HG10002753 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002753
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ulp1-like peptidase
Location	Chr11: 11519561 .. 11520649 (-)
RNA-Seq Expression	HG10002753
Synteny	HG10002753

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCAAGATCATGCCAGAGAACTATTTTAAGGCACAGTTGACCTCCTTTAGCCTTCTAATCAAAATCAATGAGGTTGTCCTTAGGAAATTAACTAGGGTCCAGTTAGATATGTTTAGACAAACCATATTTGGACCCATCCTAGACTGTAACATCTCACTTGATGGCCAGCTTATATACCACTTTCTTCTTAGGGAGGTTGTGGATGAGAGATCGGACATCATTTCTTTTAACCTATTCGAGAACAAAGTATCATCAAGAAGTTTGACCTCATCATCAGGTATAAAGTATGCTTGAGGAACGTACTAGCGTTGGGAACCCCACTAGGCTTAGGAGCTTGTACTTCAAGGACAGTACAATAATGAAGAAGTTTGAAGCAGATGCAGTGAAAGTCAAATTTGCATGTTTCATTGAGTGGGTGATGATAGGGAGGGAGAAGAAGCAAAAGTTTAACTGTAGTCTCTTAGGCATCGTGGACGATTGCGAGATTTTCTGAAATTACGATTGGAGCGAGCTCAATTTTAAGAAGATGATAAATAGCCTAAGAAAGTGTTGTCCCATACCGCTGATCATGAGAACCTTGGTTTGACAATGAAATATAGCATGTACGGGTTCCCACTTATGTTCCAGATTGGTGGTCCTTCTCATTTAAACTCTTATTTTTCTTATTTGTTTTGGTTATTGTTTTTTTTTTTTTTTTTGAAATGTTCCTTTATTTATTTTCATTCTTCTTTGCTAAATGTTTGTAGGTGGGGCATATAAGATTATTTATGTCTCTTACACTGTTACAATCCGTTCCAACGAGACGGTGATTCCATGTTTGTCTCGATGGGTGTGCACCTCTTCCTCATTGTACAACGTACTACGTAGGGATATATTTGAGTCACGATAGGTAAGAAAATAGCCGCTTTATCTAAGGTTTAGGTTTTAGGGTTAGTGTTTACTGATGTTTTAGATATTTTTTATGCAGACAAGAACTCGTGTTACTATGAGATAGTAACCAGCGACGAGGAGGTAGCTCAGATGGAGTGCACGGTGTCTGCCCATAAGGCACATGACCTTCTTCTTGAATCAGTCAATGTTTAG

mRNA sequence

ATGGACTCCAAGATCATGCCAGAGAACTATTTTAAGGCACAGTTGACCTCCTTTAGCCTTCTAATCAAAATCAATGAGGTTGTCCTTAGGAAATTAACTAGGGTCCAGTTAGATATGTTTAGACAAACCATATTTGGACCCATCCTAGACTGTAACATCTCACTTGATGGCCAGCTTATATACCACTTTCTTCTTAGGGAGGTTGTGGATGAGAGATCGGACATCATTTCTTTTAACCTATTCGAGAACAAAGTATCATCAAGAAGTTTGACCTCATCATCAGACAAGAACTCGTGTTACTATGAGATAGTAACCAGCGACGAGGAGGTAGCTCAGATGGAGTGCACGGTGTCTGCCCATAAGGCACATGACCTTCTTCTTGAATCAGTCAATGTTTAG

Coding sequence (CDS)

ATGGACTCCAAGATCATGCCAGAGAACTATTTTAAGGCACAGTTGACCTCCTTTAGCCTTCTAATCAAAATCAATGAGGTTGTCCTTAGGAAATTAACTAGGGTCCAGTTAGATATGTTTAGACAAACCATATTTGGACCCATCCTAGACTGTAACATCTCACTTGATGGCCAGCTTATATACCACTTTCTTCTTAGGGAGGTTGTGGATGAGAGATCGGACATCATTTCTTTTAACCTATTCGAGAACAAAGTATCATCAAGAAGTTTGACCTCATCATCAGACAAGAACTCGTGTTACTATGAGATAGTAACCAGCGACGAGGAGGTAGCTCAGATGGAGTGCACGGTGTCTGCCCATAAGGCACATGACCTTCTTCTTGAATCAGTCAATGTTTAG

Protein sequence

MDSKIMPENYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREVVDERSDIISFNLFENKVSSRSLTSSSDKNSCYYEIVTSDEEVAQMECTVSAHKAHDLLLESVNV

Homology

[Close]

BLAST of HG10002753 vs. NCBI nr
Match: XP_022157016.1 (uncharacterized protein LOC111023842 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 6.0e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F   LT+F+ + K +  +  +LT  QLDMFRQT FGPILD ++  +G LI+H LLREV
Sbjct: 15 DWFPTTLTNFAHVDKTSTRIKARLTPTQLDMFRQTCFGPILDMDVVFNGPLIHHLLLREV 74

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 75 EEPRQDVISFDLFGKRVS 92

[Close]

BLAST of HG10002753 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F A LT+ + + K +  +  +LT  QLDMFRQT FGPILD ++  +G LI+H LLREV
Sbjct: 11 DWFPATLTNLAHIDKTSTRIKARLTPTQLDMFRQTCFGPILDIDVVFNGPLIHHLLLREV 70

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 71 EEPRQDVISFDLFGKRVS 88

[Close]

BLAST of HG10002753 vs. NCBI nr
Match: XP_022154967.1 (uncharacterized protein LOC111022112 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-10
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1  MDSKIMPENYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLI 60
          M  KI  +++F A L++ S + K +  +  +LT  QLDMF QT FGPIL  N+  +G L+
Sbjct: 3  MTVKINQDDWFPAALSNLSHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGPLL 62

Query: 61 YHFLLREVVDERSDIISFNLFENKVS 87
          +H LLREV + R ++ISFNLF N VS
Sbjct: 63 HHLLLREVEEPRDBLISFNLFGNMVS 88

[Close]

BLAST of HG10002753 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 1  MDSKIMPENYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLI 60
          M  KI  +++F A L++ + + K +  +  +LT  QLDMF QT FGPIL  N+  +G L+
Sbjct: 3  MTLKINQDDWFPAALSNLAHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGPLL 62

Query: 61 YHFLLREVVDERSDIISFNLFENKVS 87
          +H LLREV + + D+ISFNLF N+VS
Sbjct: 63 HHLLLREVEEPKDDLISFNLFGNRVS 88

[Close]

BLAST of HG10002753 vs. NCBI nr
Match: XP_022146372.1 (uncharacterized protein LOC111015600 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-10
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F A LT+ + + K    +  +LT  QLDMFRQT FGPILD  +  +G LI+H LL EV
Sbjct: 11 DWFPATLTNLAHVDKTTTRIKARLTPTQLDMFRQTCFGPILDMGVVFNGPLIHHLLLIEV 70

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 71 EEPRQDVISFDLFRKRVS 88

[Close]

BLAST of HG10002753 vs. ExPASy TrEMBL
Match: A0A6J1DWQ3 (uncharacterized protein LOC111023842 OS=Momordica charantia OX=3673 GN=LOC111023842 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F   LT+F+ + K +  +  +LT  QLDMFRQT FGPILD ++  +G LI+H LLREV
Sbjct: 15 DWFPTTLTNFAHVDKTSTRIKARLTPTQLDMFRQTCFGPILDMDVVFNGPLIHHLLLREV 74

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 75 EEPRQDVISFDLFGKRVS 92

[Close]

BLAST of HG10002753 vs. ExPASy TrEMBL
Match: A0A6J1DN46 (uncharacterized protein LOC111022112 OS=Momordica charantia OX=3673 GN=LOC111022112 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1  MDSKIMPENYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLI 60
          M  KI  +++F A L++ S + K +  +  +LT  QLDMF QT FGPIL  N+  +G L+
Sbjct: 3  MTVKINQDDWFPAALSNLSHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGPLL 62

Query: 61 YHFLLREVVDERSDIISFNLFENKVS 87
          +H LLREV + R D+ISFNLF N VS
Sbjct: 63 HHLLLREVEEPRDDLISFNLFGNMVS 88

[Close]

BLAST of HG10002753 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.8e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F A LT+ + + K +  +  +LT  QLDMFRQT FGPILD ++  +G LI+H LLREV
Sbjct: 11 DWFPATLTNLAHIDKTSTRIKARLTPTQLDMFRQTCFGPILDIDVVFNGPLIHHLLLREV 70

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 71 EEPRQDVISFDLFGKRVS 88

[Close]

BLAST of HG10002753 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.5e-11
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 1  MDSKIMPENYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLI 60
          M  KI  +++F A L++ + + K +  +  +LT  QLDMF QT FGPIL  N+  +G L+
Sbjct: 3  MTLKINQDDWFPAALSNLAHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGPLL 62

Query: 61 YHFLLREVVDERSDIISFNLFENKVS 87
          +H LLREV + + D+ISFNLF N+VS
Sbjct: 63 HHLLLREVEEPKDDLISFNLFGNRVS 88

[Close]

BLAST of HG10002753 vs. ExPASy TrEMBL
Match: A0A6J1CZE8 (uncharacterized protein LOC111015600 OS=Momordica charantia OX=3673 GN=LOC111015600 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 9  NYFKAQLTSFSLLIKINEVVLRKLTRVQLDMFRQTIFGPILDCNISLDGQLIYHFLLREV 68
          ++F A LT+ + + K    +  +LT  QLDMFRQT FGPILD  +  +G LI+H LL EV
Sbjct: 11 DWFPATLTNLAHVDKTTTRIKARLTPTQLDMFRQTCFGPILDMGVVFNGPLIHHLLLIEV 70

Query: 69 VDERSDIISFNLFENKVS 87
           + R D+ISF+LF  +VS
Sbjct: 71 EEPRQDVISFDLFRKRVS 88

The following BLAST results are available for this feature:

BLAST of HG10002753 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157016.1	6.0e-11	50.00	uncharacterized protein LOC111023842 [Momordica charantia]	[more]
XP_022153201.1	7.8e-11	50.00	uncharacterized protein LOC111020757 [Momordica charantia]	[more]
XP_022154967.1	1.0e-10	47.67	uncharacterized protein LOC111022112 [Momordica charantia]	[more]
XP_022157020.1	1.3e-10	46.51	uncharacterized protein LOC111023847 [Momordica charantia]	[more]
XP_022146372.1	8.6e-10	48.72	uncharacterized protein LOC111015600 [Momordica charantia]	[more]

BLAST of HG10002753 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10002753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWQ3	2.9e-11	50.00	uncharacterized protein LOC111023842 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DN46	2.9e-11	48.84	uncharacterized protein LOC111022112 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DJX9	3.8e-11	50.00	uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DRZ7	6.5e-11	46.51	uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CZE8	4.2e-10	48.72	uncharacterized protein LOC111015600 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of HG10002753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002753.1	HG10002753.1	mRNA