HG10002376 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002376
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAnkyrin repeat-containing protein
LocationChr11: 6166192 .. 6166782 (-)
RNA-Seq ExpressionHG10002376
SyntenyHG10002376
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAAAGTAAAAGAAGAGGAGAATCCAAGAAGCTGACAAGAGGGCGAAGGGAGACTTGGAAGAAGAATCTAAAATACAAAGGAGATTGGCTCCAAGAAGTGCAAGGCACATTAATGTTAGTAGCGACCGAGATCGCGACTGTGACGTTTCAAGGCGCAATCAACCCTCCTGGGGGAACTTGGCAGCAAGATCATGTCATTGAACTTCAAGATGCAGGAACTGCAATAATGGCATCCAAATCTTTCCGAACCTACATAAGTTACTTCATGGCAAATTCAATCTCATTCCTTGCATCAGTCAGTGTCATTCTATTGATAGTCAGTGGTTTTCCTTTGAAAAACAGGATTTTTGGTTGGTTGTTATCAGTAGCCATGACTGTTGCCGTTTCATGCTTAACATTTGCATATATAAATGGAACGGCTATGGTTTGTGGGAACAAAACTGCTCAAAGTTACTTATTGGTTTCGCTTCGCGTTTGGTATGGGATGGTTGGGCTGGTTATTCTTTGTTGCATTGTATTACCCTTTTTCATTTGGTTCCTCAAGAAGTTCCTTCGCATATTCACCACCTTTAGACATATAAATTAG

mRNA sequence

ATGCAACAAAGTAAAAGAAGAGGAGAATCCAAGAAGCTGACAAGAGGGCGAAGGGAGACTTGGAAGAAGAATCTAAAATACAAAGGAGATTGGCTCCAAGAAGTGCAAGGCACATTAATGTTAGTAGCGACCGAGATCGCGACTGTGACGTTTCAAGGCGCAATCAACCCTCCTGGGGGAACTTGGCAGCAAGATCATGTCATTGAACTTCAAGATGCAGGAACTGCAATAATGGCATCCAAATCTTTCCGAACCTACATAAGTTACTTCATGGCAAATTCAATCTCATTCCTTGCATCAGTCAGTGTCATTCTATTGATAGTCAGTGGTTTTCCTTTGAAAAACAGGATTTTTGGTTGGTTGTTATCAGTAGCCATGACTGTTGCCGTTTCATGCTTAACATTTGCATATATAAATGGAACGGCTATGGTTTGTGGGAACAAAACTGCTCAAAGTTACTTATTGGTTTCGCTTCGCGTTTGGTATGGGATGGTTGGGCTGGTTATTCTTTGTTGCATTGTATTACCCTTTTTCATTTGGTTCCTCAAGAAGTTCCTTCGCATATTCACCACCTTTAGACATATAAATTAG

Coding sequence (CDS)

ATGCAACAAAGTAAAAGAAGAGGAGAATCCAAGAAGCTGACAAGAGGGCGAAGGGAGACTTGGAAGAAGAATCTAAAATACAAAGGAGATTGGCTCCAAGAAGTGCAAGGCACATTAATGTTAGTAGCGACCGAGATCGCGACTGTGACGTTTCAAGGCGCAATCAACCCTCCTGGGGGAACTTGGCAGCAAGATCATGTCATTGAACTTCAAGATGCAGGAACTGCAATAATGGCATCCAAATCTTTCCGAACCTACATAAGTTACTTCATGGCAAATTCAATCTCATTCCTTGCATCAGTCAGTGTCATTCTATTGATAGTCAGTGGTTTTCCTTTGAAAAACAGGATTTTTGGTTGGTTGTTATCAGTAGCCATGACTGTTGCCGTTTCATGCTTAACATTTGCATATATAAATGGAACGGCTATGGTTTGTGGGAACAAAACTGCTCAAAGTTACTTATTGGTTTCGCTTCGCGTTTGGTATGGGATGGTTGGGCTGGTTATTCTTTGTTGCATTGTATTACCCTTTTTCATTTGGTTCCTCAAGAAGTTCCTTCGCATATTCACCACCTTTAGACATATAAATTAG

Protein sequence

MQQSKRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQDHVIELQDAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKNRIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVLPFFIWFLKKFLRIFTTFRHIN
Homology
BLAST of HG10002376 vs. NCBI nr
Match: KAE8651283.1 (hypothetical protein Csa_001787 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 153/210 (72.86%), Postives = 168/210 (80.00%), Query Frame = 0

Query: 1   MQQSKRR-GESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPG 60
           +QQSKRR G SKK  +G+ + WKKNLKYKGDWLQEVQGTLMLVAT IATVTFQGAINPPG
Sbjct: 236 IQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPG 295

Query: 61  GTWQQDHVI-------------ELQDAGTAIMASKSFRTYISYFMANSISFLASVSVILL 120
           GTWQQD  +             E+QD GTAIMA KS + Y SYF++NSISF ASVSVILL
Sbjct: 296 GTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILL 355

Query: 121 IVSGFPLKNRIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVG 180
           IVSGFPLKN+IF WLL+VAMT+AV  LTFAYINGTAMV  NKTAQSYLL  L VWYG+VG
Sbjct: 356 IVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG 415

Query: 181 LVILCCIVLPFFIWFLKKFLRIFTTFRHIN 197
           LVIL CI+LPFFIW LKKFLRI   F +IN
Sbjct: 416 LVILGCIILPFFIWLLKKFLRILVVFGYIN 445

BLAST of HG10002376 vs. NCBI nr
Match: XP_023526884.1 (uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-60
Identity = 133/195 (68.21%), Postives = 150/195 (76.92%), Query Frame = 0

Query: 5   KRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQ 64
           KRR       RG  E WK +LKYKGDWLQEVQGTLMLVAT IATVTFQGAI+PPGG WQQ
Sbjct: 71  KRRKRVSNQKRGWWEIWKNSLKYKGDWLQEVQGTLMLVATVIATVTFQGAIDPPGGIWQQ 130

Query: 65  DHVIELQ---------DAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKN 124
           D +               GTAIMA KS   YI YFMANSISFLASVSVILLIVSGFPLKN
Sbjct: 131 DVLTNCSWKQGTEVHAQVGTAIMACKSLYVYIRYFMANSISFLASVSVILLIVSGFPLKN 190

Query: 125 RIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVL 184
           R+FG LL++AM VAV+CL FAY+ G+AMV GN+T+QSYL V LRVWYG+VGLV LCC+++
Sbjct: 191 RVFGGLLTLAMCVAVACLAFAYVCGSAMVNGNQTSQSYLWVLLRVWYGIVGLVTLCCVII 250

Query: 185 PFFIWFLKKFLRIFT 191
           PF IW +K F+RIFT
Sbjct: 251 PFLIWAVKTFVRIFT 265

BLAST of HG10002376 vs. NCBI nr
Match: XP_022956269.1 (uncharacterized protein LOC111458021 [Cucurbita moschata])

HSP 1 Score: 241.9 bits (616), Expect = 4.6e-60
Identity = 133/195 (68.21%), Postives = 149/195 (76.41%), Query Frame = 0

Query: 5   KRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQ 64
           KRR       RG  E WK +LKYKGDWLQEVQGTLMLVAT IATVTFQGAI+PPGG WQQ
Sbjct: 71  KRRKRVSNQKRGWWEIWKNSLKYKGDWLQEVQGTLMLVATVIATVTFQGAIDPPGGIWQQ 130

Query: 65  DHVIELQ---------DAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKN 124
           D                 GTAIMA KS   YI YFMANSISFLASVSVILLIVSGFPLKN
Sbjct: 131 DVWTNCSWKQGTEVHAQVGTAIMACKSLYVYIRYFMANSISFLASVSVILLIVSGFPLKN 190

Query: 125 RIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVL 184
           R+FG LL++AM VAV+CL FAY+ G+AMV GN+T+QSYL V LRVWYG+VGLV LCC+++
Sbjct: 191 RVFGGLLTLAMCVAVACLAFAYVCGSAMVNGNQTSQSYLWVLLRVWYGIVGLVTLCCVII 250

Query: 185 PFFIWFLKKFLRIFT 191
           PF IW +K F+RIFT
Sbjct: 251 PFLIWAVKTFVRIFT 265

BLAST of HG10002376 vs. NCBI nr
Match: KAG6581822.1 (hypothetical protein SDJN03_21824, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 132/192 (68.75%), Postives = 148/192 (77.08%), Query Frame = 0

Query: 5   KRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQ 64
           KRR       RGR E WK +LKYKGDWLQEVQGTLMLVAT IATVTFQGAI+PPGG WQQ
Sbjct: 101 KRRKRVSNQKRGRWEIWKNSLKYKGDWLQEVQGTLMLVATVIATVTFQGAIDPPGGIWQQ 160

Query: 65  DHVIELQ---------DAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKN 124
           D +              AGTAIMA KS + YI YFMANSISFLASVSVIL+IVSGFPLKN
Sbjct: 161 DVLTNCSWKQGTEVHAQAGTAIMACKSLQIYIRYFMANSISFLASVSVILMIVSGFPLKN 220

Query: 125 RIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVL 184
           RIFG LL++AM VAV+CL FAY+ G AMV  N+T+QSYLLV LRVWYG+VGLV LCCI++
Sbjct: 221 RIFGGLLTLAMCVAVACLAFAYVCGFAMVSANQTSQSYLLVLLRVWYGIVGLVTLCCIII 280

Query: 185 PFFIWFLKKFLR 188
           PF IW  K F++
Sbjct: 281 PFLIWVAKIFVQ 292

BLAST of HG10002376 vs. NCBI nr
Match: KAG6581824.1 (hypothetical protein SDJN03_21826, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-59
Identity = 131/193 (67.88%), Postives = 149/193 (77.20%), Query Frame = 0

Query: 5   KRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQ 64
           KRR       RGR E WK +LKYKGDWLQEVQGTLMLVAT IA VTFQGAI+PPGG WQ+
Sbjct: 101 KRRKRVSNQKRGRWEIWKNSLKYKGDWLQEVQGTLMLVATVIAIVTFQGAIDPPGGIWQR 160

Query: 65  DHVIELQ---------DAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKN 124
           D +   +          AGTAIMA KS + YI YFMANSISFLASVSVILLIVSGFPLKN
Sbjct: 161 DVLTNCRWKQGTEVHAQAGTAIMACKSLQIYIRYFMANSISFLASVSVILLIVSGFPLKN 220

Query: 125 RIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVL 184
           R+FG LL++AM VAV+CL +AY+ G AMV  N+T+QSYLLV LRVWYG+VGLV LCCI++
Sbjct: 221 RVFGGLLTLAMCVAVACLAYAYVCGFAMVSANQTSQSYLLVLLRVWYGIVGLVTLCCIII 280

Query: 185 PFFIWFLKKFLRI 189
           PF IW  K F+RI
Sbjct: 281 PFIIWVAKAFIRI 293

BLAST of HG10002376 vs. ExPASy TrEMBL
Match: A0A0A0LGA6 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.2e-71
Identity = 153/210 (72.86%), Postives = 168/210 (80.00%), Query Frame = 0

Query: 1   MQQSKRR-GESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPG 60
           +QQSKRR G SKK  +G+ + WKKNLKYKGDWLQEVQGTLMLVAT IATVTFQGAINPPG
Sbjct: 26  IQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPG 85

Query: 61  GTWQQDHVI-------------ELQDAGTAIMASKSFRTYISYFMANSISFLASVSVILL 120
           GTWQQD  +             E+QD GTAIMA KS + Y SYF++NSISF ASVSVILL
Sbjct: 86  GTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILL 145

Query: 121 IVSGFPLKNRIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVG 180
           IVSGFPLKN+IF WLL+VAMT+AV  LTFAYINGTAMV  NKTAQSYLL  L VWYG+VG
Sbjct: 146 IVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG 205

Query: 181 LVILCCIVLPFFIWFLKKFLRIFTTFRHIN 197
           LVIL CI+LPFFIW LKKFLRI   F +IN
Sbjct: 206 LVILGCIILPFFIWLLKKFLRILVVFGYIN 235

BLAST of HG10002376 vs. ExPASy TrEMBL
Match: A0A6J1GYJ8 (uncharacterized protein LOC111458021 OS=Cucurbita moschata OX=3662 GN=LOC111458021 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.3e-60
Identity = 133/195 (68.21%), Postives = 149/195 (76.41%), Query Frame = 0

Query: 5   KRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQ 64
           KRR       RG  E WK +LKYKGDWLQEVQGTLMLVAT IATVTFQGAI+PPGG WQQ
Sbjct: 71  KRRKRVSNQKRGWWEIWKNSLKYKGDWLQEVQGTLMLVATVIATVTFQGAIDPPGGIWQQ 130

Query: 65  DHVIELQ---------DAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKN 124
           D                 GTAIMA KS   YI YFMANSISFLASVSVILLIVSGFPLKN
Sbjct: 131 DVWTNCSWKQGTEVHAQVGTAIMACKSLYVYIRYFMANSISFLASVSVILLIVSGFPLKN 190

Query: 125 RIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVL 184
           R+FG LL++AM VAV+CL FAY+ G+AMV GN+T+QSYL V LRVWYG+VGLV LCC+++
Sbjct: 191 RVFGGLLTLAMCVAVACLAFAYVCGSAMVNGNQTSQSYLWVLLRVWYGIVGLVTLCCVII 250

Query: 185 PFFIWFLKKFLRIFT 191
           PF IW +K F+RIFT
Sbjct: 251 PFLIWAVKTFVRIFT 265

BLAST of HG10002376 vs. ExPASy TrEMBL
Match: A0A1S4E4H6 (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103502000 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.8e-40
Identity = 96/143 (67.13%), Postives = 110/143 (76.92%), Query Frame = 0

Query: 1   MQQSKRRGES--KKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPP 60
           +Q SKRR ES  KK  +G+ + WKKNLKYKGDW +EVQGTLMLVAT IATVTFQGAINPP
Sbjct: 249 IQISKRREESSKKKKRKGQWQIWKKNLKYKGDWQKEVQGTLMLVATVIATVTFQGAINPP 308

Query: 61  GGTWQQDHV-------------IELQDAGTAIMASKSFRTYISYFMANSISFLASVSVIL 120
           GGTWQQD               +E+QD GTAIMA KS + Y SYF++NSISF AS+SVIL
Sbjct: 309 GGTWQQDQEFTSCRWKQEGPAHMEIQDVGTAIMACKSVQIYTSYFISNSISFFASISVIL 368

Query: 121 LIVSGFPLKNRIFGWLLSVAMTV 129
           LIVSGFPLKN+IF W L+VAMT+
Sbjct: 369 LIVSGFPLKNKIFRWFLTVAMTI 391

BLAST of HG10002376 vs. ExPASy TrEMBL
Match: A0A5A7UTG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00400 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-33
Identity = 94/176 (53.41%), Postives = 105/176 (59.66%), Query Frame = 0

Query: 1   MQQSKRRGES--KKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPP 60
           +Q SKRR ES  KK  +G+ + WKKNLKYKGDW +EVQGTLMLVAT IATVTFQGAINPP
Sbjct: 241 IQISKRREESSKKKKRKGQWQIWKKNLKYKGDWQKEVQGTLMLVATVIATVTFQGAINPP 300

Query: 61  GGTWQQDHV-------------IELQDAGTAIMASKSFRTYISYFMANSISFLASVSVIL 120
           GGTWQQD               +E+QD GTAIMA KS + Y                   
Sbjct: 301 GGTWQQDQEFTSCRWKQEGPAHMEIQDVGTAIMACKSVQIY------------------- 360

Query: 121 LIVSGFPLKNRIFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVW 162
                            ++AMT+AV  LTFAYI GTAMVCGNKTAQSYLL  L VW
Sbjct: 361 -----------------TIAMTIAVVFLTFAYITGTAMVCGNKTAQSYLLDLLHVW 380

BLAST of HG10002376 vs. ExPASy TrEMBL
Match: A0A6J1IU53 (ankyrin repeat-containing protein NPR4-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479945 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-32
Identity = 92/195 (47.18%), Postives = 122/195 (62.56%), Query Frame = 0

Query: 4   SKRRGESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQ 63
           +K+R ES     GR +TW+K LKYKGDW+QEVQG +MLVAT IATVTFQ  +NP GG WQ
Sbjct: 188 TKQRRESASFRVGRWKTWRKKLKYKGDWVQEVQGIMMLVATVIATVTFQAGVNPAGGVWQ 247

Query: 64  QDHVIE-------LQDAGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKNR 123
           QD           +  AG+AIMA +    Y+ Y +AN +SF+ASVSVILLI+S  PLKNR
Sbjct: 248 QDTPYSATVKNGTILPAGSAIMAYRRPLDYLIYSIANVVSFMASVSVILLIISRVPLKNR 307

Query: 124 IFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVLP 183
           +  W+L +AM  AV  L  A++ G  MV      Q   ++   + +G+VGLV L  ++  
Sbjct: 308 VCSWVLVLAMCAAVVFLALAFLQGFIMVNLEPLDQLPAVMGYYLAFGLVGLVGLIHLI-R 367

Query: 184 FFIWFLKKFLRIFTT 192
           F +W +K  L  FT+
Sbjct: 368 FLVWAVKSLLCCFTS 381

BLAST of HG10002376 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 64/190 (33.68%), Postives = 105/190 (55.26%), Query Frame = 0

Query: 9   ESKKLTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQDHVI 68
           E  +      E + K LK +GDWL++ +G LM+ AT IA ++FQ  +NPPGG WQ D+  
Sbjct: 7   EGHRYEESSSEWFVKYLKRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDNCS 66

Query: 69  ELQD----------AGTAIMASKSFR--TYISYFMANSISFLASVSVILLIVSGFPLKNR 128
                         AGTA++  +S +   YI   +++++SF  S+S+ILL++SG  L+NR
Sbjct: 67  FGNQTGTAPFCKGRAGTAVLEYESSKRIAYIGMIISSTVSFSTSMSLILLVISGIRLRNR 126

Query: 129 IFGWLLSVAMTVAVSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIVLP 187
           +   +L   M VAV C++ A+     +V  +     Y+L+ + V + +V  V++  I L 
Sbjct: 127 MIMAILGTFMVVAVLCISAAFFFAIVLVQSDDQIIRYILL-IYVGFWVVFPVLILLIQLV 186

BLAST of HG10002376 vs. TAIR 10
Match: AT4G13266.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-14
Identity = 53/176 (30.11%), Postives = 93/176 (52.84%), Query Frame = 0

Query: 25  LKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQDHVIELQDA----------- 84
           L ++GDWL++ +G L++ AT IA ++F   +NPPGG WQ +                   
Sbjct: 25  LDHQGDWLEKTRGNLVVAATVIAAMSFGVMVNPPGGVWQSEDCSSKGQTTFQTRTCEGKL 84

Query: 85  GTAIMASKSFRT--YISYFMANSISFLASVSVILLIVSGFPLKNRIFGWLLSVAMTVAVS 144
           GT+I+     +   Y+   ++N +SF AS+ +I L++ GF  +NR+   ++ + M VAV 
Sbjct: 85  GTSILEHNPSKRIFYLGMVISNLVSFSASMGIIFLVIIGFRFRNRLIMTIMVMFMVVAVL 144

Query: 145 CLTFAYINGTAMV-CGNKTAQSYLLVSLRVWYGMVGLVILCCIVLPFFIWFLKKFL 187
           C++ A+     +V   +   +  L + L  W  +  LVIL  I L  F+W++ +F+
Sbjct: 145 CISAAFFFAAGLVQHEDDFIEKILQIYLGFWVLLPVLVIL--IQLVRFLWWVIRFI 198

BLAST of HG10002376 vs. TAIR 10
Match: AT5G50140.1 (Ankyrin repeat family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 46/174 (26.44%), Postives = 85/174 (48.85%), Query Frame = 0

Query: 13  LTRGRRETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQDHVIELQD 72
           +  G RE+  K  + + + LQ  + T+ +VA  IA+VTF   +NPPGG +Q  H I    
Sbjct: 341 IRHGLRESRIKEKEMQSEALQNARNTITVVAVLIASVTFTCGLNPPGGVYQDGHFIGKAT 400

Query: 73  AGTAIMASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKNRIFGWLLSVA---MTVA 132
           AG  +        +  + ++NSI+   S+ +++L++S  P + +     L +    + +A
Sbjct: 401 AGGTV-------AFKVFSVSNSIALFTSLCIVILLLSIIPFRTKSLKTFLIITHKMIWLA 460

Query: 133 VSCLTFAYINGTAMVCGNKTAQSYLLVSLRVWYGMVGLVILCCIV--LPFFIWF 182
           V  +  AY+ GT +   +     ++L +         LVI C ++  +  F+WF
Sbjct: 461 VIAMASAYVAGTCVTLPHSRGNKWVLKAT--------LVIACVMLGGMFIFLWF 499

BLAST of HG10002376 vs. TAIR 10
Match: AT5G51160.1 (Ankyrin repeat family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 29/95 (30.53%), Postives = 50/95 (52.63%), Query Frame = 0

Query: 34  EVQGTLMLVATEIATVTFQGAINPPGGTWQQDHV--------------IELQDAGTAIMA 93
           E +  L++VA+ +AT TFQ ++ PPGGTWQ   +               +   AG +IM 
Sbjct: 269 EARSALLVVASLVATATFQASLTPPGGTWQDSSIPAVSQNTTNVNTTNQQAHTAGQSIMG 328

Query: 94  SKSFRTYISYFMANSISFLASVSVILLIVSGFPLK 115
           + +   +  +   N+I F  S+S++ ++  GFPL+
Sbjct: 329 TFNGVAFTLFVFFNTIGFSVSLSMLNILTLGFPLR 363

BLAST of HG10002376 vs. TAIR 10
Match: AT5G54700.1 (Ankyrin repeat family protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07
Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 0

Query: 19  ETWKKNLKYKGDWLQEVQGTLMLVATEIATVTFQGAINPPGGTWQQDHVIELQDAGTAIM 78
           E+ K+      + LQ  + T+ +VA  IA+VTF   +NPPGG +Q+    + +      +
Sbjct: 197 ESHKEESVMHSEALQNARNTITVVAILIASVTFAVGMNPPGGIYQESTSSKGKSVAAKTV 256

Query: 79  ASKSFRTYISYFMANSISFLASVSVILLIVSGFPLKNRIFGWLLSVA---MTVAVSCLTF 138
           A K F      +++NSI+   S+ +++L+VS  P K +    +L +    M+V+V+ L  
Sbjct: 257 AFKIF------YVSNSIALFTSLWIVILLVSIIPFKPKSLKNVLVITHKMMSVSVAALAT 313

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8651283.11.7e-7072.86hypothetical protein Csa_001787 [Cucumis sativus][more]
XP_023526884.11.6e-6068.21uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo][more]
XP_022956269.14.6e-6068.21uncharacterized protein LOC111458021 [Cucurbita moschata][more]
KAG6581822.11.0e-5968.75hypothetical protein SDJN03_21824, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6581824.11.4e-5967.88hypothetical protein SDJN03_21826, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LGA68.2e-7172.86PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV... [more]
A0A6J1GYJ82.3e-6068.21uncharacterized protein LOC111458021 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A1S4E4H69.8e-4067.13ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5A7UTG82.3e-3353.41Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A6J1IU533.4e-3247.18ankyrin repeat-containing protein NPR4-like isoform X3 OS=Cucurbita maxima OX=36... [more]
Match NameE-valueIdentityDescription
AT3G13950.11.4e-1733.68unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G13266.12.4e-1430.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G50140.11.5e-0826.44Ankyrin repeat family protein [more]
AT5G51160.11.7e-0730.53Ankyrin repeat family protein [more]
AT5G54700.18.3e-0729.27Ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 30..143
e-value: 1.2E-24
score: 86.4
NoneNo IPR availablePANTHERPTHR24177:SF294SUBFAMILY NOT NAMEDcoord: 11..152
NoneNo IPR availablePANTHERPTHR24177CASKINcoord: 11..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002376.1HG10002376.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane