HG10003395 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003395
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ran-binding protein 10
Location	Chr08: 630763 .. 631857 (+)
RNA-Seq Expression	HG10003395
Synteny	HG10003395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAATCACAGCAACATTAGCAACAGCCTCAACAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGGCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTCAATCTTCACGGCTACGATGTTGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGTCTTGTCTACTACTTCGAGATTCATGTAAAGGACGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGGTTGGGACACGCTTTCTCTATCTCTCTTTCTTTCTTGATTCGTTTTTCGTTTTTTCTTTGATTGTCTTGATTATGTGTATTATTTCTCTATCACTAGGAAGTGTTACGAATGTGCCTTTTTATTGGAATTGATTGATAAATGGAATTGAATACAGTATCTGCAATCATCGAGTTAGTGTTTATCTTTATAATCCTTTAGTGGATGTAACTCAGTTTGGCTCAATCTTTTGCATTTTCCTGAAATATCTCCCCCCCTTCTGATTCTAAGCTTAAAAAAAAAATACTCATATGCGCTGTCCTGTTAATTTGGACGAGTAGGTGGGAGCCTAATAGCTGTGGATATCATGGAGATGACGGACTACTTTATCGTGGATTAGGTAAGAAAGAACCTTTTGGTCCAACATATACATCTGGTGATACGGTTGGTGCCGGCATTAATTACGCCTCACAGGAATTCTTTTTCACGTAAGACATTCGCACACTGTAATTGTTTTTGTAGTTTTTTTTAAAGGTTATCATCATGATACTTTATGATTCTTTCTGTCGATGTACCAGAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAATGAAGAGTATGCTCGTCATCAAACTTTTATCCCCTTGACACTTTGTTTGCATATACGTTATCTATTCTGA

mRNA sequence

ATGAACAATCACAGCAACATTAGCAACAGCCTCAACAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGGCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTCAATCTTCACGGCTACGATGTTGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGTCTTGTCTACTACTTCGAGATTCATGTAAAGGACGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGGTGGGAGCCTAATAGCTGTGGATATCATGGAGATGACGGACTACTTTATCGTGGATTAGGTAAGAAAGAACCTTTTGGTCCAACATATACATCTGGTGATACGGTTGGTGCCGGCATTAATTACGCCTCACAGGAATTCTTTTTCACAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAATGAAGAGTATGCTCGTCATCAAACTTTTATCCCCTTGACACTTTGTTTGCATATACGTTATCTATTCTGA

Coding sequence (CDS)

ATGAACAATCACAGCAACATTAGCAACAGCCTCAACAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGGCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTCAATCTTCACGGCTACGATGTTGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGTCTTGTCTACTACTTCGAGATTCATGTAAAGGACGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGGTGGGAGCCTAATAGCTGTGGATATCATGGAGATGACGGACTACTTTATCGTGGATTAGGTAAGAAAGAACCTTTTGGTCCAACATATACATCTGGTGATACGGTTGGTGCCGGCATTAATTACGCCTCACAGGAATTCTTTTTCACAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAATGAAGAGTATGCTCGTCATCAAACTTTTATCCCCTTGACACTTTGTTTGCATATACGTTATCTATTCTGA

Protein sequence

MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNEEYARHQTFIPLTLCLHIRYLF

Homology

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BLAST of HG10003395 vs. NCBI nr
Match: XP_011656119.1 (ran-binding protein M homolog [Cucumis sativus] >KGN52712.1 hypothetical protein Csa_007848 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNSLNN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSLNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

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BLAST of HG10003395 vs. NCBI nr
Match: XP_038889904.1 (ran-binding protein M homolog [Benincasa hispida])

HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 203/208 (97.60%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLE+ARLGLPRG+CDMDEDEESPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNNTTSTSPQDLGLHFLEVARLGLPRGICDMDEDEESPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVTTDKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

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BLAST of HG10003395 vs. NCBI nr
Match: XP_008459671.1 (PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

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BLAST of HG10003395 vs. NCBI nr
Match: XP_008459672.1 (PREDICTED: ran-binding protein 9 isoform X2 [Cucumis melo])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

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BLAST of HG10003395 vs. NCBI nr
Match: KAA0039223.1 (ran-binding protein 9 isoform X2 [Cucumis melo var. makuwa] >TYK00411.1 ran-binding protein 9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

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BLAST of HG10003395 vs. ExPASy Swiss-Prot
Match: F4HYD7 (Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.4e-80
Identity = 148/210 (70.48%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTST--SPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSS 60
           MN+    +NS N  TT+   + QDL L+FL+  RL   R   + DE EE PTELNTINS+
Sbjct: 1   MNSSPPPANSANGDTTNNGENGQDLNLNFLDKIRLSAKRDAKE-DEGEELPTELNTINSA 60

Query: 61  GGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGF 120
           GGFL+V+ DKLSVKYTN NLHG+DVGVVQANKPAP+K L YYFEI VKD+G KGQIAIGF
Sbjct: 61  GGFLVVSPDKLSVKYTNTNLHGHDVGVVQANKPAPIKCLTYYFEIFVKDSGIKGQIAIGF 120

Query: 121 TTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFF 180
           T ESFKMRRQPGWE NSCGYHGDDG LYRG GK EPFGP +T  D VG GINYASQEFFF
Sbjct: 121 TKESFKMRRQPGWEVNSCGYHGDDGYLYRGQGKGEPFGPKFTKDDAVGGGINYASQEFFF 180

Query: 181 TKNGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           TKNG +VG + KD++G LFPT+AVHSQNEE
Sbjct: 181 TKNGTIVGKIPKDIRGHLFPTVAVHSQNEE 209

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BLAST of HG10003395 vs. ExPASy Swiss-Prot
Match: Q4Z8K6 (Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster OX=7227 GN=RanBPM PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 52/145 (35.86%), Postives = 81/145 (55.86%), Query Frame = 0


Query: 64  VTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESF 123
           ++ + L V Y  V     D   V+   P P    +YYFE+ +   G  G + IG T + F
Sbjct: 433 LSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQF 492

Query: 124 KMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTKNGI 183
           +M R PGW+  S GYHGDDG  +   G  + +GPT+T+GD +G  +N+ +   F+TKNG+
Sbjct: 493 RMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGV 552

Query: 184 VVGAVEKDMKGPLFPTIAVHSQNEE 209
            +G   +D+   L+PT+ + +  EE
Sbjct: 553 DLGIAFRDLPTKLYPTVGLQTPGEE 577

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BLAST of HG10003395 vs. ExPASy Swiss-Prot
Match: Q1LUS8 (Ran-binding protein 10 OS=Danio rerio OX=7955 GN=ranbp10 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           ++ ++ + L V Y     +  D   V+A  P P    +YYFE+ +   G  G + IG + 
Sbjct: 53  YIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSA 112

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           +   M R PGW+ +S GYHGDDG  +   G  +P+GPT+T+GD +G  +N  +   F+TK
Sbjct: 113 QGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTK 172

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNE 208
           NG  +G    D+   L+PT+ + +  E
Sbjct: 173 NGHSLGVAFTDLPPNLYPTVGLQTPGE 199

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BLAST of HG10003395 vs. ExPASy Swiss-Prot
Match: A3KMV8 (Ran-binding protein 10 OS=Bos taurus OX=9913 GN=RANBP10 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           ++ ++   L V Y     +  D   V+A  P P    +YYFE+ +   G  G + IG + 
Sbjct: 65  YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSA 124

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           +   M R PGW+ +S GYHGDDG  +   G  +P+GPT+T+GD +G  +N  +   F+TK
Sbjct: 125 QGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTK 184

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNE 208
           NG  +G    D+   L+PT+ + +  E
Sbjct: 185 NGHSLGIAFTDLPANLYPTVGLQTPGE 211

[Close]

BLAST of HG10003395 vs. ExPASy Swiss-Prot
Match: Q6VN20 (Ran-binding protein 10 OS=Homo sapiens OX=9606 GN=RANBP10 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           ++ ++   L V Y     +  D   V+A  P P    +YYFE+ +   G  G + IG + 
Sbjct: 65  YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSA 124

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           +   M R PGW+ +S GYHGDDG  +   G  +P+GPT+T+GD +G  +N  +   F+TK
Sbjct: 125 QGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTK 184

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNE 208
           NG  +G    D+   L+PT+ + +  E
Sbjct: 185 NGHSLGIAFTDLPANLYPTVGLQTPGE 211

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BLAST of HG10003395 vs. ExPASy TrEMBL
Match: A0A0A0KW89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G651700 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNSLNN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSLNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

[Close]

BLAST of HG10003395 vs. ExPASy TrEMBL
Match: A0A5A7T8C1 (Ran-binding protein 9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00100 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

[Close]

BLAST of HG10003395 vs. ExPASy TrEMBL
Match: A0A1S3CB75 (ran-binding protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498719 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

[Close]

BLAST of HG10003395 vs. ExPASy TrEMBL
Match: A0A1S3CBY5 (ran-binding protein 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498719 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISNS+NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK
Sbjct: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

[Close]

BLAST of HG10003395 vs. ExPASy TrEMBL
Match: A0A6J1DLW3 (ran-binding protein 10 OS=Momordica charantia OX=3673 GN=LOC111022376 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108
Identity = 193/208 (92.79%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNH+NISN++N+ TT   PQDLGL FLEMARLGLPRG+CDMDEDEESPTELNTINSSGG
Sbjct: 1   MNNHTNISNNVNSGTT---PQDLGLKFLEMARLGLPRGICDMDEDEESPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLV TDKLSVKYTNVNLHG+DVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVATDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFFTK 180
           +SFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINY SQEFFFTK
Sbjct: 121 DSFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYTSQEFFFTK 180

Query: 181 NGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           NGI+VGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 181 NGIIVGAVEKDMKGPLFPTIAVHSQNEE 205

[Close]

BLAST of HG10003395 vs. TAIR 10
Match: AT1G35470.1 (SPla/RYanodine receptor (SPRY) domain-containing protein )

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-81
Identity = 148/210 (70.48%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTST--SPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSS 60
           MN+    +NS N  TT+   + QDL L+FL+  RL   R   + DE EE PTELNTINS+
Sbjct: 1   MNSSPPPANSANGDTTNNGENGQDLNLNFLDKIRLSAKRDAKE-DEGEELPTELNTINSA 60

Query: 61  GGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGF 120
           GGFL+V+ DKLSVKYTN NLHG+DVGVVQANKPAP+K L YYFEI VKD+G KGQIAIGF
Sbjct: 61  GGFLVVSPDKLSVKYTNTNLHGHDVGVVQANKPAPIKCLTYYFEIFVKDSGIKGQIAIGF 120

Query: 121 TTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFF 180
           T ESFKMRRQPGWE NSCGYHGDDG LYRG GK EPFGP +T  D VG GINYASQEFFF
Sbjct: 121 TKESFKMRRQPGWEVNSCGYHGDDGYLYRGQGKGEPFGPKFTKDDAVGGGINYASQEFFF 180

Query: 181 TKNGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           TKNG +VG + KD++G LFPT+AVHSQNEE
Sbjct: 181 TKNGTIVGKIPKDIRGHLFPTVAVHSQNEE 209

[Close]

BLAST of HG10003395 vs. TAIR 10
Match: AT1G35470.2 (SPla/RYanodine receptor (SPRY) domain-containing protein )

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-81
Identity = 148/210 (70.48%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MNNHSNISNSLNNSTTST--SPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSS 60
           MN+    +NS N  TT+   + QDL L+FL+  RL   R   + DE EE PTELNTINS+
Sbjct: 1   MNSSPPPANSANGDTTNNGENGQDLNLNFLDKIRLSAKRDAKE-DEGEELPTELNTINSA 60

Query: 61  GGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGF 120
           GGFL+V+ DKLSVKYTN NLHG+DVGVVQANKPAP+K L YYFEI VKD+G KGQIAIGF
Sbjct: 61  GGFLVVSPDKLSVKYTNTNLHGHDVGVVQANKPAPIKCLTYYFEIFVKDSGIKGQIAIGF 120

Query: 121 TTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPFGPTYTSGDTVGAGINYASQEFFF 180
           T ESFKMRRQPGWE NSCGYHGDDG LYRG GK EPFGP +T  D VG GINYASQEFFF
Sbjct: 121 TKESFKMRRQPGWEVNSCGYHGDDGYLYRGQGKGEPFGPKFTKDDAVGGGINYASQEFFF 180

Query: 181 TKNGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           TKNG +VG + KD++G LFPT+AVHSQNEE
Sbjct: 181 TKNGTIVGKIPKDIRGHLFPTVAVHSQNEE 209

[Close]

BLAST of HG10003395 vs. TAIR 10
Match: AT4G09340.1 (SPla/RYanodine receptor (SPRY) domain-containing protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.0e-69
Identity = 118/173 (68.21%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 36  PRGLCDMDEDEESPTELNTINSSGGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVK 95
           P  + D +E+EESPTELNTI    GF++++ DKLS+KYT V+ HG+DVGVVQANKPAP K
Sbjct: 16  PHTMEDNEEEEESPTELNTITGLSGFVVISPDKLSLKYTGVSQHGHDVGVVQANKPAPCK 75

Query: 96  RLVYYFEIHVKDAGAKGQIAIGFTTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKEPF 155
           R  YYFEI+VKDAG KG+++IGFTT SF++ R PGWE N+CGYHG+DGL+Y G  + E F
Sbjct: 76  RFAYYFEIYVKDAGVKGRVSIGFTTNSFRIARHPGWELNTCGYHGEDGLIYLGKRQGEAF 135

Query: 156 GPTYTSGDTVGAGINYASQEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNEE 209
           GPTYT+GDTVG GINY SQEFFFT NG +VG V K +KGPLFPT+AVHSQNEE
Sbjct: 136 GPTYTTGDTVGGGINYDSQEFFFTVNGTLVGTVSKYIKGPLFPTVAVHSQNEE 188

[Close]

BLAST of HG10003395 vs. TAIR 10
Match: AT4G09200.1 (SPla/RYanodine receptor (SPRY) domain-containing protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 74/169 (43.79%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 43  DEDEESPTELNTINSSGGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFE 102
           +E+E  PT L T+  S  F  V+ D LS +YT  +   +D  V+Q   PAP   L YYFE
Sbjct: 6   EEEELRPTALYTVGGSDEFTFVSPDGLSGQYTGPD---HDGVVLQTENPAPTNCLAYYFE 65

Query: 103 IHVKDAGAKGQIAIGFTTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKE----PFGPT 162
           +H+ +AG KG+IAIGF+ E        G+   SC Y G+ GL+    G  +        T
Sbjct: 66  VHIMNAGEKGEIAIGFSKEHI---YSEGYTVRSCAYIGNSGLICSQNGDGDRTVAKASDT 125

Query: 163 YTSGDTVGAGINYASQEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNE 208
           YT+GD VG GI+  SQEFFFTKNG +VG + +  + P++PTI +HSQNE
Sbjct: 126 YTTGDLVGCGIDSVSQEFFFTKNGTIVGTIPRQFRRPVYPTIVLHSQNE 168

[Close]

BLAST of HG10003395 vs. TAIR 10
Match: AT4G09310.1 (SPla/RYanodine receptor (SPRY) domain-containing protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 74/169 (43.79%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 43  DEDEESPTELNTINSSGGFLLVTTDKLSVKYTNVNLHGYDVGVVQANKPAPVKRLVYYFE 102
           +E+E  PT L T+  S  F  V+ D LS +YT  +   +D  V+Q   PAP   L YYFE
Sbjct: 6   EEEELRPTALYTVGGSDEFTFVSPDGLSGQYTGPD---HDGVVLQTENPAPTNCLAYYFE 65

Query: 103 IHVKDAGAKGQIAIGFTTESFKMRRQPGWEPNSCGYHGDDGLLYRGLGKKE----PFGPT 162
           +H+ +AG KG+IAIGF+ E        G+   SC Y G+ GL+    G  +        T
Sbjct: 66  VHIMNAGEKGEIAIGFSKEHI---YSEGYTVRSCAYIGNSGLICSQNGDGDRTVAKASDT 125

Query: 163 YTSGDTVGAGINYASQEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNE 208
           YT+GD VG GI+  SQEFFFTKNG +VG + +  + P++PTI +HSQNE
Sbjct: 126 YTTGDLVGCGIDSVSQEFFFTKNGTIVGTIPRQFRRPVYPTIVLHSQNE 168

The following BLAST results are available for this feature:

BLAST of HG10003395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656119.1	1.0e-114	98.08	ran-binding protein M homolog [Cucumis sativus] >KGN52712.1 hypothetical protein...	[more]
XP_038889904.1	1.0e-114	97.60	ran-binding protein M homolog [Benincasa hispida]	[more]
XP_008459671.1	2.2e-114	97.60	PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo]	[more]
XP_008459672.1	2.2e-114	97.60	PREDICTED: ran-binding protein 9 isoform X2 [Cucumis melo]	[more]
KAA0039223.1	2.2e-114	97.60	ran-binding protein 9 isoform X2 [Cucumis melo var. makuwa] >TYK00411.1 ran-bind...	[more]

BLAST of HG10003395 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HYD7	6.4e-80	70.48	Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=...	[more]
Q4Z8K6	1.1e-26	35.86	Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster OX=7227 GN=RanBPM P...	[more]
Q1LUS8	2.2e-24	34.01	Ran-binding protein 10 OS=Danio rerio OX=7955 GN=ranbp10 PE=3 SV=1	[more]
A3KMV8	5.0e-24	34.01	Ran-binding protein 10 OS=Bos taurus OX=9913 GN=RANBP10 PE=2 SV=1	[more]
Q6VN20	5.0e-24	34.01	Ran-binding protein 10 OS=Homo sapiens OX=9606 GN=RANBP10 PE=1 SV=1	[more]

BLAST of HG10003395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW89	4.9e-115	98.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G651700 PE=4 SV=1	[more]
A0A5A7T8C1	1.1e-114	97.60	Ran-binding protein 9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CB75	1.1e-114	97.60	ran-binding protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498719 PE=4 S...	[more]
A0A1S3CBY5	1.1e-114	97.60	ran-binding protein 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498719 PE=4 SV...	[more]
A0A6J1DLW3	1.5e-108	92.79	ran-binding protein 10 OS=Momordica charantia OX=3673 GN=LOC111022376 PE=4 SV=1	[more]

BLAST of HG10003395 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35470.1	4.5e-81	70.48	SPla/RYanodine receptor (SPRY) domain-containing protein	[more]
AT1G35470.2	4.5e-81	70.48	SPla/RYanodine receptor (SPRY) domain-containing protein	[more]
AT4G09340.1	1.0e-69	68.21	SPla/RYanodine receptor (SPRY) domain-containing protein	[more]
AT4G09200.1	2.1e-33	43.79	SPla/RYanodine receptor (SPRY) domain-containing protein	[more]
AT4G09310.1	2.1e-33	43.79	SPla/RYanodine receptor (SPRY) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003877	SPRY domain	SMART	SM00449	SPRY_3	coord: 96..215 e-value: 1.6E-15 score: 67.6
IPR003877	SPRY domain	PFAM	PF00622	SPRY	coord: 99..206 e-value: 1.4E-19 score: 70.3
IPR043136	B30.2/SPRY domain superfamily	GENE3D	2.60.120.920		coord: 40..214 e-value: 8.8E-45 score: 155.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR12864:SF49	RAN-BINDING PROTEIN M HOMOLOG	coord: 39..208
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 39..208
IPR001870	B30.2/SPRY domain	PROSITE	PS50188	B302_SPRY	coord: 30..218 score: 16.955912
IPR044736	Ran-binding protein Vid30/RanBPM/SPLA, SPRY domain	CDD	cd12885	SPRY_RanBP_like	coord: 84..208 e-value: 2.35298E-53 score: 166.301
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 49..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003395.1	HG10003395.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007010	cytoskeleton organization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding