Homology
BLAST of HG10002959 vs. NCBI nr
Match:
XP_008448593.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo])
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 748/805 (92.92%), Postives = 774/805 (96.15%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEE+C+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS + AFSGN LS+VGGLGASPGSG+ GK NVS ASFEQPK NQSHVPH+GSYSNP
Sbjct: 121 SATRSSAS-AFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PP YSKT+PG+RFNGSSPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQP+YQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 PQPMYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVA+VGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HNLGFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSS NCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSMNCPSIMS 804
BLAST of HG10002959 vs. NCBI nr
Match:
XP_004146122.1 (replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus] >KGN55692.1 hypothetical protein Csa_011631 [Cucumis sativus])
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 749/805 (93.04%), Postives = 773/805 (96.02%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEEMC+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS A SGN L +VGGLGASPGSG+ GK NVSSASFEQPKVNQSHVPH+GSYSNP
Sbjct: 121 SATRSS-ANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PPSYSKTD G+RFNG SPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQPIYQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVTSKGELRHYNNPRG
Sbjct: 241 PQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKN+NHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVASVGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVD+FCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HN GFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSSTNCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
BLAST of HG10002959 vs. NCBI nr
Match:
KAA0052992.1 (replication protein A 70 kDa DNA-binding subunit A [Cucumis melo var. makuwa] >TYK11448.1 replication protein A 70 kDa DNA-binding subunit A [Cucumis melo var. makuwa])
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 748/805 (92.92%), Postives = 774/805 (96.15%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEE+C+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS + AFSGN LS+VGGLGASPGSG+ GK NVS ASFEQPK NQSHVPH+GSYSNP
Sbjct: 121 SATRSSAS-AFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PP YSKT+PG+RFNGSSPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQP+YQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 PQPMYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVA+VGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HNLGFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSS NCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSMNCPSIMS 804
BLAST of HG10002959 vs. NCBI nr
Match:
XP_038903949.1 (replication protein A 70 kDa DNA-binding subunit A-like [Benincasa hispida])
HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 747/803 (93.03%), Postives = 769/803 (95.77%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEEMC IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCGIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SAT+S+ TGAF GN LS+ G LGASPGSG+ GKVNVSSAS EQPKVNQSHVPH+GSYSNP
Sbjct: 121 SATKSA-TGAFIGNSLSSGGALGASPGSGMIGKVNVSSASLEQPKVNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRPQ 240
E+GR+SAS+ PP Y KTDPGTRFNG SPLTGSYG+QKMAYHNSGSD+PRPPLN+Y PQ
Sbjct: 181 PETGRFSASVVPPPYPKTDPGTRFNGPSPLTGSYGNQKMAYHNSGSDIPRPPLNSYPCPQ 240
Query: 241 PIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDG 300
P YQQPPS+YSNRGPVAKNEAAPRIMPI+ALNPYQGRWTIKARVTSKGELRHYNNPRGDG
Sbjct: 241 PTYQQPPSLYSNRGPVAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDG 300
Query: 301 KVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEI 360
KVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLK DYEI
Sbjct: 301 KVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKYDYEI 360
Query: 361 FLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNG 420
LENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNG
Sbjct: 361 VLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNG 420
Query: 421 TETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKA 480
TETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNGKA
Sbjct: 421 TETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKA 480
Query: 481 VGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDER 540
VGTISTSQLFVEP FPEARTLREWFEK GRSTPSVS+SREVASVGRTD RKTISQIKDER
Sbjct: 481 VGTISTSQLFVEPDFPEARTLREWFEKEGRSTPSVSLSREVASVGRTDARKTISQIKDER 540
Query: 541 LGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVD 600
LGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD+SVD
Sbjct: 541 LGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDESVD 600
Query: 601 ECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVL 660
ECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVL
Sbjct: 601 ECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVL 660
Query: 661 FTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKAE 720
FTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FS ESRFLLDLM+K RAEN SSVTPKAE
Sbjct: 661 FTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSMESRFLLDLMEKHRAENNSSVTPKAE 720
Query: 721 STMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQLN 780
S +HNLGF DPAS NIGGGQFVSPIRN TNVGREYGTPNQG+QYGNQYSSSRPS ST LN
Sbjct: 721 SAIHNLGFHDPASVNIGGGQFVSPIRNITNVGREYGTPNQGIQYGNQYSSSRPSQSTPLN 780
Query: 781 SNTYCNSCGGSGHSSTNCPSIMS 804
S+TYCNSCGGSGHSS NCPSIMS
Sbjct: 781 SSTYCNSCGGSGHSSMNCPSIMS 802
BLAST of HG10002959 vs. NCBI nr
Match:
XP_022944134.1 (replication protein A 70 kDa DNA-binding subunit A [Cucurbita moschata] >KAG6596695.1 Replication protein A 70 kDa DNA-binding subunit C, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1389.0 bits (3594), Expect = 0.0e+00
Identity = 709/805 (88.07%), Postives = 750/805 (93.17%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA KLTEGAVM+ICKRES+AETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMAQFKLTEGAVMMICKRESTAETFQPVVQVIDLKLVNTAQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
YQQGMLGTQLN LVKSGKLQ GSIV+L+QYVCNPVQERLIIIVIELDV+ EMCE IG+PV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLKQYVCNPVQERLIIIVIELDVVVEMCEFIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
ATR SVTGAFSGN S+V SP SGI GK+NVSSAS E PKVNQSH HVG+YSN
Sbjct: 121 PATR-SVTGAFSGNPQSSV---ATSPSSGIAGKMNVSSASSELPKVNQSHASHVGAYSNT 180
Query: 181 TESGRYSASITPPSY-SKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRP 240
ESGRY+ASI PP Y +KTDPGTRFNGSS L+GSYGDQKMAYHN+GSD PRPPLNAY P
Sbjct: 181 PESGRYTASIAPPLYPNKTDPGTRFNGSSSLSGSYGDQKMAYHNNGSDNPRPPLNAYACP 240
Query: 241 QPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
QP YQQPPSMYSNRGPVAKNEA PRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD
Sbjct: 241 QPTYQQPPSMYSNRGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYE 360
GKVFSFDLLDA+RGEIRVTCFN VADQFYNQIE GKVYFISKGSLKPAQKN+NHLKND+E
Sbjct: 301 GKVFSFDLLDAHRGEIRVTCFNMVADQFYNQIEPGKVYFISKGSLKPAQKNFNHLKNDFE 360
Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
IFLE+TSTIQPCFEDDQSIPQQQFHFHQISEIEGMD+NSVVD+IGVV+SINP+TS+MRKN
Sbjct: 361 IFLESTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDNNSVVDLIGVVTSINPSTSIMRKN 420
Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGK 480
G ETQKR+LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSG+FPVLAVKSGRVSDFNGK
Sbjct: 421 GIETQKRTLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGMFPVLAVKSGRVSDFNGK 480
Query: 481 AVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDE 540
AVGTIS+SQL VEP FPEARTLREWFEK GRSTPSVSISREV+S+GRTDVRKTISQIKDE
Sbjct: 481 AVGTISSSQLSVEPDFPEARTLREWFEKEGRSTPSVSISREVSSIGRTDVRKTISQIKDE 540
Query: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGVPAKRLYYLKYEEQDDEKFAEIIRKV 660
Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKA 720
LFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FSTESRFLLDLM+KLRAEN SSVTPK
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSTESRFLLDLMEKLRAENASSVTPKT 720
Query: 721 ESTMHNLGFRDPASGNIGGGQFVSPIRNSTNV-GREYGTPNQGVQYGNQYSSSRPSPSTQ 780
EST+H+LG R +GN+GGGQFVSP RN +NV REYGTPN GVQY NQYSSSRPSPS
Sbjct: 721 ESTIHDLGLR--GAGNVGGGQFVSPSRNISNVSSREYGTPNLGVQYENQYSSSRPSPSMV 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
NS+TYCNSCGGSGHSS NCPSI S
Sbjct: 781 HNSHTYCNSCGGSGHSSMNCPSITS 799
BLAST of HG10002959 vs. ExPASy Swiss-Prot
Match:
Q9FHJ6 (Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=3702 GN=RPA1C PE=3 SV=1)
HSP 1 Score: 837.8 bits (2163), Expect = 1.1e-241
Identity = 457/836 (54.67%), Postives = 570/836 (68.18%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPILQVIDLKLVNT---SQQSGSERFRLLVSDGTHYQQGM 69
LTEG VM + E ++ET P+LQV +LKL+ + Q S R++ L+SDGT GM
Sbjct: 5 LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64
Query: 70 LGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSATRS 129
L T LN LV G +Q+GS++RL Y+CN +Q R I+++++L+VI E C IG+P S
Sbjct: 65 LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124
Query: 130 SVTGAFSGNLLSTVGGLGASPG--SGITGKVNVSSASFEQPKV--NQS---------HVP 189
S+ G + GG S + G SA+ QP+V N S + P
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVSANSP 184
Query: 190 HVGSYSNPTESGRYSASITPPS------------------YSKTDPGTRFNGSSPLTGSY 249
+ +++GRY S P + G+ + +SP T Y
Sbjct: 185 QPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPSTRPY 244
Query: 250 GDQKMAYHNSGSDVPRPP--LNAYGRP-QPIYQ-QPPSMYSNRGPVAKNEAAPRIMPITA 309
Y S D PR P AY RP Q YQ Q P MY NRGPVA+NEA PRI PI A
Sbjct: 245 VSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRINPIAA 304
Query: 310 LNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQ 369
LNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA GEIRVTCFN DQF+++
Sbjct: 305 LNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFDK 364
Query: 370 IESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQISE 429
I G VY IS+G+LKPAQKN+NHL NDYEI L++ STIQPC EDD +IP+ FHF I +
Sbjct: 365 IVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRYHFHFRNIGD 424
Query: 430 IEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAE 489
IE M++NS DVIG+VSSI+P ++MRKN TE QKRSLQLKDMSGRSVE+T+WGNFC AE
Sbjct: 425 IENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNFCNAE 484
Query: 490 GQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPGFPEARTLREWFEKGGR 549
GQ+LQN+CDSG+FPVLA+K+GR+ +FNGK V TI SQ F+EP FPEAR LR+W+E+ GR
Sbjct: 485 GQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREGR 544
Query: 550 STPSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDNFCYTACP 609
+ SISRE + VGR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV+NFCYTACP
Sbjct: 545 NAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFCYTACP 604
Query: 610 IMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEE 669
IM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW TAFQE GEE
Sbjct: 605 IMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGEE 664
Query: 670 IMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAES 729
IMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLKIKEET+SDEQRV++TVVKAE
Sbjct: 665 IMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAEK 724
Query: 730 IDFSTESRFLLDLMDKLRAENTSSVTPKAESTMHNLGFRDPASGNIGGGQFVSPIRNSTN 789
+++S+ +RF+L+ +DKL+ + +S+ KAES+ +R A N G G + S +
Sbjct: 725 LNYSSNTRFMLEAIDKLKIGDANSLPIKAESS----NYRSDAF-NSGVGTSGTRDTASVD 784
Query: 790 VGREYGTP--NQGVQYGNQYSSSRPSPSTQLNSNTYCNSCGGSGHSSTNCPSIMSE 805
RE+G P NQ QYGNQYSS S L T CN C + H S NCP++MSE
Sbjct: 785 ARREFGLPAANQVGQYGNQYSSDARS----LGGFTSCNVCRSNSHVSANCPTLMSE 830
BLAST of HG10002959 vs. ExPASy Swiss-Prot
Match:
F4JSG3 (Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=3702 GN=RPA1E PE=2 SV=1)
HSP 1 Score: 798.5 bits (2061), Expect = 7.1e-230
Identity = 436/793 (54.98%), Postives = 553/793 (69.74%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHYQQGMLGT 69
LT GA+ I E + E P+LQV DLK + Q ERFR+++SDGT+ QGMLGT
Sbjct: 5 LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64
Query: 70 QLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV-SATRSSV 129
LN LVK G LQ GSIVRL ++V + ++ R I+IV +L+V++++ + IG PV +
Sbjct: 65 DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGKHNDQ 124
Query: 130 TGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNPTESGRYS 189
GA SG +T GSGI N+ E + N + P VG +
Sbjct: 125 RGADSGIKFNTT----EQQGSGIRQVNNI-----EPGRSNAAISPQVGG----------T 184
Query: 190 ASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRPQPIYQQPP 249
S P S T P TR S+P +G+ G + Y PP + +PQP PP
Sbjct: 185 GSSVPAS---TTPSTRAY-SNPSSGN-GVTRQDYARD------PPTSYPHQPQP----PP 244
Query: 250 SMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDL 309
MY+NRGPVA+NEA P+I+P+ AL+PY GRWTIKARVT+K L+ Y+NPRG+GKVF+FDL
Sbjct: 245 PMYANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDL 304
Query: 310 LDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTST 369
LDA GEIRVTCFN VADQFY+QI G +Y IS+GSL+PAQKN+NHL+NDYEI L+N ST
Sbjct: 305 LDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNAST 364
Query: 370 IQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRS 429
I+ C+E+D +IP+ QFHF I +IE M++N +VDVIG+VSSI+P ++ RKNGT T KRS
Sbjct: 365 IKQCYEEDAAIPRHQFHFRTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKRS 424
Query: 430 LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTS 489
LQLKDMSGRSVE+T+WG+FC AEGQRLQ++CDSG+FPVLAVK+GR+S+FNGK V TI +S
Sbjct: 425 LQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSS 484
Query: 490 QLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDERLGTSEKP 549
QLF++P F EA L+ WFE+ G+S P +S+SRE + G+ DVRKTISQIKDE+LGTSEKP
Sbjct: 485 QLFIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEKP 544
Query: 550 DWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYI 609
DWITVSAT+ ++K DNFCYTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRYI
Sbjct: 545 DWITVSATILYLKFDNFCYTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYI 604
Query: 610 LQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMK 669
LQLQIQDHT LT VTAFQE GEEIMGI AK LYY+K E +D+EKF +IIRKV FTK+ K
Sbjct: 605 LQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFK 664
Query: 670 LKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKAESTMHNLG 729
LK+KEETFSDEQRV++TVVK + +++S ++R +L MDKLR + +S+ E + +N
Sbjct: 665 LKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYN-- 724
Query: 730 FRDPASGNIGGGQFVSPIRNSTNVGREYGT-PNQGVQYGNQYSSSRPSPSTQLNSNTYCN 789
D + IG P S+ R++G +Q Q GN YS + T CN
Sbjct: 725 -ADVVNTGIGSSGTRDP---SSVQRRDFGLHAHQSGQSGNHYSGG--------GATTSCN 749
Query: 790 SCGGSGHSSTNCP 800
CG SGH S CP
Sbjct: 785 VCGNSGHVSAKCP 749
BLAST of HG10002959 vs. ExPASy Swiss-Prot
Match:
Q9SKI4 (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1)
HSP 1 Score: 697.2 bits (1798), Expect = 2.2e-199
Identity = 355/700 (50.71%), Postives = 480/700 (68.57%), Query Frame = 0
Query: 7 PSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHYQQGML 66
P LT A+ I +P+LQV+++K++ SQ+ ER+R L+SDG Q M+
Sbjct: 2 PVSLTPNAITAI---HDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMV 61
Query: 67 GTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSATRSS 126
QLN+ VKSG+ + GSIV+L Y+C+ V+ R +I+V+ ++ I + E IG+P +
Sbjct: 62 AVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNP------T 121
Query: 127 VTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNPTESGRY 186
+ G T G G P + F +P V ++
Sbjct: 122 IFGETDTEAQKTFSGTGNIPPP--------NRVVFNEPMV------------------QH 181
Query: 187 SASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRPQPIYQQP 246
S + PP G + T S+ RP + QP Y QP
Sbjct: 182 SVNRAPPR------GVNIQNQANNTPSF---------------RPSV------QPSY-QP 241
Query: 247 PSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFD 306
P+ Y N GP+ KNEA R++PI ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFD
Sbjct: 242 PASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFD 301
Query: 307 LLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTS 366
LLD GEIRVTCFN + D+FY+ E GKVY ISKGSLKPAQKN+NHLKN++EIFLE+TS
Sbjct: 302 LLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTS 361
Query: 367 TIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKR 426
T++ C ++D SIP+QQF F IS+IE ++N+++DVIGVV+S+NP+ ++RKNG ET +R
Sbjct: 362 TVELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRR 421
Query: 427 SLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTIST 486
L LKD SG++VE+TLWG FC +G++L+ M DS PVLA+K+G+VSDF+GK+VGTIS+
Sbjct: 422 ILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISS 481
Query: 487 SQLFVEPGFPEARTLREWFEKGGRSTPSVSISREV--ASVGRTDVRKTISQIKDERLGTS 546
+QLF+ P FPEA LR WF+ GG+ T S SISR+ V R ++RK +SQIK+E LG S
Sbjct: 482 TQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRS 541
Query: 547 EKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDY 606
+KPDWITV AT+SFIK D+FCYTACP+MIGD+QC+KKVT +G +W CDRC+Q DECDY
Sbjct: 542 DKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDY 601
Query: 607 RYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKF 666
RY+LQ+QIQDHTGLTW+TAFQE GEEIMG PAK+LY +KYE + +E+FAEI+R LF ++
Sbjct: 602 RYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQY 638
Query: 667 IMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLM 705
++KLKIKEE++ DEQRV+ TVVK + +++++ES+++LDL+
Sbjct: 662 MLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLL 638
BLAST of HG10002959 vs. ExPASy Swiss-Prot
Match:
Q65XV7 (Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1C PE=1 SV=1)
HSP 1 Score: 656.8 bits (1693), Expect = 3.3e-187
Identity = 379/841 (45.07%), Postives = 519/841 (61.71%), Query Frame = 0
Query: 9 KLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQ----QSGSERFRLLVSDGTHYQQG 68
+LT GAV I + T QP+LQV+D++ V T +ERFR+++SDG + QQ
Sbjct: 4 QLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNTQQS 63
Query: 69 MLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSATR 128
ML T LN LVK L+ G++V+L ++CN +Q + IIIV++LDV++ C IG+P
Sbjct: 64 MLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKHYEP 123
Query: 129 SSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSA-SFEQPKVNQSH------------- 188
S+T NL ++V SG + S A EQ N S+
Sbjct: 124 KSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPRAEQAASNSSYGGPYNSAQGMLGS 183
Query: 189 ------------VPHVGSYSNPTESGRYSASITPP-------SYSKTDPGTRFNGSSPLT 248
V VGSY + +A++ P + + P ++ N + T
Sbjct: 184 SIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQPTSQLNIMNANTMQPTSQLNTMNANT 243
Query: 249 ----------GSYGDQKMAYHNSGSDVPRPPLNAYGRP-QPIYQQPPSMYSNRGPVAKNE 308
+Q+ A SG V PP NAYG+P +P YQQPP +Y NRGP ++N+
Sbjct: 244 MQPTSQLSSLNPNQNQRFAAPASGG-VFGPPGNAYGQPSRPSYQQPPPVYMNRGPASRND 303
Query: 309 AAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCF 368
+A RI+PITALNPYQ +WTIKARVT+K ++RH++N R G VFSFDLLDA GEIR C+
Sbjct: 304 SATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQGGEIRAQCW 363
Query: 369 NTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLE-NTSTIQPCFEDDQSIP 428
AD+F+ QIE G+VY IS+GSLKPAQK YN L +DYEI L+ ST++ C +DD SIP
Sbjct: 364 KESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCSDDDNSIP 423
Query: 429 QQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVE 488
+ Q++F QISE+E M + ++VD++GVV+S++P+ ++MRK GTET+KRS+QLKD+SGRS+E
Sbjct: 424 RLQYNFRQISELENMANETIVDLLGVVTSVSPSATIMRKIGTETRKRSIQLKDLSGRSIE 483
Query: 489 LTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPGFPEAR 548
+TLWGNFC AEGQ+LQ CDSG P++A K RV DFNGK+V TI ++QL + P FPE
Sbjct: 484 VTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQLIINPDFPEVE 543
Query: 549 TLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFI 608
LR+W+ G++ P +S+SRE+ ++GRTD RKTI+QIKDE LG EKPDWITV A +S +
Sbjct: 544 RLRQWYMTEGKTAPCISLSREMLNMGRTDARKTIAQIKDENLGRLEKPDWITVKAAISHV 603
Query: 609 KVDNFCYTACPIMIG-DRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 668
++FCY ACP ++ RQC+KK NNGDG W CDRCD+S +YRY+L+ QIQDHTG
Sbjct: 604 TTESFCYPACPKLLPVGRQCNKKAINNGDGMWHCDRCDESFQNPEYRYMLRFQIQDHTGS 663
Query: 669 TWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDE 728
T+ +AF E GE+I G A L+ ++ +QDD +FAEII V + ++ KLK+KEET++DE
Sbjct: 664 TYASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETYNDE 723
Query: 729 QRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKAESTM-HNLGFRDPASGNIG 788
Q ++ T VK E +D S ES LL +D L + PK +S + N GF DP G+
Sbjct: 724 QSLKCTAVKVEKLDPSKESNVLLGAIDNLLLD------PKGQSDLAPNAGFTDPVGGH-- 783
Query: 789 GGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQLNSNTYCNSCGGSGHSSTN 799
G S + N G G G Q S P +T+ N T C+ CG +GHS+
Sbjct: 784 -GAPTSSNAYAMNTG---GVNQFGQQASISAGMSTPLAATR-NLQT-CSICGANGHSAQI 829
BLAST of HG10002959 vs. ExPASy Swiss-Prot
Match:
Q6YZ49 (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1)
HSP 1 Score: 631.7 bits (1628), Expect = 1.1e-179
Identity = 338/715 (47.27%), Postives = 466/715 (65.17%), Query Frame = 0
Query: 5 MAPSKLTEGAVMVICKRESSAETFQPILQVIDLK--LVNTSQQSGSERFRLLVSDGTHYQ 64
MA ++LT V +++ +P+LQ+++L+ VN + + ERFR +VSDGT
Sbjct: 1 MAMARLTPNGVAAALAGDTN---LKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAAS 60
Query: 65 QGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSA 124
+ QL++ +SG L+ GSIV+L +YV N V R II+++ L+V+ CE IG+P
Sbjct: 61 SALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNP--- 120
Query: 125 TRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNPTE 184
T S TG S +P NPT
Sbjct: 121 TALSETG---------------------------------------SPIP------NPTR 180
Query: 185 SGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNS----GSDVPRPPLNAYGR 244
+++ + P Y G SS T D + NS S+ P +
Sbjct: 181 VEQFNGA---PQY-----GLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPV 240
Query: 245 PQPIYQ---QPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNN 304
QP Q +P Y N G + KNEA RI+PI+ALNPYQGRW IKARVT+KG++R Y+N
Sbjct: 241 FQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHN 300
Query: 305 PRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLK 364
+GDGKVFSFDLLD+ GEIRVTCFN + D+FY +E GKVY +S+G+L+PAQKNYNHL
Sbjct: 301 AKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLN 360
Query: 365 NDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSL 424
N++EI LEN ST+ C +++ SIP Q+F F I+EIE +N+++D+IGVV+S+NP T++
Sbjct: 361 NEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTI 420
Query: 425 MRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSD 484
RKNG ETQKR++ LKDMSGRSVE+T+WG+FC EG +LQ M + G+FPVLAVK+G+VSD
Sbjct: 421 QRKNGMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSD 480
Query: 485 FNGKAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVA-SVGRTDVRKTIS 544
F+GK+VGTIS++QLF+ P EA +LR+WF+ GGR + SISR++ R ++RKT++
Sbjct: 481 FSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNEIRKTVA 540
Query: 545 QIKDERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDR 604
QIKDE LG +KPDWITV ATV F K ++F YTACP MIGDRQC+KKVT + +G W CD+
Sbjct: 541 QIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDK 600
Query: 605 CDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAE 664
CD+ +ECDYRY+LQ QIQDH+G WVTAFQE G+E++G A L LK E++D +FA+
Sbjct: 601 CDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALK--EREDPRFAD 654
Query: 665 IIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRA 710
+ LF +++++LK+KEE++ DE++V++T VK E +D S ES+FLLDL+ K A
Sbjct: 661 TMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKSSA 654
BLAST of HG10002959 vs. ExPASy TrEMBL
Match:
A0A5D3CJS6 (Replication protein A subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001050 PE=3 SV=1)
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 748/805 (92.92%), Postives = 774/805 (96.15%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEE+C+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS + AFSGN LS+VGGLGASPGSG+ GK NVS ASFEQPK NQSHVPH+GSYSNP
Sbjct: 121 SATRSSAS-AFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PP YSKT+PG+RFNGSSPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQP+YQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 PQPMYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVA+VGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HNLGFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSS NCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSMNCPSIMS 804
BLAST of HG10002959 vs. ExPASy TrEMBL
Match:
A0A0A0L503 (Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005560 PE=3 SV=1)
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 749/805 (93.04%), Postives = 773/805 (96.02%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEEMC+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS A SGN L +VGGLGASPGSG+ GK NVSSASFEQPKVNQSHVPH+GSYSNP
Sbjct: 121 SATRSS-ANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PPSYSKTD G+RFNG SPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQPIYQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVTSKGELRHYNNPRG
Sbjct: 241 PQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKN+NHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVASVGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVD+FCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HN GFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSSTNCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
BLAST of HG10002959 vs. ExPASy TrEMBL
Match:
A0A1S3BKX8 (Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103490723 PE=3 SV=1)
HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 748/805 (92.92%), Postives = 774/805 (96.15%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA SKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
+QQGMLGTQLNELVKSGKLQ GSIVRLRQYVCNPVQERLIIIVIELDVIEE+C+ IG+PV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
SATRSS + AFSGN LS+VGGLGASPGSG+ GK NVS ASFEQPK NQSHVPH+GSYSNP
Sbjct: 121 SATRSSAS-AFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNP 180
Query: 181 TESGRYSASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPL--NAYGR 240
E+GR+SASI PP YSKT+PG+RFNGSSPLTGSYGDQKMAYHNSGSD+PRPPL NAY R
Sbjct: 181 PETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYAR 240
Query: 241 PQPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
PQP+YQQPPSMYSNRGP+AKNEAAPRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 PQPMYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQPCFEDDQSIPQQQFHFHQI EIEGMDSNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKD 540
KAVGTISTSQLF+EP FPEA +LREWFE+ GRST SVSISREVA+VGRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPK 720
VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFS+ESRFLL+LM+KL+ EN+SS TPK
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AESTMHNLGFRDPASGNIGGGQFVSPIRNSTNVGREYGTPNQGVQYGNQYSSSRPSPSTQ 780
AEST+HNLGFRD AS NIGGGQFVSPIRNSTN REYGTPNQGVQYGNQYSSSRPSPST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTP 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
LNSNTYCNSCGGSGHSS NCPSIMS
Sbjct: 781 LNSNTYCNSCGGSGHSSMNCPSIMS 804
BLAST of HG10002959 vs. ExPASy TrEMBL
Match:
A0A6J1FW46 (Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111448678 PE=3 SV=1)
HSP 1 Score: 1389.0 bits (3594), Expect = 0.0e+00
Identity = 709/805 (88.07%), Postives = 750/805 (93.17%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA KLTEGAVM+ICKRES+AETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMAQFKLTEGAVMMICKRESTAETFQPVVQVIDLKLVNTAQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
YQQGMLGTQLN LVKSGKLQ GSIV+L+QYVCNPVQERLIIIVIELDV+ EMCE IG+PV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLKQYVCNPVQERLIIIVIELDVVVEMCEFIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
ATR SVTGAFSGN S+V SP SGI GK+NVSSAS E PKVNQSH HVG+YSN
Sbjct: 121 PATR-SVTGAFSGNPQSSV---ATSPSSGIAGKMNVSSASSELPKVNQSHASHVGAYSNT 180
Query: 181 TESGRYSASITPPSY-SKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRP 240
ESGRY+ASI PP Y +KTDPGTRFNGSS L+GSYGDQKMAYHN+GSD PRPPLNAY P
Sbjct: 181 PESGRYTASIAPPLYPNKTDPGTRFNGSSSLSGSYGDQKMAYHNNGSDNPRPPLNAYACP 240
Query: 241 QPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
QP YQQPPSMYSNRGPVAKNEA PRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD
Sbjct: 241 QPTYQQPPSMYSNRGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYE 360
GKVFSFDLLDA+RGEIRVTCFN VADQFYNQIE GKVYFISKGSLKPAQKN+NHLKND+E
Sbjct: 301 GKVFSFDLLDAHRGEIRVTCFNMVADQFYNQIEPGKVYFISKGSLKPAQKNFNHLKNDFE 360
Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
IFLE+TSTIQPCFEDDQSIPQQQFHFHQISEIEGMD+NSVVD+IGVV+SINP+TS+MRKN
Sbjct: 361 IFLESTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDNNSVVDLIGVVTSINPSTSIMRKN 420
Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGK 480
G ETQKR+LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSG+FPVLAVKSGRVSDFNGK
Sbjct: 421 GIETQKRTLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGMFPVLAVKSGRVSDFNGK 480
Query: 481 AVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDE 540
AVGTIS+SQL VEP FPEARTLREWFEK GRSTPSVSISREV+S+GRTDVRKTISQIKDE
Sbjct: 481 AVGTISSSQLSVEPDFPEARTLREWFEKEGRSTPSVSISREVSSIGRTDVRKTISQIKDE 540
Query: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGVPAKRLYYLKYEEQDDEKFAEIIRKV 660
Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKA 720
LFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FSTESRFLLDLM+KLRAEN SSVTPK
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSTESRFLLDLMEKLRAENASSVTPKT 720
Query: 721 ESTMHNLGFRDPASGNIGGGQFVSPIRNSTNV-GREYGTPNQGVQYGNQYSSSRPSPSTQ 780
EST+H+LG R +GN+GGGQFVSP RN +NV REYGTPN GVQY NQYSSSRPSPS
Sbjct: 721 ESTIHDLGLR--GAGNVGGGQFVSPSRNISNVSSREYGTPNLGVQYENQYSSSRPSPSMV 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
NS+TYCNSCGGSGHSS NCPSI S
Sbjct: 781 HNSHTYCNSCGGSGHSSMNCPSITS 799
BLAST of HG10002959 vs. ExPASy TrEMBL
Match:
A0A6J1KSC4 (Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111498272 PE=3 SV=1)
HSP 1 Score: 1373.6 bits (3554), Expect = 0.0e+00
Identity = 702/805 (87.20%), Postives = 746/805 (92.67%), Query Frame = 0
Query: 1 MAASMAPSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
MAASMA KLTEGAVM+ICKRES+AETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMAQFKLTEGAVMMICKRESTAETFQPVVQVIDLKLVNTAQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV 120
YQQGMLGTQLN LVKSGKLQ GSIV+L+QYVCNPVQERLIIIVIELDV+ EMCE IG+PV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLKQYVCNPVQERLIIIVIELDVVVEMCEFIGEPV 120
Query: 121 SATRSSVTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNP 180
ATR SVTGAF+GN S+V SP SGI GK+NVSSAS E PKVNQSH HVG+YSN
Sbjct: 121 PATR-SVTGAFNGNPQSSV---VTSPSSGIAGKMNVSSASSELPKVNQSHASHVGAYSNT 180
Query: 181 TESGRYSASITPPSY-SKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRP 240
ESGRY+ASI PP Y +KTDPGTRFNGSS L+GSYGDQKMAYHN+GSD PRPPLNAY P
Sbjct: 181 PESGRYTASIAPPLYPNKTDPGTRFNGSSSLSGSYGDQKMAYHNNGSDDPRPPLNAYACP 240
Query: 241 QPIYQQPPSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
QP YQQPPSMYSNRG VAKNEA PRIMPI ALNPYQGRWTIKARVTSKGELRHYNNPRGD
Sbjct: 241 QPTYQQPPSMYSNRGSVAKNEAPPRIMPINALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYE 360
GKVFSFDLLDA+RGEIRVTCFN VADQFYNQIE GKVYFISKGSLKPAQKN+NHLKND+E
Sbjct: 301 GKVFSFDLLDAHRGEIRVTCFNMVADQFYNQIEPGKVYFISKGSLKPAQKNFNHLKNDFE 360
Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
IFLE+TSTIQPCFEDDQSIP+QQFHFHQISEIEGMD+NSVVD+IGVV+SINP+TS+MRKN
Sbjct: 361 IFLESTSTIQPCFEDDQSIPKQQFHFHQISEIEGMDNNSVVDLIGVVTSINPSTSIMRKN 420
Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGK 480
G ETQKR+LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSG+FPVLAVK+GRVSDFNGK
Sbjct: 421 GIETQKRTLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGMFPVLAVKTGRVSDFNGK 480
Query: 481 AVGTISTSQLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDE 540
AVGTIS+SQL VEP FPEARTLREWFE GRSTPSVSISREV+S+GRTDVRKTISQIKDE
Sbjct: 481 AVGTISSSQLSVEPDFPEARTLREWFENEGRSTPSVSISREVSSIGRTDVRKTISQIKDE 540
Query: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGVPAKRLYYLKYEEQDDEKFAEIIRKV 660
Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKA 720
LFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FSTESRFLLDLM+KLRAEN SSVTPK
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSTESRFLLDLMEKLRAENASSVTPKT 720
Query: 721 ESTMHNLGFRDPASGNIGGGQFVSPIRNSTNV-GREYGTPNQGVQYGNQYSSSRPSPSTQ 780
EST+H+LG R +GN+GGGQFVSP RN +NV REY TPN GVQY NQYSSSRPSPS
Sbjct: 721 ESTIHDLGLR--GTGNVGGGQFVSPSRNISNVSSREYVTPNLGVQYENQYSSSRPSPSMV 780
Query: 781 LNSNTYCNSCGGSGHSSTNCPSIMS 804
NS+TYCNSCGGSGHSS NCPSI S
Sbjct: 781 HNSHTYCNSCGGSGHSSMNCPSITS 799
BLAST of HG10002959 vs. TAIR 10
Match:
AT5G45400.1 (Replication factor-A protein 1-related )
HSP 1 Score: 837.8 bits (2163), Expect = 7.5e-243
Identity = 457/836 (54.67%), Postives = 570/836 (68.18%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPILQVIDLKLVNT---SQQSGSERFRLLVSDGTHYQQGM 69
LTEG VM + E ++ET P+LQV +LKL+ + Q S R++ L+SDGT GM
Sbjct: 5 LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64
Query: 70 LGTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSATRS 129
L T LN LV G +Q+GS++RL Y+CN +Q R I+++++L+VI E C IG+P S
Sbjct: 65 LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124
Query: 130 SVTGAFSGNLLSTVGGLGASPG--SGITGKVNVSSASFEQPKV--NQS---------HVP 189
S+ G + GG S + G SA+ QP+V N S + P
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVSANSP 184
Query: 190 HVGSYSNPTESGRYSASITPPS------------------YSKTDPGTRFNGSSPLTGSY 249
+ +++GRY S P + G+ + +SP T Y
Sbjct: 185 QPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPSTRPY 244
Query: 250 GDQKMAYHNSGSDVPRPP--LNAYGRP-QPIYQ-QPPSMYSNRGPVAKNEAAPRIMPITA 309
Y S D PR P AY RP Q YQ Q P MY NRGPVA+NEA PRI PI A
Sbjct: 245 VSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRINPIAA 304
Query: 310 LNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQ 369
LNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA GEIRVTCFN DQF+++
Sbjct: 305 LNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFDK 364
Query: 370 IESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQISE 429
I G VY IS+G+LKPAQKN+NHL NDYEI L++ STIQPC EDD +IP+ FHF I +
Sbjct: 365 IVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRYHFHFRNIGD 424
Query: 430 IEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAE 489
IE M++NS DVIG+VSSI+P ++MRKN TE QKRSLQLKDMSGRSVE+T+WGNFC AE
Sbjct: 425 IENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNFCNAE 484
Query: 490 GQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPGFPEARTLREWFEKGGR 549
GQ+LQN+CDSG+FPVLA+K+GR+ +FNGK V TI SQ F+EP FPEAR LR+W+E+ GR
Sbjct: 485 GQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREGR 544
Query: 550 STPSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDNFCYTACP 609
+ SISRE + VGR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV+NFCYTACP
Sbjct: 545 NAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFCYTACP 604
Query: 610 IMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEE 669
IM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW TAFQE GEE
Sbjct: 605 IMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGEE 664
Query: 670 IMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAES 729
IMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLKIKEET+SDEQRV++TVVKAE
Sbjct: 665 IMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAEK 724
Query: 730 IDFSTESRFLLDLMDKLRAENTSSVTPKAESTMHNLGFRDPASGNIGGGQFVSPIRNSTN 789
+++S+ +RF+L+ +DKL+ + +S+ KAES+ +R A N G G + S +
Sbjct: 725 LNYSSNTRFMLEAIDKLKIGDANSLPIKAESS----NYRSDAF-NSGVGTSGTRDTASVD 784
Query: 790 VGREYGTP--NQGVQYGNQYSSSRPSPSTQLNSNTYCNSCGGSGHSSTNCPSIMSE 805
RE+G P NQ QYGNQYSS S L T CN C + H S NCP++MSE
Sbjct: 785 ARREFGLPAANQVGQYGNQYSSDARS----LGGFTSCNVCRSNSHVSANCPTLMSE 830
BLAST of HG10002959 vs. TAIR 10
Match:
AT4G19130.1 (Replication factor-A protein 1-related )
HSP 1 Score: 798.5 bits (2061), Expect = 5.0e-231
Identity = 436/793 (54.98%), Postives = 553/793 (69.74%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHYQQGMLGT 69
LT GA+ I E + E P+LQV DLK + Q ERFR+++SDGT+ QGMLGT
Sbjct: 5 LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64
Query: 70 QLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPV-SATRSSV 129
LN LVK G LQ GSIVRL ++V + ++ R I+IV +L+V++++ + IG PV +
Sbjct: 65 DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGKHNDQ 124
Query: 130 TGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNPTESGRYS 189
GA SG +T GSGI N+ E + N + P VG +
Sbjct: 125 RGADSGIKFNTT----EQQGSGIRQVNNI-----EPGRSNAAISPQVGG----------T 184
Query: 190 ASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRPQPIYQQPP 249
S P S T P TR S+P +G+ G + Y PP + +PQP PP
Sbjct: 185 GSSVPAS---TTPSTRAY-SNPSSGN-GVTRQDYARD------PPTSYPHQPQP----PP 244
Query: 250 SMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDL 309
MY+NRGPVA+NEA P+I+P+ AL+PY GRWTIKARVT+K L+ Y+NPRG+GKVF+FDL
Sbjct: 245 PMYANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDL 304
Query: 310 LDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTST 369
LDA GEIRVTCFN VADQFY+QI G +Y IS+GSL+PAQKN+NHL+NDYEI L+N ST
Sbjct: 305 LDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNAST 364
Query: 370 IQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRS 429
I+ C+E+D +IP+ QFHF I +IE M++N +VDVIG+VSSI+P ++ RKNGT T KRS
Sbjct: 365 IKQCYEEDAAIPRHQFHFRTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKRS 424
Query: 430 LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTS 489
LQLKDMSGRSVE+T+WG+FC AEGQRLQ++CDSG+FPVLAVK+GR+S+FNGK V TI +S
Sbjct: 425 LQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSS 484
Query: 490 QLFVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKTISQIKDERLGTSEKP 549
QLF++P F EA L+ WFE+ G+S P +S+SRE + G+ DVRKTISQIKDE+LGTSEKP
Sbjct: 485 QLFIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEKP 544
Query: 550 DWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYI 609
DWITVSAT+ ++K DNFCYTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRYI
Sbjct: 545 DWITVSATILYLKFDNFCYTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYI 604
Query: 610 LQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMK 669
LQLQIQDHT LT VTAFQE GEEIMGI AK LYY+K E +D+EKF +IIRKV FTK+ K
Sbjct: 605 LQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFK 664
Query: 670 LKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDKLRAENTSSVTPKAESTMHNLG 729
LK+KEETFSDEQRV++TVVK + +++S ++R +L MDKLR + +S+ E + +N
Sbjct: 665 LKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYN-- 724
Query: 730 FRDPASGNIGGGQFVSPIRNSTNVGREYGT-PNQGVQYGNQYSSSRPSPSTQLNSNTYCN 789
D + IG P S+ R++G +Q Q GN YS + T CN
Sbjct: 725 -ADVVNTGIGSSGTRDP---SSVQRRDFGLHAHQSGQSGNHYSGG--------GATTSCN 749
Query: 790 SCGGSGHSSTNCP 800
CG SGH S CP
Sbjct: 785 VCGNSGHVSAKCP 749
BLAST of HG10002959 vs. TAIR 10
Match:
AT2G06510.1 (replication protein A 1A )
HSP 1 Score: 697.2 bits (1798), Expect = 1.6e-200
Identity = 355/700 (50.71%), Postives = 480/700 (68.57%), Query Frame = 0
Query: 7 PSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHYQQGML 66
P LT A+ I +P+LQV+++K++ SQ+ ER+R L+SDG Q M+
Sbjct: 2 PVSLTPNAITAI---HDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMV 61
Query: 67 GTQLNELVKSGKLQIGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCERIGDPVSATRSS 126
QLN+ VKSG+ + GSIV+L Y+C+ V+ R +I+V+ ++ I + E IG+P +
Sbjct: 62 AVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNP------T 121
Query: 127 VTGAFSGNLLSTVGGLGASPGSGITGKVNVSSASFEQPKVNQSHVPHVGSYSNPTESGRY 186
+ G T G G P + F +P V ++
Sbjct: 122 IFGETDTEAQKTFSGTGNIPPP--------NRVVFNEPMV------------------QH 181
Query: 187 SASITPPSYSKTDPGTRFNGSSPLTGSYGDQKMAYHNSGSDVPRPPLNAYGRPQPIYQQP 246
S + PP G + T S+ RP + QP Y QP
Sbjct: 182 SVNRAPPR------GVNIQNQANNTPSF---------------RPSV------QPSY-QP 241
Query: 247 PSMYSNRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFD 306
P+ Y N GP+ KNEA R++PI ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFD
Sbjct: 242 PASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFD 301
Query: 307 LLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTS 366
LLD GEIRVTCFN + D+FY+ E GKVY ISKGSLKPAQKN+NHLKN++EIFLE+TS
Sbjct: 302 LLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTS 361
Query: 367 TIQPCFEDDQSIPQQQFHFHQISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKR 426
T++ C ++D SIP+QQF F IS+IE ++N+++DVIGVV+S+NP+ ++RKNG ET +R
Sbjct: 362 TVELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRR 421
Query: 427 SLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTIST 486
L LKD SG++VE+TLWG FC +G++L+ M DS PVLA+K+G+VSDF+GK+VGTIS+
Sbjct: 422 ILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISS 481
Query: 487 SQLFVEPGFPEARTLREWFEKGGRSTPSVSISREV--ASVGRTDVRKTISQIKDERLGTS 546
+QLF+ P FPEA LR WF+ GG+ T S SISR+ V R ++RK +SQIK+E LG S
Sbjct: 482 TQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRS 541
Query: 547 EKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDY 606
+KPDWITV AT+SFIK D+FCYTACP+MIGD+QC+KKVT +G +W CDRC+Q DECDY
Sbjct: 542 DKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDY 601
Query: 607 RYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKF 666
RY+LQ+QIQDHTGLTW+TAFQE GEEIMG PAK+LY +KYE + +E+FAEI+R LF ++
Sbjct: 602 RYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQY 638
Query: 667 IMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLM 705
++KLKIKEE++ DEQRV+ TVVK + +++++ES+++LDL+
Sbjct: 662 MLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLL 638
BLAST of HG10002959 vs. TAIR 10
Match:
AT2G06510.2 (replication protein A 1A )
HSP 1 Score: 689.1 bits (1777), Expect = 4.3e-198
Identity = 347/675 (51.41%), Postives = 470/675 (69.63%), Query Frame = 0
Query: 32 LQVIDLKLVNTSQQSGSERFRLLVSDGTHYQQGMLGTQLNELVKSGKLQIGSIVRLRQYV 91
+ V+++K++ SQ+ ER+R L+SDG Q M+ QLN+ VKSG+ + GSIV+L Y+
Sbjct: 1 MPVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYI 60
Query: 92 CNPVQERLIIIVIELDVIEEMCERIGDPVSATRSSVTGAFSGNLLSTVGGLGASPGSGIT 151
C+ V+ R +I+V+ ++ I + E IG+P ++ G T G G P
Sbjct: 61 CSDVKGRKLIVVLNMETIVQQSETIGNP------TIFGETDTEAQKTFSGTGNIPPP--- 120
Query: 152 GKVNVSSASFEQPKVNQSHVPHVGSYSNPTESGRYSASITPPSYSKTDPGTRFNGSSPLT 211
+ F +P V ++S + PP G + T
Sbjct: 121 -----NRVVFNEPMV------------------QHSVNRAPPR------GVNIQNQANNT 180
Query: 212 GSYGDQKMAYHNSGSDVPRPPLNAYGRPQPIYQQPPSMYSNRGPVAKNEAAPRIMPITAL 271
S+ RP + QP Y QPP+ Y N GP+ KNEA R++PI AL
Sbjct: 181 PSF---------------RPSV------QPSY-QPPASYRNHGPIMKNEAPARVIPIAAL 240
Query: 272 NPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQI 331
NPYQGRW IKARVT+KG++R YNN +GDGKVFSFDLLD GEIRVTCFN + D+FY+
Sbjct: 241 NPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVT 300
Query: 332 ESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQISEI 391
E GKVY ISKGSLKPAQKN+NHLKN++EIFLE+TST++ C ++D SIP+QQF F IS+I
Sbjct: 301 EVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDI 360
Query: 392 EGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEG 451
E ++N+++DVIGVV+S+NP+ ++RKNG ET +R L LKD SG++VE+TLWG FC +G
Sbjct: 361 ENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDG 420
Query: 452 QRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPGFPEARTLREWFEKGGRS 511
++L+ M DS PVLA+K+G+VSDF+GK+VGTIS++QLF+ P FPEA LR WF+ GG+
Sbjct: 421 RQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKD 480
Query: 512 TPSVSISREV--ASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDNFCYTAC 571
T S SISR+ V R ++RK +SQIK+E LG S+KPDWITV AT+SFIK D+FCYTAC
Sbjct: 481 TASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTAC 540
Query: 572 PIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGE 631
P+MIGD+QC+KKVT +G +W CDRC+Q DECDYRY+LQ+QIQDHTGLTW+TAFQE GE
Sbjct: 541 PLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGE 600
Query: 632 EIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAE 691
EIMG PAK+LY +KYE + +E+FAEI+R LF ++++KLKIKEE++ DEQRV+ TVVK +
Sbjct: 601 EIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVD 615
Query: 692 SIDFSTESRFLLDLM 705
+++++ES+++LDL+
Sbjct: 661 KVNYTSESKYMLDLL 615
BLAST of HG10002959 vs. TAIR 10
Match:
AT5G08020.1 (RPA70-kDa subunit B )
HSP 1 Score: 300.4 bits (768), Expect = 4.3e-81
Identity = 166/464 (35.78%), Postives = 261/464 (56.25%), Query Frame = 0
Query: 252 NRGPVAKNEAAPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAY 311
N P A+ R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D
Sbjct: 144 NAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEE 203
Query: 312 RGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYEIFLENTSTIQPC 371
+I+ T FN A +FY++ E GKVY+IS+GSLK A K + ++NDYE+ L S ++
Sbjct: 204 GTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEA 263
Query: 372 FEDDQSIPQQQFHFHQISEI-EGMDSNSVVDVIGVVSSINPATSLMRKNGTE-TQKRSLQ 431
++ P+ +F+F I E+ ++ ++DVIGVV S++P S+ RKN E KR +
Sbjct: 264 SNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDIT 323
Query: 432 LKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQL 491
L D + ++V ++LW + GQ L +M D+ PV+A+KS +V F G ++ TIS S +
Sbjct: 324 LADETKKTVVVSLWNDLATGIGQELLDMADN--HPVIAIKSLKVGAFQGVSLSTISRSNV 383
Query: 492 FVEPGFPEARTLREWFEKGGRSTPSVSISREVASVGRTDVRKT------ISQIKDERLGT 551
+ P PEA L+ W++ G+ T +I ++S R +S I
Sbjct: 384 VINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLG 443
Query: 552 SEKPDWITVSATVSFIKVD-NFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDEC 611
EKP + + A +SFIK D Y AC + C+KKVT D + C+ C + EC
Sbjct: 444 EEKPVFFSTRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCESCQKKDQEC 503
Query: 612 DYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFT 671
RYI+ +++ D TG TW++AF + E+I+G A L LK EE + +F +++ ++
Sbjct: 504 SLRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWS 563
Query: 672 KFIMKLKIKEETFSDEQRVRSTVVKAESIDFSTESRFLLDLMDK 707
+ ++ + ++ ++ E+R R TV IDF+ E+R LL + K
Sbjct: 564 SHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 599
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008448593.1 | 0.0e+00 | 92.92 | PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo] | [more] |
| XP_004146122.1 | 0.0e+00 | 93.04 | replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus] >KGN55692.1... | [more] |
| KAA0052992.1 | 0.0e+00 | 92.92 | replication protein A 70 kDa DNA-binding subunit A [Cucumis melo var. makuwa] >T... | [more] |
| XP_038903949.1 | 0.0e+00 | 93.03 | replication protein A 70 kDa DNA-binding subunit A-like [Benincasa hispida] | [more] |
| XP_022944134.1 | 0.0e+00 | 88.07 | replication protein A 70 kDa DNA-binding subunit A [Cucurbita moschata] >KAG6596... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9FHJ6 | 1.1e-241 | 54.67 | Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=37... | [more] |
| F4JSG3 | 7.1e-230 | 54.98 | Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=37... | [more] |
| Q9SKI4 | 2.2e-199 | 50.71 | Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=37... | [more] |
| Q65XV7 | 3.3e-187 | 45.07 | Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japoni... | [more] |
| Q6YZ49 | 1.1e-179 | 47.27 | Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CJS6 | 0.0e+00 | 92.92 | Replication protein A subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A0A0L503 | 0.0e+00 | 93.04 | Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005560 PE=3 SV... | [more] |
| A0A1S3BKX8 | 0.0e+00 | 92.92 | Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103490723 PE=3 SV=1 | [more] |
| A0A6J1FW46 | 0.0e+00 | 88.07 | Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111448678 PE=3... | [more] |
| A0A6J1KSC4 | 0.0e+00 | 87.20 | Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111498272 PE=3 S... | [more] |
