HG10003018 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003018
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
LocationChr11: 16405633 .. 16406382 (+)
RNA-Seq ExpressionHG10003018
SyntenyHG10003018
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCCCTAGAGTTGTGTGCCTTGGCTTTCTTCTCTTTATAGGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

mRNA sequence

ATGGCTATCCCTAGAGTTGTGTGCCTTGGCTTTCTTCTCTTTATAGGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGGCTATCCCTAGAGTTGTGTGCCTTGGCTTTCTTCTCTTTATAGGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Protein sequence

MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAVKNSISKEN
Homology
BLAST of HG10003018 vs. NCBI nr
Match: XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-78
Identity = 192/266 (72.18%), Postives = 207/266 (77.82%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAIPRV+C G LLF+ LGLAS AR LLDYD  T HY YDRP+PRVGYDPSHRD SYDN+Y
Sbjct: 1   MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYG 120
           GG S+ G+GIGDSALGGSGRYEGGG  + R           Y  GNDDRGVGYGNGGGYG
Sbjct: 61  GGGSNRGYGIGDSALGGSGRYEGGGEHNPR-----------YRDGNDDRGVGYGNGGGYG 120

Query: 121 SVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGD 180
            VGGHGDGYGSNGGGG   RYGPS GGSGYG+GNGYDQ RD+GVGYGS+GG   SN YGD
Sbjct: 121 GVGGHGDGYGSNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD 180

Query: 181 SHGNGYGARDNGHGDSRGYGARDN----------GYGVGGHGG----GYDNNGGVHGGQY 240
           S   GYGARDNG+GDSRGYGARDN          GYGVGGHGG    G   NGGVHGG+Y
Sbjct: 181 S--RGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEY 240

Query: 241 ENSKGSGEEGGYDGGYAVKNSISKEN 250
           +NSKGSGEEGGYDGGYA+KNSIS +N
Sbjct: 241 DNSKGSGEEGGYDGGYALKNSISNKN 251

BLAST of HG10003018 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 7.9e-73
Identity = 180/271 (66.42%), Postives = 197/271 (72.69%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAIP+V+C+GFLLF+GLGLAS ARTLLDYD  T  Y YD PTPRVGYDPSHRD+SYD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGG----------------------RNDDP 120
            GSSS G+G+GDSALGGSGRYEGGGGRDS YGG                      RNDD 
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 121 GVGYGGGNDDRGVGYGNGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQ 180
           G GYGG NDDRGVGYGNGGGYGSVGGHGDGYG+NGGG  GDRYGPS GGSGYGS      
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGS------ 180

Query: 181 GRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGV 240
                   G +G  NGY D H  G GARDN +GDS G+  RD+GYG GG   G   NGGV
Sbjct: 181 --------GGKGSGNGY-DDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGV 240

Query: 241 HGGQYENSKGSGEEGGYDGGYAVKNSISKEN 250
           HGG+++NSKGSGEEGG DGGYA KNSIS +N
Sbjct: 241 HGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 256

BLAST of HG10003018 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 176/249 (70.68%), Postives = 188/249 (75.50%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +CL FLLF+GLGLAS  RTLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYG 120
           GGSSS GHGIGDSALGGSG YEGGG RD            GYG  ND+RGVGYGNGGGYG
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRD-----------YGYGDRNDNRGVGYGNGGGYG 120

Query: 121 SVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHG 180
            VGGHGDGYG+NGGGG GDRYGPS GGSGYGS              G +G  NGY D H 
Sbjct: 121 GVGGHGDGYGNNGGGGYGDRYGPSLGGSGYGS--------------GGKGSDNGYDDRHS 180

Query: 181 NGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYA 240
           +GYG RDNG+GDS G+  RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYA
Sbjct: 181 HGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYA 223

Query: 241 VKNSISKEN 250
           VKNSISK N
Sbjct: 241 VKNSISKGN 223

BLAST of HG10003018 vs. NCBI nr
Match: XP_038903421.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-68
Identity = 180/261 (68.97%), Postives = 196/261 (75.10%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MA  RV+C GFL+F+  GLAS ARTLLDYD  T HY YDRPTPRVGYDPSHRD SYDNAY
Sbjct: 12  MATTRVLCFGFLVFVCFGLASAARTLLDYDPRTRHYDYDRPTPRVGYDPSHRDGSYDNAY 71

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYG 120
           G SS  G+GIGDSALGGSG+YEG  G DS           GYGG NDDRGVGYGNGGGYG
Sbjct: 72  GRSSGRGYGIGDSALGGSGQYEGDRGHDS-----------GYGGRNDDRGVGYGNGGGYG 131

Query: 121 SVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGD 180
            + GHG+GYG NGGG   +R GPS GGSGYGSG+GYDQGRD+GVGYGSRGG   SNGYGD
Sbjct: 132 GIEGHGNGYGRNGGGSYENRDGPSLGGSGYGSGDGYDQGRDHGVGYGSRGGADSSNGYGD 191

Query: 181 SHG-----NGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDN----NGGVHGGQYENSKG 240
           S G     NGYGA DN +G   G G    GYGVGGHGGG  +    NGGVHGG+Y+N+KG
Sbjct: 192 SRGYQARDNGYGAHDNVYGSGGGAG---GGYGVGGHGGGIGSGGYGNGGVHGGEYDNNKG 251

Query: 241 SGEEGGYDGGYAVKNSISKEN 250
           SG EGGYDGGYAVK+SIS  N
Sbjct: 252 SG-EGGYDGGYAVKSSISNTN 257

BLAST of HG10003018 vs. NCBI nr
Match: XP_031738632.1 (glycine-rich cell wall structural protein 1.8-like [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-68
Identity = 181/315 (57.46%), Postives = 198/315 (62.86%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAIP+V+C+GFLLF+GLGLAS ARTLLDYD  T  Y YD PTPRVGYDPSHRD+SYD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGV-------------------- 120
            GSSS G+G+GDSALGGSGRYEGGGGRDS YGGRNDD GV                    
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDHGVGYEGRNDGRGAGYGSRNDDR 120

Query: 121 ----------------------------------------------GYGGGNDDRGVGYG 180
                                                         GYGG NDDRGVGYG
Sbjct: 121 SAGYGGRNDDRGAGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDHGAGYGGRNDDRGVGYG 180

Query: 181 NGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNG 240
           NGGGYGSVGGHGDGYG+NGGG  GDRYGPS GGSGYGS              G +G  NG
Sbjct: 181 NGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGS--------------GGKGSGNG 240

Query: 241 YGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGG 250
           Y D H  G GARDN +GDS G+  RD+GYG GG   G   NGGVHGG+++NSKGSGEEGG
Sbjct: 241 Y-DDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGG 300

BLAST of HG10003018 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06
Identity = 99/247 (40.08%), Postives = 114/247 (46.15%), Query Frame = 0

Query: 9   LGFLLF-IGLGLASTARTLL---DYDSHTPHYGYDRPTPR-----VGYDPSHRDESYDNA 68
           L FL F IGLGL S  R LL   + ++    YG +          +G  P        + 
Sbjct: 7   LFFLCFLIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGG-----GSG 66

Query: 69  YGGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGN-DDRGVGYGNGGG 128
           YGG S  G G G    G  G   GGG      GG    PG GYGGG+ +  G GYG G  
Sbjct: 67  YGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEA 126

Query: 129 YGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGS------ 188
            G  GG G G G  GGGG G   G   GG G G+G GY  G   G G G  GG+      
Sbjct: 127 GGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGG 186

Query: 189 -NGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGE 239
            +G G +HG GYGA   G G+  G GA   G+G GG GGG    GG  GG Y  + G G 
Sbjct: 187 GSGEGGAHGGGYGA-GGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYAAASGYGH 246

BLAST of HG10003018 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 101/266 (37.97%), Postives = 116/266 (43.61%), Query Frame = 0

Query: 1   MAIPRVVCLGFL-LFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MA  +V+    L +F+  G+ S ARTLL  +        DR    VG        +    
Sbjct: 1   MATSKVLLSNVLFVFVCFGICSAARTLLTLE--------DRVNLHVG--------TVVGG 60

Query: 61  YGGSSSTGHGIGDSA--LGGSGRYEGGGGRD-------SRYGGRNDDPGVGYGGGNDDRG 120
           YGG   +G G G +A  LGG G  EG GG +       +  GG     G G GGG    G
Sbjct: 61  YGGGGGSGGGGGGAAVELGGGGYGEGAGGGEGAGAGYGAAGGGHGGGGGNGGGGGGGADG 120

Query: 121 VGYGNGG------GYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGY----GSGNGYDQGR 180
            GYG G       GYG  G +G GYG  GG G G   G    GSGY    GSG G   G 
Sbjct: 121 GGYGGGAGKGGGEGYGGGGANGGGYGGGGGSGGGGGGGAGGAGSGYGGGEGSGAGGGYGG 180

Query: 181 DNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSRGYG-------ARDNGYGVGGHGGGYD 240
            NG G G  GG  G G    +G GA   G G  +G G       A   G G GG GGG  
Sbjct: 181 ANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGGGRGSGGGGGGGY 240

BLAST of HG10003018 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.6e-72
Identity = 176/249 (70.68%), Postives = 188/249 (75.50%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +CL FLLF+GLGLAS  RTLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYG 120
           GGSSS GHGIGDSALGGSG YEGGG RD            GYG  ND+RGVGYGNGGGYG
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRD-----------YGYGDRNDNRGVGYGNGGGYG 120

Query: 121 SVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHG 180
            VGGHGDGYG+NGGGG GDRYGPS GGSGYGS              G +G  NGY D H 
Sbjct: 121 GVGGHGDGYGNNGGGGYGDRYGPSLGGSGYGS--------------GGKGSDNGYDDRHS 180

Query: 181 NGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYA 240
           +GYG RDNG+GDS G+  RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYA
Sbjct: 181 HGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYA 223

Query: 241 VKNSISKEN 250
           VKNSISK N
Sbjct: 241 VKNSISKGN 223

BLAST of HG10003018 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.6e-72
Identity = 176/249 (70.68%), Postives = 188/249 (75.50%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +CL FLLF+GLGLAS  RTLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYG 120
           GGSSS GHGIGDSALGGSG YEGGG RD            GYG  ND+RGVGYGNGGGYG
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRD-----------YGYGDRNDNRGVGYGNGGGYG 120

Query: 121 SVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHG 180
            VGGHGDGYG+NGGGG GDRYGPS GGSGYGS              G +G  NGY D H 
Sbjct: 121 GVGGHGDGYGNNGGGGYGDRYGPSLGGSGYGS--------------GGKGSDNGYDDRHS 180

Query: 181 NGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYA 240
           +GYG RDNG+GDS G+  RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYA
Sbjct: 181 HGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYA 223

Query: 241 VKNSISKEN 250
           VKNSISK N
Sbjct: 241 VKNSISKGN 223

BLAST of HG10003018 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.4e-67
Identity = 178/308 (57.79%), Postives = 193/308 (62.66%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +C+ FLLF+ LGLAS ARTLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGV-------------------- 120
           GGSS+ G+G+GDSALGGSGRYEGGGG D  YGGRNDD GV                    
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ---------------------------------------GYGGGNDDRGVGYGNGGGYGS 180
                                                  GYGG NDDRGVGYGNGGGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGN 240
           VGGHGDGYG+N GGG GDRY PS GGSGYG+              G +G  NGY D H  
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGN--------------GGKGSGNGY-DDHSR 240

Query: 241 GYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAV 250
           GYG  DNG+GDS G+G RD+GYG GG   G   NGGVHGG+Y+NSKGSGE GG DGGYAV
Sbjct: 241 GYGGHDNGYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAV 293

BLAST of HG10003018 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.4e-67
Identity = 178/308 (57.79%), Postives = 193/308 (62.66%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +C+ FLLF+ LGLAS ARTLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGV-------------------- 120
           GGSS+ G+G+GDSALGGSGRYEGGGG D  YGGRNDD GV                    
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ---------------------------------------GYGGGNDDRGVGYGNGGGYGS 180
                                                  GYGG NDDRGVGYGNGGGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGN 240
           VGGHGDGYG+N GGG GDRY PS GGSGYG+              G +G  NGY D H  
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGN--------------GGKGSGNGY-DDHSR 240

Query: 241 GYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAV 250
           GYG  DNG+GDS G+G RD+GYG GG   G   NGGVHGG+Y+NSKGSGE GG DGGYAV
Sbjct: 241 GYGGHDNGYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAV 293

BLAST of HG10003018 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 9.5e-64
Identity = 169/250 (67.60%), Postives = 181/250 (72.40%), Query Frame = 0

Query: 1   MAIPRVVCLGFLLFIGLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAY 60
           MAI R +CL FLLF+ LGLAS  RTLLDYD  T  YGYDRP+PRVGYDP H DESYD AY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGN-GGGY 120
           GGSSS GHGIGDSALGGSG YEGGG  D            GYG  ++DRGVGYGN GGGY
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHD-----------YGYGDRHNDRGVGYGNYGGGY 120

Query: 121 GSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSH 180
           G VGGHGDGYG+NGGG  GDRYGPS GGSGYGS              G +G  NGY D H
Sbjct: 121 GGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGS--------------GGKGSGNGY-DDH 180

Query: 181 GNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGY 240
             G GARDN +GDS G+G RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGY
Sbjct: 181 SRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGY 223

Query: 241 AVKNSISKEN 250
           AVKNSISK N
Sbjct: 241 AVKNSISKGN 223

BLAST of HG10003018 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07
Identity = 99/247 (40.08%), Postives = 114/247 (46.15%), Query Frame = 0

Query: 9   LGFLLF-IGLGLASTARTLL---DYDSHTPHYGYDRPTPR-----VGYDPSHRDESYDNA 68
           L FL F IGLGL S  R LL   + ++    YG +          +G  P        + 
Sbjct: 7   LFFLCFLIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGG-----GSG 66

Query: 69  YGGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGN-DDRGVGYGNGGG 128
           YGG S  G G G    G  G   GGG      GG    PG GYGGG+ +  G GYG G  
Sbjct: 67  YGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEA 126

Query: 129 YGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGS------ 188
            G  GG G G G  GGGG G   G   GG G G+G GY  G   G G G  GG+      
Sbjct: 127 GGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGG 186

Query: 189 -NGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGE 239
            +G G +HG GYGA   G G+  G GA   G+G GG GGG    GG  GG Y  + G G 
Sbjct: 187 GSGEGGAHGGGYGA-GGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYAAASGYGH 246

BLAST of HG10003018 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.9e-04
Identity = 92/241 (38.17%), Postives = 107/241 (44.40%), Query Frame = 0

Query: 11  FLLFIGLGLA-STARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHG 70
           F L +G+ +  +T+R LL+Y   +   G+       G             YGG S  G G
Sbjct: 11  FFLILGVSICYATSRNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAG 70

Query: 71  IG-----DSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYGSVGG 130
            G       A GG   + GGGG  +  GG     G G GGG      G+  GGG GS GG
Sbjct: 71  GGYGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGG 130

Query: 131 HGDGYGSNG----GGGNGDRYGPSFGGSGYGSG-NGYDQGRDNGVGYGSRGGSNGYGDSH 190
            G  YG+ G    G GNG   G   G SGYG G  G   G   G G GS GG++G G  +
Sbjct: 131 GGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHG-GSGY 190

Query: 191 GNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGY 241
           G G G    G G   G G    G G G  GGG    GG HGG Y    G GE GGY GG 
Sbjct: 191 GGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGGGAHGGGY--GSGGGEGGGYGGGA 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903641.14.8e-7872.18glycine-rich cell wall structural protein 2-like [Benincasa hispida][more]
KAE8650023.17.9e-7366.42hypothetical protein Csa_011563 [Cucumis sativus][more]
XP_008449165.11.1e-7170.68PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA... [more]
XP_038903421.12.6e-6868.97glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_031738632.13.5e-6857.46glycine-rich cell wall structural protein 1.8-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9SIH25.1e-0640.08Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1[more]
P104951.6e-0437.97Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
Match NameE-valueIdentityDescription
A0A5A7UHU25.6e-7270.68Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BMC45.6e-7270.68glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7UEU32.4e-6757.79Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BM262.4e-6757.79glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A0A0L1V39.5e-6467.60Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G36120.13.6e-0740.08Glycine-rich protein family [more]
AT5G46730.14.9e-0438.17glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 112..127
score: 43.75
coord: 166..184
score: 30.26
coord: 141..151
score: 40.91
coord: 4..20
score: 35.29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003018.1HG10003018.1mRNA