Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATCTATTTCTCCTGATTATGAGATGGACGATCCTGGTTTTGATGATTTTGATCTTGGTCTCAATTTTTCCAAGGTGAGTCACTCATGTTCTTTCTTTTGTTATCTTAGATTCATCTGGTATCTTCATGTCTTAATGAAATGTGTTTGTAAATTTACCAGTTCTTGGAAGAAGCAAAACATCATGCATCAGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCATGGTTGAAAAGTGACAAAAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACCATTGATGGCAGACCCCGACGCCGTCCGATGTCTGGACCGATTGCTAGCCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGCTTTCTACCTCCAATACCAATCACAATTATGGTCCAATTTATCTTGTTACATAG
mRNA sequence
ATGAAGAAATCTATTTCTCCTGATTATGAGATGGACGATCCTGGTTTTGATGATTTTGATCTTGGTCTCAATTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCATCAGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCATGGTTGAAAAGTGACAAAAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACCATTGATGGCAGACCCCGACGCCGTCCGATGTCTGGACCGATTGCTAGCCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGCTTTCTACCTCCAATACCAATCACAATTATGGTCCAATTTATCTTGTTACATAG
Coding sequence (CDS)
ATGAAGAAATCTATTTCTCCTGATTATGAGATGGACGATCCTGGTTTTGATGATTTTGATCTTGGTCTCAATTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCATCAGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCATGGTTGAAAAGTGACAAAAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACCATTGATGGCAGACCCCGACGCCGTCCGATGTCTGGACCGATTGCTAGCCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGCTTTCTACCTCCAATACCAATCACAATTATGGTCCAATTTATCTTGTTACATAG
Protein sequence
MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
Homology
BLAST of HG10002410 vs. NCBI nr
Match:
XP_038895377.1 (uncharacterized protein LOC120083617 [Benincasa hispida])
HSP 1 Score: 288.5 bits (737), Expect = 3.5e-74
Identity = 140/160 (87.50%), Postives = 148/160 (92.50%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKASTEEETGRKWLAQEKKS 60
M KS+SPDYEMDDPGFDD DL LNFSKFL+EAK HA EQDFKASTEEETGRKWLAQEKKS
Sbjct: 33 MMKSVSPDYEMDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKS 92
Query: 61 KKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMSG 120
KKSWKNTLFSWLKS+KKTKP+PKPE+NPHTPNKRRVHVSGPIYT ATT D RPRR PMSG
Sbjct: 93 KKSWKNTLFSWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSG 152
Query: 121 PIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
PIASLFNPSMRT+MEIPYM LHQL+T N+NH YGPIYLVT
Sbjct: 153 PIASLFNPSMRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 192
BLAST of HG10002410 vs. NCBI nr
Match:
XP_011651731.1 (uncharacterized protein LOC101209455 [Cucumis sativus] >KGN58479.1 hypothetical protein Csa_002575 [Cucumis sativus])
HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71
Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKSIS DYEM++PGFDDFD+GLNFSKFLEEAKHHA++Q FK AS EEET RKWLAQEKK
Sbjct: 1 MKKSISLDYEMENPGFDDFDIGLNFSKFLEEAKHHATQQHFKAASIEEETERKWLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGPIY+ A TIDGRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPIYSEAMTIDGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNP+MRTE EIPYMCLHQLS NTN NYGPIYLVT
Sbjct: 121 GPIASLFNPTMRTETEIPYMCLHQLSAPNTNQNYGPIYLVT 161
BLAST of HG10002410 vs. NCBI nr
Match:
XP_022152626.1 (uncharacterized protein LOC111020302 [Momordica charantia])
HSP 1 Score: 264.2 bits (674), Expect = 7.1e-67
Identity = 133/163 (81.60%), Postives = 144/163 (88.34%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEK 60
M KS+SPD EMDDPGFD+FD L+FSKFLEEAKHHA+ QDFKA STEEE GRKWL QEK
Sbjct: 1 MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEK 60
Query: 61 KSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVHVSGPIYTAATTIDGRPRRRP 120
KSKKSWK T+FSWLKSDKK+KPLPKPE N PHT +KR VHVSGPIYT A T DGRPRRRP
Sbjct: 61 KSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPRRRP 120
Query: 121 MSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
SGPIASLFNPSMRTEMEIPYMCLHQL++ N++HNYGPIYLVT
Sbjct: 121 TSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163
BLAST of HG10002410 vs. NCBI nr
Match:
TYK19187.1 (uncharacterized protein E5676_scaffold522G001220 [Cucumis melo var. makuwa])
HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 132/161 (81.99%), Postives = 144/161 (89.44%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q K AS EEETGRK LAQEKK
Sbjct: 1 MKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEETGRKRLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGP+Y+ ATT +GRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNPSMRTE EIPYMCL QLS N+NHNYGPIYLVT
Sbjct: 121 GPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161
BLAST of HG10002410 vs. NCBI nr
Match:
XP_008460365.1 (PREDICTED: uncharacterized protein LOC103499209 isoform X2 [Cucumis melo] >XP_008460366.1 PREDICTED: uncharacterized protein LOC103499209 isoform X2 [Cucumis melo] >KAA0053600.1 uncharacterized protein E6C27_scaffold190G001740 [Cucumis melo var. makuwa])
HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q K AS EEE GRK LAQEKK
Sbjct: 1 MKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEERGRKRLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGP+Y+ ATT +GRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNPSMRTE EIPYMCL QLS N+NHNYGPIYLVT
Sbjct: 121 GPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161
BLAST of HG10002410 vs. ExPASy TrEMBL
Match:
A0A0A0LC20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKSIS DYEM++PGFDDFD+GLNFSKFLEEAKHHA++Q FK AS EEET RKWLAQEKK
Sbjct: 1 MKKSISLDYEMENPGFDDFDIGLNFSKFLEEAKHHATQQHFKAASIEEETERKWLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGPIY+ A TIDGRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPIYSEAMTIDGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNP+MRTE EIPYMCLHQLS NTN NYGPIYLVT
Sbjct: 121 GPIASLFNPTMRTETEIPYMCLHQLSAPNTNQNYGPIYLVT 161
BLAST of HG10002410 vs. ExPASy TrEMBL
Match:
A0A6J1DIA9 (uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020302 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 133/163 (81.60%), Postives = 144/163 (88.34%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEK 60
M KS+SPD EMDDPGFD+FD L+FSKFLEEAKHHA+ QDFKA STEEE GRKWL QEK
Sbjct: 1 MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEK 60
Query: 61 KSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVHVSGPIYTAATTIDGRPRRRP 120
KSKKSWK T+FSWLKSDKK+KPLPKPE N PHT +KR VHVSGPIYT A T DGRPRRRP
Sbjct: 61 KSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPRRRP 120
Query: 121 MSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
SGPIASLFNPSMRTEMEIPYMCLHQL++ N++HNYGPIYLVT
Sbjct: 121 TSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163
BLAST of HG10002410 vs. ExPASy TrEMBL
Match:
A0A5D3D6L0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001220 PE=4 SV=1)
HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 132/161 (81.99%), Postives = 144/161 (89.44%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q K AS EEETGRK LAQEKK
Sbjct: 1 MKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEETGRKRLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGP+Y+ ATT +GRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNPSMRTE EIPYMCL QLS N+NHNYGPIYLVT
Sbjct: 121 GPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161
BLAST of HG10002410 vs. ExPASy TrEMBL
Match:
A0A1S3CDK1 (uncharacterized protein LOC103499209 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499209 PE=4 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 6.5e-66
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q K AS EEE GRK LAQEKK
Sbjct: 1 MKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEERGRKRLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGP+Y+ ATT +GRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNPSMRTE EIPYMCL QLS N+NHNYGPIYLVT
Sbjct: 121 GPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161
BLAST of HG10002410 vs. ExPASy TrEMBL
Match:
A0A5A7UEH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001740 PE=4 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 6.5e-66
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 0
Query: 1 MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKK 60
MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q K AS EEE GRK LAQEKK
Sbjct: 1 MKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEERGRKRLAQEKK 60
Query: 61 SKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTIDGRPRRRPMS 120
+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VSGP+Y+ ATT +GRPRRRPMS
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMS 120
Query: 121 GPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT 161
GPIASLFNPSMRTE EIPYMCL QLS N+NHNYGPIYLVT
Sbjct: 121 GPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895377.1 | 3.5e-74 | 87.50 | uncharacterized protein LOC120083617 [Benincasa hispida] | [more] |
XP_011651731.1 | 2.8e-71 | 85.71 | uncharacterized protein LOC101209455 [Cucumis sativus] >KGN58479.1 hypothetical ... | [more] |
XP_022152626.1 | 7.1e-67 | 81.60 | uncharacterized protein LOC111020302 [Momordica charantia] | [more] |
TYK19187.1 | 2.7e-66 | 81.99 | uncharacterized protein E5676_scaffold522G001220 [Cucumis melo var. makuwa] | [more] |
XP_008460365.1 | 1.3e-65 | 81.37 | PREDICTED: uncharacterized protein LOC103499209 isoform X2 [Cucumis melo] >XP_00... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LC20 | 1.4e-71 | 85.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1 | [more] |
A0A6J1DIA9 | 3.5e-67 | 81.60 | uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A5D3D6L0 | 1.3e-66 | 81.99 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CDK1 | 6.5e-66 | 81.37 | uncharacterized protein LOC103499209 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7UEH5 | 6.5e-66 | 81.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |