HG10002607 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGTGAACAAGTAGTTTTAGTTTTATTATTATATACATTTTTTTTTAGTTTTTTTTTTGGTAGATTTTCAATTTTTCACTCGTTAAGAAAAAAATATGTATATAAAGTAAATTTTCACATATAAAAAAATGTCAAACTATTTACAGAAATAGCAAAAAAAAAATACTGATAACTAGACATTGATAGATTTTTATCAGTATTTATCACTGATAGATCCTGTAGACTTTTATCCGCGTCTATTACAACTATCTAAAAAATTTGTGGTGAACAACAAGACAATTAATATATCTTAGTAATTTCATTTCATTTTTTTTTCTTTTTTTTTTATTTTCTAATGGTATCTTATTAGTTATTCTATTAATTTTAGAGAAAATAACATTAATTAAGTTTAAACTAGATTTTTCTTATTCTTTGAATTCAGTAATTTTAAGGGGAGGTCAAACTATCAACATTTGAAATTAAAATGATAACTAGGTGTCTGATCTAACTATATATATTTTAAAATTAATATCTTAGAATTTGCCAATTATACACACTAGAAGAGCAAACTAAAGGAGTCTGAGGAAACCGTAATGAGATAAATATATATCATTTCATCTTGTTTCCTTAAGATAATTTGTTTGTCCATCAAATTCAATTAACGCTATAGTATATAAGTGTCTGTAAGAGAATCAAAGAAAAAATTATATTGTTTGGGTTTCAATGGGTATGAAACTGACAAGAAAATTACATATTTATAAATTATTTTTTTTTGTCATTCAAATGATACAGTATAAAGTTATATCTTTTAGAAAAGAACATATTCTTTTTATTAAAGTTGGTATCTTTTATTAAAAAAATACATCCTCTCATAAAAAGTTGTTAAATAATGTACAGCTTTATGTTGGTACAAGGAAGACATGGGCCAGCGAGGGAGAGGAGCATGAGACAGGAAAGAAGGAAGTGATAGAAAGTTTGAAGCAATTGGAAGAAGTTCTTGGAGATAAGGCTTACTTTGGAGGTGAAAGTTTGGGATTTGTTGACATTGTTTTGATTGGATTCTACAGTTGGTTTTATGCCCTTGAGACCCTTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAGTAGGTTGGGGGAAGAGATGCTTGCAAAAAGAGAGTGTTTCTAAGTCCCTACCTGACCCAAAAAAGGTCTATTGTGACTATGTGGTTCCATGCAGAAACCTTTGGGGCTTTGACCAAACAAACTGA ATGAGAGGTGAACAACTTTATGTTGGTACAAGGAAGACATGGGCCAGCGAGGGAGAGGAGCATGAGACAGGAAAGAAGGAAGTGATAGAAAGTTTGAAGCAATTGGAAGAAGTTCTTGGAGATAAGGCTTACTTTGGAGGTGAAAGTTTGGGATTTGTTGACATTGTTTTGATTGGATTCTACAGTTGGTTTTATGCCCTTGAGACCCTTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAGTAGGTTGGGGGAAGAGATGCTTGCAAAAAGAGAGTGTTTCTAAGTCCCTACCTGACCCAAAAAAGGTCTATTGTGACTATGTGGTTCCATGCAGAAACCTTTGGGGCTTTGACCAAACAAACTGA ATGAGAGGTGAACAACTTTATGTTGGTACAAGGAAGACATGGGCCAGCGAGGGAGAGGAGCATGAGACAGGAAAGAAGGAAGTGATAGAAAGTTTGAAGCAATTGGAAGAAGTTCTTGGAGATAAGGCTTACTTTGGAGGTGAAAGTTTGGGATTTGTTGACATTGTTTTGATTGGATTCTACAGTTGGTTTTATGCCCTTGAGACCCTTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAGTAGGTTGGGGGAAGAGATGCTTGCAAAAAGAGAGTGTTTCTAAGTCCCTACCTGACCCAAAAAAGGTCTATTGTGACTATGTGGTTCCATGCAGAAACCTTTGGGGCTTTGACCAAACAAACTGA MRGEQLYVGTRKTWASEGEEHETGKKEVIESLKQLEEVLGDKAYFGGESLGFVDIVLIGFYSWFYALETLGNFSIESECPKIVGWGKRCLQKESVSKSLPDPKKVYCDYVVPCRNLWGFDQTN Homology
BLAST of HG10002607 vs. NCBI nr
Match: XP_004147764.1 (probable glutathione S-transferase parC [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 7.5e-40 Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. NCBI nr
Match: KAA0062971.1 (putative glutathione S-transferase [Cucumis melo var. makuwa]) HSP 1 Score: 173.7 bits (439), Expect = 9.8e-40 Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0
BLAST of HG10002607 vs. NCBI nr
Match: KAA0062975.1 (putative glutathione S-transferase parC isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. NCBI nr
Match: XP_008451810.1 (PREDICTED: probable glutathione S-transferase parC isoform X1 [Cucumis melo] >TYK16369.1 putative glutathione S-transferase parC isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 171.0 bits (432), Expect = 6.3e-39 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. NCBI nr
Match: XP_004147761.1 (probable glutathione S-transferase [Cucumis sativus] >KGN53529.1 hypothetical protein Csa_014585 [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 8.3e-39 Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy Swiss-Prot
Match: P49332 (Probable glutathione S-transferase parC OS=Nicotiana tabacum OX=4097 GN=PARC PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-35 Identity = 72/117 (61.54%), Postives = 86/117 (73.50%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy Swiss-Prot
Match: Q03666 (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.4e-35 Identity = 71/117 (60.68%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy Swiss-Prot
Match: F4IA73 (Glutathione S-transferase U21 OS=Arabidopsis thaliana OX=3702 GN=GSTU21 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 7.5e-35 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy Swiss-Prot
Match: Q9SHH7 (Glutathione S-transferase U25 OS=Arabidopsis thaliana OX=3702 GN=GSTU25 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 9.8e-35 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy Swiss-Prot
Match: Q9C8M3 (Glutathione S-transferase U28 OS=Arabidopsis thaliana OX=3702 GN=GSTU28 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy TrEMBL
Match: A0A0A0KVH1 (Glutathione S-transferase OS=Cucumis sativus OX=3659 GN=Csa_4G064650 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.6e-40 Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy TrEMBL
Match: A0A5A7VBA4 (Putative glutathione S-transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00670 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.7e-40 Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy TrEMBL
Match: A0A5A7VAP5 (Putative glutathione S-transferase parC isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00720 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy TrEMBL
Match: A0A5D3D1N4 (Putative glutathione S-transferase parC isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001580 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.1e-39 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. ExPASy TrEMBL
Match: A0A1S3BRS6 (probable glutathione S-transferase parC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492981 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.1e-39 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of HG10002607 vs. TAIR 10
Match: AT1G78360.1 (glutathione S-transferase TAU 21 ) HSP 1 Score: 147.9 bits (372), Expect = 5.3e-36 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of HG10002607 vs. TAIR 10
Match: AT1G17180.1 (glutathione S-transferase TAU 25 ) HSP 1 Score: 147.5 bits (371), Expect = 7.0e-36 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of HG10002607 vs. TAIR 10
Match: AT1G53680.1 (glutathione S-transferase TAU 28 ) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of HG10002607 vs. TAIR 10
Match: AT1G78380.1 (glutathione S-transferase TAU 19 ) HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of HG10002607 vs. TAIR 10
Match: AT1G78370.1 (glutathione S-transferase TAU 20 ) HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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