HG10002798 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002798
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rhomboid domain-containing protein
Location	Chr11: 12838468 .. 12841896 (-)
RNA-Seq Expression	HG10002798
Synteny	HG10002798

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTATTCCCACCATTTTTCACATACGAAACTCTAACGACTCGATCAATTCAACCCAAATAATTTTCAAGCCGAATAACAGAGTGTGCGTTTGCAAATGCGATGTCGTTTCAAAGAATAATCTACCAATTTTCGAGTACTCCAAACATCATTGGAAGATACAGAACAACGGTTCGTCTGTCATTACAATCTTGGCGAGAGCGACAAAGTCGAGAAGAGAGTTGAAGGCATTATTGCAGCATGTGAGATGCAGTAGTGGATTGGATTTTGAGTCACAAGTATTAAAAAAATTAAGCCAGGTTTGGGAGTGTAGTACTAATGAGAAACAGTTGAGATCATTGGGTTCATATTTTGGAAGGCTTCAAGGTGTTGGGAATAAGAAAAATTTAGATTGTTTGAAGAAGATTAAAGTGCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAGTTGCTTGATGCTTATTTTGAAAAAGTTGATGAAGGTAAACTCTTTGATCCACATCCACATATGTTATTGTTCTATTTTTCATGACTTGGTCTCCCTAAATAAATAAATAGTCAAAAGTTTTAAGTTGATAAATTATTGTAGGATCAGTTATTTATATATTATATCATCAATTCCTTTTTGGGTAATTATTTTAAATGACAAAACTGCTGAATATATTTACAAATATAGCAAAATGTCACTGTCTATCAGTAGTAATAGTCACTGATAGATGATAGTAACCTATCACTGATAGACAGTGACATTTTGCTATATTTGTAAATATTTTGGTTCATTTTGTTATATTTATAAATATTTTGGTTTATTTTTCTATATTTGAAAACAACCTTTCCTCTCATGTATAATAGTTTAAAGATGTAAACCCTCTTTTGGATTTTAGTTTTCTATACGTCTTTTTGTTCTTATATTTTCAATTATTTTAGTTTTAGTCCATCAACTTTTCAAATATATATACATATAGTTTCGTCATTAGGATTTTTTTTTTTGGTTAAGTTATTTCATATAAAATTGACTTTTTCCAAAAGTATTTTTCTTAAACCCTTGTATATTGTAAGTATTTATTTATAGAATATTTTTTGTTAAAGGAAATTACAAAAGAAAGTAATAACAACTTTAAGTAGTTTTTTTTTATGCAAACGTCAGTGACAAAAAGTATTTAAAAGTTTATAATCCAAGAAATAGAACCAACATAGAAACGTTTAAAGACTAAAATATAAGATTTAAACCTAATTTAAATCATGAAACTTAATACTATTATCATGAACTAGACCTAGTCAGACACACAAAAAAAAAAAAAAAAAAAAAAAAATCTTGAAAGAGTTTAAACCATTTCAATATCTTGCAATTTTGTAACCATTTCTGAATTTGATATCTAGTAGACAACCATCCTCTGTCTAGTTTTGATGAACAACATGAAGCCAAATTGCTCTTCACATCATCCCCTTTTGAAGATCGCGATAAAGATGACGACAAGACGCATATACAACACGTGAAACCGAATGGTATGATTCACAGAAGCATGCCAAAAACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATGTAAGCTTCAAAACATAACTTAATAAGATTTTGAGTGAGTTTGGAATGACTTGCGATCATTTAACTAACCAATGATTTTTTTTAAAGAAAAATACCTTTTTAATAGGCCCAAAGCACGTTTTAAAAGTCATCCCAAACTCATCTTTATCGATGTTTGACGCAGAATATATGTTTCTAATAAGGTCGCTAACGGTACCATTGCTCGGTTTGTTTTGGAAATATATGCAGAAGTGCTCTGATCTCTGTAAATCTAGCAGTTTTCTTGTTTGAAATAGCAAGTCCAGTAAAAAACTCAGAGCTGCAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATAAATGAGCTTATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGGTACAAGATTGATATTACTCGGTTCGTGTTTCCATTCTAGAACTGTTTTCGACATTTATTCATTCGTCTTTCCCGATAATACCATAAACACAAAAGAGTTTTACTCCTGCAATTAAAGAAAACGTCAAAAACTGTCAACTTAAATATAGTTCAACAGTCGAAAATATTGTCTTTTTTTTTTTACATTGAAAATTCTTTGAATGTACTAAAAGATGCCTTTGCCTACTAAGTACTAACCTCTTTATGCAGCATTCAGGAGTTCTTCATGTTGCTCTGAGTTGTTGGGCGCTTCTTACATTTGGTCGCCAAGTTTGTAGAGAATATGGTCCCTTTACATTTTTCTTAATCTATGTCCTTGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTTCATACTCCCAATCCAACTGTCGGCGGGACGGTAAACAAAAATAACATCCCCCATCCTCCCTCTAAATTTATATCAAACGTTATAGTGTAACAGTTGAGATGTGCATAAGCTAGTTCAAACACTTACGATTAGTAGACAAAAAGGAACTCAATGTTTAGTGTAATTATAATATTTTAAGAGCAATGATTGGGTGCAGCCTAAGATACACCTAATTCCATACTTCCCTTACCTTTACGCAAAAAAGAAAAAAAAATTGTAATTTTTTATTAGACAGCTAGCTGGACTGCAAAAAGATAGGTGCATAGAAGAATTTATGGGATATGTTTAGTGTTTAATGTTGTTTGGTAGTCTCTCATTCCTGATTTTAATGTGAAGTATATTGAACCATTGGAGCAGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTTAGTTACCAATTCCAAAACAAAGATGTGGTGACAAAGGATGTTTCAGACAATATGTTTATGAAAGCAATAATTGCAGCTGTCATAAGTTCAATTTTAAGCAACATTGGTCCCATTGATGAATGGTAAGTTAAAAAGTCCCATAATTTGAAATACCTGCCTTGTTTTTCCTCTCTCTAGAACGGAGGATGTTACGATTCAAGTCGGAAAAACGAACTTACAACTTTTAATATATATAGTGAGTTTGAGATGACGTTTAAAAGATTGTACTTTTATTTTGAGTTAAAAAACAAACAATATAACAAAAGCCTTCTCAAGAGAAGTTAAACACAATGAAAATGTAGAAATGTTTGGTTAATTTGGTTTGTTTGGTGGTGTTGTGTAGGACTCACACAGGAGCAGCTTTTAGTGGGATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTAAATGATGCTTCTTCTTCTTCATCATCATTATCAAGGAGATCAGGCCAAGAAAAGGGAATCAAGGTTGTTAGGAAGTATGCTAATCCTTGCAAATCATTGGCTGTTTTTGCTCTTTTCATTATGGGGTTCATAAGTTTGGTGTTCTTTATTCAACCTCCTTCTTCCACCACATTGGACTTTTGA

mRNA sequence

ATGGCTCTTATTCCCACCATTTTTCACATACGAAACTCTAACGACTCGATCAATTCAACCCAAATAATTTTCAAGCCGAATAACAGAGTGTGCGTTTGCAAATGCGATGTCGTTTCAAAGAATAATCTACCAATTTTCGAGTACTCCAAACATCATTGGAAGATACAGAACAACGGTTCGTCTGTCATTACAATCTTGGCGAGAGCGACAAAGTCGAGAAGAGAGTTGAAGGCATTATTGCAGCATGTGAGATGCAGTAGTGGATTGGATTTTGAGTCACAAGTATTAAAAAAATTAAGCCAGGTTTGGGAGTGTAGTACTAATGAGAAACAGTTGAGATCATTGGGTTCATATTTTGGAAGGCTTCAAGGTGTTGGGAATAAGAAAAATTTAGATTGTTTGAAGAAGATTAAAGTGCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAGTTGCTTGATGCTTATTTTGAAAAAGTTGATGAAGACAACCATCCTCTGTCTAGTTTTGATGAACAACATGAAGCCAAATTGCTCTTCACATCATCCCCTTTTGAAGATCGCGATAAAGATGACGACAAGACGCATATACAACACGTGAAACCGAATGGTATGATTCACAGAAGCATGCCAAAAACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGTGCTCTGATCTCTGTAAATCTAGCAGTTTTCTTGTTTGAAATAGCAAGTCCAGTAAAAAACTCAGAGCTGCAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATAAATGAGCTTATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGTTCTTCATGTTGCTCTGAGTTGTTGGGCGCTTCTTACATTTGGTCGCCAAGTTTGTAGAGAATATGGTCCCTTTACATTTTTCTTAATCTATGTCCTTGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTTCATACTCCCAATCCAACTGTCGGCGGGACGTCTCTCATTCCTGATTTTAATGTGAAGTATATTGAACCATTGGAGCAGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTTAGTTACCAATTCCAAAACAAAGATGTGGTGACAAAGGATGTTTCAGACAATATGTTTATGAAAGCAATAATTGCAGCTGTCATAAGTTCAATTTTAAGCAACATTGGTCCCATTGATGAATGGACTCACACAGGAGCAGCTTTTAGTGGGATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTAAATGATGCTTCTTCTTCTTCATCATCATTATCAAGGAGATCAGGCCAAGAAAAGGGAATCAAGGTTGTTAGGAAGTATGCTAATCCTTGCAAATCATTGGCTGTTTTTGCTCTTTTCATTATGGGGTTCATAAGTTTGGTGTTCTTTATTCAACCTCCTTCTTCCACCACATTGGACTTTTGA

Coding sequence (CDS)

ATGGCTCTTATTCCCACCATTTTTCACATACGAAACTCTAACGACTCGATCAATTCAACCCAAATAATTTTCAAGCCGAATAACAGAGTGTGCGTTTGCAAATGCGATGTCGTTTCAAAGAATAATCTACCAATTTTCGAGTACTCCAAACATCATTGGAAGATACAGAACAACGGTTCGTCTGTCATTACAATCTTGGCGAGAGCGACAAAGTCGAGAAGAGAGTTGAAGGCATTATTGCAGCATGTGAGATGCAGTAGTGGATTGGATTTTGAGTCACAAGTATTAAAAAAATTAAGCCAGGTTTGGGAGTGTAGTACTAATGAGAAACAGTTGAGATCATTGGGTTCATATTTTGGAAGGCTTCAAGGTGTTGGGAATAAGAAAAATTTAGATTGTTTGAAGAAGATTAAAGTGCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAGTTGCTTGATGCTTATTTTGAAAAAGTTGATGAAGACAACCATCCTCTGTCTAGTTTTGATGAACAACATGAAGCCAAATTGCTCTTCACATCATCCCCTTTTGAAGATCGCGATAAAGATGACGACAAGACGCATATACAACACGTGAAACCGAATGGTATGATTCACAGAAGCATGCCAAAAACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGTGCTCTGATCTCTGTAAATCTAGCAGTTTTCTTGTTTGAAATAGCAAGTCCAGTAAAAAACTCAGAGCTGCAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATAAATGAGCTTATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGTTCTTCATGTTGCTCTGAGTTGTTGGGCGCTTCTTACATTTGGTCGCCAAGTTTGTAGAGAATATGGTCCCTTTACATTTTTCTTAATCTATGTCCTTGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTTCATACTCCCAATCCAACTGTCGGCGGGACGTCTCTCATTCCTGATTTTAATGTGAAGTATATTGAACCATTGGAGCAGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTTAGTTACCAATTCCAAAACAAAGATGTGGTGACAAAGGATGTTTCAGACAATATGTTTATGAAAGCAATAATTGCAGCTGTCATAAGTTCAATTTTAAGCAACATTGGTCCCATTGATGAATGGACTCACACAGGAGCAGCTTTTAGTGGGATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTAAATGATGCTTCTTCTTCTTCATCATCATTATCAAGGAGATCAGGCCAAGAAAAGGGAATCAAGGTTGTTAGGAAGTATGCTAATCCTTGCAAATCATTGGCTGTTTTTGCTCTTTTCATTATGGGGTTCATAAGTTTGGTGTTCTTTATTCAACCTCCTTCTTCCACCACATTGGACTTTTGA

Protein sequence

MALIPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCDVVSKNNLPIFEYSKHHWKIQNNGSSVITILARATKSRRELKALLQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGSYFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDEDNHPLSSFDEQHEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFISLVFFIQPPSSTTLDF

Homology

[Close]

BLAST of HG10002798 vs. NCBI nr
Match: XP_038883181.1 (RHOMBOID-like protein 9, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 803.1 bits (2073), Expect = 1.3e-228
Identity = 415/488 (85.04%), Postives = 440/488 (90.16%), Query Frame = 0


Query: 1   MALIPTIFHIRNSNDSINSTQIIFKPN-NRVCVCKCDVVSKNNLPIFEYSKH-HWKIQNN 60
           MA++PTIF IRN NDSIN TQII KPN  R  +CKCDVVSKNNLPIFEYSK+ HW+IQNN
Sbjct: 1   MAVVPTIFQIRNFNDSINPTQIISKPNYKRASICKCDVVSKNNLPIFEYSKNRHWEIQNN 60

Query: 61  GSSVITILARATKSRRELKAL-LQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS 120
            SSVITI ARATKSRR LKA+ LQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS
Sbjct: 61  DSSVITIAARATKSRRRLKAMFLQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS 120

Query: 121 YFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED--NHPLSSFDEQH 180
           YFGRLQGVGNKKNLD L K KVLDTGQFKAKKEL+LLDAYF+KVDED  NH LSSFDE  
Sbjct: 121 YFGRLQGVGNKKNLDSLNKRKVLDTGQFKAKKELELLDAYFQKVDEDLQNHHLSSFDELQ 180

Query: 181 EAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISVN 240
           E KL+FTSSPFEDR+KDD++ HI+HVK NGMIHRSMPKT QLQEE+VCDLYLISAL+S+N
Sbjct: 181 EDKLVFTSSPFEDRNKDDNEMHIRHVKLNGMIHRSMPKTAQLQEEDVCDLYLISALVSIN 240

Query: 241 LAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 300
           +AV LFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW
Sbjct: 241 IAVLLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 300

Query: 301 ALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLE 360
            L+TFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTP+PTVGGT               
Sbjct: 301 TLVTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGT--------------- 360

Query: 361 QGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAF 420
            GPVFAMIGAWLSYQFQ+KDVVTKDVSDNMF+KAIIAAVISSILSNIGPIDEW+HTGAAF
Sbjct: 361 -GPVFAMIGAWLSYQFQDKDVVTKDVSDNMFLKAIIAAVISSILSNIGPIDEWSHTGAAF 420

Query: 421 SGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFIS 480
           SGMLYGFLTSPIVEVNDA+SSSSS S R GQ KGIK+VRKYA+PCKSLAVFALFIMGF S
Sbjct: 421 SGMLYGFLTSPIVEVNDAASSSSSSSSRKGQHKGIKLVRKYAHPCKSLAVFALFIMGFTS 472

Query: 481 LVFFIQPP 484
           LVFFIQPP
Sbjct: 481 LVFFIQPP 472

[Close]

