HG10003305 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003305
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TLC domain-containing protein
Location	Chr11: 19948217 .. 19948954 (-)
RNA-Seq Expression	HG10003305
Synteny	HG10003305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCCATCTGAACCCTCTTCCTTTCTTCTTCTCAATCTTCTTTACGATCTATATTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGTACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCAGTCGTGGTTTTGCCTCACCCAACACAGATCTTCAAAACACCGTCCTCGATTACAGCATCGCCTACTTTCTGATGGATCTGTTGCACTATATCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTGACTTGCCGTTACCTTGTCTCTCATGGCGCTTATGCGATTCTTGTGCTTCTCATTCTCGCAGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGGAGAGCCGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCTTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCCAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCGGCTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAGAGAAAGGAGCAGCGAATTGGGGAACAAGAAGGCCAGGTAG

mRNA sequence

ATGGAAACCCATCTGAACCCTCTTCCTTTCTTCTTCTCAATCTTCTTTACGATCTATATTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGTACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCAGTCGTGGTTTTGCCTCACCCAACACAGATCTTCAAAACACCGTCCTCGATTACAGCATCGCCTACTTTCTGATGGATCTGTTGCACTATATCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTGACTTGCCGTTACCTTGTCTCTCATGGCGCTTATGCGATTCTTGTGCTTCTCATTCTCGCAGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGGAGAGCCGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCTTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCCAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCGGCTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAGAGAAAGGAGCAGCGAATTGGGGAACAAGAAGGCCAGGTAG

Coding sequence (CDS)

ATGGAAACCCATCTGAACCCTCTTCCTTTCTTCTTCTCAATCTTCTTTACGATCTATATTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGTACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCAGTCGTGGTTTTGCCTCACCCAACACAGATCTTCAAAACACCGTCCTCGATTACAGCATCGCCTACTTTCTGATGGATCTGTTGCACTATATCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTGACTTGCCGTTACCTTGTCTCTCATGGCGCTTATGCGATTCTTGTGCTTCTCATTCTCGCAGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGGAGAGCCGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCTTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCCAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCGGCTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAGAGAAAGGAGCAGCGAATTGGGGAACAAGAAGGCCAGGTAG

Protein sequence

METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELGNKKAR

Homology

[Close]

BLAST of HG10003305 vs. NCBI nr
Match: XP_038897259.1 (TLC domain-containing protein At5g14285-like [Benincasa hispida])

HSP 1 Score: 458.0 bits (1177), Expect = 5.2e-125
Identity = 233/245 (95.10%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI AYFLLFRNWSPKIRPEAASCAISF HGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIFAYFLLFRNWSPKIRPEAASCAISFVHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
            DA RGFAS NTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  TDAGRGFASSNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFA+ VYN+LSPPFYVLYSIVRGFV
Sbjct: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFANTVYNLLSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRE+SS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYREKSSKLE 240

Query: 241 NKKAR 246
            KKAR
Sbjct: 241 KKKAR 245

[Close]

BLAST of HG10003305 vs. NCBI nr
Match: XP_008450065.1 (PREDICTED: uncharacterized protein LOC103491768 [Cucumis melo] >KAA0056248.1 TLC domain-containing protein [Cucumis melo var. makuwa] >TYK05250.1 TLC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 458.0 bits (1177), Expect = 5.2e-125
Identity = 230/245 (93.88%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPK+RPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKVRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DA RGFASPN+DLQN VLDYSIAYFLMDLLHY+IFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNVVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KK R
Sbjct: 241 KKKGR 245

[Close]

BLAST of HG10003305 vs. NCBI nr
Match: XP_004145717.1 (TLC domain-containing protein At5g14285 [Cucumis sativus] >KGN58200.1 hypothetical protein Csa_017422 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 230/242 (95.04%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIY++AYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYVIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DA RGFASPN+DLQN VLDYSIAYFLMDLLHY+IFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNLVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VSHGAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSHGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVAAAISVSILWITNLWVELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLE 240

Query: 241 NK 243
            K
Sbjct: 241 KK 242

[Close]

BLAST of HG10003305 vs. NCBI nr
Match: XP_022982707.1 (TLC domain-containing protein At5g14285-like [Cucurbita maxima])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 228/245 (93.06%), Postives = 239/245 (97.55%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPKIRPEAASCAISFAHGTPAV LAS AIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVILASKAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           ADA+RGFAS NTD QN+VLDYSIAYFLMDLLHY+IFFP+DLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  ADAARGFASSNTDFQNSVLDYSIAYFLMDLLHYLIFFPADLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQNAWTLARARRADVEFADR+YN+LSPPFY+LYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRIYNLLSPPFYMLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KKAR
Sbjct: 241 KKKAR 245

[Close]

BLAST of HG10003305 vs. NCBI nr
Match: XP_022935006.1 (TLC domain-containing protein At5g14285-like [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 229/245 (93.47%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPKIRPEAASCAISFAHGTPAV LAS AIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVILASKAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           AD +RGFAS NTD QN+VLDYSIAYFLMDLLHY+IFFP+DLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  ADVARGFASSNTDFQNSVLDYSIAYFLMDLLHYLIFFPADLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYN+LSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNLLSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KKAR
Sbjct: 241 KKKAR 245

[Close]

BLAST of HG10003305 vs. ExPASy Swiss-Prot
Match: Q8GYK7 (TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g14285 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 9.0e-80
Identity = 151/238 (63.45%), Postives = 184/238 (77.31%), Query Frame = 0


Query: 2   ETHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILA 61
           E  +  LP FFS+F TIY++AYF++FRNW P+IRPEA+SC IS  HG+PAVFLA+ A+ +
Sbjct: 7   EISIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFS 66

Query: 62  DASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYLV 121
            + R FAS NT  QNTVLD+S+AYFL DL HYI+F P+D+LFI HH+ TLFVF+TCR+LV
Sbjct: 67  SSERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLV 126

Query: 122 SHGAYAILVLLILAEVTSFCQNAWTLARARRADVE--FADRVYNILSPPFYVLYSIVRGF 181
            HGA AIL LLILAEVTS CQNAWTLA AR+ D E   A +VY++LSPPFY  YSIVRG 
Sbjct: 127 FHGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGV 186

Query: 182 VGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSS 238
           +GP F  KM  F+  GGA  VIP W+W+SW  VV  AI+VSILWI NLW+EL+ ER +
Sbjct: 187 LGPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKA 244

[Close]

BLAST of HG10003305 vs. ExPASy TrEMBL
Match: A0A5A7UMC7 (TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00610 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 230/245 (93.88%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPK+RPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKVRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DA RGFASPN+DLQN VLDYSIAYFLMDLLHY+IFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNVVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KK R
Sbjct: 241 KKKGR 245

[Close]

BLAST of HG10003305 vs. ExPASy TrEMBL
Match: A0A1S3BMT9 (uncharacterized protein LOC103491768 OS=Cucumis melo OX=3656 GN=LOC103491768 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 230/245 (93.88%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPK+RPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKVRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DA RGFASPN+DLQN VLDYSIAYFLMDLLHY+IFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNVVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KK R
Sbjct: 241 KKKGR 245

[Close]

BLAST of HG10003305 vs. ExPASy TrEMBL
Match: A0A0A0L8C3 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G589580 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.6e-125
Identity = 230/242 (95.04%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIY++AYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYVIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DA RGFASPN+DLQN VLDYSIAYFLMDLLHY+IFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNLVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VSHGAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSHGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVAAAISVSILWITNLWVELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLE 240

Query: 241 NK 243
            K
Sbjct: 241 KK 242

[Close]

BLAST of HG10003305 vs. ExPASy TrEMBL
Match: A0A6J1IXA9 (TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC111481492 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.7e-124
Identity = 228/245 (93.06%), Postives = 239/245 (97.55%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPKIRPEAASCAISFAHGTPAV LAS AIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVILASKAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           ADA+RGFAS NTD QN+VLDYSIAYFLMDLLHY+IFFP+DLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  ADAARGFASSNTDFQNSVLDYSIAYFLMDLLHYLIFFPADLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQNAWTLARARRADVEFADR+YN+LSPPFY+LYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRIYNLLSPPFYMLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KKAR
Sbjct: 241 KKKAR 245

[Close]

BLAST of HG10003305 vs. ExPASy TrEMBL
Match: A0A6J1F3C9 (TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LOC111441998 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.7e-124
Identity = 229/245 (93.47%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   METHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYI+AYFLLFRNWSPKIRPEAASCAISFAHGTPAV LAS AIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVILASKAIL 60

Query: 61  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           AD +RGFAS NTD QN+VLDYSIAYFLMDLLHY+IFFP+DLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  ADVARGFASSNTDFQNSVLDYSIAYFLMDLLHYLIFFPADLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYN+LSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNLLSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSELG 240
           GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLW+ELYRERSS+L 
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 NKKAR 246
            KKAR
Sbjct: 241 KKKAR 245

[Close]

BLAST of HG10003305 vs. TAIR 10
Match: AT5G14280.1 (DNA-binding storekeeper protein-related )

HSP 1 Score: 298.1 bits (762), Expect = 6.4e-81
Identity = 151/238 (63.45%), Postives = 184/238 (77.31%), Query Frame = 0


Query: 2   ETHLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILA 61
           E  +  LP FFS+F TIY++AYF++FRNW P+IRPEA+SC IS  HG+PAVFLA+ A+ +
Sbjct: 325 EISIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFS 384

Query: 62  DASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYLV 121
            + R FAS NT  QNTVLD+S+AYFL DL HYI+F P+D+LFI HH+ TLFVF+TCR+LV
Sbjct: 385 SSERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLV 444

Query: 122 SHGAYAILVLLILAEVTSFCQNAWTLARARRADVE--FADRVYNILSPPFYVLYSIVRGF 181
            HGA AIL LLILAEVTS CQNAWTLA AR+ D E   A +VY++LSPPFY  YSIVRG 
Sbjct: 445 FHGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGV 504

Query: 182 VGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSS 238
           +GP F  KM  F+  GGA  VIP W+W+SW  VV  AI+VSILWI NLW+EL+ ER +
Sbjct: 505 LGPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKA 562

[Close]

BLAST of HG10003305 vs. TAIR 10
Match: AT3G27270.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 244.6 bits (623), Expect = 8.4e-65
Identity = 125/244 (51.23%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 3   THLNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILAD 62
           T+   LP FFSIF  +Y++ Y  +F+ W+P+ RP A+SC IS  HG  AV LA+ A+L+D
Sbjct: 5   TYSKDLPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSD 64

Query: 63  ASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPS----DLLFIAHHLVTLFVFVTCR 122
            +RGF+S NT  QN++LD+S AYFL DL+H  + FPS    D LF AHHL  LFVF+TCR
Sbjct: 65  PNRGFSSVNTQSQNSILDFSSAYFLADLVHLAV-FPSPAGGDSLFAAHHLAVLFVFLTCR 124

Query: 123 YLVSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRG 182
           Y+V+HGA A+L LL++AE TS CQN WTLA AR  D   A  ++  ++ PFY  YS+ R 
Sbjct: 125 YMVAHGACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRC 184

Query: 183 FVGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSSE 242
            + P  + KM  F+ +GGA+ VIP+WVW+SW  V+  A++VSILWI NLWV  ++ER S+
Sbjct: 185 VLAPLLIVKMTWFYVSGGADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQERYSK 244

[Close]

BLAST of HG10003305 vs. TAIR 10
Match: AT3G25950.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62
Identity = 120/237 (50.63%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 5   LNPLPFFFSIFFTIYIVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL---- 64
           L   P F  +F  +Y + YFL+FR W        ASC +S  HGTPAV +AS A+L    
Sbjct: 12  LATFPSFLLLFLAVYTIGYFLVFRTWKQSSH-LGASCLMSLFHGTPAVIMASHALLTTPR 71

Query: 65  ADASRGFASPNTDLQNTVLDYSIAYFLMDLLHYIIFFPSDLLFIAHHLVTLFVFVTCRYL 124
           AD    FASPNT +++ VLD+S+AYF +DLLHY+IF P+D +FI HH+ TL+VF TCR+ 
Sbjct: 72  ADV-HSFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFA 131

Query: 125 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 184
           V HGA+ +L+LLILAE TS CQN WT+   R+ DV  A RV  +LSPPFY+ Y++VRG  
Sbjct: 132 VGHGAHGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLA 191

Query: 185 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAAAISVSILWITNLWVELYRERSS 238
           GP  LY M  F+ +G A+ V+P+W W+SW+ V+  AI VSILW+   W++ +RE +S
Sbjct: 192 GPVVLYDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNS 246

The following BLAST results are available for this feature:

BLAST of HG10003305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897259.1	5.2e-125	95.10	TLC domain-containing protein At5g14285-like [Benincasa hispida]	[more]
XP_008450065.1	5.2e-125	93.88	PREDICTED: uncharacterized protein LOC103491768 [Cucumis melo] >KAA0056248.1 TLC...	[more]
XP_004145717.1	1.1e-124	95.04	TLC domain-containing protein At5g14285 [Cucumis sativus] >KGN58200.1 hypothetic...	[more]
XP_022982707.1	9.7e-124	93.06	TLC domain-containing protein At5g14285-like [Cucurbita maxima]	[more]
XP_022935006.1	9.7e-124	93.47	TLC domain-containing protein At5g14285-like [Cucurbita moschata]	[more]

BLAST of HG10003305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYK7	9.0e-80	63.45	TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g1...	[more]

BLAST of HG10003305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMC7	2.5e-125	93.88	TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BMT9	2.5e-125	93.88	uncharacterized protein LOC103491768 OS=Cucumis melo OX=3656 GN=LOC103491768 PE=...	[more]
A0A0A0L8C3	5.6e-125	95.04	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G589580 PE=4 SV...	[more]
A0A6J1IXA9	4.7e-124	93.06	TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1F3C9	4.7e-124	93.47	TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of HG10003305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14280.1	6.4e-81	63.45	DNA-binding storekeeper protein-related	[more]
AT3G27270.1	8.4e-65	51.23	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT3G25950.1	1.0e-62	50.63	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 33..236 e-value: 4.6E-29 score: 112.5
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 33..236 score: 9.680886
IPR040327	TLC domain-containing protein At5g14285-like	PANTHER	PTHR31766	GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2	coord: 4..243
None	No IPR available	PANTHER	PTHR31766:SF10	TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN CONTAINING PROTEIN-RELATED	coord: 4..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003305.1	HG10003305.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane