HG10002452 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTTCCCGTTCGTCTCACCAGTGTTTCCTTCGACTCAAAAGAAAGCCTTCAGTGGACATAACCGATTTTGCGGAATGCGTAGAGAAGAGTCTTGTAGAAGAATGTTTCGATGTTTCGCAACCGTTGCCGCCCAAACAACTCAGGTTTCTTTCTTCTTCTTATTATTATTATAATTTTCTGCCTTCTACTTCATCTTGCTCATGGCATGCCTTTTTACCAGACATATAACTACGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCCGTTCAAGAAACTCAACGGGGCCTTGTCGCATCATCTGATCAACGTTGTGTCATTGAGGAGGCTTTGGTCTGCTTTATTTCTCTCTCTATGTTTATTCTATTCATAAATCATAATCCTTCAGCCTAGCCAGTGCAATTTTTCCGAAGAAGGGGACTTCAATCTGATTCCATGTTGGTTCCAAGTAATGGCTGTAGGTCAATGTAGAGGCGTATAACATGGGTCTCCCTATTGACCTGATGAATTTGGATGGCACATGGCGCCTACAGTATACTTCGGCTCCTGATGTTCTTATTCTTCTAGAAGCTGCAGCCAGACTTCCTTTCTTTCAGGTTCTAATATCTCCTACTTCTCAATCGCTTAAAAAGATGCATTTTATTTTTTTTTAAAAAAGTAGGGCATGTTTGTGTATGTTGTTTATTTCTTTATAAAATAAAGAAATCGCTCAATCAAAGAATATAATTCAAGGACATCCAAATGAAATAGTCCACGGTTAAAAGAAGACCCTCTAAAGGAAGGTGGACTCCAATCAAGCACAATGAAACTTAGCCTATAAATTATAAAACGATTTCGTCACCCCCAAAGAGAAACATAGATCATAGCGAAGGATGAAACATCACAACGACTCCTCTCCAAATCTCTAAAAATTCTATTGTTTCTTTCCCCAAAGACCCCATAAAATAGAACAAACCTCAGCCTGCCAAAGAAACCTCCCTTTGTCACAAAAAGGAGGGTGATATAGGAAATTCTCAATCATCTCCCTTTAATCTCTGTTGTCTAGCAAACTGGACACAAAACGCAGCAAAAAATTAATTCCAAACTGTCGGAGCAAACTCACAGCTCCACATGTTATGATTTAGGTCTTCCTCAGTCAATCTTAGGCATGTTTGGGAGTGATTTAAAAATGATTGAAATCACTTTTGTCATATTTAAAATTACACCGAAACATGTTTTGATGTTTTTAATCATTCAATATCAATTTTAATCTCATGAAAATTGACCTGACATAAGTGATTTTAACCTTTTGAAATTCACTCCAAAACATATCTTAAATCTACTTCCCCTCAATTTCTCTGCAATAATCATTTAAGTCGTCTGTAAGGAGAGGTTTAATGATATCCGGTTTGGTGAGCCATCATCTCTTGTTGATCTAGGAATTTTTGTTTAGTATAATCTTATTTGCTCTTTTTTACCTGAAATTTTGTGCTTCCAAGGCACCAATGTTGATATTTTTGTTATAGTTTTCATTTCCTATTGTTAAGAGGAAAAATAACATTTTTATACTTAGTATTTTTATTGTGTTTCTGTTTTTGACATTTGGCTACACCTGACTCATGGCTGCACTGGTAGATTGGGCAAATCTTCCAGAAATTTGAATGTCGTGACAGTTCGAATGAAGGAATTGTTCGAAATGTCGTTCGTTGGAGCATCCCATCTCTGTTAGAGGTATACCATAAACAAAGTATGGCAATCATGAATTGCAGTTCTAAGCTGGACTGATGGCCTTTGGTGTCCGCTCACTTTGATTTACTTGCAATTCAAGCCACTGTTATCAAACAAATCTAATAATATGTTCTCTTACCCTCCTAATTGGAATTAGAAAGGCTAGAATTTCCTCTTCTCTTTGAGCTTTTTGGTTCCTGGCTCTACTTTTAACTCCTCACCCCAGTGAGGAAAAAATGGTGAGAATGTAGTTGGTAGTTGGTGGATGCCTAATACTTTATTTTTGGCTTTTCAGGAACAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTGCGTAATATCTACCTCCAATTTGAGGAGGTCAGTTTCTGCATCTGTTGCTTTGCTTTCCTTTTGGTCTGTACCATCCTGTGAGTATGGATATGTGAGAATTGCTGGCCTGCAGAGAAACATGTATTTCTTTGTATATTTATTTGTGCTCGCATTCTGTCGTCAATTAGCTAGATAAATTCTTTGATGGTTTTCTGGAGTTTAAGTATTCTCATTTGCCCATGTTTCCACTTCCACTGCCTTCTAGATTCAATAGATGTGCTAAATTGCCCTTAATCAGGTGCTCTGCACAAGAATTGTTCTTTCTATCAGCCGTGTTGAAACTCGGATCACCAAGTTCATTTTATGATTACTTGAAATGACATGAGTAGCAAGAAAATTTAAAGCCAAACTTTTCAACTGGTTATTGTGGAACTTTTTGTAATATGATAACTTTTATTTAGAACGTGTGGGAAACATTGAAGGAAAGGTAATTAGAGACATTTTTTGCATCTTTTAACTGCAATGTCAGAGGCCAAGGAATTTTGAACATCTGGTAGAGCGATTTATGCATCTTTAAATTCTTTGGATACACTTCAAAAAGTATTCTAGTTGTGAGAAATCTGAGGAATTTTATAACGTCTCCTTACGTAGAGAGATTCATCTGCATCTTTAAATGCCATGGAAACACTTTTAAAGTATTGTAGTTGTGAGATATGTGGATGTTGCAAGCTGTTTTTGGCAGATCAGTGTCCAGAATCTAAAGATTAGCGAAGAGTTGCAGGCTTTAATTGCTCCAGCAATACTACCACGGTCATTTGTAAGTCTTCAGGTAAACAAACAGCTGACAAAAATAGTGTTGGTTGAAGAAGCTTGATATCTAATTAGCTGAAAATGAAATTGATGAGTTTAAATGTTAAATGCTCAGATCTTGCAATTTCTTCGGGGTTTTCAAGCTGGGATTCCTGTGAGAAATTCAGGGAGGTAAATCTATGAATATGAGAAGCCCATGAATTGTGAAATGGAATGGTAAAAAATAGGTGCCTTGGAGATTAAAATTAGATGATAATTGCTAAGTATAGTTGGGTTTGAACTTGCAGAAGGCGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTGCTGTTGGTGGCGGCGGAGTTTTTGTGTTTACCAAAGCTCAACCTCTCCAATGCTAA ATGGACTTCCCGTTCGTCTCACCAGTGTTTCCTTCGACTCAAAAGAAAGCCTTCAGTGGACATAACCGATTTTGCGGAATGCGTAGAGAAGAGTCTTGTAGAAGAATGTTTCGATGTTTCGCAACCGTTGCCGCCCAAACAACTCAGACATATAACTACGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCCGTTCAAGAAACTCAACGGGGCCTTGTCGCATCATCTGATCAACGTTGTGTCATTGAGGAGGCTTTGGTCAATGTAGAGGCGTATAACATGGGTCTCCCTATTGACCTGATGAATTTGGATGGCACATGGCGCCTACAGTATACTTCGGCTCCTGATGTTCTTATTCTTCTAGAAGCTGCAGCCAGACTTCCTTTCTTTCAGATTGGGCAAATCTTCCAGAAATTTGAATGTCGTGACAGTTCGAATGAAGGAATTGTTCGAAATGTCGTTCGTTGGAGCATCCCATCTCTGTTAGAGGAACAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTGCGTAATATCTACCTCCAATTTGAGGAGATCAGTGTCCAGAATCTAAAGATTAGCGAAGAGTTGCAGGCTTTAATTGCTCCAGCAATACTACCACGGTCATTTGTAAGTCTTCAGATCTTGCAATTTCTTCGGGGTTTTCAAGCTGGGATTCCTGTGAGAAATTCAGGGAGAAGGCGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTGCTGTTGGTGGCGGCGGAGTTTTTGTGTTTACCAAAGCTCAACCTCTCCAATGCTAA ATGGACTTCCCGTTCGTCTCACCAGTGTTTCCTTCGACTCAAAAGAAAGCCTTCAGTGGACATAACCGATTTTGCGGAATGCGTAGAGAAGAGTCTTGTAGAAGAATGTTTCGATGTTTCGCAACCGTTGCCGCCCAAACAACTCAGACATATAACTACGGGTTGGAAACCAAGAAGAACGATCTTCTGGTTGCCGTTCAAGAAACTCAACGGGGCCTTGTCGCATCATCTGATCAACGTTGTGTCATTGAGGAGGCTTTGGTCAATGTAGAGGCGTATAACATGGGTCTCCCTATTGACCTGATGAATTTGGATGGCACATGGCGCCTACAGTATACTTCGGCTCCTGATGTTCTTATTCTTCTAGAAGCTGCAGCCAGACTTCCTTTCTTTCAGATTGGGCAAATCTTCCAGAAATTTGAATGTCGTGACAGTTCGAATGAAGGAATTGTTCGAAATGTCGTTCGTTGGAGCATCCCATCTCTGTTAGAGGAACAGGAAGGAGCAACTCTGCTTGTATCTGCAAAATTTTCTGTTGTTTCTTTGCGTAATATCTACCTCCAATTTGAGGAGATCAGTGTCCAGAATCTAAAGATTAGCGAAGAGTTGCAGGCTTTAATTGCTCCAGCAATACTACCACGGTCATTTGTAAGTCTTCAGATCTTGCAATTTCTTCGGGGTTTTCAAGCTGGGATTCCTGTGAGAAATTCAGGGAGAAGGCGAGGAGTAGGAGGACTGTATTACCTTTCATATTTGGATGGGAATATGCTATTGGGTCGTGCTGTTGGTGGCGGCGGAGTTTTTGTGTTTACCAAAGCTCAACCTCTCCAATGCTAA MDFPFVSPVFPSTQKKAFSGHNRFCGMRREESCRRMFRCFATVAAQTTQTYNYGLETKKNDLLVAVQETQRGLVASSDQRCVIEEALVNVEAYNMGLPIDLMNLDGTWRLQYTSAPDVLILLEAAARLPFFQIGQIFQKFECRDSSNEGIVRNVVRWSIPSLLEEQEGATLLVSAKFSVVSLRNIYLQFEEISVQNLKISEELQALIAPAILPRSFVSLQILQFLRGFQAGIPVRNSGRRRGVGGLYYLSYLDGNMLLGRAVGGGGVFVFTKAQPLQC Homology
BLAST of HG10002452 vs. NCBI nr
Match: XP_038897398.1 (probable plastid-lipid-associated protein 10, chloroplastic [Benincasa hispida] >XP_038897407.1 probable plastid-lipid-associated protein 10, chloroplastic [Benincasa hispida]) HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144 Identity = 262/278 (94.24%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of HG10002452 vs. NCBI nr
Match: XP_023527019.1 (probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139 Identity = 253/278 (91.01%), Postives = 265/278 (95.32%), Query Frame = 0
BLAST of HG10002452 vs. NCBI nr
Match: XP_022956189.1 (probable plastid-lipid-associated protein 10, chloroplastic [Cucurbita moschata]) HSP 1 Score: 503.8 bits (1296), Expect = 9.3e-139 Identity = 252/278 (90.65%), Postives = 264/278 (94.96%), Query Frame = 0
BLAST of HG10002452 vs. NCBI nr
Match: XP_004144415.1 (probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >XP_011651693.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >XP_011651694.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Cucumis sativus] >KGN58415.1 hypothetical protein Csa_001902 [Cucumis sativus]) HSP 1 Score: 503.8 bits (1296), Expect = 9.3e-139 Identity = 252/278 (90.65%), Postives = 266/278 (95.68%), Query Frame = 0
BLAST of HG10002452 vs. NCBI nr
Match: XP_011651695.1 (probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137 Identity = 252/278 (90.65%), Postives = 266/278 (95.68%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy Swiss-Prot
Match: Q8W4F1 (Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP10 PE=1 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.2e-91 Identity = 176/258 (68.22%), Postives = 209/258 (81.01%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy Swiss-Prot
Match: Q9ZP40 (Plastoglobulin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PG1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06 Identity = 66/252 (26.19%), Postives = 112/252 (44.44%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy Swiss-Prot
Match: B2LU34 (Chromoplast-specific carotenoid-associated protein C1, chromoplastic OS=Oncidium hybrid cultivar OX=141207 GN=CHRC1 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05 Identity = 59/239 (24.69%), Postives = 106/239 (44.35%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy Swiss-Prot
Match: B4F6G1 (Chromoplast-specific carotenoid-associated protein C2, chromoplastic OS=Oncidium hybrid cultivar OX=141207 GN=CHRC2 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.3e-05 Identity = 41/136 (30.15%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy Swiss-Prot
Match: Q6K439 (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAP2 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04 Identity = 42/160 (26.25%), Postives = 77/160 (48.12%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy TrEMBL
Match: A0A0A0L8Y5 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G640570 PE=3 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139 Identity = 252/278 (90.65%), Postives = 266/278 (95.68%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy TrEMBL
Match: A0A6J1GYC1 (probable plastid-lipid-associated protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457959 PE=3 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139 Identity = 252/278 (90.65%), Postives = 264/278 (94.96%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy TrEMBL
Match: A0A5D3DBT1 (Putative plastid-lipid-associated protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00770 PE=3 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136 Identity = 248/277 (89.53%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy TrEMBL
Match: A0A1S3CN36 (probable plastid-lipid-associated protein 10, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502792 PE=3 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136 Identity = 248/277 (89.53%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of HG10002452 vs. ExPASy TrEMBL
Match: A0A1S3CNH6 (probable plastid-lipid-associated protein 10, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502792 PE=3 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.9e-135 Identity = 248/277 (89.53%), Postives = 263/277 (94.95%), Query Frame = 0
BLAST of HG10002452 vs. TAIR 10
Match: AT2G46910.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 337.8 bits (865), Expect = 8.2e-93 Identity = 176/258 (68.22%), Postives = 209/258 (81.01%), Query Frame = 0
BLAST of HG10002452 vs. TAIR 10
Match: AT3G23400.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05 Identity = 52/169 (30.77%), Postives = 72/169 (42.60%), Query Frame = 0
BLAST of HG10002452 vs. TAIR 10
Match: AT4G22240.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05 Identity = 56/230 (24.35%), Postives = 102/230 (44.35%), Query Frame = 0
BLAST of HG10002452 vs. TAIR 10
Match: AT4G04020.1 (fibrillin ) HSP 1 Score: 46.2 bits (108), Expect = 4.9e-05 Identity = 56/230 (24.35%), Postives = 97/230 (42.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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