HG10003373 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003373
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA-binding storekeeper protein-related transcriptional regulator
Location	Chr08: 208148 .. 208804 (+)
RNA-Seq Expression	HG10003373
Synteny	HG10003373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTAGGAGGTATGGAAAGAAAAAATGATATTGTGCAGAAGAAGCAAGGGATGAAAGAGAAATATTATGAAGCACCCAGTTGTGGTGAGTTGAAGAAGACACTGAGGCAAAAAGATACATTGGGATGGAGTAAAGAGGATGAATTAATTGTCCTTGGGAAGCTGTTGGAATTTTCAAGGCAAAATAAGAATCCAAATTATTACACTAGTCAATTCTACATGTATGTGAACAAAATGTTAAGTGTTCAACTGTCGGAGAATCAATTGTGTTACATGATATATTGTTTAAGAAAACAATATTTAGATTCAAAGGATGATGATAATTTGGATTGGAATGAGAGGGTCAGAGCTTTGGAATTATCAGATAAAATATGGGGAGGAGGTGATAGGAATATTAAGGGGTGGCCGGCAAAGACAAAAGTGATGAGAGATAATTATGAGGAATATTTGAAAGATTATGTTGTTGAAGAATTAGGGTTTCCGGTGGAATGCTTGTCGGCTTCTATTGTTGAGGAAATTAAGAAAGATTGGGAACATTTTCGATTTGTTGAGGATGAGTTTCGAACTATGCAACATAGATTTACTTTGCAACTTTGTCAACTCAACAACAACATTATTCATAATACTCAAACTTCAACTACTTCAAATCTTTAA

mRNA sequence

ATGAATGTAGGAGGTATGGAAAGAAAAAATGATATTGTGCAGAAGAAGCAAGGGATGAAAGAGAAATATTATGAAGCACCCAGTTGTGGTGAGTTGAAGAAGACACTGAGGCAAAAAGATACATTGGGATGGAGTAAAGAGGATGAATTAATTGTCCTTGGGAAGCTGTTGGAATTTTCAAGGCAAAATAAGAATCCAAATTATTACACTAGTCAATTCTACATGTATGTGAACAAAATGTTAAGTGTTCAACTGTCGGAGAATCAATTGTGTTACATGATATATTGTTTAAGAAAACAATATTTAGATTCAAAGGATGATGATAATTTGGATTGGAATGAGAGGGTCAGAGCTTTGGAATTATCAGATAAAATATGGGGAGGAGGTGATAGGAATATTAAGGGGTGGCCGGCAAAGACAAAAGTGATGAGAGATAATTATGAGGAATATTTGAAAGATTATGTTGTTGAAGAATTAGGGTTTCCGGTGGAATGCTTGTCGGCTTCTATTGTTGAGGAAATTAAGAAAGATTGGGAACATTTTCGATTTGTTGAGGATGAGTTTCGAACTATGCAACATAGATTTACTTTGCAACTTTGTCAACTCAACAACAACATTATTCATAATACTCAAACTTCAACTACTTCAAATCTTTAA

Coding sequence (CDS)

ATGAATGTAGGAGGTATGGAAAGAAAAAATGATATTGTGCAGAAGAAGCAAGGGATGAAAGAGAAATATTATGAAGCACCCAGTTGTGGTGAGTTGAAGAAGACACTGAGGCAAAAAGATACATTGGGATGGAGTAAAGAGGATGAATTAATTGTCCTTGGGAAGCTGTTGGAATTTTCAAGGCAAAATAAGAATCCAAATTATTACACTAGTCAATTCTACATGTATGTGAACAAAATGTTAAGTGTTCAACTGTCGGAGAATCAATTGTGTTACATGATATATTGTTTAAGAAAACAATATTTAGATTCAAAGGATGATGATAATTTGGATTGGAATGAGAGGGTCAGAGCTTTGGAATTATCAGATAAAATATGGGGAGGAGGTGATAGGAATATTAAGGGGTGGCCGGCAAAGACAAAAGTGATGAGAGATAATTATGAGGAATATTTGAAAGATTATGTTGTTGAAGAATTAGGGTTTCCGGTGGAATGCTTGTCGGCTTCTATTGTTGAGGAAATTAAGAAAGATTGGGAACATTTTCGATTTGTTGAGGATGAGTTTCGAACTATGCAACATAGATTTACTTTGCAACTTTGTCAACTCAACAACAACATTATTCATAATACTCAAACTTCAACTACTTCAAATCTTTAA

Protein sequence

MNVGGMERKNDIVQKKQGMKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYLDSKDDDNLDWNERVRALELSDKIWGGGDRNIKGWPAKTKVMRDNYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEFRTMQHRFTLQLCQLNNNIIHNTQTSTTSNL

Homology

[Close]

BLAST of HG10003373 vs. NCBI nr
Match: KAG6607616.1 (hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-45
Identity = 104/197 (52.79%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 19  MKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVN 78
           MK   YEAP+C EL K L ++ +LGWSK DE+IVL KL EF  Q+K+ NYYTSQFY  V+
Sbjct: 1   MKHNSYEAPTCVELNKILGKQYSLGWSKRDEVIVLEKLCEFEGQHKSANYYTSQFYNSVH 60

Query: 79  KMLSVQLSENQLCYMIYCLRKQYLDSKDDDNLDWNERVRALELSDKIWGGGDRNIKGWPA 138
           K LSV + +NQLCYMIYCLRKQYL+++ + + D    ++ +ELS K+W            
Sbjct: 61  KKLSVDIPQNQLCYMIYCLRKQYLENEKNSDRD---DLKVVELSAKLW--------EVDT 120

Query: 139 KTKVMRDNYE-EYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEFRTMQHRFTL 198
           KTKV+ D+Y  E+LK YVV+ LG   +CL++ +VE+IK+DW+ FR VEDEFR++Q RF L
Sbjct: 121 KTKVVSDDYYLEHLKVYVVQVLGIGADCLTSCVVEKIKEDWKEFRLVEDEFRSIQARFNL 180

Query: 199 QLCQLNNNIIHNTQTST 215
           QLC+L  + +HNTQ  T
Sbjct: 181 QLCELAGD-MHNTQLET 185

[Close]

BLAST of HG10003373 vs. NCBI nr
Match: XP_022158998.1 (probable transcription factor At4g01260 [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-10
Identity = 58/217 (26.73%), Postives = 103/217 (47.47%), Query Frame = 0


Query: 5   GMERKNDIVQKKQGMK---EKYYEAPSCGELKKTLRQKDTLG--WSKEDELIVLGKLLEF 64
           G E +++  +K   +K   EK  E  S    K+  ++   +G  WS  DE ++L    EF
Sbjct: 20  GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEF 79

Query: 65  SRQNKNPNYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYLDSKDDDNL-----DWNE 124
           + +N +   Y+  FY +V   LSV +S +QL   +Y LRK++L  +    +       N+
Sbjct: 80  AGKNGS---YSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQ 139

Query: 125 RVRALELSDKIWGGGD--RNIKGWPAKTKVMRDN-YEEYLKDYVVEELGFPVECLSASIV 184
             +  E+S+ IWG     +N +    + K    N   E + + V+E +   + C+  +++
Sbjct: 140 LEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVL 199

Query: 185 EEIKKDWEHFRFVEDEFRTMQHRFTLQL----CQLNN 205
            +I+KDWE  +  +DE+        LQ+    C  NN
Sbjct: 200 XDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQNN 233

[Close]

BLAST of HG10003373 vs. NCBI nr
Match: XP_038877618.1 (STOREKEEPER protein-like [Benincasa hispida])

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-09
Identity = 51/178 (28.65%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 31  ELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVNKMLSVQLSENQL 90
           E +K  ++K    WS  DE  +L    EF+ +N N   Y+  FY +V   LS ++S +QL
Sbjct: 2   EEEKESKEKMPFRWSSTDECTILENFYEFAGKNGN---YSKAFYHFVKGKLSGEVSNSQL 61

Query: 91  CYMIYCLRKQYLDSKDDDNLDWNER-----VRALELSDKIWGGGDRNIK-----GWPA-- 150
              +Y LRK+++ +K +DN + N R      +  ELS  IWG    N K     G P+  
Sbjct: 62  STKVYRLRKRFMKNKRNDNNNNNMREKFPDEKVFELSRNIWGDDQENPKSTIGGGGPSSS 121

Query: 151 --------KTKVMRDNYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEF 189
                   K + +   YE+  K + +E +   V  +   ++E+++K+WE  R   +++
Sbjct: 122 SSINIIQWKPEEVERFYEKRFKIF-LENMKLDVTSIPTHVLEDVRKEWEDVRRARNDY 175

[Close]

BLAST of HG10003373 vs. NCBI nr
Match: XP_023521141.1 (probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-08
Identity = 55/176 (31.25%), Postives = 90/176 (51.14%), Query Frame = 0


Query: 33  KKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVNKML-SVQLSENQLC 92
           KK ++++  L W +EDE+IVL +L +F   N +   Y+  FY +V K L + Q+S NQ+ 
Sbjct: 45  KKRIKRR-VLEWEEEDEIIVLQQLYQFGGSNAS---YSKAFYEFVKKRLNNNQVSMNQMS 104

Query: 93  YMIYCLRKQYLDS---KDDDNLDWNE--RVRALELSDKIWGGGDRNIKGWPAKTKVMRDN 152
             I   +K+YL +   K  ++L ++E        LS +IWGG      G   K       
Sbjct: 105 NKIDRFKKEYLKNECRKKVNDLKFSEYHEFEVFMLSRRIWGGKRSKSNGGRMK---YAKG 164

Query: 153 YEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEFRTMQHRFTLQLCQL 203
           + EYL     EE+   ++CL+ S +E  KK+WE    +  E  + + +F  +L +L
Sbjct: 165 FSEYL-----EEMDIDIDCLTPSCLEHFKKEWEVQLLMYIELLSKKSKFDAKLMEL 208

[Close]

BLAST of HG10003373 vs. NCBI nr
Match: XP_022951915.1 (probable transcription factor At1g66420 [Cucurbita moschata])

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-08
Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 15  KKQGMKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFY 74
           +++  +E   ++ S     K   ++  L W +EDE+IVL +L +F   N +   Y+  FY
Sbjct: 26  EEESSEESEEQSKSNNNSSKKRIKRRVLEWEEEDEIIVLQQLYQFGGSNAS---YSKAFY 85

Query: 75  MYVNKML-SVQLSENQLCYMIYCLRKQYLDS---KDDDNLDWNE--RVRALELSDKIWGG 134
            +V K L + Q+S +QL   I   +K+YL +   K +++L ++E        LS +IWGG
Sbjct: 86  EFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKENDLKFSEYHEFEVFMLSRRIWGG 145

Query: 135 GDRNIKGWPAKTKVMRDNYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEF 194
                 G   K       + EYL     EE+   ++CL+ S +E  KK+WE    +  E 
Sbjct: 146 KRSKSNGGRMK---YAKGFLEYL-----EEMDIDIDCLTPSCLEHFKKEWEVQLLMYIEL 205

Query: 195 RTMQHRFTLQLCQL 203
            + + +F  +L +L
Sbjct: 206 LSKKSKFDAKLMEL 208

[Close]

BLAST of HG10003373 vs. ExPASy Swiss-Prot
Match: Q9SYA9 (Probable transcription factor At1g61730 OS=Arabidopsis thaliana OX=3702 GN=At1g61730 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 16  KQGMKEKYYEAPSCGELKKTLRQKDTLG--------WSKEDELIVLGKLLEFSRQ-NKNP 75
           K G K    EA +    K+  + ++++         WS+EDE++VL  +++F     K+P
Sbjct: 123 KSGTKRPASEAAATTSTKRVKKDEESVKKPGGFQRLWSEEDEILVLQGMIDFKADTGKSP 182

Query: 76  NYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYL--DSKDDDNLDWNERVRALELSDK 128
              T+ FY ++ K +S ++S+NQ    I  LRK+Y+  + +++ +       +A ELS  
Sbjct: 183 YVDTNAFYDFLKKSISFEVSKNQFMDKIRSLRKKYIGKEGRNEPSFVKAHDKKAFELSKF 242

[Close]

BLAST of HG10003373 vs. ExPASy Swiss-Prot
Match: C0SUU6 (Probable transcription factor At1g11510 OS=Arabidopsis thaliana OX=3702 GN=At1g11510 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.1e-04
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 14  QKKQGMKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQF 73
           +K  G +EK        E KKT  Q+    W+++DE++VL  L++  +     N  T++ 
Sbjct: 115 KKVSGEEEKKKSGGGGEETKKTYFQR---LWTEDDEIVVLQGLIDDKKDTGVSN--TNKV 174

Query: 74  YMYVNKMLSVQLSENQLCYMIYCLRKQYLDS--KDDDNLDWN----ERVRALELSDKIWG 129
           Y  V K +S  +S+NQL   +  L+K+Y ++  K  D ++         +A ELS  +WG
Sbjct: 175 YELVKKSISFDVSKNQLMEKLRALKKKYENNLGKAKDGVEPTFVKPHDRKAFELSKLVWG 230

[Close]

BLAST of HG10003373 vs. ExPASy TrEMBL
Match: A0A6J1DXL5 (probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111025442 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-10
Identity = 58/217 (26.73%), Postives = 103/217 (47.47%), Query Frame = 0


Query: 5   GMERKNDIVQKKQGMK---EKYYEAPSCGELKKTLRQKDTLG--WSKEDELIVLGKLLEF 64
           G E +++  +K   +K   EK  E  S    K+  ++   +G  WS  DE ++L    EF
Sbjct: 20  GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEF 79

Query: 65  SRQNKNPNYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYLDSKDDDNL-----DWNE 124
           + +N +   Y+  FY +V   LSV +S +QL   +Y LRK++L  +    +       N+
Sbjct: 80  AGKNGS---YSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQ 139

Query: 125 RVRALELSDKIWGGGD--RNIKGWPAKTKVMRDN-YEEYLKDYVVEELGFPVECLSASIV 184
             +  E+S+ IWG     +N +    + K    N   E + + V+E +   + C+  +++
Sbjct: 140 LEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVL 199

Query: 185 EEIKKDWEHFRFVEDEFRTMQHRFTLQL----CQLNN 205
            +I+KDWE  +  +DE+        LQ+    C  NN
Sbjct: 200 XDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQNN 233

[Close]

BLAST of HG10003373 vs. ExPASy TrEMBL
Match: A0A6J1GK86 (probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC111454655 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-08
Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 15  KKQGMKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFY 74
           +++  +E   ++ S     K   ++  L W +EDE+IVL +L +F   N +   Y+  FY
Sbjct: 26  EEESSEESEEQSKSNNNSSKKRIKRRVLEWEEEDEIIVLQQLYQFGGSNAS---YSKAFY 85

Query: 75  MYVNKML-SVQLSENQLCYMIYCLRKQYLDS---KDDDNLDWNE--RVRALELSDKIWGG 134
            +V K L + Q+S +QL   I   +K+YL +   K +++L ++E        LS +IWGG
Sbjct: 86  EFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKENDLKFSEYHEFEVFMLSRRIWGG 145

Query: 135 GDRNIKGWPAKTKVMRDNYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEF 194
                 G   K       + EYL     EE+   ++CL+ S +E  KK+WE    +  E 
Sbjct: 146 KRSKSNGGRMK---YAKGFLEYL-----EEMDIDIDCLTPSCLEHFKKEWEVQLLMYIEL 205

Query: 195 RTMQHRFTLQLCQL 203
            + + +F  +L +L
Sbjct: 206 LSKKSKFDAKLMEL 208

[Close]

BLAST of HG10003373 vs. ExPASy TrEMBL
Match: A0A6J1I882 (probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471848 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-08
Identity = 55/177 (31.07%), Postives = 90/177 (50.85%), Query Frame = 0


Query: 32  LKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVNKMLS-VQLSENQL 91
           +KK ++++  L W +EDE+IVL +L EF   N +   Y+  FY +V K LS  Q+S +Q 
Sbjct: 44  IKKRIKRR-VLEWQEEDEIIVLQQLYEFGGSNAS---YSKAFYEFVKKRLSNNQVSMHQT 103

Query: 92  CYMIYCLRKQYLDS---KDDDNLDWNE--RVRALELSDKIWGGGDRNIKGWPAKTKVMRD 151
              I   +K+YL +   K +++L ++E        LS +IWG       G   K      
Sbjct: 104 SNKIDRFKKEYLKNECRKKENDLKFSEYHEFEVFMLSKRIWGARRSKSNGGGMK---YAK 163

Query: 152 NYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFVEDEFRTMQHRFTLQLCQL 203
            + EYL     EE+   ++CL+ S +E  KK+WE    +  E  + + +F  +L +L
Sbjct: 164 GFLEYL-----EEMDIDIDCLTPSCLEHFKKEWEVQLLMYIELLSKKSKFNGKLMEL 208

[Close]

BLAST of HG10003373 vs. ExPASy TrEMBL
Match: A0A5A7UKP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00330 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.6e-06
Identity = 58/212 (27.36%), Postives = 98/212 (46.23%), Query Frame = 0


Query: 20  KEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQFYMYVNK 79
           +EK     S G  KK  R+K    WSK +EL +L KL+EF+ +N +      +FY ++  
Sbjct: 55  EEKERRKSSLGSEKKK-RRKSLFEWSKGEELNLLKKLVEFNSKNIS----REEFYPFLRN 114

Query: 80  MLSVQLSENQLCYMIYCLRKQYLDSK--------------DDDNLDWNERVRALELSDKI 139
               ++S+ Q+   I  L+ +YL++K              DDD+ + ++R    ELS+++
Sbjct: 115 GSLAEVSKIQIFDKIQQLKSEYLENKLELRKMRKRNVKLEDDDDYN-DKRDEGFELSNQL 174

Query: 140 WGGGDRNIKGWPAKT-KVMRDNYEEYLKDYVVEELGFPVECLSASIVEEIKKDWEHFRFV 199
           WG  D   +   +K  +V   NY E       E  G  V+    S  +  KKD +H   +
Sbjct: 175 WGEVDETERASNSKALEVCSRNYYEGF----FESCGLDVQLFDPSFHDATKKDIDHLFNL 234

Query: 200 EDEFRTMQHRFTLQLCQLNNNIIHNTQTSTTS 217
           E      + + T Q+ QL  ++I     + T+
Sbjct: 235 EHHVILSKAKLTAQILQLKYDLIQARVNNPTN 256

[Close]

BLAST of HG10003373 vs. ExPASy TrEMBL
Match: A0A7J0DBS2 (DNA-binding storekeeper protein-related transcriptional regulator OS=Actinidia rufa OX=165716 GN=Acr_00g0019700 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 44  WSKEDELIVLGKLLEF-SRQNKNPNYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYL 103
           WS+EDE++VL  ++++ S++  +PN     FY ++ K L V +S NQL   +  L+K+Y 
Sbjct: 161 WSEEDEIVVLKGMIDYQSKKGADPNADMGAFYEFIKKSLRVDVSRNQLMDKVRRLKKKYR 220

Query: 104 ------DSKDDDNLDWNERVRALELSDKIWGGGDRNIKGWPAKT 141
                 +  +D         ++ ELS KIW GGD N     AK+
Sbjct: 221 TNVEKGEKGEDPVFSKPHEHKSFELSKKIWDGGDNNAVDGSAKS 264

[Close]

BLAST of HG10003373 vs. TAIR 10
Match: AT1G61730.1 (DNA-binding storekeeper protein-related transcriptional regulator )

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 16  KQGMKEKYYEAPSCGELKKTLRQKDTLG--------WSKEDELIVLGKLLEFSRQ-NKNP 75
           K G K    EA +    K+  + ++++         WS+EDE++VL  +++F     K+P
Sbjct: 123 KSGTKRPASEAAATTSTKRVKKDEESVKKPGGFQRLWSEEDEILVLQGMIDFKADTGKSP 182

Query: 76  NYYTSQFYMYVNKMLSVQLSENQLCYMIYCLRKQYL--DSKDDDNLDWNERVRALELSDK 128
              T+ FY ++ K +S ++S+NQ    I  LRK+Y+  + +++ +       +A ELS  
Sbjct: 183 YVDTNAFYDFLKKSISFEVSKNQFMDKIRSLRKKYIGKEGRNEPSFVKAHDKKAFELSKF 242

[Close]

BLAST of HG10003373 vs. TAIR 10
Match: AT1G11510.1 (DNA-binding storekeeper protein-related transcriptional regulator )

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-05
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 14  QKKQGMKEKYYEAPSCGELKKTLRQKDTLGWSKEDELIVLGKLLEFSRQNKNPNYYTSQF 73
           +K  G +EK        E KKT  Q+    W+++DE++VL  L++  +     N  T++ 
Sbjct: 115 KKVSGEEEKKKSGGGGEETKKTYFQR---LWTEDDEIVVLQGLIDDKKDTGVSN--TNKV 174

Query: 74  YMYVNKMLSVQLSENQLCYMIYCLRKQYLDS--KDDDNLDWN----ERVRALELSDKIWG 129
           Y  V K +S  +S+NQL   +  L+K+Y ++  K  D ++         +A ELS  +WG
Sbjct: 175 YELVKKSISFDVSKNQLMEKLRALKKKYENNLGKAKDGVEPTFVKPHDRKAFELSKLVWG 230

The following BLAST results are available for this feature:

BLAST of HG10003373 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607616.1	2.1e-45	52.79	hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022158998.1	4.9e-10	26.73	probable transcription factor At4g01260 [Momordica charantia]	[more]
XP_038877618.1	5.4e-09	28.65	STOREKEEPER protein-like [Benincasa hispida]	[more]
XP_023521141.1	2.1e-08	31.25	probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]	[more]
XP_022951915.1	3.5e-08	28.87	probable transcription factor At1g66420 [Cucurbita moschata]	[more]

BLAST of HG10003373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYA9	1.5e-06	29.27	Probable transcription factor At1g61730 OS=Arabidopsis thaliana OX=3702 GN=At1g6...	[more]
C0SUU6	7.1e-04	30.58	Probable transcription factor At1g11510 OS=Arabidopsis thaliana OX=3702 GN=At1g1...	[more]

BLAST of HG10003373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXL5	2.4e-10	26.73	probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1GK86	1.7e-08	28.87	probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I882	2.9e-08	31.07	probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A5A7UKP8	3.6e-06	27.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A7J0DBS2	1.0e-05	33.65	DNA-binding storekeeper protein-related transcriptional regulator OS=Actinidia r...	[more]

BLAST of HG10003373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61730.1	1.1e-07	29.27	DNA-binding storekeeper protein-related transcriptional regulator	[more]
AT1G11510.1	5.1e-05	30.58	DNA-binding storekeeper protein-related transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 44..127 e-value: 4.7E-11 score: 43.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003373.1	HG10003373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding