HG10002659 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTGAGGGAAGTTCAAGTGGATCAATCCTTCCTCTTCCTGATAAATACAGAGTTTTCTTGCATTTGGAGCCTCCAACTATTGACTGGAGGCATGGCAAGCCCCCAACTTATGAAATTGTTAACCAGCTTTTTGAAGATGGAAGAACCAAGGTTTTCTTTTTACACTTTTTCCTTCCCTTTCCTCTTTCTCTCTCTCTAGATCTCATTCAGAGTTCCAAAACAACAGATTTTGTTAGAGTTTTTACTTCCTATCACGCTCTCTTTAATTTACCTCGATAGATCTCGCTATCGTGTTGTTTGGAGCGTAAAGTTGAGTTATGAAGTCTAGAATTGTTTAGTATATATAGTTAATAAATCTCTGTGTTTGAAGCGTAGAGTTGTGTACATATTTGTTTAACCTAGAGTTATAAAATAAAATCTAATTTTCAGTGGCATGTTTTTGTCTTGTAAATTTGTTTTTTTTTTTTTTGTTAACCACTCTATGGAGATAAATGTGAACAAATTTCCAAATGATCTAATGAGAACCAAGTTGGGTGGGGTTTATCAGTTTCCTTTCATCTCACTCCCACTCTTTCTCTCTCAAGTCTCATATCATCTGTTACAATGTTTTGTTTATGGTAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTTCAAAATGCTGTCAAATCATGGGAAATGGAGCTTTCCCACAAGACTAAATTACAGGGTTTCAACACCATAAATCCTGACAAGTTCAAGCTTTTTGTCAATGGTAACTAGTTTTCTTATGTACATATATATAGCATGTAATTAAATTCAAGAGAGAGAAAGGAAAAAAACAAACACTGAATAACTGGCAGATACATGCACATTTAAAAAATTTTAAAACAAAATGCCTTTCTTAACTGACCAACAAACTTAAAGAGGTGTTATTCTTTGATAAACGGGACCATGGGGATTCATAACAATATAAATAATCTTCACTTTTCAGAAACACAGTTTTGAACAAAGTCAAGTGGGTGACATAGACATAAGCAGATATAAGATTTCTATCCAAGTTCATTTTTCCTACAAAAGCAACTTTGGAGAACTTTTTTCTTTTTCTTGTTCAAATCGCCCCTACAAAAAGGGCTTTGAAGATCCTTTTATCATTCATATAGAACAAGGTGCCAAACCTGTTAATTATGATGAGTGCATACTGGATACTGAATCCCATTTTAAAATAATGTTTATCTAAGAATCTCTTTTGGATATTCATGAATGTTTGGCCTAGTTTATACAGCAATCCCCTAATTTAACAGACAGTGCTTGACTGCCTGACCTCAACTCAACACTGCAACAATTCCTAAATCATGTTTACTAAAATGTACATTTTTCAAAATATATATCATTTTTAAACAAAAAGAAAAATCAAAGTCTATGAATTTGATGTATTTTGTTCTCGAGATCTATTATTTTTGTCATATATGTCTATTTAGTATACGTAACAAGAGTTTGATGTATGTCTGACAAATGTTGGTCCTATTTTCAAGTGTCTGATACATCTACTTAACAAGTGTTTGATATGTGTCTAACAAGTGTCGGAGTGTGAAAGTGTCTGCCACAAACACACTAGTGTGTGCTTCTTAGATATAAACTCAGTTTTCTCTCTCACATGCAGGAAGAGAAGGGCTGTCAGGAGAAGAAACACTGAGAGTTGGAAGCTACAATGCATTCCTGAAGAGTCCACTACCAGAGGAGTTTCAATATTACAAAGCAGAGGAAGAGACATTTGAATCATCTCATGAAGCATTTAGGTCTTGTTTTCCAAGAGGATTTGCATGGGAAGTTCTAGAGGTTTATTCGCCTCCTCCTTTGATTGCCTTCAAGTTTAGGCACTGGGGTTTCTTTGAAGGACCTTACAAAGCACATTCCCCAACTGGTGAATTGGTTCAATTCTATGGCTTGGGAACTCTCAAGGTAAAGATGGAGATCCAACCTACCTAATTAAAGTTGTCTATATCATATGAATCACCAAACATTGAAATCAAAACTAGTTGATATATAAGTTTCTACAAGTGATTTTAAAATTGATCTTTCAGTTAAAACACAATGAAAAGTATAAAATTGTGTTCTTGATAGTTGGTTGTTTATGATATTTGCACAGGTTGATGAATCACTGAGGGTCGAAGAAGCTCAAGTCTACTACGATCCAGCTGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTGCCTCAAAATCCCAAACCAAAGACAATGAGAAAGATTTAGCGGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAG ATGGAGACTGAGGGAAGTTCAAGTGGATCAATCCTTCCTCTTCCTGATAAATACAGAGTTTTCTTGCATTTGGAGCCTCCAACTATTGACTGGAGGCATGGCAAGCCCCCAACTTATGAAATTGTTAACCAGCTTTTTGAAGATGGAAGAACCAAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTTCAAAATGCTGTCAAATCATGGGAAATGGAGCTTTCCCACAAGACTAAATTACAGGGTTTCAACACCATAAATCCTGACAAGTTCAAGCTTTTTGTCAATGGAAGAGAAGGGCTGTCAGGAGAAGAAACACTGAGAGTTGGAAGCTACAATGCATTCCTGAAGAGTCCACTACCAGAGGAGTTTCAATATTACAAAGCAGAGGAAGAGACATTTGAATCATCTCATGAAGCATTTAGGTCTTGTTTTCCAAGAGGATTTGCATGGGAAGTTCTAGAGGTTTATTCGCCTCCTCCTTTGATTGCCTTCAAGTTTAGGCACTGGGGTTTCTTTGAAGGACCTTACAAAGCACATTCCCCAACTGGTGAATTGGTTCAATTCTATGGCTTGGGAACTCTCAAGGTTGATGAATCACTGAGGGTCGAAGAAGCTCAAGTCTACTACGATCCAGCTGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTGCCTCAAAATCCCAAACCAAAGACAATGAGAAAGATTTAGCGGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAG ATGGAGACTGAGGGAAGTTCAAGTGGATCAATCCTTCCTCTTCCTGATAAATACAGAGTTTTCTTGCATTTGGAGCCTCCAACTATTGACTGGAGGCATGGCAAGCCCCCAACTTATGAAATTGTTAACCAGCTTTTTGAAGATGGAAGAACCAAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTTCAAAATGCTGTCAAATCATGGGAAATGGAGCTTTCCCACAAGACTAAATTACAGGGTTTCAACACCATAAATCCTGACAAGTTCAAGCTTTTTGTCAATGGAAGAGAAGGGCTGTCAGGAGAAGAAACACTGAGAGTTGGAAGCTACAATGCATTCCTGAAGAGTCCACTACCAGAGGAGTTTCAATATTACAAAGCAGAGGAAGAGACATTTGAATCATCTCATGAAGCATTTAGGTCTTGTTTTCCAAGAGGATTTGCATGGGAAGTTCTAGAGGTTTATTCGCCTCCTCCTTTGATTGCCTTCAAGTTTAGGCACTGGGGTTTCTTTGAAGGACCTTACAAAGCACATTCCCCAACTGGTGAATTGGTTCAATTCTATGGCTTGGGAACTCTCAAGGTTGATGAATCACTGAGGGTCGAAGAAGCTCAAGTCTACTACGATCCAGCTGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTGCCTCAAAATCCCAAACCAAAGACAATGAGAAAGATTTAGCGGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAG METEGSSSGSILPLPDKYRVFLHLEPPTIDWRHGKPPTYEIVNQLFEDGRTKEWPKGSLEETVQNAVKSWEMELSHKTKLQGFNTINPDKFKLFVNGREGLSGEETLRVGSYNAFLKSPLPEEFQYYKAEEETFESSHEAFRSCFPRGFAWEVLEVYSPPPLIAFKFRHWGFFEGPYKAHSPTGELVQFYGLGTLKVDESLRVEEAQVYYDPAELFGGLLKGKTASKSQTKDNEKDLAASVGCPFFKPKE Homology
BLAST of HG10002659 vs. NCBI nr
Match: XP_038901133.1 (pathogen-related protein-like [Benincasa hispida]) HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137 Identity = 235/247 (95.14%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of HG10002659 vs. NCBI nr
Match: XP_008451756.1 (PREDICTED: pathogen-related protein isoform X1 [Cucumis melo] >XP_016901136.1 PREDICTED: pathogen-related protein isoform X1 [Cucumis melo] >KAA0063061.1 pathogen-related protein isoform X1 [Cucumis melo var. makuwa] >TYK16289.1 pathogen-related protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128 Identity = 222/252 (88.10%), Postives = 239/252 (94.84%), Query Frame = 0
BLAST of HG10002659 vs. NCBI nr
Match: XP_011653288.1 (pathogen-related protein isoform X1 [Cucumis sativus] >KGN53568.1 hypothetical protein Csa_015016 [Cucumis sativus]) HSP 1 Score: 468.0 bits (1203), Expect = 5.1e-128 Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of HG10002659 vs. NCBI nr
Match: XP_022982433.1 (pathogen-related protein-like [Cucurbita maxima]) HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124 Identity = 213/251 (84.86%), Postives = 233/251 (92.83%), Query Frame = 0
BLAST of HG10002659 vs. NCBI nr
Match: XP_022942368.1 (pathogen-related protein [Cucurbita moschata] >KAG6600504.1 hypothetical protein SDJN03_05737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 453.8 bits (1166), Expect = 9.9e-124 Identity = 212/251 (84.46%), Postives = 231/251 (92.03%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 215.7 bits (548), Expect = 6.0e-55 Identity = 107/236 (45.34%), Postives = 145/236 (61.44%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy TrEMBL
Match: A0A1S3BS69 (pathogen-related protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492949 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129 Identity = 222/252 (88.10%), Postives = 239/252 (94.84%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy TrEMBL
Match: A0A5A7VBJ0 (Pathogen-related protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00620 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129 Identity = 222/252 (88.10%), Postives = 239/252 (94.84%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy TrEMBL
Match: A0A0A0KVJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082450 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128 Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy TrEMBL
Match: A0A6J1J4T6 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481259 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.7e-125 Identity = 213/251 (84.86%), Postives = 233/251 (92.83%), Query Frame = 0
BLAST of HG10002659 vs. ExPASy TrEMBL
Match: A0A6J1CPH1 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111012921 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.8e-124 Identity = 210/237 (88.61%), Postives = 223/237 (94.09%), Query Frame = 0
BLAST of HG10002659 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.6e-95 Identity = 159/230 (69.13%), Postives = 186/230 (80.87%), Query Frame = 0
BLAST of HG10002659 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 335.1 bits (858), Expect = 4.8e-92 Identity = 156/230 (67.83%), Postives = 183/230 (79.57%), Query Frame = 0
BLAST of HG10002659 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73 Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = 0
BLAST of HG10002659 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73 Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|