BLAST of HG10002798 vs. NCBI nr
Match: XP_038883174.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 799.7 bits (2064), Expect = 1.4e-227
Identity = 414/491 (84.32%), Postives = 439/491 (89.41%), Query Frame = 0


Query: 1   MALIPTIFHIRNSNDSINSTQIIFKPN-NRVCVCKCDVVSKNNLPIFEYSKH-HWKIQNN 60
           MA++PTIF IRN NDSIN TQII KPN  R  +CKCDVVSKNNLPIFEYSK+ HW+IQNN
Sbjct: 1   MAVVPTIFQIRNFNDSINPTQIISKPNYKRASICKCDVVSKNNLPIFEYSKNRHWEIQNN 60

Query: 61  GSSVITILARATKSRRELKAL-LQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS 120
            SSVITI ARATKSRR LKA+ LQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS
Sbjct: 61  DSSVITIAARATKSRRRLKAMFLQHVRCSSGLDFESQVLKKLSQVWECSTNEKQLRSLGS 120

Query: 121 YFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE-----DNHPLSSFD 180
           YFGRLQGVGNKKNLD L K KVLDTGQFKAKKEL+LLDAYF+KVDE      NH LSSFD
Sbjct: 121 YFGRLQGVGNKKNLDSLNKRKVLDTGQFKAKKELELLDAYFQKVDEAHTDLQNHHLSSFD 180

Query: 181 EQHEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALI 240
           E  E KL+FTSSPFEDR+KDD++ HI+HVK NGMIHRSMPKT QLQEE+VCDLYLISAL+
Sbjct: 181 ELQEDKLVFTSSPFEDRNKDDNEMHIRHVKLNGMIHRSMPKTAQLQEEDVCDLYLISALV 240

Query: 241 SVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVAL 300
           S+N+AV LFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVAL
Sbjct: 241 SINIAVLLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVAL 300

Query: 301 SCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIE 360
           SCW L+TFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTP+PTVGGT            
Sbjct: 301 SCWTLVTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGT------------ 360

Query: 361 PLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTG 420
               GPVFAMIGAWLSYQFQ+KDVVTKDVSDNMF+KAIIAAVISSILSNIGPIDEW+HTG
Sbjct: 361 ----GPVFAMIGAWLSYQFQDKDVVTKDVSDNMFLKAIIAAVISSILSNIGPIDEWSHTG 420

Query: 421 AAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMG 480
           AAFSGMLYGFLTSPIVEVNDA+SSSSS S R GQ KGIK+VRKYA+PCKSLAVFALFIMG
Sbjct: 421 AAFSGMLYGFLTSPIVEVNDAASSSSSSSSRKGQHKGIKLVRKYAHPCKSLAVFALFIMG 475

Query: 481 FISLVFFIQPP 484
           F SLVFFIQPP
Sbjct: 481 FTSLVFFIQPP 475

[Close]

BLAST of HG10002798 vs. NCBI nr
Match: XP_008455584.1 (PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X5 [Cucumis melo])

HSP 1 Score: 755.7 bits (1950), Expect = 2.4e-214
Identity = 391/488 (80.12%), Postives = 423/488 (86.68%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED----NHPLSSFDEQH 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+D     HPLSSFD+Q 
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTDLHKHPLSSFDDQQ 182

Query: 184 EAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISVN 243
           E KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYLISAL+S+N
Sbjct: 183 EGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSIN 242

Query: 244 LAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 303
           +AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW
Sbjct: 243 IAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 302

Query: 304 ALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLE 363
            LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT               
Sbjct: 303 TLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT--------------- 362

Query: 364 QGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAF 423
            GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEWTHTGAAF
Sbjct: 363 -GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAF 422

Query: 424 SGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFIS 483
           SGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F LFIMGFIS
Sbjct: 423 SGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFIS 469

[Close]

BLAST of HG10002798 vs. NCBI nr
Match: XP_008455583.1 (PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 752.7 bits (1942), Expect = 2.0e-213
Identity = 390/489 (79.75%), Postives = 422/489 (86.30%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE-----DNHPLSSFDEQ 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+       HPLSSFD+Q
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182

Query: 184 HEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISV 243
            E KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYLISAL+S+
Sbjct: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242

Query: 244 NLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 303
           N+AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC
Sbjct: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 302

Query: 304 WALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPL 363
           W LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT              
Sbjct: 303 WTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT-------------- 362

Query: 364 EQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAA 423
             GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEWTHTGAA
Sbjct: 363 --GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAA 422

Query: 424 FSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFI 483
           FSGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F LFIMGFI
Sbjct: 423 FSGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFI 470

[Close]

BLAST of HG10002798 vs. NCBI nr
Match: XP_016901801.1 (PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 747.7 bits (1929), Expect = 6.5e-212
Identity = 390/495 (78.79%), Postives = 423/495 (85.45%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED--NHPLSSFDEQHEA 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+D   HPLSSFD+Q E 
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDLHKHPLSSFDDQQEG 182

Query: 184 KLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLI--------- 243
           KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYL+         
Sbjct: 183 KLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLMLLLEIYICR 242

Query: 244 SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 303
           SAL+S+N+AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL
Sbjct: 243 SALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 302

Query: 304 HVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNV 363
           HVALSCW LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT        
Sbjct: 303 HVALSCWTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT-------- 362

Query: 364 KYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEW 423
                   GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEW
Sbjct: 363 --------GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEW 422

Query: 424 THTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFAL 483
           THTGAAFSGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F L
Sbjct: 423 THTGAAFSGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVL 476

[Close]

BLAST of HG10002798 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-71
Identity = 157/380 (41.32%), Postives = 218/380 (57.37%), Query Frame = 0


Query: 104 ECSTNEKQLRSLGSYFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE 163
           E    +++L+ L SYFG+LQ    K ++     I      +    +EL  L AY +K+ +
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 164 DNHPLSSFDEQHEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMP---KTTQLQEE 223
           D            AK     S   D  K +  +    ++  G+ + + P      + Q E
Sbjct: 132 D------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDEDQAE 191

Query: 224 EVCDLYLISALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP 283
           +  + Y +S L S+N+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWRLVTP
Sbjct: 192 DTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWRLVTP 251

Query: 284 MFLHSGVLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT 343
           MFLHSG+ HVALS WALLTFG +VCR+YG FTF LIY+LGGVSGN  SFLHT +PTVGGT
Sbjct: 252 MFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPTVGGT 311

Query: 344 SLIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILS 403
                           GP FA+IGAWL  Q QNK+++  +  +++F KAII      ILS
Sbjct: 312 ----------------GPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILS 371

Query: 404 NIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPC 463
           + GPID+WT+ GA  +G++YGF T P++++    S         G EK     +  A+PC
Sbjct: 372 HFGPIDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTVGPEK-----QNSADPC 416

Query: 464 KSLAVFALFIMGFISLVFFI 481
           KS  +F +F+   ++ +  I
Sbjct: 432 KSFLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of HG10002798 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-18
Identity = 64/205 (31.22%), Postives = 97/205 (47.32%), Query Frame = 0


Query: 236 LAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 295
           L  FL EI     N+E  +      +GAK N LI  GEWWRL+TP+ LH G+ H+A +  
Sbjct: 189 LMFFLLEINGGSTNTETLV-----AFGAKENSLIAQGEWWRLLTPIVLHIGIAHLAFNTL 248

Query: 296 ALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLE 355
           AL + G  V R YG   F LIY+  G++G++ SF+ +P P+ G +               
Sbjct: 249 ALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGAS--------------- 308

Query: 356 QGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAF 415
            G +F  +GA L     N+ +  + +  N+ +  II       +SN   ID   H G   
Sbjct: 309 -GAIFGCLGALLYVALSNRKMFLRTIGTNIIVIIIINLGFGFAVSN---IDNSGHIG--- 365

Query: 416 SGMLYGFLTSPIVEVNDASSSSSSL 441
            G++ GF  +  + +  A +    L
Sbjct: 369 -GLIGGFFAAAALGLPKAGAFGKRL 365

[Close]

BLAST of HG10002798 vs. ExPASy Swiss-Prot
Match: P46116 (Rhomboid protease AarA OS=Providencia stuartii OX=588 GN=aarA PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-11
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 227 LISALISVNLAVFLFEI--ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLH 286
           L   L+ +N+AV+ ++I  ASP+ + E  L     L+GA I +L L G+WWR    M LH
Sbjct: 23  LTLTLVLLNIAVYFYQIVFASPLDSRESNLI----LFGANIYQLSLTGDWWRYPISMMLH 82

Query: 287 SGVLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTS 329
           S   H+A +C AL   G    R YG F    IY++ G+   L S
Sbjct: 83  SNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFS 122

[Close]

BLAST of HG10002798 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-11
Identity = 53/205 (25.85%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 229 SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 288
           + L+++N+ +++ +IAS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 289 HVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVS-------GNLTSFLHTPNPTVGGTS 348
           H+ ++C++L + G       GP  F  +Y+   V+       G+  S+     P+VG + 
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGAS- 250

Query: 349 LIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSN 408
                          G +F ++G+   +  ++K +V     D M +  IIA  ++  L +
Sbjct: 251 ---------------GAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS 309

Query: 409 IGPIDEWTHTGAAFSGMLYGFLTSP 427
              ID W H G    G    +L  P
Sbjct: 311 -RRIDNWGHIGGLLGGTAMTWLLGP 309

[Close]

BLAST of HG10002798 vs. ExPASy Swiss-Prot
Match: Q9SSR0 (RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.8e-10
Identity = 47/180 (26.11%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 246 PVKNSELQLFSLPSL--YGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWALLTFGRQ 305
           P+K + L   S+P+L   GA    L+  GE WRL++ ++LH G LH+  +  +L+  G +
Sbjct: 76  PIKENMLLGPSIPTLRKLGALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMR 135

Query: 306 VCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLEQGPVFAMI 365
           + +E+G      +YV+ G+ G+L S L              D   + +     G +F ++
Sbjct: 136 LEQEFGFMRIGALYVISGLGGSLVSCL-------------TDSQGERVSVGASGALFGLL 195

Query: 366 GAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAFSGMLYGFL 424
           GA LS    N  +     +    M  I+  V++  +  +  +D   H G   +G   GF+
Sbjct: 196 GAMLSELITNWTIYENKCT--ALMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFV 240

[Close]

BLAST of HG10002798 vs. ExPASy TrEMBL
Match: A0A1S3C0U5 (RHOMBOID-like protein 9, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.2e-214
Identity = 391/488 (80.12%), Postives = 423/488 (86.68%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED----NHPLSSFDEQH 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+D     HPLSSFD+Q 
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTDLHKHPLSSFDDQQ 182

Query: 184 EAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISVN 243
           E KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYLISAL+S+N
Sbjct: 183 EGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSIN 242

Query: 244 LAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 303
           +AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW
Sbjct: 243 IAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 302

Query: 304 ALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLE 363
            LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT               
Sbjct: 303 TLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT--------------- 362

Query: 364 QGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAF 423
            GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEWTHTGAAF
Sbjct: 363 -GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAF 422

Query: 424 SGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFIS 483
           SGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F LFIMGFIS
Sbjct: 423 SGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFIS 469

[Close]

BLAST of HG10002798 vs. ExPASy TrEMBL
Match: A0A1S3C2H9 (RHOMBOID-like protein 9, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 9.8e-214
Identity = 390/489 (79.75%), Postives = 422/489 (86.30%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE-----DNHPLSSFDEQ 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+       HPLSSFD+Q
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182

Query: 184 HEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISV 243
            E KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYLISAL+S+
Sbjct: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242

Query: 244 NLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 303
           N+AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC
Sbjct: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 302

Query: 304 WALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPL 363
           W LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT              
Sbjct: 303 WTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT-------------- 362

Query: 364 EQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAA 423
             GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEWTHTGAA
Sbjct: 363 --GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAA 422

Query: 424 FSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFI 483
           FSGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F LFIMGFI
Sbjct: 423 FSGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFI 470

[Close]

BLAST of HG10002798 vs. ExPASy TrEMBL
Match: A0A1S4E0P7 (RHOMBOID-like protein 9, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 3.2e-212
Identity = 390/495 (78.79%), Postives = 423/495 (85.45%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED--NHPLSSFDEQHEA 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+D   HPLSSFD+Q E 
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDLHKHPLSSFDDQQEG 182

Query: 184 KLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLI--------- 243
           KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYL+         
Sbjct: 183 KLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLMLLLEIYICR 242

Query: 244 SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 303
           SAL+S+N+AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL
Sbjct: 243 SALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 302

Query: 304 HVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNV 363
           HVALSCW LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT        
Sbjct: 303 HVALSCWTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT-------- 362

Query: 364 KYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEW 423
                   GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPIDEW
Sbjct: 363 --------GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEW 422

Query: 424 THTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFAL 483
           THTGAAFSGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F L
Sbjct: 423 THTGAAFSGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFFVL 476

[Close]

BLAST of HG10002798 vs. ExPASy TrEMBL
Match: A0A1S4E1D5 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 5.4e-212
Identity = 390/497 (78.47%), Postives = 423/497 (85.11%), Query Frame = 0


Query: 4   IPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQNNGS 63
           +PT F IRN ND +N TQ I KPN RVC+CKCD VVSKNNLPI   YSKHH W+I NN S
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 64  SVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLGSYF 123
           SV+ I  RA KS   LKALLQHVRCS+GL+FE S+VL+KLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 124 GRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDED----NHPLSSFDEQH 183
           GRLQG+G+KKNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+D     HPLSSFD+Q 
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTDLHKHPLSSFDDQQ 182

Query: 184 EAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLI------- 243
           E KL+FT+SPFED  KDDDK+ IQHVK +GM H+SMP TTQLQEEEVCDLYL+       
Sbjct: 183 EGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLMLLLEIYI 242

Query: 244 --SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSG 303
             SAL+S+N+AVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSG
Sbjct: 243 CRSALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSG 302

Query: 304 VLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDF 363
           VLHVALSCW LLTFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT      
Sbjct: 303 VLHVALSCWTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT------ 362

Query: 364 NVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPID 423
                     GPVFAMIGAWLSYQFQNKDVVTKDVSD MF+KA++AAVISSILSNIGPID
Sbjct: 363 ----------GPVFAMIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPID 422

Query: 424 EWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVF 483
           EWTHTGAAFSGMLYGFLTSP+ +VNDASSSS     R GQEKGIKVVRKYANPCKS A F
Sbjct: 423 EWTHTGAAFSGMLYGFLTSPLGKVNDASSSS-----RRGQEKGIKVVRKYANPCKSFAFF 478

[Close]

BLAST of HG10002798 vs. ExPASy TrEMBL
Match: A0A0A0L0I7 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE=3 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 3.5e-211
Identity = 391/489 (79.96%), Postives = 425/489 (86.91%), Query Frame = 0


Query: 1   MALIPTIFHIRNSNDSINSTQIIFKPNNRVCVCKCD-VVSKNNLPIF-EYSKHH-WKIQN 60
           MA++PT F IRN N++I+      KPN RVCVCK D VVSK+NLP F  YSKHH W+I +
Sbjct: 1   MAVVPTFFQIRNFNETIS------KPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHD 60

Query: 61  NGSSVITILARATKSRRELKALLQHVRCSSGLDFE-SQVLKKLSQVWECSTNEKQLRSLG 120
           N SSV+TI  RA KSRR LKALL HVRCS+GLDFE S+V +KLSQVWECSTNEKQLRSLG
Sbjct: 61  NDSSVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLG 120

Query: 121 SYFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE--DNHPLSSFDEQ 180
           SYFGRLQGVG++KNLD LKK+KVLDTGQFKAKKELQLLDAYF+KVD+    HPLSSFDEQ
Sbjct: 121 SYFGRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKGLHKHPLSSFDEQ 180

Query: 181 HEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMPKTTQLQEEEVCDLYLISALISV 240
            E KL+FT+SP EDR KDD+   I+HVK +GMIH+SMP  TQLQEEEVCDLYLISAL+S+
Sbjct: 181 EEGKLVFTTSPSEDRVKDDE-LQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSI 240

Query: 241 NLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 300
           N+AVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC
Sbjct: 241 NIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 300

Query: 301 WALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPL 360
           W LLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTP+PTVGGT              
Sbjct: 301 WTLLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGT-------------- 360

Query: 361 EQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAA 420
             GPVFAMIGAWLSYQFQNKDV+TKDVSD MF+KA++AAVISSILSNIGPIDEWTHTGAA
Sbjct: 361 --GPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAA 420

Query: 421 FSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPCKSLAVFALFIMGFI 480
           FSGMLYGFLTSPIVEVNDASSSSSS   R GQEKGIK+VRKYANPC+SLA F LFIMGFI
Sbjct: 421 FSGMLYGFLTSPIVEVNDASSSSSS---RRGQEKGIKLVRKYANPCRSLAFFVLFIMGFI 463

Query: 481 SLVFFIQPP 484
           SLVFFIQPP
Sbjct: 481 SLVFFIQPP 463

[Close]

BLAST of HG10002798 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 269.6 bits (688), Expect = 4.8e-72
Identity = 157/380 (41.32%), Postives = 218/380 (57.37%), Query Frame = 0


Query: 104 ECSTNEKQLRSLGSYFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE 163
           E    +++L+ L SYFG+LQ    K ++     I      +    +EL  L AY +K+ +
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 164 DNHPLSSFDEQHEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMP---KTTQLQEE 223
           D            AK     S   D  K +  +    ++  G+ + + P      + Q E
Sbjct: 132 D------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDEDQAE 191

Query: 224 EVCDLYLISALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP 283
           +  + Y +S L S+N+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWRLVTP
Sbjct: 192 DTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWRLVTP 251

Query: 284 MFLHSGVLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT 343
           MFLHSG+ HVALS WALLTFG +VCR+YG FTF LIY+LGGVSGN  SFLHT +PTVGGT
Sbjct: 252 MFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPTVGGT 311

Query: 344 SLIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILS 403
                           GP FA+IGAWL  Q QNK+++  +  +++F KAII      ILS
Sbjct: 312 ----------------GPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILS 371

Query: 404 NIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPC 463
           + GPID+WT+ GA  +G++YGF T P++++    S         G EK     +  A+PC
Sbjct: 372 HFGPIDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTVGPEK-----QNSADPC 416

Query: 464 KSLAVFALFIMGFISLVFFI 481
           KS  +F +F+   ++ +  I
Sbjct: 432 KSFLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of HG10002798 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 269.6 bits (688), Expect = 4.8e-72
Identity = 157/380 (41.32%), Postives = 218/380 (57.37%), Query Frame = 0


Query: 104 ECSTNEKQLRSLGSYFGRLQGVGNKKNLDCLKKIKVLDTGQFKAKKELQLLDAYFEKVDE 163
           E    +++L+ L SYFG+LQ    K ++     I      +    +EL  L AY +K+ +
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 164 DNHPLSSFDEQHEAKLLFTSSPFEDRDKDDDKTHIQHVKPNGMIHRSMP---KTTQLQEE 223
           D            AK     S   D  K +  +    ++  G+ + + P      + Q E
Sbjct: 132 D------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDEDQAE 191

Query: 224 EVCDLYLISALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP 283
           +  + Y +S L S+N+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWRLVTP
Sbjct: 192 DTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWRLVTP 251

Query: 284 MFLHSGVLHVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGT 343
           MFLHSG+ HVALS WALLTFG +VCR+YG FTF LIY+LGGVSGN  SFLHT +PTVGGT
Sbjct: 252 MFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPTVGGT 311

Query: 344 SLIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILS 403
                           GP FA+IGAWL  Q QNK+++  +  +++F KAII      ILS
Sbjct: 312 ----------------GPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILS 371

Query: 404 NIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSLSRRSGQEKGIKVVRKYANPC 463
           + GPID+WT+ GA  +G++YGF T P++++    S         G EK     +  A+PC
Sbjct: 372 HFGPIDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTVGPEK-----QNSADPC 416

Query: 464 KSLAVFALFIMGFISLVFFI 481
           KS  +F +F+   ++ +  I
Sbjct: 432 KSFLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of HG10002798 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-13
Identity = 52/198 (26.26%), Postives = 91/198 (45.96%), Query Frame = 0


Query: 229 SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 288
           + L+++N+ +++ +IAS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 289 HVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNV 348
           H+ ++C++L + G       GP  F  +Y+   V+ +  S+     P+VG +        
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVASSAMSYWFNKAPSVGAS-------- 250

Query: 349 KYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEW 408
                   G +F ++G+   +  ++K +V     D M +  IIA  ++  L +   ID W
Sbjct: 251 --------GAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNW 302

Query: 409 THTGAAFSGMLYGFLTSP 427
            H G    G    +L  P
Sbjct: 311 GHIGGLLGGTAMTWLLGP 302

[Close]

BLAST of HG10002798 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-12
Identity = 53/205 (25.85%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 229 SALISVNLAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVL 288
           + L+++N+ +++ +IAS  K            +GAKIN LI  G+ WRL T   LH+  +
Sbjct: 131 NVLLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPM 190

Query: 289 HVALSCWALLTFGRQVCREYGPFTFFLIYVLGGVS-------GNLTSFLHTPNPTVGGTS 348
           H+ ++C++L + G       GP  F  +Y+   V+       G+  S+     P+VG + 
Sbjct: 191 HLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGAS- 250

Query: 349 LIPDFNVKYIEPLEQGPVFAMIGAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSN 408
                          G +F ++G+   +  ++K +V     D M +  IIA  ++  L +
Sbjct: 251 ---------------GAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS 309

Query: 409 IGPIDEWTHTGAAFSGMLYGFLTSP 427
              ID W H G    G    +L  P
Sbjct: 311 -RRIDNWGHIGGLLGGTAMTWLLGP 309

[Close]

BLAST of HG10002798 vs. TAIR 10
Match: AT1G52580.1 (RHOMBOID-like protein 5 )

HSP 1 Score: 66.6 bits (161), Expect = 6.2e-11
Identity = 47/180 (26.11%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 246 PVKNSELQLFSLPSL--YGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWALLTFGRQ 305
           P+K + L   S+P+L   GA    L+  GE WRL++ ++LH G LH+  +  +L+  G +
Sbjct: 76  PIKENMLLGPSIPTLRKLGALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMR 135

Query: 306 VCREYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTSLIPDFNVKYIEPLEQGPVFAMI 365
           + +E+G      +YV+ G+ G+L S L              D   + +     G +F ++
Sbjct: 136 LEQEFGFMRIGALYVISGLGGSLVSCL-------------TDSQGERVSVGASGALFGLL 195

Query: 366 GAWLSYQFQNKDVVTKDVSDNMFMKAIIAAVISSILSNIGPIDEWTHTGAAFSGMLYGFL 424
           GA LS    N  +     +    M  I+  V++  +  +  +D   H G   +G   GF+
Sbjct: 196 GAMLSELITNWTIYENKCT--ALMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFV 240

The following BLAST results are available for this feature:

BLAST of HG10002798 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883181.1	1.3e-228	85.04	RHOMBOID-like protein 9, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_038883174.1	1.4e-227	84.32	RHOMBOID-like protein 9, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008455584.1	2.4e-214	80.12	PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X5 [Cucumis melo]	[more]
XP_008455583.1	2.0e-213	79.75	PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X4 [Cucumis melo]	[more]
XP_016901801.1	6.5e-212	78.79	PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X3 [Cucumis melo]	[more]

BLAST of HG10002798 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX0	6.8e-71	41.32	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
P54493	1.8e-18	31.22	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
P46116	3.6e-11	38.46	Rhomboid protease AarA OS=Providencia stuartii OX=588 GN=aarA PE=1 SV=1	[more]
F4ICF4	3.6e-11	25.85	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
Q9SSR0	8.8e-10	26.11	RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1	[more]

BLAST of HG10002798 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0U5	1.2e-214	80.12	RHOMBOID-like protein 9, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3C2H9	9.8e-214	79.75	RHOMBOID-like protein 9, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S4E0P7	3.2e-212	78.79	RHOMBOID-like protein 9, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S4E1D5	5.4e-212	78.47	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0L0I7	3.5e-211	79.96	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE...	[more]

BLAST of HG10002798 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38510.1	4.8e-72	41.32	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	4.8e-72	41.32	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G25290.2	1.0e-13	26.26	RHOMBOID-like protein 10	[more]
AT1G25290.1	2.5e-12	25.85	RHOMBOID-like protein 10	[more]
AT1G52580.1	6.2e-11	26.11	RHOMBOID-like protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 224..429 e-value: 1.6E-32 score: 114.7
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 227..427
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 357..426 e-value: 7.2E-5 score: 22.8 coord: 272..341 e-value: 1.4E-18 score: 67.3
None	No IPR available	PANTHER	PTHR43731:SF18	RHOMBOID-LIKE PROTEIN 9, CHLOROPLASTIC	coord: 50..484
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 50..484

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002798.1	HG10002798.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity