HG10002908 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002908
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein MID1-COMPLEMENTING ACTIVITY 1
Location	Chr11: 15306380 .. 15310747 (-)
RNA-Seq Expression	HG10002908
Synteny	HG10002908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGTGGGAAACGCTTGGGGAGATTGCAAATGTGGCCCAGTTAACGGGCATTGATGCAGTTCGTTTGATTTCCATGATAGTGAAATCTGCGAGCACTGCACGAATGCACAAAAAGAACTGCAGGCAATTTGCTCAGCACCTGAAGTTGATTGGGAACCTGCTGGAGCAGCTAAGATCTCGAGGCTTAAGAGGTATTCTGAGACTCGGGAGCCTCTGGAGCAGCTTGAAGAGGCTTTAAGAAGGTCGTATATTTTGGTCAACAGCTGCCAGGACCGCAGCTATCTCTATTTGCTCGCAATGGGTTGGAACCTGATATACCAATTCAGGCCAGCCCAAATGAAATTGACAGATATCTGCGCCTGGTCCATCTGATTACACTCGTTGACAATGCTCGAGTCAGGGTATGTATTTGATTTTGTTTATTTTTTTTCCCAAGTGTTATTATTTATTTGTTTATTTGCAGAATAGGGTCTTCAAAGATGCGTTTTTCCCATGCATGTTGACTTTCTGGATCTTTCATCTACTCTCATCCTTAACAAAGGGGGAACTTAAAAATATCACAGCTTAAAATAAAGTAAAAATGGAAATATCTGCTAGATGGTTGTGAACTTTGGAAAATAAAACCTATCATTGAAGAATAACCATATGGAAATCAAGTACTGCTGTATACTTATCAGTTGAATTTGATTAGTTCATCAAACTTGCTTCCAGGTGCTTATTTGAAAATTGAAATTGATCAAGGTTTTTTCATAGAACTTCTTGACTGATGGTTTTGTATTGCTTGAGACACACATTGTGTCTTCACTTATTCAATAACGTAATCTGATTAACTTCAAATTCTCAGGAGAGATTGGAAGACATTGAGAAGGATCAGCGTGAATATACTTTGGATGATGATGACAAAAGGATTCATGAAGTAATTCTGAACCCGGAACCTTCGAAAGATGAGGCAATGGTGTTGAAGAAATCCCTTTCCTGTTCATATCCAAACTTGCCGTTTAACAAAGCTCTACAAAAAGAAAATGAAAAGCTTCAGCTAGAACTACAACGGTCTCAAGCTAATCTGAATGTGGGTGAATGTGAGGTTATTCAACGTTTGATAGATGTCACTGAATCTGTAGCTGCAACTTCTCTTCCTGAGAAGAATTCACCTGAAAAATCCCATAAAGTAGTGGAAAATACATATGTGGATGCCAATAACGGACATTCATCTGATGAAAATTTCTATAAGAATACGATGTCGCGGACAACCTCAAGGTCTGCTATGTTCTGTTTTCAGCATTCCAATAACAAGGTTCTAAATCATAATCGTGAAACAAAGGATCACCATGGAGTTACTCTTGCAATTTTAAACTAAAAAAGCGAAGATCCTAAATAGTTTGACTTTGAGCGTTCTGTAAAATTTCCAAATTATGAAGATTGTTTTGAAAACTGTTTTTAGTAACTGTTCCGCCAACCAAGTTTTCTCTGCATAAAAAAAGTATTCTTATTATTTGTTTAAAAATATAAGACCTTTTAAACACTACTTCCAAATTGCCCCCAAAATCTCTCTATCATAGAATGTACAACCACTTCCGTAGGCATGTCATATATTATCAGAGGGGATCGTTCATCGAGCTTGATATTGATTTTTTTTTTCTTTGTGTGCAGAAAAAGTTCTTCCGTATCATCAGGACATGATCTGCTCTCGACTAGGGGTTCTGATCGGTATGGTGAATGGCACACTGACTTACTGGATTGTTGTTCAGAACTTTCTCTGTGTATGTTATCCTCTTCACTTCTAATTTTAAAGGTCAATTCAAATCGGGTTCTAAAGGCAAAGGGCTGGTTCGCTAGGCATAATTTATGCTTATTCAATTGGTATTATGCATGACAGAATTGATGATTTTGACATCGAAGGCTCAAGAGCTTGAACTACGTTTTTCAGCTTTTATTAAATATTTAAATTTGATAGACTGAGACTAGCAGACTGACGGTGATTGAAAATTCTGTTTTCTTTAATCGCAATGTGTCAGTGCAAGTAACACTACTTCTTTTCTGTTTCCAGGTCTTAAGACTTTTTTCTACCCTTGTGGGACTTTATCAAGGATTTCTACGGTTGCAACTAATAGGCATACATGTAAGTTAGCTTCGTGTCCTCAGATTTCCATAACGAATTAGAACTAGAACAAAATGTCCTATACAAATTTATTTATATTCACAACTATTACTTTCTGTTTCTGCCTTTCTCTGAAATAATCTATTTGACTTAACCATCAGCACCAGCAGAAGCATGTAATGATTTGATGGCATATACATTGATACTATCGTGCTGTTGCTATACTTGCTGTGTTAGAAGAAAGCTTCGCAAGATGTTAAACATCACGGTAGTTCCCTTTTCTGCCTGATTAATTAATCCTCTGTTATATTATATTGCCGGCTCACTTGCATATTAGAGAAATGTTTCTCTTGTTTTGATCCTTCTTCCATTCTAGAAACCCTGGTGATTGATTGTTCCTGTAGACACAACACATAGATTAGGCAGTTAACATTATATTTCTGGAGATCAAACAATGCAGATATGCAGCAATTATGCTTGACCAATTGCTGTGAGATGTCCATTTTCCCCACGGGACTGGGGCTCTGTGGGGACCCGCCCCGCTCGGGGCGGGGAATCCCTGATTACACGGGAAATGGGGGAGGGAGCGGGAAGAATTTACTCCCCGTTGACCAAACGGGGACGGGGAATGTCTCCGACCCGGCCCCGCCATGTACCGCCCTATATATATATATATACTTCTAAAAAATTATAATTTTTAACAATTAGCCTTTTCTTAATTCTCATCATAATTTTTTCATACTTTAATGCATTTCTAAAATAGAGATGTTAGACATGTTGAATGTTTATCACTTTTAAGACATGTATATTGTAATGTTTAAGTTGAAGTTAGCTATTAATATTTTAATTTTTAGAAATAAGGAGATAAATATTTTAATTATATCTTTGCATATAATATATTTTTATTTTTGTAAGAAAATTTTATAGTGTTTTATTTAAATAGAAATGTATCGGAATGACAAATTTATATAGAAAGTTTTAAAAATTTTATATCGTTGAGAATAAATTAAAAAAACTTGTTAAAAAATAAATAAATTAAGAATTTCTTTTTCTTTTTCTGGGAAACCCGATCCCCGCGGGGACTTTCGCTGGGATGGAGATTGAAATAGGGGCTTCCCTGTTCCCATCCCTGCCGTGTGGACATCTCTAATTGTTGCCTATTGTAATCGTGTATTTAATGGAGATTGAAATAGGGGCTTCCCTGTTCCCATCCCTGCCGTGTGGACATCTCTAATTGTTGCCTATTGTAATCGTGTATTTACAATGTGAATAAACTGGACCCTTAAATCGTCAATGAACAAGATTATTTGTCCAAATACTATCTCCATAAAGATCTGAATGGAAAATCTGTGGCAAATTGGCAGGGAGGTTTTGTTGATGACTTTCTCTCCCATCTTATGTGCTGCTGCTGTGCCCTGGTCCAAGAATGGCGAGAAGTTGAGATACGCGGGGTTTACGGTATGTACTTCAACCCTCTCCAACAAAAATTCTCTTTTACATTGCAAAAAAAACCTTTATCTTATTATTGATTCCATTAAACTTACTGCAATACAACAACTTAAACTAAACTTTTGGATTGATTTGTGATTTAACTTGATATCAGAGCAGGAGGTGATGTGTTCGAATGACTTGTAATGTCATTTACTCCCCACCTAATATTGATTTCTACTTATTGGACCTTTTATAACTTAAACTTTTGAGTTGATTGGTGATTTCATTTTATATACCATTTACATTTTTGGATACGGAAACTTCAGTTAATTTTGGATGAGTATCTGGTGTGTTTAATATATAAAAATAATCGTGCAGGTCCCGAAAAGACGAAAACAAGCCCCCCACCCTCCCAATACATGGAATCTTAAAAGTACAGTCGACACATATTCAACCATCCGTAGACTCGGAATAATTTCGATTGATGATAGAGTTATGTAATGGATTCAGGTAAAGTGTTGGATGTAACTGGAAGCTTACATTGGCATGCTTTTATGTTATTACTTACCATACACACAACCCCTTGCCTTTTGTATAGTTGACTCTGCACTTGCTGTATCATAGATTTGTTTTTAAACCTTTTACAGTGTTTCGAGTTTCTTACTCCCATGTTTGTGCCTGAGTTCAGCTGTAGATTTTGACCAAAGTTAACAATTGCATTTTAATGGTCAGCTAGTTTCCTTCAGCTTAGTTTCTTGTTTTTGGTTTTTTGTGGTTTTTTTCCCCTCTTAGGACTTCAAAGTTGCATTTTACAGTTTGGAGAACTATTGTTGA

mRNA sequence

ATGTCGTCGTGGGAAACGCTTGGGGAGATTGCAAATGTGGCCCAGTTAACGGGCATTGATGCAGTTCGTTTGATTTCCATGATAGTGAAATCTGCGAGCACTGCACGAATGCACAAAAAGAACTGCAGGCAATTTGCTCAGCACCTGAAGTTGATTGGGAACCTGCTGGAGCAGCTAAGATCTCGAGGCTTAAGAGGACCGCAGCTATCTCTATTTGCTCGCAATGGGTTGGAACCTGATATACCAATTCAGGCCAGCCCAAATGAAATTGACAGATATCTGCGCCTGGTCCATCTGATTACACTCGTTGACAATGCTCGAGTCAGGGAGAGATTGGAAGACATTGAGAAGGATCAGCGTGAATATACTTTGGATGATGATGACAAAAGGATTCATGAAGTAATTCTGAACCCGGAACCTTCGAAAGATGAGGCAATGGTGTTGAAGAAATCCCTTTCCTGTTCATATCCAAACTTGCCGTTTAACAAAGCTCTACAAAAAGAAAATGAAAAGCTTCAGCTAGAACTACAACGGTCTCAAGCTAATCTGAATGTGGGTGAATGTGAGGTTATTCAACGTTTGATAGATGTCACTGAATCTGTAGCTGCAACTTCTCTTCCTGAGAAGAATTCACCTGAAAAATCCCATAAAGTAGTGGAAAATACATATGTGGATGCCAATAACGGACATTCATCTGATGAAAATTTCTATAAGAATACGATGTCGCGGACAACCTCAAGAAAAAGTTCTTCCGTATCATCAGGACATGATCTGCTCTCGACTAGGGGTTCTGATCGGGAGGTTTTGTTGATGACTTTCTCTCCCATCTTATGTGCTGCTGCTGTGCCCTGGTCCAAGAATGGCGAGAAGTTGAGATACGCGGGGTTTACGGACTTCAAAGTTGCATTTTACAGTTTGGAGAACTATTGTTGA

Coding sequence (CDS)

ATGTCGTCGTGGGAAACGCTTGGGGAGATTGCAAATGTGGCCCAGTTAACGGGCATTGATGCAGTTCGTTTGATTTCCATGATAGTGAAATCTGCGAGCACTGCACGAATGCACAAAAAGAACTGCAGGCAATTTGCTCAGCACCTGAAGTTGATTGGGAACCTGCTGGAGCAGCTAAGATCTCGAGGCTTAAGAGGACCGCAGCTATCTCTATTTGCTCGCAATGGGTTGGAACCTGATATACCAATTCAGGCCAGCCCAAATGAAATTGACAGATATCTGCGCCTGGTCCATCTGATTACACTCGTTGACAATGCTCGAGTCAGGGAGAGATTGGAAGACATTGAGAAGGATCAGCGTGAATATACTTTGGATGATGATGACAAAAGGATTCATGAAGTAATTCTGAACCCGGAACCTTCGAAAGATGAGGCAATGGTGTTGAAGAAATCCCTTTCCTGTTCATATCCAAACTTGCCGTTTAACAAAGCTCTACAAAAAGAAAATGAAAAGCTTCAGCTAGAACTACAACGGTCTCAAGCTAATCTGAATGTGGGTGAATGTGAGGTTATTCAACGTTTGATAGATGTCACTGAATCTGTAGCTGCAACTTCTCTTCCTGAGAAGAATTCACCTGAAAAATCCCATAAAGTAGTGGAAAATACATATGTGGATGCCAATAACGGACATTCATCTGATGAAAATTTCTATAAGAATACGATGTCGCGGACAACCTCAAGAAAAAGTTCTTCCGTATCATCAGGACATGATCTGCTCTCGACTAGGGGTTCTGATCGGGAGGTTTTGTTGATGACTTTCTCTCCCATCTTATGTGCTGCTGCTGTGCCCTGGTCCAAGAATGGCGAGAAGTTGAGATACGCGGGGTTTACGGACTTCAAAGTTGCATTTTACAGTTTGGAGAACTATTGTTGA

Protein sequence

MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRSRGLRGPQLSLFARNGLEPDIPIQASPNEIDRYLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPEKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDREVLLMTFSPILCAAAVPWSKNGEKLRYAGFTDFKVAFYSLENYC

Homology

[Close]

BLAST of HG10002908 vs. NCBI nr
Match: KAA0052946.1 (protein MID1-COMPLEMENTING ACTIVITY 1 [Cucumis melo var. makuwa] >TYK11402.1 protein MID1-COMPLEMENTING ACTIVITY 1 [Cucumis melo var. makuwa])

HSP 1 Score: 455.3 bits (1170), Expect = 4.2e-124
Identity = 266/368 (72.28%), Postives = 273/368 (74.18%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRL+DVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLLDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR------ 298
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR      
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDRYGEWHT 300

[Close]

BLAST of HG10002908 vs. NCBI nr
Match: XP_038905240.1 (protein MID1-COMPLEMENTING ACTIVITY 1-like [Benincasa hispida] >XP_038905241.1 protein MID1-COMPLEMENTING ACTIVITY 1-like [Benincasa hispida] >XP_038905242.1 protein MID1-COMPLEMENTING ACTIVITY 1-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.2e-113
Identity = 240/294 (81.63%), Postives = 246/294 (83.67%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAA+SLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAASSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVENTYVDANNGHSSDENFYKNT +RTTSRK SSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVENTYVDANNGHSSDENFYKNTDARTTSRK-SSVSSGHDLLSTRGSDR 292

[Close]

BLAST of HG10002908 vs. NCBI nr
Match: XP_004146155.1 (protein MID1-COMPLEMENTING ACTIVITY 1 isoform X2 [Cucumis sativus] >KGN55644.1 hypothetical protein Csa_011533 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-113
Identity = 239/294 (81.29%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. NCBI nr
Match: XP_031738428.1 (protein MID1-COMPLEMENTING ACTIVITY 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-113
Identity = 239/294 (81.29%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. NCBI nr
Match: XP_008448524.1 (PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 2.6e-113
Identity = 238/294 (80.95%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRL+DVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLLDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. ExPASy Swiss-Prot
Match: B6SJQ0 (Cell number regulator 13 OS=Zea mays OX=4577 GN=CNR13 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-64
Identity = 147/304 (48.36%), Postives = 200/304 (65.79%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           M+SW+ LGE++N+AQLTG+DAV+LIS+IV++ASTAR+HK+NCR+FAQHLKLIG LLEQLR
Sbjct: 1   MASWDNLGELSNIAQLTGLDAVKLISLIVRAASTARLHKRNCRRFAQHLKLIGGLLEQLR 60

Query: 61  SRGLRG--------PQLSLFARNGL-------------------EPDIPIQASPNEIDRY 120
              LR          QL    R G                          + + +EID Y
Sbjct: 61  VSELRKYPETREPLEQLEDALRRGYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQSEIDNY 120

Query: 121 LRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLS 180
           LRLV LITLVDNAR+R+RLE IE+DQ EY+ D++DK++ + +LNP+P  +  +VLKK+LS
Sbjct: 121 LRLVPLITLVDNARIRDRLEYIERDQCEYSFDEEDKKVQDALLNPDPCTNPTIVLKKTLS 180

Query: 181 CSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEK---- 240
           CSYPNLPFN+AL+KE+EKLQ+ELQRSQ+N+++G CEVIQ L+ VT++V +T +PEK    
Sbjct: 181 CSYPNLPFNEALRKESEKLQVELQRSQSNMDLGSCEVIQHLLGVTKTVEST-IPEKETNV 240

Query: 241 NSPEKSHKVVENTYVDANNGHSSDENF---------YKNTMSRTTSRKSSSVSSGHDLLS 265
            +PEK       +  +       D+++          K   + +T R SS V  GHDL+S
Sbjct: 241 KAPEKKGSNYSESKGETAKSFDDDDDYPKKQNGDYPKKQKDTCSTQRCSSQVPYGHDLVS 300

[Close]

BLAST of HG10002908 vs. ExPASy Swiss-Prot
Match: Q8L7E9 (Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MCA1 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.7e-64
Identity = 147/293 (50.17%), Postives = 195/293 (66.55%), Query Frame = 0


Query: 3   SWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRSR 62
           SW+ LGEIA+VAQLTG+DAV+LI +IVK+A+TA MHKKNCRQFAQHLKLIGNLLEQL+  
Sbjct: 4   SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63

Query: 63  GLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYLR 122
            ++    +     GLE  +                             +   +EIDR+L+
Sbjct: 64  EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123

Query: 123 LVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSCS 182
           ++ LITLVDNAR+RER E I++DQREYTLD++D+ + +VIL  E +++ A VLKK+LSCS
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183

Query: 183 YPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSL-PEKNSPEK 242
           YPNL F +AL+ ENEKLQ+ELQRSQ + +V +CEVIQRLI VT++ AA     EK   +K
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243

Query: 243 SHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDRE 268
           + K  E +       +S DE+  K + +R  SR +S+VSSGHDLLS R S  +
Sbjct: 244 ASKKSERS-SSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQ 295

[Close]

BLAST of HG10002908 vs. ExPASy Swiss-Prot
Match: Q3EBY6 (Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MCA2 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.4e-55
Identity = 138/290 (47.59%), Postives = 185/290 (63.79%), Query Frame = 0


Query: 2   SSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRS 61
           +SW+ LGEIA+VAQLTGIDA++LI MIV +A+TARMHKKNCRQFA HLKLI NLLEQ+++
Sbjct: 3   NSWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQIKN 62

Query: 62  RGLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYL 121
             +      L    GL+  +                             + + NEID +L
Sbjct: 63  SEMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDLFL 122

Query: 122 RLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEA-MVLKKSLS 181
           ++V LI + DNAR+RERLE IE+DQREYTLD++D+++ +VIL  E +++ A  VLKK+LS
Sbjct: 123 KIVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVLKKTLS 182

Query: 182 CSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPE 241
            SYPN+ F +AL+ E EKLQLELQRS+A  +  +CEVIQRLIDVT++ A     E N  +
Sbjct: 183 RSYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATV---EPNLEK 242

Query: 242 KSHKVVENTYVDANNGHSSDENFYKNTMS-RTTSRKSSSVSSGHDLLSTR 263
              K  E T     +    D+ +  ++ S R  SR +S VSSGH+LLS R
Sbjct: 243 VLTKKEELT-----SSKKRDDLYDTDSSSIRADSRSTSYVSSGHELLSGR 284

[Close]

BLAST of HG10002908 vs. ExPASy TrEMBL
Match: A0A5A7UFF6 (Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00550 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.0e-124
Identity = 266/368 (72.28%), Postives = 273/368 (74.18%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRL+DVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLLDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR------ 298
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR      
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDRYGEWHT 300

[Close]

BLAST of HG10002908 vs. ExPASy TrEMBL
Match: A0A0A0L3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002640 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 7.3e-114
Identity = 239/294 (81.29%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. ExPASy TrEMBL
Match: A0A1S3BKI0 (protein MID1-COMPLEMENTING ACTIVITY 1 OS=Cucumis melo OX=3656 GN=LOC103490676 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.2e-113
Identity = 238/294 (80.95%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRL+DVTESVAATSLPEKNSP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLLDVTESVAATSLPEKNSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           EKSHKVVE TYVDANNG SSDE+FYKNT +RTTSRKSSSVSSGHDLLSTRGSDR
Sbjct: 241 EKSHKVVEKTYVDANNGDSSDEHFYKNTDARTTSRKSSSVSSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. ExPASy TrEMBL
Match: A0A6J1CWA8 (protein MID1-COMPLEMENTING ACTIVITY 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014822 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.9e-110
Identity = 229/294 (77.89%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAM LKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMALKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQA+LNVGECEVIQRLIDVTE+VAA+S+ EK+SP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQAHLNVGECEVIQRLIDVTEAVAASSIHEKSSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           +K+HKVVENTYVDANN HSSDE++YKNT +RTTSRKSSS+SSGHDLLSTRGSDR
Sbjct: 241 DKAHKVVENTYVDANNAHSSDESYYKNTDTRTTSRKSSSISSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. ExPASy TrEMBL
Match: A0A6J1CW21 (protein MID1-COMPLEMENTING ACTIVITY 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014822 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.9e-110
Identity = 229/294 (77.89%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLR 60
           MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQL+
Sbjct: 1   MSSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLK 60

Query: 61  SRGL-RGPQ---------------------------LSLFARNGLEPDIPIQASPNEIDR 120
              L R P+                           L L A  G       + + NEIDR
Sbjct: 61  ISELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAM-GWNIVYQFRKAQNEIDR 120

Query: 121 YLRLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSL 180
           YLRLV LITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAM LKKSL
Sbjct: 121 YLRLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMALKKSL 180

Query: 181 SCSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSP 240
           SCSYPNLPFNKALQKENEKLQLELQRSQA+LNVGECEVIQRLIDVTE+VAA+S+ EK+SP
Sbjct: 181 SCSYPNLPFNKALQKENEKLQLELQRSQAHLNVGECEVIQRLIDVTEAVAASSIHEKSSP 240

Query: 241 EKSHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDR 267
           +K+HKVVENTYVDANN HSSDE++YKNT +RTTSRKSSS+SSGHDLLSTRGSDR
Sbjct: 241 DKAHKVVENTYVDANNAHSSDESYYKNTDTRTTSRKSSSISSGHDLLSTRGSDR 293

[Close]

BLAST of HG10002908 vs. TAIR 10
Match: AT4G35920.1 (PLAC8 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.7e-65
Identity = 147/293 (50.17%), Postives = 195/293 (66.55%), Query Frame = 0


Query: 3   SWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRSR 62
           SW+ LGEIA+VAQLTG+DAV+LI +IVK+A+TA MHKKNCRQFAQHLKLIGNLLEQL+  
Sbjct: 4   SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63

Query: 63  GLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYLR 122
            ++    +     GLE  +                             +   +EIDR+L+
Sbjct: 64  EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123

Query: 123 LVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSCS 182
           ++ LITLVDNAR+RER E I++DQREYTLD++D+ + +VIL  E +++ A VLKK+LSCS
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183

Query: 183 YPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSL-PEKNSPEK 242
           YPNL F +AL+ ENEKLQ+ELQRSQ + +V +CEVIQRLI VT++ AA     EK   +K
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243

Query: 243 SHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDRE 268
           + K  E +       +S DE+  K + +R  SR +S+VSSGHDLLS R S  +
Sbjct: 244 ASKKSERS-SSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQ 295

[Close]

BLAST of HG10002908 vs. TAIR 10
Match: AT4G35920.3 (PLAC8 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.7e-65
Identity = 147/293 (50.17%), Postives = 195/293 (66.55%), Query Frame = 0


Query: 3   SWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRSR 62
           SW+ LGEIA+VAQLTG+DAV+LI +IVK+A+TA MHKKNCRQFAQHLKLIGNLLEQL+  
Sbjct: 4   SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63

Query: 63  GLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYLR 122
            ++    +     GLE  +                             +   +EIDR+L+
Sbjct: 64  EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123

Query: 123 LVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSCS 182
           ++ LITLVDNAR+RER E I++DQREYTLD++D+ + +VIL  E +++ A VLKK+LSCS
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183

Query: 183 YPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSL-PEKNSPEK 242
           YPNL F +AL+ ENEKLQ+ELQRSQ + +V +CEVIQRLI VT++ AA     EK   +K
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243

Query: 243 SHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDRE 268
           + K  E +       +S DE+  K + +R  SR +S+VSSGHDLLS R S  +
Sbjct: 244 ASKKSERS-SSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQ 295

[Close]

BLAST of HG10002908 vs. TAIR 10
Match: AT4G35920.2 (PLAC8 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.7e-65
Identity = 147/293 (50.17%), Postives = 195/293 (66.55%), Query Frame = 0


Query: 3   SWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRSR 62
           SW+ LGEIA+VAQLTG+DAV+LI +IVK+A+TA MHKKNCRQFAQHLKLIGNLLEQL+  
Sbjct: 4   SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63

Query: 63  GLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYLR 122
            ++    +     GLE  +                             +   +EIDR+L+
Sbjct: 64  EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123

Query: 123 LVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSCS 182
           ++ LITLVDNAR+RER E I++DQREYTLD++D+ + +VIL  E +++ A VLKK+LSCS
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183

Query: 183 YPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSL-PEKNSPEK 242
           YPNL F +AL+ ENEKLQ+ELQRSQ + +V +CEVIQRLI VT++ AA     EK   +K
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243

Query: 243 SHKVVENTYVDANNGHSSDENFYKNTMSRTTSRKSSSVSSGHDLLSTRGSDRE 268
           + K  E +       +S DE+  K + +R  SR +S+VSSGHDLLS R S  +
Sbjct: 244 ASKKSERS-SSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQ 295

[Close]

BLAST of HG10002908 vs. TAIR 10
Match: AT2G17780.1 (PLAC8 family protein )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 138/290 (47.59%), Postives = 185/290 (63.79%), Query Frame = 0


Query: 2   SSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRS 61
           +SW+ LGEIA+VAQLTGIDA++LI MIV +A+TARMHKKNCRQFA HLKLI NLLEQ+++
Sbjct: 3   NSWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQIKN 62

Query: 62  RGLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYL 121
             +      L    GL+  +                             + + NEID +L
Sbjct: 63  SEMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDLFL 122

Query: 122 RLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEA-MVLKKSLS 181
           ++V LI + DNAR+RERLE IE+DQREYTLD++D+++ +VIL  E +++ A  VLKK+LS
Sbjct: 123 KIVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVLKKTLS 182

Query: 182 CSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPE 241
            SYPN+ F +AL+ E EKLQLELQRS+A  +  +CEVIQRLIDVT++ A     E N  +
Sbjct: 183 RSYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATV---EPNLEK 242

Query: 242 KSHKVVENTYVDANNGHSSDENFYKNTMS-RTTSRKSSSVSSGHDLLSTR 263
              K  E T     +    D+ +  ++ S R  SR +S VSSGH+LLS R
Sbjct: 243 VLTKKEELT-----SSKKRDDLYDTDSSSIRADSRSTSYVSSGHELLSGR 284

[Close]

BLAST of HG10002908 vs. TAIR 10
Match: AT2G17780.2 (PLAC8 family protein )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 138/290 (47.59%), Postives = 185/290 (63.79%), Query Frame = 0


Query: 2   SSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLRS 61
           +SW+ LGEIA+VAQLTGIDA++LI MIV +A+TARMHKKNCRQFA HLKLI NLLEQ+++
Sbjct: 3   NSWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQIKN 62

Query: 62  RGLRGPQLSLFARNGLEPDI---------------------------PIQASPNEIDRYL 121
             +      L    GL+  +                             + + NEID +L
Sbjct: 63  SEMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDLFL 122

Query: 122 RLVHLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEA-MVLKKSLS 181
           ++V LI + DNAR+RERLE IE+DQREYTLD++D+++ +VIL  E +++ A  VLKK+LS
Sbjct: 123 KIVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVLKKTLS 182

Query: 182 CSYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPE 241
            SYPN+ F +AL+ E EKLQLELQRS+A  +  +CEVIQRLIDVT++ A     E N  +
Sbjct: 183 RSYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATV---EPNLEK 242

Query: 242 KSHKVVENTYVDANNGHSSDENFYKNTMS-RTTSRKSSSVSSGHDLLSTR 263
              K  E T     +    D+ +  ++ S R  SR +S VSSGH+LLS R
Sbjct: 243 VLTKKEELT-----SSKKRDDLYDTDSSSIRADSRSTSYVSSGHELLSGR 284

The following BLAST results are available for this feature:

BLAST of HG10002908 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052946.1	4.2e-124	72.28	protein MID1-COMPLEMENTING ACTIVITY 1 [Cucumis melo var. makuwa] >TYK11402.1 pro...	[more]
XP_038905240.1	1.2e-113	81.63	protein MID1-COMPLEMENTING ACTIVITY 1-like [Benincasa hispida] >XP_038905241.1 p...	[more]
XP_004146155.1	1.5e-113	81.29	protein MID1-COMPLEMENTING ACTIVITY 1 isoform X2 [Cucumis sativus] >KGN55644.1 h...	[more]
XP_031738428.1	1.5e-113	81.29	protein MID1-COMPLEMENTING ACTIVITY 1 isoform X1 [Cucumis sativus]	[more]
XP_008448524.1	2.6e-113	80.95	PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Cucumis melo]	[more]

BLAST of HG10002908 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6SJQ0	3.0e-64	48.36	Cell number regulator 13 OS=Zea mays OX=4577 GN=CNR13 PE=2 SV=1	[more]
Q8L7E9	6.7e-64	50.17	Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MCA1 PE...	[more]
Q3EBY6	7.4e-55	47.59	Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MCA2 PE...	[more]

BLAST of HG10002908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFF6	2.0e-124	72.28	Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L3N0	7.3e-114	81.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002640 PE=4 SV=1	[more]
A0A1S3BKI0	1.2e-113	80.95	protein MID1-COMPLEMENTING ACTIVITY 1 OS=Cucumis melo OX=3656 GN=LOC103490676 PE...	[more]
A0A6J1CWA8	4.9e-110	77.89	protein MID1-COMPLEMENTING ACTIVITY 1-like isoform X2 OS=Momordica charantia OX=...	[more]
A0A6J1CW21	4.9e-110	77.89	protein MID1-COMPLEMENTING ACTIVITY 1-like isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of HG10002908 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35920.1	4.7e-65	50.17	PLAC8 family protein	[more]
AT4G35920.3	4.7e-65	50.17	PLAC8 family protein	[more]
AT4G35920.2	4.7e-65	50.17	PLAC8 family protein	[more]
AT2G17780.1	5.3e-56	47.59	PLAC8 family protein	[more]
AT2G17780.2	5.3e-56	47.59	PLAC8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..189
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..258
None	No IPR available	PANTHER	PTHR46604:SF10	PROTEIN MID1-COMPLEMENTING ACTIVITY 1-LIKE	coord: 1..64
None	No IPR available	PANTHER	PTHR46604:SF10	PROTEIN MID1-COMPLEMENTING ACTIVITY 1-LIKE	coord: 86..267
None	No IPR available	PANTHER	PTHR46604	PROTEIN MID1-COMPLEMENTING ACTIVITY 1	coord: 86..267
None	No IPR available	PANTHER	PTHR46604	PROTEIN MID1-COMPLEMENTING ACTIVITY 1	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002908.1	HG10002908.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway