HG10002860 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCTATTACGTATGAGAGGATTAAGAGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGGCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGGGTGGTTGTTGCGGCGGATCTTAAATTCCTGGCGACGTTCCATTGTTGAGATTAAGAAGGGAGGAAGATCAAAGGGTTGTTCTTCGGCGGCTGCGCAACCGAGGCTCAGCTCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCTACTTCCACTTCCACTTCCATCTGA ATGGATCCTATTACGTATGAGAGGATTAAGAGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGGCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGGGTGGTTGTTGCGGCGGATCTTAAATTCCTGGCGACGTTCCATTGTTGAGATTAAGAAGGGAGGAAGATCAAAGGGTTGTTCTTCGGCGGCTGCGCAACCGAGGCTCAGCTCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCTACTTCCACTTCCACTTCCATCTGA ATGGATCCTATTACGTATGAGAGGATTAAGAGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGGCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGGGTGGTTGTTGCGGCGGATCTTAAATTCCTGGCGACGTTCCATTGTTGAGATTAAGAAGGGAGGAAGATCAAAGGGTTGTTCTTCGGCGGCTGCGCAACCGAGGCTCAGCTCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCTACTTCCACTTCCACTTCCATCTGA MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTSSSSSSTSTSTSI Homology
BLAST of HG10002860 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 141.0 bits (354), Expect = 6.2e-30 Identity = 85/108 (78.70%), Postives = 92/108 (85.19%), Query Frame = 0
BLAST of HG10002860 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29 Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of HG10002860 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of HG10002860 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of HG10002860 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of HG10002860 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30 Identity = 85/108 (78.70%), Postives = 92/108 (85.19%), Query Frame = 0
BLAST of HG10002860 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of HG10002860 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of HG10002860 vs. ExPASy TrEMBL
Match: A0A165XTS4 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014121 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.5e-10 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of HG10002860 vs. ExPASy TrEMBL
Match: A0A4S4EGV4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_019365 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.8e-10 Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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