HG10002389 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002389
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionleucine-rich repeat extensin-like protein 3
LocationChr11: 6298901 .. 6299422 (+)
RNA-Seq ExpressionHG10002389
SyntenyHG10002389
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTCGCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGCTTCCATCGCCATCTCCTCCCCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCCTCCATACAGAATAGAAAAAAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA

mRNA sequence

ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTCGCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGCTTCCATCGCCATCTCCTCCCCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCCTCCATACAGAATAGAAAAAAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA

Coding sequence (CDS)

ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTCGCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGCTTCCATCGCCATCTCCTCCCCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCCTCCATACAGAATAGAAAAAAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA

Protein sequence

MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Homology
BLAST of HG10002389 vs. NCBI nr
Match: XP_038900729.1 (proline-rich receptor-like protein kinase PERK2 [Benincasa hispida])

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 153/178 (85.96%), Postives = 155/178 (87.08%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPLTTLIFVISGFAFSVLSLLVESQTQDGAN TLSPPI SPP PSPPPP PPP  PL 
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANPTLSPPIPSPPPPSPPPP-PPPLSPLP 60

Query: 61  SPPPPPPPP----PPPPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVP 120
            PPPPPPPP    PPPP  SPSPPPFSPPPPFP P PPRR PPP HAS  +N KKSPPVP
Sbjct: 61  PPPPPPPPPPILSPPPPPLSPSPPPFSPPPPFPSPLPPRRRPPPFHAS--ENGKKSPPVP 120

Query: 121 PNNI-NTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
           P NI NTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 PKNINNTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175

BLAST of HG10002389 vs. NCBI nr
Match: XP_011651738.2 (LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 5.2e-47
Identity = 144/176 (81.82%), Postives = 150/176 (85.23%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L
Sbjct: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTL-----SPPRPSSPPPSPSPPPPPL 60

Query: 61  SPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVPP 120
            PPPPPP PPP   PP PSPSPPPFSPPPP PPP   RR+PPP  ASS++ +KK PPVPP
Sbjct: 61  PPPPPPPXPPPPITPPPPSPSPPPFSPPPP-PPPHRHRRNPPPPLASSVERKKKRPPVPP 120

Query: 121 NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
            NINTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 KNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170

BLAST of HG10002389 vs. NCBI nr
Match: XP_008463997.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTL-----SPPMPSPPPPSPSPPPPPL 60

Query: 61  SPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVPP 120
            PPPPPPPPPP    P PSPSPPPFSP PP PPP   RRSPPP  ASS++ +KK PPVPP
Sbjct: 61  PPPPPPPPPPPRIISPPPSPSPPPFSPSPP-PPPHRHRRSPPPPLASSMERKKKRPPVPP 120

Query: 121 NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
            NINTNQ SK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 KNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170

BLAST of HG10002389 vs. NCBI nr
Match: XP_022998566.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-29
Identity = 133/205 (64.88%), Postives = 143/205 (69.76%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP L
Sbjct: 1   MERPLSTFIFVISGFAFSILSLLVESQARDGAISSSSPP---PPPPSPPPPSPPPPPPPL 60

Query: 61  SPP------------------PPPPPP---PPPPLPSPSPP---PFSPPPPFPPPPPP-- 120
           SPP                  PPPP P   PPPP+  P PP   P SPPP FPPPP P  
Sbjct: 61  SPPQSPPLSPPQSPPQSPPLSPPPPSPNFVPPPPIFVPPPPPASPSSPPPIFPPPPSPPS 120

Query: 121 --RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQ 174
              RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQ
Sbjct: 121 LQHRSTPLPPPIPASSDAN-KKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQ 180

BLAST of HG10002389 vs. NCBI nr
Match: XP_023523257.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-29
Identity = 125/196 (63.78%), Postives = 136/196 (69.39%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERP +TLIFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP  
Sbjct: 1   MERPFSTLIFVISGFAFSILSLLVESQARDGAISSSSPP---PPPPSPPPPSPPPPPP-- 60

Query: 61  SPPPP--PPPPPPPPLPS--PSPPP--FSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPP 120
            PPPP  PP  PPPP P+  P PPP    PPPP    PPP   PPP    S+Q+R   PP
Sbjct: 61  -PPPPLSPPQSPPPPSPNFVPPPPPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPP 120

Query: 121 VPP-----------------NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVF 174
            PP                 NN +  +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVF
Sbjct: 121 SPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVF 180

BLAST of HG10002389 vs. ExPASy TrEMBL
Match: A0A0A0LC75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.0e-48
Identity = 145/176 (82.39%), Postives = 151/176 (85.80%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L
Sbjct: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTL-----SPPRPSSPPPSPSPPPPPL 60

Query: 61  SPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVPP 120
            PPPPPPPPPP   PP PSPSPPPFSPPPP PPP   RR+PPP  ASS++ +KK PPVPP
Sbjct: 61  PPPPPPPPPPPPITPPPPSPSPPPFSPPPP-PPPHRHRRNPPPPLASSVERKKKRPPVPP 120

Query: 121 NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
            NINTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 KNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170

BLAST of HG10002389 vs. ExPASy TrEMBL
Match: A0A1S3CKG6 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501988 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTL-----SPPMPSPPPPSPSPPPPPL 60

Query: 61  SPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSPPVPP 120
            PPPPPPPPPP    P PSPSPPPFSP PP PPP   RRSPPP  ASS++ +KK PPVPP
Sbjct: 61  PPPPPPPPPPPRIISPPPSPSPPPFSPSPP-PPPHRHRRSPPPPLASSMERKKKRPPVPP 120

Query: 121 NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
            NINTNQ SK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 KNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170

BLAST of HG10002389 vs. ExPASy TrEMBL
Match: A0A6J1KAI1 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111493162 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 6.2e-30
Identity = 133/205 (64.88%), Postives = 143/205 (69.76%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP L
Sbjct: 1   MERPLSTFIFVISGFAFSILSLLVESQARDGAISSSSPP---PPPPSPPPPSPPPPPPPL 60

Query: 61  SPP------------------PPPPPP---PPPPLPSPSPP---PFSPPPPFPPPPPP-- 120
           SPP                  PPPP P   PPPP+  P PP   P SPPP FPPPP P  
Sbjct: 61  SPPQSPPLSPPQSPPQSPPLSPPPPSPNFVPPPPIFVPPPPPASPSSPPPIFPPPPSPPS 120

Query: 121 --RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQ 174
              RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQ
Sbjct: 121 LQHRSTPLPPPIPASSDAN-KKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQ 180

BLAST of HG10002389 vs. ExPASy TrEMBL
Match: A0A6J1G9A4 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111452141 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29
Identity = 130/190 (68.42%), Postives = 139/190 (73.16%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
           MERP +TLIFVISGFAFS+LSLLVESQ +DGA  + SPP   PP PSPPPPSPPPPPP  
Sbjct: 1   MERPFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPP-PPPPPPSPPPPSPPPPPP-- 60

Query: 61  SPPPP--PPPPPPPPLPSPS----PPP--FSPPPPFPPPPPPRRS--------PPPSHAS 120
            PPPP  PP  PPPP PSP+    PPP   SPPPP  PPPP   S        PPP  AS
Sbjct: 61  -PPPPLSPPQSPPPPSPSPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPAS 120

Query: 121 SIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL 174
           S  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLL
Sbjct: 121 SDAN-KKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL 180

BLAST of HG10002389 vs. ExPASy TrEMBL
Match: A0A6J1DGD7 (proline-rich receptor-like protein kinase PERK9 OS=Momordica charantia OX=3673 GN=LOC111020262 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.3e-23
Identity = 112/179 (62.57%), Postives = 123/179 (68.72%), Query Frame = 0

Query: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPP-IPSPPPPSPPPPPPL 60
           MERPLTT IFVISGFAFS+LSLLVE Q QD  NS ++P   SPP +PSPPP         
Sbjct: 1   MERPLTTFIFVISGFAFSILSLLVECQPQDRPNSPVTP---SPPRLPSPPP--------- 60

Query: 61  LSPPPPPPPPPPPPLPSPSPPPFSPPPPFPPPPPPRR---SPPPSHASSIQNRK-KSPPV 120
            SP  PPP PP PP PSP  PP  PP P  PPPP RR   SPPPS ASS +N   +    
Sbjct: 61  RSPSLPPPSPPSPPQPSPLSPP--PPSPVSPPPPRRRRSSSPPPSRASSARNENPQLGGT 120

Query: 121 PPNNINTNQGSKQS-LNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 174
              N   NQ  K+S LNKGK+VGLFFVGIAAVLQ+CVVGFLVFKRRQLLR K++YE FS
Sbjct: 121 HKKNNKKNQAEKRSRLNKGKQVGLFFVGIAAVLQVCVVGFLVFKRRQLLRFKEQYESFS 165

BLAST of HG10002389 vs. TAIR 10
Match: AT1G54215.1 (proline-rich family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 80/174 (45.98%), Postives = 97/174 (55.75%), Query Frame = 0

Query: 9   IFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPP 68
           +F+++ F      LLV+SQ          PP+      SPPPP PPPPPP   PPPPPPP
Sbjct: 15  VFILALFFTIHCFLLVQSQ---------DPPLFP---QSPPPPPPPPPPP---PPPPPPP 74

Query: 69  PPPPP---------LPSPSPP------PFSPPPPFPPPPPPRRSPPPSHASSIQNRKKSP 128
           PPPPP         +P P PP      P S PP  PP PPPR  PPP      +N  +  
Sbjct: 75  PPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPP--PPQPPPRSQPPPKPPQ--KNLPRRH 134

Query: 129 PVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD 168
           P PP   +  +  +  LNKGK VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Sbjct: 135 PPPPR--SPEKPKRDGLNKGKTVGLVFVGLIAMLQVIVVVFLVFKRKQLLSLKD 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900729.12.3e-5085.96proline-rich receptor-like protein kinase PERK2 [Benincasa hispida][more]
XP_011651738.25.2e-4781.82LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus][more]
XP_008463997.12.6e-4681.82PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo][more]
XP_022998566.11.3e-2964.88leucine-rich repeat extensin-like protein 3 [Cucurbita maxima][more]
XP_023523257.12.2e-2963.78leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LC753.0e-4882.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1[more]
A0A1S3CKG61.3e-4681.82leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501... [more]
A0A6J1KAI16.2e-3064.88leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1G9A43.1e-2968.42leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1DGD73.3e-2362.57proline-rich receptor-like protein kinase PERK9 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
AT1G54215.11.4e-0545.98proline-rich family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 39..51
score: 44.62
coord: 51..72
score: 49.09
coord: 73..89
score: 44.71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..130
NoneNo IPR availablePANTHERPTHR36721:SF1PROLINE-RICH FAMILY PROTEINcoord: 1..172
NoneNo IPR availablePANTHERPTHR36721PROLINE-RICH FAMILY PROTEINcoord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002389.1HG10002389.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane