HG10002873 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002873
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2H2-type domain-containing protein
Location	Chr11: 14933627 .. 14934339 (+)
RNA-Seq Expression	HG10002873
Synteny	HG10002873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAACACCAACGCCAATGCCAATGACAATACGGTTTCGGAGACCTCTCCCGACCAACGCCACGGCGGAGAAAGGTCTCCAATGGCATCTTCTCCACCACCATCGGCTCGAAATGACGACTTTAAACCTACTCCCAACGTCGTCATTGAACTCTCGTCCTCCGTAGTAGTGGCGGCCCCAGAAAGAAAGCAACAACAGGCGACGTCAGACGGCGCCAAACTGTAGATGCCACCCTGCTCGACGTCGGAACGTCATCACACGATCATGTCGGAGGCAGTTCCGATATCGAGCAGGGGAAAAAGAGAGGGCGAGGAGATGGGGGGGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAGGGAGAGCTGACGGAGGTTCCAAAAGGTGAGCCAAGATGTGCAACTTGCAATAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGACACTTGAGGTCTCACCCGGAACGAACCTACCGTGGGGCTCTTCCACCGCCAACCGCCGCCGAACTCGATATTCGCCGATGTCAGCAGCAGCTCGCTTCCACTTTGCTCACAGTGGCTCAGCAAGTGGCAACGTCCAGAAGAGGGCTGAATATTGATCTCAAACAACCCTCGGCTGCTGACGACGGTGACTCGCCAGAGAAGACCGGCAGTGTTGGGTTCGATTTGAACGTCGAGCCACCGCGGGAGAGTGACGACGAGAAGTGA

mRNA sequence

ATGGAGAAGAACACCAACGCCAATGCCAATGACAATACGGTTTCGGAGACCTCTCCCGACCAACGCCACGGCGGAGAAAGTAGTGGCGGCCCCAGAAAGAAAGCAACAACAGGCGACGTCAGACGGCGCCAAACTGTAGATGCCACCCTGCTCGACGTCGGAACGTCATCACACGATCATGTCGGAGGCAGTTCCGATATCGAGCAGGGGAAAAAGAGAGGGCGAGGAGATGGGGGGGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAGGGAGAGCTGACGGAGGTTCCAAAAGGTGAGCCAAGATGTGCAACTTGCAATAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGACACTTGAGGTCTCACCCGGAACGAACCTACCGTGGGGCTCTTCCACCGCCAACCGCCGCCGAACTCGATATTCGCCGATGTCAGCAGCAGCTCGCTTCCACTTTGCTCACAGTGGCTCAGCAAGTGGCAACGTCCAGAAGAGGGCTGAATATTGATCTCAAACAACCCTCGGCTGCTGACGACGGTGACTCGCCAGAGAAGACCGGCAGTGTTGGGTTCGATTTGAACGTCGAGCCACCGCGGGAGAGTGACGACGAGAAGTGA

Coding sequence (CDS)

ATGGAGAAGAACACCAACGCCAATGCCAATGACAATACGGTTTCGGAGACCTCTCCCGACCAACGCCACGGCGGAGAAAGTAGTGGCGGCCCCAGAAAGAAAGCAACAACAGGCGACGTCAGACGGCGCCAAACTGTAGATGCCACCCTGCTCGACGTCGGAACGTCATCACACGATCATGTCGGAGGCAGTTCCGATATCGAGCAGGGGAAAAAGAGAGGGCGAGGAGATGGGGGGGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAGGGAGAGCTGACGGAGGTTCCAAAAGGTGAGCCAAGATGTGCAACTTGCAATAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGACACTTGAGGTCTCACCCGGAACGAACCTACCGTGGGGCTCTTCCACCGCCAACCGCCGCCGAACTCGATATTCGCCGATGTCAGCAGCAGCTCGCTTCCACTTTGCTCACAGTGGCTCAGCAAGTGGCAACGTCCAGAAGAGGGCTGAATATTGATCTCAAACAACCCTCGGCTGCTGACGACGGTGACTCGCCAGAGAAGACCGGCAGTGTTGGGTTCGATTTGAACGTCGAGCCACCGCGGGAGAGTGACGACGAGAAGTGA

Protein sequence

MEKNTNANANDNTVSETSPDQRHGGESSGGPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDDEK

Homology

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BLAST of HG10002873 vs. NCBI nr
Match: XP_008449156.1 (PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo] >KAA0052913.1 zinc finger family protein [Cucumis melo var. makuwa] >TYK11366.1 zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-82
Identity = 176/243 (72.43%), Postives = 184/243 (75.72%), Query Frame = 0


Query: 1   MEKNTNANANDN------TVSETSPDQRHGGESSG------------------------- 60
           MEKNTN NAN N       VSETSPDQRHGGE S                          
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  ------GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQ 120
                    + AT GDVRRRQ+VDA + DVGTSSH+HVGGSSD E GKKRGRGDGGEQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDA-MFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQ 120

Query: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
           QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI
Sbjct: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180

Query: 181 RRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESD 207
           RRCQQQLASTLLTVAQQVA +RRGL+IDL QPS ADDGDSP+ T   GFDLN+EPP ESD
Sbjct: 181 RRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESD 240

[Close]

BLAST of HG10002873 vs. NCBI nr
Match: XP_011652703.1 (uncharacterized protein LOC105435052 [Cucumis sativus] >KGN55600.1 hypothetical protein Csa_009908 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 9.5e-80
Identity = 172/243 (70.78%), Postives = 182/243 (74.90%), Query Frame = 0


Query: 1   MEKNTNANANDN------TVSETSPDQRHGGESSG------------------------- 60
           MEKNTN NAN N       VSETSPDQRH  E S                          
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  ------GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQ 120
                    +  T GDVRRRQ+V+A + DVGTSSH+HVGGSSD+E GKKRGRGDGGEQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNA-MFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQ 120

Query: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
           QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI
Sbjct: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180

Query: 181 RRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESD 207
           RRCQQQLASTLLTVAQQV+ SRRGL+IDL QPS ADDGDSP+ T   GFDLN+EPP ESD
Sbjct: 181 RRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESD 240

[Close]

BLAST of HG10002873 vs. NCBI nr
Match: XP_038876670.1 (uncharacterized protein LOC120069065 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 169/242 (69.83%), Postives = 182/242 (75.21%), Query Frame = 0


Query: 1   MEKNT----NANANDNTVSETSPDQRHGGESSG--------------------------- 60
           MEKNT    NANAN NTVSETSPDQ H GE +                            
Sbjct: 1   MEKNTNTNANANANTNTVSETSPDQHHDGERTPITATSPLPPARNDNVNNPTPTVVIELS 60

Query: 61  -----GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQQ 120
                   + ATTGD RRRQ VDATLLDV TSSH+++GGSS+IEQGKKRG+GDG EQQQQ
Sbjct: 61  SSIVVAAPESATTGDSRRRQIVDATLLDVETSSHEYIGGSSNIEQGKKRGKGDGEEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           V+ AKKKGELTEVPKGEP+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 
Sbjct: 121 VRVAKKKGELTEVPKGEPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI- 180

Query: 181 RCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDD 207
              QQLASTLLTVAQQVA SRRGL+IDL QPS ADDGD PEKTG VGFDLN++PP +SDD
Sbjct: 181 --HQQLASTLLTVAQQVAASRRGLDIDLNQPSTADDGDLPEKTGGVGFDLNIKPPSDSDD 239

[Close]

BLAST of HG10002873 vs. NCBI nr
Match: XP_023007614.1 (uncharacterized protein LOC111500193 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 4.4e-69
Identity = 155/223 (69.51%), Postives = 168/223 (75.34%), Query Frame = 0


Query: 1   MEKNTNANANDNTVSE-TSPDQRHGGESS-------------GGPRKKATTGDVRRRQTV 60
           MEKNTNANA+ NTV E TSPDQRHGGE S               P               
Sbjct: 1   MEKNTNANADINTVPESTSPDQRHGGERSPMAVSPPPASIDDNNPTPPVINLSSVAPAPE 60

Query: 61  DATLLDVG---TSSHDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPR 120
             T  DVG   +SSH HVGG S+ E GKKRGRGDGGEQQQQVKAAKKKGELTEVPKG+P+
Sbjct: 61  RGTTGDVGVSSSSSHGHVGGGSNTEVGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGDPK 120

Query: 121 CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVAT 180
           CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR CQQQ ASTLLTVAQ VA 
Sbjct: 121 CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRHCQQQFASTLLTVAQGVAA 180

Query: 181 SRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDDEK 207
           SRRGL+IDL QPSAA++  SPEK+G VGFDLNVE P ES++++
Sbjct: 181 SRRGLDIDLNQPSAAEESGSPEKSGGVGFDLNVEQPPESENDE 223

[Close]

BLAST of HG10002873 vs. NCBI nr
Match: XP_022923503.1 (uncharacterized protein LOC111431177 [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-68
Identity = 157/231 (67.97%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 1   MEKNTNANAND--------NTVSE-TSPDQRHGGESS-------------GGPRKKATTG 60
           MEKNTNANAN         NT+ E TSPDQRHG E+S               P       
Sbjct: 1   MEKNTNANANPNINVDADINTIPESTSPDQRHGRETSPMAVSPPPASIDDNNPTPPVINL 60

Query: 61  DVRRRQTVDATLLDVGTSS---HDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKKKGELT 120
                    AT  DVGTSS   H HVGG S+ E GKKRGRGDGGEQQQQVKAAKKKGELT
Sbjct: 61  SSVAPAPERATTGDVGTSSSSTHGHVGGGSNTEVGKKRGRGDGGEQQQQVKAAKKKGELT 120

Query: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180
           EVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR CQQQ ASTLL
Sbjct: 121 EVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRHCQQQFASTLL 180

Query: 181 TVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDDEK 207
           TVAQ VA SRRGL+IDL QPSAA++ +SPEK+G VGFDLNVE P ESD+++
Sbjct: 181 TVAQGVAASRRGLDIDLNQPSAAEESESPEKSGGVGFDLNVEQPPESDNDE 231

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BLAST of HG10002873 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.5e-06
Identity = 34/86 (39.53%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 55  TSSHDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKV 114
           +SS+DH          KKR +          K+A K    K      PK    C  C + 
Sbjct: 33  SSSYDH-------SPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRK 92

Query: 115 FKSWKALFGHLRSHPERTYRGALPPP 137
           F SWKALFGH+R HPER +RG  PPP
Sbjct: 93  FWSWKALFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of HG10002873 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.0e-05
Identity = 20/32 (62.50%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 104 CATCNKVFKSWKALFGHLRSHPERTYRGALPP 136
           C  C K F S KALFGH+R HPER +RG  PP
Sbjct: 67  CTECGKQFGSLKALFGHMRCHPERQWRGINPP 98

[Close]

BLAST of HG10002873 vs. ExPASy TrEMBL
Match: A0A5D3CLS0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00180 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 176/243 (72.43%), Postives = 184/243 (75.72%), Query Frame = 0


Query: 1   MEKNTNANANDN------TVSETSPDQRHGGESSG------------------------- 60
           MEKNTN NAN N       VSETSPDQRHGGE S                          
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  ------GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQ 120
                    + AT GDVRRRQ+VDA + DVGTSSH+HVGGSSD E GKKRGRGDGGEQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDA-MFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQ 120

Query: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
           QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI
Sbjct: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180

Query: 181 RRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESD 207
           RRCQQQLASTLLTVAQQVA +RRGL+IDL QPS ADDGDSP+ T   GFDLN+EPP ESD
Sbjct: 181 RRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESD 240

[Close]

BLAST of HG10002873 vs. ExPASy TrEMBL
Match: A0A1S3BLF2 (uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 176/243 (72.43%), Postives = 184/243 (75.72%), Query Frame = 0


Query: 1   MEKNTNANANDN------TVSETSPDQRHGGESSG------------------------- 60
           MEKNTN NAN N       VSETSPDQRHGGE S                          
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  ------GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQ 120
                    + AT GDVRRRQ+VDA + DVGTSSH+HVGGSSD E GKKRGRGDGGEQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDA-MFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQ 120

Query: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
           QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI
Sbjct: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180

Query: 181 RRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESD 207
           RRCQQQLASTLLTVAQQVA +RRGL+IDL QPS ADDGDSP+ T   GFDLN+EPP ESD
Sbjct: 181 RRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESD 240

[Close]

BLAST of HG10002873 vs. ExPASy TrEMBL
Match: A0A0A0L0X7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.6e-80
Identity = 172/243 (70.78%), Postives = 182/243 (74.90%), Query Frame = 0


Query: 1   MEKNTNANANDN------TVSETSPDQRHGGESSG------------------------- 60
           MEKNTN NAN N       VSETSPDQRH  E S                          
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  ------GPRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQGKKRGRGDGGEQQQ 120
                    +  T GDVRRRQ+V+A + DVGTSSH+HVGGSSD+E GKKRGRGDGGEQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNA-MFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQ 120

Query: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
           QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI
Sbjct: 121 QVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180

Query: 181 RRCQQQLASTLLTVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESD 207
           RRCQQQLASTLLTVAQQV+ SRRGL+IDL QPS ADDGDSP+ T   GFDLN+EPP ESD
Sbjct: 181 RRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESD 240

[Close]

BLAST of HG10002873 vs. ExPASy TrEMBL
Match: A0A6J1L5G4 (uncharacterized protein LOC111500193 OS=Cucurbita maxima OX=3661 GN=LOC111500193 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.1e-69
Identity = 155/223 (69.51%), Postives = 168/223 (75.34%), Query Frame = 0


Query: 1   MEKNTNANANDNTVSE-TSPDQRHGGESS-------------GGPRKKATTGDVRRRQTV 60
           MEKNTNANA+ NTV E TSPDQRHGGE S               P               
Sbjct: 1   MEKNTNANADINTVPESTSPDQRHGGERSPMAVSPPPASIDDNNPTPPVINLSSVAPAPE 60

Query: 61  DATLLDVG---TSSHDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPR 120
             T  DVG   +SSH HVGG S+ E GKKRGRGDGGEQQQQVKAAKKKGELTEVPKG+P+
Sbjct: 61  RGTTGDVGVSSSSSHGHVGGGSNTEVGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGDPK 120

Query: 121 CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVAT 180
           CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR CQQQ ASTLLTVAQ VA 
Sbjct: 121 CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRHCQQQFASTLLTVAQGVAA 180

Query: 181 SRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDDEK 207
           SRRGL+IDL QPSAA++  SPEK+G VGFDLNVE P ES++++
Sbjct: 181 SRRGLDIDLNQPSAAEESGSPEKSGGVGFDLNVEQPPESENDE 223

[Close]

BLAST of HG10002873 vs. ExPASy TrEMBL
Match: A0A6J1E9T9 (uncharacterized protein LOC111431177 OS=Cucurbita moschata OX=3662 GN=LOC111431177 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.2e-69
Identity = 157/231 (67.97%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 1   MEKNTNANAND--------NTVSE-TSPDQRHGGESS-------------GGPRKKATTG 60
           MEKNTNANAN         NT+ E TSPDQRHG E+S               P       
Sbjct: 1   MEKNTNANANPNINVDADINTIPESTSPDQRHGRETSPMAVSPPPASIDDNNPTPPVINL 60

Query: 61  DVRRRQTVDATLLDVGTSS---HDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKKKGELT 120
                    AT  DVGTSS   H HVGG S+ E GKKRGRGDGGEQQQQVKAAKKKGELT
Sbjct: 61  SSVAPAPERATTGDVGTSSSSTHGHVGGGSNTEVGKKRGRGDGGEQQQQVKAAKKKGELT 120

Query: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180
           EVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR CQQQ ASTLL
Sbjct: 121 EVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRHCQQQFASTLL 180

Query: 181 TVAQQVATSRRGLNIDLKQPSAADDGDSPEKTGSVGFDLNVEPPRESDDEK 207
           TVAQ VA SRRGL+IDL QPSAA++ +SPEK+G VGFDLNVE P ESD+++
Sbjct: 181 TVAQGVAASRRGLDIDLNQPSAAEESESPEKSGGVGFDLNVEQPPESDNDE 231

[Close]

BLAST of HG10002873 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14
Identity = 56/150 (37.33%), Postives = 75/150 (50.00%), Query Frame = 0


Query: 70  GKKRGR----------GDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFG 129
           GKK+ R          GDG  + +  K  KK  ELT  PKG P C  C + F SWKA+FG
Sbjct: 96  GKKKSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFG 155

Query: 130 HLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVATSRRGLNIDLKQP---S 189
           H+R+H +R Y+G LPPPT +    R     L S   T+A     S  G+ +  +     S
Sbjct: 156 HMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSA-FTIATVGGGSSGGVAVGGRSSGDFS 215

Query: 190 AADDGDSPEKTG--SVGFDLNVEPPRESDD 205
            +  GD+P   G    G DLNVEP  + ++
Sbjct: 216 GSGGGDAPGSEGGRGSGIDLNVEPVEQVEE 244

[Close]

BLAST of HG10002873 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-13
Identity = 51/129 (39.53%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 85  VKAAKKKG--ELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELD 144
           VK  +KKG  +LT +P+G P C  C K F SWKA+FGHLR H +R Y G LPPPT    +
Sbjct: 123 VKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAE 182

Query: 145 IRRCQQQLASTLLTVAQQV-------ATSRRGLNIDLKQPSAADDGDS-PEKTGSVGFDL 204
                   AST   VA  +       A+S  GL       +A+ DG+      G    DL
Sbjct: 183 EGFGGVATASTGGAVATAISVGEVPTASSAGGL------ATASSDGEGLVSSIGRARIDL 242

[Close]

BLAST of HG10002873 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 34/86 (39.53%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 55  TSSHDHVGGSSDIEQGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKV 114
           +SS+DH          KKR +          K+A K    K      PK    C  C + 
Sbjct: 33  SSSYDH-------SPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRK 92

Query: 115 FKSWKALFGHLRSHPERTYRGALPPP 137
           F SWKALFGH+R HPER +RG  PPP
Sbjct: 93  FWSWKALFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of HG10002873 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.1e-07
Identity = 23/64 (35.94%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 80  EQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAA 139
           E+++++  A+     T+V +G+ RC  C K F++  +LFGH+R HP+RT++G  PPP + 
Sbjct: 103 EKEKEIDLAR-----TDV-EGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPPPSE 160

Query: 140 ELDI 144
           + ++
Sbjct: 163 KFNL 160

[Close]

BLAST of HG10002873 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 46.6 bits (109), Expect = 2.8e-05
Identity = 40/137 (29.20%), Postives = 59/137 (43.07%), Query Frame = 0


Query: 31  PRKKATTGDVRRRQTVDATLLDVGTSSHDHVGGSSDIEQG---------KKR-------- 90
           PR K    + +  +  +A  + +    +DH   S D+EQG         KK         
Sbjct: 28  PRIKPEIEEDQVEEDDEAKNIGLEEEENDHEAKSMDLEQGDVEEEEGEEKKHICCECGKR 87

Query: 91  ---GRGDGGEQQQQVKAAKK---------KGELTEVPKG--EPRCATCNKVFKSWKALFG 137
              G+  GG ++  V   +K          G +    +G  E  C  C K F S KAL+G
Sbjct: 88  FVSGKALGGHKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCYKKFTSMKALYG 147

The following BLAST results are available for this feature:

BLAST of HG10002873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449156.1	3.5e-82	72.43	PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo] >KAA0052913.1 zin...	[more]
XP_011652703.1	9.5e-80	70.78	uncharacterized protein LOC105435052 [Cucumis sativus] >KGN55600.1 hypothetical ...	[more]
XP_038876670.1	1.2e-77	69.83	uncharacterized protein LOC120069065 [Benincasa hispida]	[more]
XP_023007614.1	4.4e-69	69.51	uncharacterized protein LOC111500193 [Cucurbita maxima]	[more]
XP_022923503.1	1.3e-68	67.97	uncharacterized protein LOC111431177 [Cucurbita moschata]	[more]

BLAST of HG10002873 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	5.5e-06	39.53	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	8.0e-05	62.50	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]

BLAST of HG10002873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLS0	1.7e-82	72.43	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BLF2	1.7e-82	72.43	uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=...	[more]
A0A0A0L0X7	4.6e-80	70.78	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 P...	[more]
A0A6J1L5G4	2.1e-69	69.51	uncharacterized protein LOC111500193 OS=Cucurbita maxima OX=3661 GN=LOC111500193...	[more]
A0A6J1E9T9	6.2e-69	67.97	uncharacterized protein LOC111431177 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]

BLAST of HG10002873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35610.1	7.4e-14	37.33	zinc finger (C2H2 type) family protein	[more]
AT4G35700.1	6.2e-13	39.53	zinc finger (C2H2 type) family protein	[more]
AT4G35280.1	3.9e-07	39.53	C2H2-like zinc finger protein	[more]
AT2G26940.1	5.1e-07	35.94	C2H2-type zinc finger family protein	[more]
AT5G56200.1	2.8e-05	29.20	C2H2 type zinc finger transcription factor family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 103..126 e-value: 7.0E-8 score: 32.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 19..206
None	No IPR available	PANTHER	PTHR47591:SF4	TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE	coord: 19..206
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 104..124
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 102..124 score: 8.64193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002873.1	HG10002873.1	mRNA