HG10002773 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002773
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
LocationChr11: 12125874 .. 12134118 (-)
RNA-Seq ExpressionHG10002773
SyntenyHG10002773
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCTCATAATATTCTCAAGAGCATTCACTATCGCTATCAATGGGTCCACACTCCTTGCTCTTTTCTTACTAGGCCTATTGATGTACGTGTGGTAGATTGTGTATTTATTGATGCTTCACTCATTGAGGTTGGTCCATCAACTTCTTCCCCTCCAACTATTGGTGGGTCAGACAATAAAAACTATCCTCTCCTCTCCAAAATTCGTTGTTGCCCATTTCTCGTTCCACTTCTTCAGACATGCTACATCGCTCTCATGTATTAGACGAAAGAAGTTTATTTGCCTAATTCCATGAATCAAATTCAACTCTTATTCAACTCCCTTAGAAAATCATCTTTAGGAGACTAAGCAATCAAACACATATTTCAATGGCTAATTCAAACTTAAATAGTCATGAAGGATAAACAAGCATGCAGCGGAATTTAAATTGATCAAATTTCACTCTAAGATGCTTAAAAAAAGAGGATTAAACATGCAATTAAAAAGGAAAAATCAAGTTTCAAGAACACTTACCATTGAAGTTCCAAATTCTCCTTCAATACTTGAAGAAAATCAACACCACTTGGTTGTAGACCACCACAAGAGTCTTCTCTACTATTCTCTAGGCTTAGATTGGATGGTGGGATCCAAATTTTTGGTGAATTTTAGAAGGAATGAAGGAAATAGATGAAGAAGAGCAATGGATGTAATTTTGCAAAATTCTCAACCCAAATTAAGCCAAAACCATTCTTATTTATTAAGGATCAACATGCAATCTACTTGCATCTCAAATTGACAACACAAACTTGCAATTTGTTGGCTAATTGTGAGAGTTACAACTAAGCTTCCTGCTTAGTTAGTGGGAAAATCCAATCTTCAAAACATCAATTTTAAATTCAATTTTTTAATTAATTTCCAAAATTGAATTTAAAATCACTTTTAATTTTATTTTTTTTAAAATAATTAATTAAATAAAAAATAATTAAATATTTAATTAATTAAATATAATATTATTTTAATATTAAATAATAAAATAATATTATTTTTTTCACTTTTTCCGATTTTTCCAAAAAATCGATATAAATCTCTATTCATATAATTAATATTTAAATCATATTTAAATATCAAAATTAACTCTATTTGTCCGTTTAATTCATAATTAAACGTCGATATATCGTATATATCTGACTTTCATTCCTTAAGCCAAGATTGAACTGTTCAATCTTACTCACCACAGTATCTAAGATTTTAGTCCATTTATGAACTAGTAGAGGGATCTAATGGACCTACAGATCATGAGCTCCAACGATTAGAGATTAACCGATCAAGCTCTTTAATCTAGTTAACTAACGGGACACTCCACTAAAGCCCGTAGCTGCACTCTCCTCACTGTACATATATTTTTGTCCACTTGATATAACTGATTCATGCTATGAAATACATGAAATTAGGCTTTTATTTTAGCATTTTTAATGTGAAAAATGAACTCTTGCATGACTTTTATCCAAACTTCGTCTTATTATGTTTAAATGAGCTTAATGATGACTAATCATGTATAGAAGATGATTTTTGCGGATTTAGTGCAGATCTAGTACGTTTTTGACAGGTTTCTTGCTATTTTTCATGTGATGCGCCCATAGAGCAAGTGATGTACCAGCGCTGTCGAGCCCTAATTTTCCAAATTCGATTATGCTCAGATCAGTTGCGATTTTTCTTGGCTAAAAATCCTCGATTCTGCCTGGTGAATCCTCAGAACGCAAATCTCGGCCGTCCTTAACAGATTTGTGGTCTATAAAAGGCGAGAAAACCCTACGTCTTGGATATATAACTCACCGCCGCTGCAATCATCATTTTTCTTCTCCGTTTTACTGTCAAATTTCCAGCACCTTGGGATTCTTTTCTAAGTTCAAGCCAGTAGTCTTAAGAACGAAAGTTCCTTTGAGGCATAGCGGCTCTAGGATTACTCTTCCACATAAGTGTGTGTTGAGGCAAGATTCTTTCTTGAGAGAGGGGAATCGTCCTAGGGAAAGACTTGTTACTTGAGGATTTTCCCAAGTTTACTTGAGTTGTATCTATTTTCCAACTTTATTGTTTTCGTGTTATTTTCCATTTTACATTTTACCAATCAAACGTTATATTGTAGCTATGGTTTATGATTTAATAAAAATGATTATTTTATTAAAAGTCATGGGTTAAATATTTTTAGGGGTTTGACAACGTGAAAGCCTTAGGGTTGTTATGGCTTAGGTTATGTAATGCTCACACCAATTTGTGTAATCACATTCTCTTTGTTGATTTTAAAAGATAAAATCGCTAAGTTCAACTGGTCATTTGATTTAACGATTTAGCGGAGCTCTAATGCTGAGAAGGTTAGGGTGTAAGCAGATTTCACAAAGGGATATGGGACTAAGAGCCTAGACATAGGATGGTCATGTTACCTTAGAAATAAGGGACACCATATGATAAAGGAATTAAACTTGATTTAATCTAAGATCCAGCTAAGCATGGAAACATTAGGCATTAGTTGCTTAGAACTCCTAAAGGAACTTGACACAAGACTGAATAGGTGTAATTTCCTGTCCATGTGTAAATCATTGTTTGGTGTGATGCGGTCACATCACTTAAGGCATAACACCCGAATGGCCGTAGCATTGTTACCCCTGTTTGATTCCCATTGTTATTTGTTTTTAAGTTTTCTTTCACCAAAAGTTCTAAATTTTCTCTTTGGTTACTTTGGTTACATTGGTCAACAATCATAATAATCTTAAACTCAATCTAGTCCTGTGGGATTCGACACTTGGAATACTCCAAGTTATTACTTCATCGGTCGTGTATGCTTGCACGTAGACCTTACTTATTCTATATTTTCTATCATCTTTATCATTCATATACGCCCGATCGATCAATAACCATAATAAGTAAGTCGATCCTTCACAGGTTGTCCGTAATCACAGCTAGGTCAAAATTATCGTTTTACCCCTGTGAATACATCTTGTTCCTTAAGTCCCACTGATCCTCTAATGAACAATTGGTTTGTGATCCTATCACTAAATTGAGTCCCTCTCCGGTCAATGAGAGGGTGAGACCCCTTGTTCAAGACTCGAAATCAATACTTAAGGGAACAACCTATCTACTAACCCTAAGTCGGGTAGAAGCGAATTCCTTCTCGCAAAACTATGTCCCTAGCTATCTACTCGGTCTTACCCCTGAAATGGGAGGCTTATTGGGTCGGTGCACCCGGGCCACTCTCACCCATACAGATCTAAGGATAATCCCGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCTAGTTGAAATAGTCAGTATTTAACAGTAAACGACGTTATAAAGTAATAGTGACTATTTCGTGGTCCGGTCTTAGGCAAACTCATTGCATAGAACGCCCCCACTCACATTTCTCCACATGAACGATTTAGGATCACATCATTTGTATCAAATACAAAGTGGGCCGCATTCAATAGTATCTCCAAGATAAGGTAGTACCCAACCTTATCCTTATACTATAGACCGTTTTGGCTATTTACTCGAACTTGATCCATTTTTATGTCATTACATAAAGTTCAAGTTTTCATACTAAAGCCATGGGTTCTTAGTTTATTGGATTTAGAGTTATATTAACAACAATTCACTTTATTCAATAACAAGTTTATTGAATAACATCGATAACAACTTTATTGATAAATAGAATACACGTTAATGTTTACAAACTATGAGTTTTAGGACATAAAACCCAACAAGTCACACAATCCAATGATCCCATAGGTATTATCCTATGTCTAGAGGTTAAATGAAATTCTATGTCTAGGCTTTTCTTCTATATTACTTTTATGACAACCGTTTATTATCTAACTCTTTTGATATTAGACTTAACATTATATGTCAACTTAGGCAATCAATCTAAGTTAACAAATATGCATAAAATCAATAAAAACAAATATAAACTAAGTATTGAGCAAGATAAGAGGGGACATATATGGAGCTTTTATTCCAACCTTAAGGCATCCACATCTTTGAATCCCAAAAGGATGTTTAGCTCATAATGTAAGTAAAGGATACAAAGTGTGAAGAATGGAATAACTCATATTATTAAATGGATGGAAACAAATTAATACAAACTTGTTTAAATGTAAAAGAATGAAAAATAGTAGCTAAAGAACTTAATACCCATTGTTGTAAATAAAACTTTAGAGTACAAGACAAGGAAAAGAAAGTACAATAAGACTATTGAACTTACCTCCATAAATCACCTAAAACAAGTATAGAATTGATTTGGGATTGGACATTTGAAGTTTAGAAGTTACGAGATGTTTGCGAGATAATTGTGAGATAAAAGACAGTAGCTAAAGAACTCCCTAAAACATGTGTAAAACTTCCCTAAATCACCTAAAACAAGTATAGAATTGATTTGGAGTTGGACATTTAAAGTTTGGAAGTTGCAAGATAATTGCGAGATAAAAAAACAATAGCTAAAAAACTCCATAAAACATGTGTAAAACCACCTATGTGCAAGTCAAGTACCAATTATTAGGGCAAATTAAGTCGTCACAATTTGGAAAAGGAAATCATGTCTTCTACTACTTAAACTAAAACATTTTTCCTTCAATCTCAAATTCCACCCTTTTCTGTGGAAAATGTTCCAATGTAGAAGTCTCAAGAAATGGAATACTCAATTTGAAAAATCGAAACCCACTAAAACTCTACCAAATCAAAGGGTTCATTTGTTTGCAATGTAGAGGAGTCATTATCGATGAAATTGAAGTAAACACAGGTGGGATTTCTAGTTAAAGGAAACAAAATTTCATCACTTATTTTTATATTTCACTTCTGGCCACCAAATTCTTCTCATCGTCCGATTCAGGACCCATTTATCAAGATGAAATTGGGAGATATATTGAAATTGACATTATCACTCGCATAGCAATTGATAACACATCCAGATAAAAATATGTGATCATTTCCTTTGTTTTCTTCTATGCTATGGATTAATTTCTGGGTTGCTTCACACTTTGAGCTTCTTTCTTCTTCTTACTCATAACAGAGGCAATTTCTTGCTTAATTCATTAATTGTAGTCTTATTGGTTTACCCGCTTCCATTCAATTAGATATGTTGATAAATTTAAGAGTGTAAAACTACATGAGTTTCGGAAGCATCAACGAAAGATTTGGGGACTGAAATTAAAATTGAAGGGCGTTTTGGTTTTGATCAACAATGGATATGGAAGTAAGATGGCGACGTGTTCAAGTTTTTGTGCTTACTCATGTCAACATAAGTTATTTTAGAAATTGTCCCAAAATTAAGATTTGGAAAAAAATAAATGGCAAACTACAAAATGCCACATATCTCCTTTCTAACCATCTAAACACAAACAATATGTTCATCGAATTCAACGGTGATTAAACCTAGACCATGATCAATAACTTTGACTAGATGTTTGATTGGGCTTAAAATTATAAGTGGAATAAGCCAAATAATTTAGATCCCGTTTGGAATGACTTCCAAAGTGTTTAAATAAGTGTTTGTAAGTGTAAAAAAAATGTTTATAAACACTTAGAAAATCAATTCAAATGGGCCATTAAAATAGTCAGTCCAACTCAATTCAAGCTTATGTTAGAAATTTGGTCCCAAGCCCAATTTTTAGGCTCAAAGCCACAAGCTCATGTAAGGCCTATGAAAACCTCTATAAATAGAGGTCTCCAAAGCAACTAGGCCCAAGCAAATGTTGTAGTTCAAAGATCGAAGCTTTAAAGACCAAAGCTTGAAAGTTTTTAAGACCTAAAGATAGAGCTTTGAAGATCTAACGAGCACAAAGACTCAAAAGACTTCTAAAAATATTAGAATACTCTTTGAAGCTCTTAAAGTCAAAAGCTCCAAAGATGATTTAGAGTAGAAGTGAAGACTTCAAAGGAAATTTTAGAGAATTCATAAAACAGAACACTTTTCAAAATCTGGAAAAACCCTCAAGATAAATTAACATTCGAGAATAAGCTACAAAGTCGTCGAGACAAATCTCAATCTTGAAAACAAGTTGAACCCCTAAGACAGGTTTATGTTTTTTAGGAAAAACATTAAATGATCAAATATTAGAGATTGTACCTATCATACTTAAATCAAAACTAATTTAGAGTTTATTTAACAAATCAAATTTTTACTAAAAATCTCGTAGAATAAATAGATTCAATGAAAACAAATAAAAACAAAAATGTTGTTTAGAAGATGGATTTAACACTCGAAATATATAGAATCTGTTTAAAAAAATTTAAAAAAAAAAAAAAAAAAAAAATTATCCATCAACCGCAGTTAACACAGCAGCATCAGCATCAGCATCTGGTTCGCTGTTGTCTCTAACCCGTCGCTTAAGATCCAGCAGCAGTTCTGTGTCCGACAAGGCGACAGCGAGTGATCAAAATTCCAGGAAGAAATAAGGAAGTTTGGCGGCCTGAGGTACCGTATTTGCAAGACTCACGGTTGAGATCTTATTTCATGGCCCAGAAAGAGGAGCAGTTGCCGAACAGGGACGACCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCAGACCTTCTTGTATGTAATCTCCCTAACCCGTAATTCTTTCTGTTTCATCTTTTTATTTCGCTAATTATGTCGCTTGGGTCTCTCTCTCTCTGATTTGATTCTGCCCTCTGCTCGATCTTGGTTCTTCAATGTGTTGAATAAGTTCTAACGATTATGTTTTAGGGTCTGAGGTGCGTTATGACAATGTTGTATTTGGAGTATAGAGTAATTGAAATCTTGATTGAGCCCTTCAAGGAGAAATTAAGGTATAGAGACTTAAAAGCCTTCAAGGAATGGAAACGTTTACACCAGTAAAAAGCATTAAAAACACCAAATCCAGAATGTTATCAAAAGATGAAAAGTTGTCACTGAATATCTAAGCCAAAGATGAAGAGTTGTCACTGAATATCTAAGCCAAAGATGAAGAGTTGTCACTGAAGATCTAAGCCAAAGAGACCAAAATATAACCGATTTACAAGCCAAAGATTTTTTTATTTTATTTTTTCATCCTTGAATGGGTTCCCCACAAGGATGGAAAATATTAGAAAATATTTTTAGACCTAACCAAATTCCATCCAAAACGATCCAGAATGAGATTCCAAAACTGCTGAGCAAAGGAGCAACTGCTAAAAATGATGGCATTGAGTCTCCCAAATAAGCCTCACATATAATGCACCATGAAGGAGAAGAGAGAAATGAGGCATTCTCCTCTGAAGGTGATCTGCCATTTTGATTCCCCATGACTAAGCTCGCAAATAATCTCAATTTGGACCTTCCCAGAAAAAATCTCAAAAAAGCTTCTCAATCAATTTGGCAACCTTACTACTAAGTAATTTGAATAAAGTGGGGTAATAAATAGACAGCTTTAGTTCTTGATAGTTTTCTTTATCGTACTGTTGTTAGGATGATCACTGTATTCTACCACAATGGATTATTTTCTTGATTGTTTAGTACTAGGGGCCTAATTAAGGTCGATTAAAGACTATTTACATCAGTAACTTCAGCCTATCCTTGCATATAATAAGGTGGCTGCTTGTATTTTTAGATCTTTTGCCATCTTTGAATAAAATCTCCTCACTGGTTTACATCATTGATTGTGATTGGCATCAAGCCATTTACCCTGCTATATCTGGCCTTGAGTGACCAATTTCGATTCACTATCTTCTTCTTCCACTTTGTAGTTCCCATGACCCTTTTAATTCTCATGTAGTACTATTGTTATCAAAACCTGGAAATTTGTTTTAATGGTTCATCAATTTCTTATTATGTTTAACAATGATAAAACTTGATGTTTGCTTTACCGAGTAATGAATCGAAGAGGTGTGGGAATCAGCTTTCAAAGCCATATTTTTGGAGTGTTTGTGGGAAAAATGATGGTAGGTTTGCTATTTTGTCATATAGGGATCAAGTAATCAGCTGGCACTTTTAGAGAGAATGAACGTCAGGGTGGCCGAAGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAACTGAAGTCAAAGAGTGGTGGGTTTGATGAGTATATAAACCAAATTGAGAAAATAGAACATCAGGTCACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCTAAAGTGTTGTCTGCTTGTCAAAACACGCCTTAA

mRNA sequence

ATGACTGCTCATAATATTCTCAAGAGCATTCACTATCGCTATCAATGGGTCCACACTCCTTGCTCTTTTCTTACTAGGCCTATTGATGTACGTGTGGTAGATTGTGTATTTATTGATGCTTCACTCATTGAGGTTGGTCCATCAACTTCTTCCCCTCCAACTATTGATCCAGCAGCAGTTCTGTGTCCGACAAGGCGACAGCGAGTGATCAAAATTCCAGGAAGAAATAAGGAAGTTTGGCGGCCTGAGGTACCGTATTTGCAAGACTCACGGTTGAGATCTTATTTCATGGCCCAGAAAGAGGAGCAGTTGCCGAACAGGGACGACCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCAGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAGAATGAACGTCAGGGTGGCCGAAGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAACTGAAGTCAAAGAGTGGTGGGTTTGATGAGTATATAAACCAAATTGAGAAAATAGAACATCAGGTCACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCTAAAGTGTTGTCTGCTTGTCAAAACACGCCTTAA

Coding sequence (CDS)

ATGACTGCTCATAATATTCTCAAGAGCATTCACTATCGCTATCAATGGGTCCACACTCCTTGCTCTTTTCTTACTAGGCCTATTGATGTACGTGTGGTAGATTGTGTATTTATTGATGCTTCACTCATTGAGGTTGGTCCATCAACTTCTTCCCCTCCAACTATTGATCCAGCAGCAGTTCTGTGTCCGACAAGGCGACAGCGAGTGATCAAAATTCCAGGAAGAAATAAGGAAGTTTGGCGGCCTGAGGTACCGTATTTGCAAGACTCACGGTTGAGATCTTATTTCATGGCCCAGAAAGAGGAGCAGTTGCCGAACAGGGACGACCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCAGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAGAATGAACGTCAGGGTGGCCGAAGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAACTGAAGTCAAAGAGTGGTGGGTTTGATGAGTATATAAACCAAATTGAGAAAATAGAACATCAGGTCACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCTAAAGTGTTGTCTGCTTGTCAAAACACGCCTTAA

Protein sequence

MTAHNILKSIHYRYQWVHTPCSFLTRPIDVRVVDCVFIDASLIEVGPSTSSPPTIDPAAVLCPTRRQRVIKIPGRNKEVWRPEVPYLQDSRLRSYFMAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNTP
Homology
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BLAST of HG10002773 vs. NCBI nr
Match: XP_004137147.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] >KGN53763.1 hypothetical protein Csa_014951 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-55
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MAQKEE+LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN+RVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNT 216
           ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLS CQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 217 P 218
           P
Sbjct: 121 P 121

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BLAST of HG10002773 vs. NCBI nr
Match: XP_038880795.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-54
Identity = 116/121 (95.87%), Postives = 119/121 (98.35%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MAQKEEQ PNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLALLERMN+RVAEEYKGFGDV
Sbjct: 1   MAQKEEQPPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNLRVAEEYKGFGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNT 216
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSMLESKVLS CQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 217 P 218
           P
Sbjct: 121 P 121

[Close]
BLAST of HG10002773 vs. NCBI nr
Match: XP_008455567.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-53
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MAQKEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNT 216
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSMLESKVLS CQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 217 P 218
           P
Sbjct: 121 P 121

[Close]
BLAST of HG10002773 vs. NCBI nr
Match: KAG6607085.1 (Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.1 bits (531), Expect = 3.7e-50
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 97  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGD 156
           MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNIRVAEEYKGLGD 60

Query: 157 VASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQN 216
           VASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SMLESKVLS CQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]
BLAST of HG10002773 vs. NCBI nr
Match: XP_022949044.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata] >XP_022997803.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita maxima])

HSP 1 Score: 208.4 bits (529), Expect = 6.3e-50
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 97  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGD 156
           MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 157 VASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQN 216
           VASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SMLESKVLS CQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match: F4K657 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis thaliana OX=3702 GN=BLOS2 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 106 NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVE 165
           +RDDLAESL   FTSVS M+KS+L G++N L LLE+MN+RVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 166 QLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKV 210
           Q+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+LESK+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKI 107

[Close]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match: Q54Y67 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium discoideum OX=44689 GN=bloc1s2 PE=3 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 7.8e-11
Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 104 LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVF 163
           LP  +DL  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF
Sbjct: 72  LPVTEDLQNSTKEMFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVF 131

Query: 164 VEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKV 210
           +  LK K   F  Y ++I +++  VT+ E  + +LD++   LE KV
Sbjct: 132 MGDLKIKYEEFQPYFDKINELDKNVTDLEKTVQLLDEYTKRLEQKV 177

[Close]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match: Q6QNY1 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX=9606 GN=BLOC1S2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 31/109 (28.44%), Postives = 51/109 (46.79%), Query Frame = 0 

Query: 100 KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASG 159
           +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 160 MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESK 209
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match: Q4R7C8 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicularis OX=9541 GN=BLOC1S2 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 31/109 (28.44%), Postives = 51/109 (46.79%), Query Frame = 0 

Query: 100 KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASG 159
           +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 160 MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESK 209
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match: Q32WR5 (Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegicus OX=10116 GN=Bloc1s2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.2e-05
Identity = 31/109 (28.44%), Postives = 51/109 (46.79%), Query Frame = 0 

Query: 100 KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASG 159
           +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 160 MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESK 209
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match: A0A0A0KW18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MAQKEE+LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN+RVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNT 216
           ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLS CQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 217 P 218
           P
Sbjct: 121 P 121

[Close]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match: A0A1S3C0T0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX=3656 GN=LOC103495715 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.9e-54
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MAQKEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQNT 216
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSMLESKVLS CQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 217 P 218
           P
Sbjct: 121 P 121

[Close]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match: A0A6J1KEZ0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111492648 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.1e-50
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 97  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGD 156
           MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 157 VASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQN 216
           VASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SMLESKVLS CQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match: A0A6J1GBP4 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452507 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.1e-50
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 

Query: 97  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGD 156
           MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 157 VASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSACQN 216
           VASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SMLESKVLS CQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match: W9R9H2 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018142 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 84/117 (71.79%), Postives = 102/117 (87.18%), Query Frame = 0 

Query: 97  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDV 156
           MA+K +Q P+RD+LAESLN+ FTSV  M+KS+L G++NQL LLE+MN+RV EEYKG+GDV
Sbjct: 1   MAEKTDQQPSRDELAESLNDLFTSVFAMVKSELQGTNNQLELLEKMNLRVGEEYKGYGDV 60

Query: 157 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSAC 214
           ASG+RVFVEQLKSKSG FDEY  +IE I+ QVTEFEAVISMLD++VS LESK+ SAC
Sbjct: 61  ASGLRVFVEQLKSKSGSFDEYAQKIETIDQQVTEFEAVISMLDRYVSALESKLQSAC 117

[Close]
BLAST of HG10002773 vs. TAIR 10
Match: AT5G49550.1 (Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1. )

HSP 1 Score: 138.3 bits (347), Expect = 7.5e-33
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 106 NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVE 165
           +RDDLAESL   FTSVS M+KS+L G++N L LLE+MN+RVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 166 QLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKV 210
           Q+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+LESK+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKI 107

The following BLAST results are available for this feature:
BLAST of HG10002773 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137147.12.2e-5596.69biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] ... [more]
XP_038880795.11.5e-5495.87biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida... [more]
XP_008455567.11.2e-5394.21PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumi... [more]
KAG6607085.13.7e-5090.08Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbit... [more]
XP_022949044.16.3e-5090.08biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschat... [more]
BLAST of HG10002773 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4K6571.1e-3165.38Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis tha... [more]
Q54Y677.8e-1135.85Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium d... [more]
Q6QNY11.3e-0528.44Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX... [more]
Q4R7C81.3e-0528.44Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicul... [more]
Q32WR52.2e-0528.44Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegic... [more]
BLAST of HG10002773 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW181.1e-5596.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1[more]
A0A1S3C0T05.9e-5494.21biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX... [more]
A0A6J1KEZ03.1e-5090.08biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxim... [more]
A0A6J1GBP43.1e-5090.08biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita mosch... [more]
W9R9H21.3e-3771.79Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018142 PE=3 SV=1[more]
BLAST of HG10002773 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G49550.17.5e-3365.38Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction wi... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..194
NoneNo IPR availablePANTHERPTHR47882BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2coord: 85..216
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 116..209
e-value: 6.1E-25
score: 87.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002773.1HG10002773.1mRNA