HG10002999 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002999
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	binding partner of ACD11 1-like
Location	Chr11: 16244550 .. 16246972 (-)
RNA-Seq Expression	HG10002999
Synteny	HG10002999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTTAGTACTTTGTGAATTTCCCTCTCTTTTTCATTGTGTTTAAAGATTGGGATTGTGGGAGTTGGCAGATGGTTAGGGCAAAATTTCATTGGGTTAGATTTGGAGCGGTATTCTGTAGTTTTTCATTGGGGTTATGGCGTATTAGTGCAATGTGCGGCGAAGGGATTAGATCTCTTGTGGTTTACTTTCCCGTTTGACTTTCTCATTTGAGGGTTTTGTGTTATGTCGTGATTTTTCCCAATCAGTGTATCAAGAATCGAGATTAATGTTTAAGCAAATGGGTCCATTTCTATGGTTTGATTGATGAAATGTACTGTGAGTTTGTGCCACGTTCGATCCTCCTTCTGTACTGGAGCTGCATATAAACATACATTCGAAACTAGAACCAGGAGCGTCAAGCCTGTAACTCATAGTTCGAACTGTATAATCTTCGCGCCGTTGGATTATAATTGTTGCTTGGCTTGTTGATTTCCATCGTTTCTTCTCTGCATCCATGACATTTTGCCTTCTGTTTTTCATTTCTTTTCTGGCCATAATTGATTTTTTTTACTCTCTTTCTGCCTTATGGTTATCACGGTTCAGTTGTAGCAATGAATTTATCCACCTTTCTTGGAGATAGTGAGAGATTTCTTGATCTTGTCTGAAGTGCTTGTTTTGTTCTGTATGCAGATTAAGACTGTCAAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGAATATCTTGAAATGCAGAGGTTCGTGTACCGATTTTAATTTCATTTTATGATATATATTCTCTTCGTTCTATTTTATGCAAACACTAGGTTTCTGTTCTTGTGCAGTGAAAGTGAGCGGTCTCAAATTGCTTATGTAACCTTTAAGGACACGCAAGGAGCAGAGACTGCCGTTCTTTTGTCCGTAAGTTCACTGTGTAGACAATGTCTCTAGTTCGTAGTAATTATAAGTTTTATACCCATTGACATTTAAGATTTAACTCTAAAAGATTCCATTATTAGTGGAGCTGTGTGTCGAAGTTCAAATATGGTTGGCAATATGGTTGCTCACTGTTAAAAGGTGTTCTTGGCTGTTATTAGTGGTCTGATCACATAGCCTTGTCCTTAAGGGATAAACTGATGCTTTAACCTCACTACTAGGACCATAACATCTTTTCTTCTATTCTCTTTAGTTATACCTTACATCATTTCCACCTTCCTAAAACTGCATTGGTTTCAACCGATAAATGAATGATCAGAATCATTGTGCCAGCCCCAATATCTGTATTAGGTGAGTACTGTTGCCATTTTACAATCAAATGATGTGTGATCTGAGTGAGCACTTTGCCCCTTAAGGAGTTAAATGGTGTAAGGAACATGACCTTTGTTGCAAACAGCAGGAGGTCAAATTTTGGTTTGATTGCTCTTCTATTATTTGAGCGTATATGATATCTTAGCTGGAAGTATGTTCTGCATCAATCAGTTTACCTTTTTCTCTTTCCTTGAGAAGTATTTTATATGAATTTTTTTTGTACGTTTATAATCTGTTATCCTTATAACACATTAACTAATGAGAACGAGCAATACAAATCACCTGAGCTAGTTAGATTAATGGAGCTCAACTTCTTATCAGGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCTGAAGCTACCGCACCACCCCCTGTAAGATTCTTGGAAGTTTTTTTTTTTGGCCTGCTATGGTGAGCCTGTATGCCACTTTTTACGTTGCTTCTTAGTTGACCAGCTCATTGCCTTGATTGTTGTAGGCCCCTGGAACTAAAGCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTGGTTAGTGGCATGCTAGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCGGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCTTCAGCTAAAGTTGCTACATTGGATAAAAAAATTGGATTCACTGAGAAAATTAGTGCTGGTACATCGTTGATGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCGGAGAAGACTAAATCAGCATTTGCAGTTGCGGAAGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTACTGATGCTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCGGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTTTCAGAATCCCCAAAAGCAGCATCAGCGCCCCCTGAGGAGCCTCAACAACGTCCCAAGCCCGAACCAGCTCAAGGTCTGATCCTCTGA

mRNA sequence

ATGTCGATTAAGACTGTCAAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGAATATCTTGAAATGCAGAGTGAAAGTGAGCGGTCTCAAATTGCTTATGTAACCTTTAAGGACACGCAAGGAGCAGAGACTGCCGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAAAGCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTGGTTAGTGGCATGCTAGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCGGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCTTCAGCTAAAGTTGCTACATTGGATAAAAAAATTGGATTCACTGAGAAAATTAGTGCTGGTACATCGTTGATGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCGGAGAAGACTAAATCAGCATTTGCAGTTGCGGAAGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTACTGATGCTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCGGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTTTCAGAATCCCCAAAAGCAGCATCAGCGCCCCCTGAGGAGCCTCAACAACGTCCCAAGCCCGAACCAGCTCAAGGTCTGATCCTCTGA

Coding sequence (CDS)

ATGTCGATTAAGACTGTCAAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGAATATCTTGAAATGCAGAGTGAAAGTGAGCGGTCTCAAATTGCTTATGTAACCTTTAAGGACACGCAAGGAGCAGAGACTGCCGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAAAGCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTGGTTAGTGGCATGCTAGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCGGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCTTCAGCTAAAGTTGCTACATTGGATAAAAAAATTGGATTCACTGAGAAAATTAGTGCTGGTACATCGTTGATGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCGGAGAAGACTAAATCAGCATTTGCAGTTGCGGAAGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTACTGATGCTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCGGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTTTCAGAATCCCCAAAAGCAGCATCAGCGCCCCCTGAGGAGCCTCAACAACGTCCCAAGCCCGAACCAGCTCAAGGTCTGATCCTCTGA

Protein sequence

MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

Homology

[Close]

BLAST of HG10002999 vs. NCBI nr
Match: XP_038906357.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 515.4 bits (1326), Expect = 3.2e-142
Identity = 281/284 (98.94%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT L+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV DAFNKVAKAAGEVGQKTKEKVVVSE
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. NCBI nr
Match: XP_038906358.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 513.8 bits (1322), Expect = 9.2e-142
Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT L+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV DAFNKVAKAAGEVGQKTKEKVVVSE
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. NCBI nr
Match: XP_008448657.1 (PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 275/284 (96.83%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. NCBI nr
Match: XP_008448658.1 (PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 3.3e-139
Identity = 274/284 (96.48%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. NCBI nr
Match: KAA0053025.1 (binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa] >TYK11480.1 binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 505.4 bits (1300), Expect = 3.3e-139
Identity = 274/284 (96.48%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 92  MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 151

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 152 LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 211

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 212 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 271

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 272 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 331

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 332 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 375

[Close]

BLAST of HG10002999 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-70
Identity = 154/264 (58.33%), Postives = 203/264 (76.89%), Query Frame = 0


Query: 3   IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLS 62
           +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AESAFRKAEDVVSGMLAKGFIL 122
           GA+I D SV I L P+Y       +PP AP  +   + AES  +KAEDVVS MLAKGFIL
Sbjct: 65  GASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKGFIL 124

Query: 123 GKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSE 182
           GKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E
Sbjct: 125 GKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTE 184

Query: 183 KTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEE 242
           +TKS +A AE+ VS+AGSA+MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   + 
Sbjct: 185 RTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQP 244

Query: 243 EQ----KKKTVEDFAKVHLSESPK 262
            Q    +++  E ++ +H SE  K
Sbjct: 245 SQPAQSQQQLPEGYSPIHSSEYSK 258

[Close]

BLAST of HG10002999 vs. ExPASy TrEMBL
Match: A0A1S3BK81 (binding partner of ACD11 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490760 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.4e-140
Identity = 275/284 (96.83%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. ExPASy TrEMBL
Match: A0A5A7UH68 (Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001410 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 274/284 (96.48%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 92  MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 151

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 152 LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 211

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 212 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 271

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 272 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 331

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 332 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 375

[Close]

BLAST of HG10002999 vs. ExPASy TrEMBL
Match: A0A1S3BK74 (binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 274/284 (96.48%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. ExPASy TrEMBL
Match: A0A0A0L545 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.0e-138
Identity = 272/284 (95.77%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MSIKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVL
Sbjct: 1   MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTSL+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV D FN+VAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 284

[Close]

BLAST of HG10002999 vs. ExPASy TrEMBL
Match: A0A6J1CV14 (binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014836 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.1e-132
Identity = 264/284 (92.96%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MSIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120
           LSGATIVDLSVNITLCPDYELPPEATAPP A GT APGAAESAF+KAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAAESAFQKAEDVVSGMLAKGFI 120

Query: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVS 180
           LGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGT L+SDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSE 240
           EKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV DAFNKVAKAAGEVGQKTKEK V SE
Sbjct: 181 EKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASE 240

Query: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL 285
           EEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Sbjct: 241 EEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL 283

[Close]

BLAST of HG10002999 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-96
Identity = 193/273 (70.70%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M++ TVKVSNVSLGA++RD+KEFFSFSGDI YLE QSE+ER+++AYVTFKD QGAETAVL
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAP-PPAPGTKAPGAAESAFRKAEDVVSGMLAKGF 120
           LSGATIVD SV +++ PDY+L PEA A   P    K+P A +S  RKAEDVVS MLAKGF
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120

Query: 121 ILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQV 180
           ILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+KI+ GT ++ +KVREVDQK+QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180

Query: 181 SEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVS 240
           SEKTKSA A AE+ VSNAGSAIMKNRYV++G +WVT AFNKVAKAA EVGQK KEKV ++
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240

Query: 241 EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQ 273
           EEE K+K V++FA+VHLSESPKAAS+  E  ++
Sbjct: 241 EEEDKRKVVDEFARVHLSESPKAASSTQEAERE 273

[Close]

BLAST of HG10002999 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 321.6 bits (823), Expect = 6.2e-88
Identity = 182/286 (63.64%), Postives = 232/286 (81.12%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           MS+ TVKVSNVSL A+ERD+KEFFSFSGDI YLE QSE++ S++AYVTFKD QGAETAVL
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAP----PPAPGTKAPGAAE-SAFRKAEDVVSGML 120
           L+G+TIVD SV +T+ PDY+LPP+A A       +  + +P   + S FRKAEDVVSGM+
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120

Query: 121 AKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQ 180
           +KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEKI+ GT+++S+KV+EVDQ
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180

Query: 181 KFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEK 240
           KFQV+EKTKSA A AE+ VSNAGSAIMKNRYV++G +WVT AFN+V+KAA EVGQK KEK
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240

Query: 241 VVVS--EEEQKKKTVEDFAKVHLSESPKAASAPPEE---PQQRPKP 277
           V ++  EEE+KKK V++ A VHL+ESPKA     ++   P+ + +P
Sbjct: 241 VGLAEEEEEEKKKVVDEVAIVHLTESPKALDQSEQDSKLPESKSQP 286

[Close]

BLAST of HG10002999 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-73
Identity = 154/264 (58.33%), Postives = 203/264 (76.89%), Query Frame = 0


Query: 3   IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLS 62
           +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AESAFRKAEDVVSGMLAKGFIL 122
           GA+I D SV I L P+Y       +PP AP  +   + AES  +KAEDVVS MLAKGFIL
Sbjct: 65  GASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKGFIL 124

Query: 123 GKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSE 182
           GKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E
Sbjct: 125 GKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTE 184

Query: 183 KTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEE 242
           +TKS +A AE+ VS+AGSA+MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   + 
Sbjct: 185 RTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQP 244

Query: 243 EQ----KKKTVEDFAKVHLSESPK 262
            Q    +++  E ++ +H SE  K
Sbjct: 245 SQPAQSQQQLPEGYSPIHSSEYSK 259

[Close]

BLAST of HG10002999 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-72
Identity = 155/266 (58.27%), Postives = 205/266 (77.07%), Query Frame = 0


Query: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60
           M++++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVL
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVL 60

Query: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AESAFRKAEDVVSGMLAKGF 120
           LSGA+I D SV I L P+Y       +PP AP  +   + AES  +KAEDVVS MLAKGF
Sbjct: 61  LSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKGF 120

Query: 121 ILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQV 180
           ILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV
Sbjct: 121 ILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQV 180

Query: 181 SEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVS 240
           +E+TKS +A AE+ VS+AGSA+MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   
Sbjct: 181 TERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 240

Query: 241 EEEQ----KKKTVEDFAKVHLSESPK 262
           +  Q    +++  E ++ +H SE  K
Sbjct: 241 QPSQPAQSQQQLPEGYSPIHSSEYSK 256

[Close]

BLAST of HG10002999 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-71
Identity = 154/264 (58.33%), Postives = 203/264 (76.89%), Query Frame = 0


Query: 3   IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLS 62
           +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AESAFRKAEDVVSGMLAKGFIL 122
           GA+I D SV I L P+Y       +PP AP  +   + AES  +KAEDVVS MLAKGFIL
Sbjct: 65  GASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKGFIL 124

Query: 123 GKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSE 182
           GKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E
Sbjct: 125 GKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTE 184

Query: 183 KTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEE 242
           +TKS +A AE+ VS+AGSA+MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   + 
Sbjct: 185 RTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQP 244

Query: 243 EQ----KKKTVEDFAKVHLSESPK 262
            Q    +++  E ++ +H SE  K
Sbjct: 245 SQPAQSQQQLPEGYSPIHSSEYSK 258

The following BLAST results are available for this feature:

BLAST of HG10002999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906357.1	3.2e-142	98.94	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_038906358.1	9.2e-142	98.59	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_008448657.1	1.1e-139	96.83	PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]	[more]
XP_008448658.1	3.3e-139	96.48	PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]	[more]
KAA0053025.1	3.3e-139	96.48	binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa] >TYK11480.1 bin...	[more]

BLAST of HG10002999 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.6e-70	58.33	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of HG10002999 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BK81	5.4e-140	96.83	binding partner of ACD11 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490760 PE...	[more]
A0A5A7UH68	1.6e-139	96.48	Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BK74	1.6e-139	96.48	binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE...	[more]
A0A0A0L545	1.0e-138	95.77	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV...	[more]
A0A6J1CV14	7.1e-132	92.96	binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of HG10002999 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	1.3e-96	70.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	6.2e-88	63.64	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	9.7e-73	58.33	binding partner of acd11 1	[more]
AT5G16840.3	4.8e-72	58.27	binding partner of acd11 1	[more]
AT5G16840.1	1.8e-71	58.33	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 3.3E-6 score: 36.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 7..66 e-value: 1.8E-6 score: 27.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 10.462521
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..74 e-value: 6.3E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..256
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..264
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 1..264
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002999.1	HG10002999.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding