csa_009213 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 2.1e-119
Identity = 227/281 (80.78%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNWANTRRSFKNQFRAIAMRWRFQ-LQDI 60
           MEVK+ QRNRA RFSLLP   P S + SL+  NWANT++SF NQ R IA+RWRFQ L DI
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLS--NWANTKKSFNNQLRGIALRWRFQLLADI 60

Query: 61  SKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP- 120
           SK QLSTKH FVHI+EG ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQNP 
Sbjct: 61  SKHQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPR 120

Query: 121 --RAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIG 180
             R IR+ +QLEEKLQSALNGLR YKKLFA ASSH PPARTTSFIVLVPL++FCARCIIG
Sbjct: 121 EVRKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIG 180

Query: 181 ASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQI 240
           AS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQI
Sbjct: 181 ASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQI 240

Query: 241 SVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           SVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 SVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

[Close]

BLAST of HG10003429 vs. NCBI nr
Match: XP_011656104.1 (uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 2.1e-119
Identity = 227/281 (80.78%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNWANTRRSFKNQFRAIAMRWRFQ-LQDI 60
           MEVK+ QRNRA RFSLLP   P S + SL+  NWANT++SF NQ R IA+RWRFQ L DI
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLS--NWANTKKSFNNQLRGIALRWRFQLLADI 60

Query: 61  SKDQLSTKHQFVHIIEG---RESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQ 120
           SK QLSTKH FVHI+EG    ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQ
Sbjct: 61  SKHQLSTKHHFVHILEGYGRNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQ 120

Query: 121 NPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIG 180
           NPR IR+ +QLEEKLQSALNGLR YKKLFA ASSH PPARTTSFIVLVPL++FCARCIIG
Sbjct: 121 NPREIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIG 180

Query: 181 ASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQI 240
           AS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQI
Sbjct: 181 ASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQI 240

Query: 241 SVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           SVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 SVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

[Close]

BLAST of HG10003429 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 9.4e-121
Identity = 227/282 (80.50%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT--HRNWANTRRSFKNQFRAIAMRWRFQLQD 60
           MEVK+ QRNRA RFS    LLPH TLPSLT   RNWANT++SF NQ R I++RWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  ISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP 120
           +SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTDLEQKGQNIKIQN 
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120

Query: 121 RA---IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCII 180
           RA   IRD +QLEEKLQSALNGL+ YKKLFA ASS LPPARTTSFIVLVPL++FC RCII
Sbjct: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSPE-DEQ 240
           GAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP  DEQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of HG10003429 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120
Identity = 226/282 (80.14%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT--HRNWANTRRSFKNQFRAIAMRWRFQLQD 60
           MEVK+ QRNRA RFS    LLPH TLPSLT   RNWANT++SF NQ R I++RWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  ISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP 120
           +SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCII 180
           R    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS LPPARTTSFIVLVPL++FC RCII
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180

Query: 181 GASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQ 240
           GAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQ
Sbjct: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of HG10003429 vs. ExPASy TrEMBL
Match: A0A0A0KSX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.0e-119
Identity = 227/281 (80.78%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNWANTRRSFKNQFRAIAMRWRFQ-LQDI 60
           MEVK+ QRNRA RFSLLP   P S + SL+  NWANT++SF NQ R IA+RWRFQ L DI
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLS--NWANTKKSFNNQLRGIALRWRFQLLADI 60

Query: 61  SKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP- 120
           SK QLSTKH FVHI+EG ESLTS SNQNGDP HSIV+ANKKIMDTDLEQK QNIKIQNP 
Sbjct: 61  SKHQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPR 120

Query: 121 --RAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIG 180
             R IR+ +QLEEKLQSALNGLR YKKLFA ASSH PPARTTSFIVLVPL++FCARCIIG
Sbjct: 121 EVRKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIG 180

Query: 181 ASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDSSSP-EDEQI 240
           AS AR FGTLKL+ +DK+EGE  KFRSGHWRSALRDIRE+DGLDCE+PIDS+SP EDEQI
Sbjct: 181 ASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQI 240

Query: 241 SVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           SVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 SVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

[Close]

BLAST of HG10003429 vs. ExPASy TrEMBL
Match: A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118
Identity = 226/290 (77.93%), Postives = 248/290 (85.52%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLT--HRNWANTRRSFKNQFRAIAMRWRFQLQD 60
           MEVK+ QRNRA RFS    LLPH TLPSLT   RNWANT++SF NQ R I++RWRFQL D
Sbjct: 1   MEVKVRQRNRAHRFS----LLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLD 60

Query: 61  ISKDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNP 120
           +SK QLSTKH FVHI+EG ESL SISN+NGDP +SIVI NKKI+DTD EQKGQNIKIQNP
Sbjct: 61  VSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120

Query: 121 RA---IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPP--------ARTTSFIVLVPLI 180
           R    IRD +QLEEKLQ+ALNGL+ YKKLFA ASS LPP        ARTTSFIVLVPL+
Sbjct: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLV 180

Query: 181 VFCARCIIGASSARVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPIDS 240
           +FC RCIIGAS ARVFGTLKL+ ++K+EGE HKFRSGHWRSALRDIRE+DGLDCE+PIDS
Sbjct: 181 IFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDS 240

Query: 241 SSP-EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 277
           +SP EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 TSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286

[Close]

BLAST of HG10003429 vs. ExPASy TrEMBL
Match: A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 208/272 (76.47%), Postives = 227/272 (83.46%), Query Frame = 0


Query: 1   MEVKLSQRNRADRFSLLPKLLPHSTLPSLTHRNWANTRRSFKNQFRAIAMRWRFQLQDIS 60
           ME+K+SQRNRADRFSLLPKLLP  TLPS THR WA  +RS KNQF A+A+RWRFQLQDI 
Sbjct: 1   MELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIP 60

Query: 61  KDQLSTKHQFVHIIEGRESLTSISNQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRA 120
           +DQ  TKH FV I+EG E+ TSI  QNG   HSIVI N+KI DTDLE KGQ+ KI+NP A
Sbjct: 61  RDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLA 120

Query: 121 IRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPPARTTSFIVLVPLIVFCARCIIGASSA 180
           IRDVYQL+EKLQS+LNGL+NYKKLF   S  LPPARTTSFIVLVPLIVFCARCIIGAS A
Sbjct: 121 IRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYA 180

Query: 181 RVFGTLKLETVDKREGEHHKFRSGHWRSALRDIREVDGLDCESPID---SSSPE-DEQIS 240
           RV  T KL+T+DK EGEHHKFRSGHWRSALRDIRE+DGLD ES  D   S+SP  DEQIS
Sbjct: 181 RVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQIS 240

Query: 241 VEDLSHAYKKLDQDYEKFLSECGLSKWGYWRG 269
           VEDLSHAYKKLD+DYEKFLSECGLS  GYWRG
Sbjct: 241 VEDLSHAYKKLDKDYEKFLSECGLSNCGYWRG 272

[Close]

BLAST of HG10003429 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-11
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = 0


Query: 44  QFRAIAMRWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANK 103
           +F+  + R RF +Q +S+++  TKH+     +  ESL  I  Q G    +P  S    + 
Sbjct: 28  RFKRASERCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSS 87

Query: 104 KIMDTDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASS 163
           ++ D D E+K   +         K+     + D+ ++E+  ++    +     L  Q   
Sbjct: 88  RLDDLDCEEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQ 147

Query: 164 HLPPARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHW 223
            LP   T   +  L+P++ FC  CIIG           L T+  R   +G HH   S  W
Sbjct: 148 ILPHLNTGVLLTSLLPVLGFCIICIIGT----------LHTIISRKTSQGHHH--GSERW 207

Query: 224 RSALRDIRE---VDGLDCESP-IDSSSPEDEQISVEDLSHAYKKLDQDYEKFLSECGLSK 263
           R+AL D  E    DG D  SP    +S   E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 208 RTALMDWNEPLASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

[Close]

BLAST of HG10003429 vs. TAIR 10
Match: AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 63/233 (27.04%), Postives = 108/233 (46.35%), Query Frame = 0


Query: 48  IAMRWRFQLQDISKDQLSTKHQFVHIIEGRESLTSISNQNG----DPAHSIVIANKKIMD 107
           ++ +W F +Q +S+++  TKH+     +  ESL  I  Q G    +P  S    + ++ D
Sbjct: 1   MSSKW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSSRLDD 60

Query: 108 TDLEQKGQNI---------KIQNPRAIRDVYQLEEKLQSALNGLRNYKKLFAQASSHLPP 167
            D E+K   +         K+     + D+ ++E+  ++    +     L  Q    LP 
Sbjct: 61  LDCEEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQILPH 120

Query: 168 ARTTSFIV-LVPLIVFCARCIIGASSARVFGTLKLETVDKR---EGEHHKFRSGHWRSAL 227
             T   +  L+P++ FC  CIIG           L T+  R   +G HH   S  WR+AL
Sbjct: 121 LNTGVLLTSLLPVLGFCIICIIGT----------LHTIISRKTSQGHHH--GSERWRTAL 180

Query: 228 RDIREVDGLDCESPIDSSSPE-DEQISVEDLSHAYKKLDQDYEKFLSECGLSK 263
            D  E    D     DS SPE  E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 181 MDWNEPLASDGH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211

The following BLAST results are available for this feature:

BLAST of HG10003429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890844.1	7.6e-133	88.13	uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida]	[more]
KAA0039254.1	1.9e-120	80.50	uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00...	[more]
XP_008459633.1	2.5e-120	80.14	PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]	[more]
XP_011656102.1	2.1e-119	80.78	uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hy...	[more]
XP_011656104.1	2.1e-119	80.78	uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus]	[more]

BLAST of HG10003429 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10003429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6Z4	9.4e-121	80.50	LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CBV5	1.2e-120	80.14	uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KSX5	1.0e-119	80.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1	[more]
A0A1S3CB50	2.0e-118	77.93	uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CKQ6	1.1e-108	76.47	uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10003429 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09970.1	3.5e-11	27.08	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP...	[more]
AT4G09970.2	1.5e-09	27.04	unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 237..257
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 70..115 score: 9.062065

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003429.1	HG10003429.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane