HG10002387 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002387
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr11: 6270335 .. 6270679 (-)
RNA-Seq ExpressionHG10002387
SyntenyHG10002387
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACGTCTGGTGTCGTCTATGGAGACGATTGGAATGATAGCAAGGTCGGTAACGACCAACCAGATTCGATGAAGATCAACAAGCGAGATTTTATGCCGCGGAGATGTCTTGAAGACTATTTATTGAATGAGAAAACACTGACGAAGGGGACACAACCATTTGCGACCTCGACTAGATTGCACCTAAGATCGAGTCTGACAAGGCATAACTCGTTCCCTAGTGGAAGACATGCCCAAAATGCAGAACCTCCCTACAGCCCCGATGCTGCAAGAATAGGGAAAGCCCCTGAAGACCTCCACCAAGACTTAAAGGGAAAACACTGGTTCCAACGTCTTCTTTAA

mRNA sequence

ATGCCAACGTCTGGTGTCGTCTATGGAGACGATTGGAATGATAGCAAGGTCGGTAACGACCAACCAGATTCGATGAAGATCAACAAGCGAGATTTTATGCCGCGGAGATGTCTTGAAGACTATTTATTGAATGAGAAAACACTGACGAAGGGGACACAACCATTTGCGACCTCGACTAGATTGCACCTAAGATCGAGTCTGACAAGGCATAACTCGTTCCCTAGTGGAAGACATGCCCAAAATGCAGAACCTCCCTACAGCCCCGATGCTGCAAGAATAGGGAAAGCCCCTGAAGACCTCCACCAAGACTTAAAGGGAAAACACTGGTTCCAACGTCTTCTTTAA

Coding sequence (CDS)

ATGCCAACGTCTGGTGTCGTCTATGGAGACGATTGGAATGATAGCAAGGTCGGTAACGACCAACCAGATTCGATGAAGATCAACAAGCGAGATTTTATGCCGCGGAGATGTCTTGAAGACTATTTATTGAATGAGAAAACACTGACGAAGGGGACACAACCATTTGCGACCTCGACTAGATTGCACCTAAGATCGAGTCTGACAAGGCATAACTCGTTCCCTAGTGGAAGACATGCCCAAAATGCAGAACCTCCCTACAGCCCCGATGCTGCAAGAATAGGGAAAGCCCCTGAAGACCTCCACCAAGACTTAAAGGGAAAACACTGGTTCCAACGTCTTCTTTAA

Protein sequence

MPTSGVVYGDDWNDSKVGNDQPDSMKINKRDFMPRRCLEDYLLNEKTLTKGTQPFATSTRLHLRSSLTRHNSFPSGRHAQNAEPPYSPDAARIGKAPEDLHQDLKGKHWFQRLL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002387.1HG10002387.1mRNA