HG10002348 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002348
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nucleolin 1
Location	Chr11: 5865985 .. 5867324 (-)
RNA-Seq Expression	HG10002348
Synteny	HG10002348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAGCCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCGGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAGTATCTCGTCGTCATATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCCAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTTGAATTAAACAAAATCGCTGAATTTGAAGAAGGGGAGCAATTTTTTTCGCGTTCTTCTGATTCTGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGGTTTGGCCCCGAAAACCTATATAATTTTCCTGATAGAATTTAGAGGAAAGTAATCGAAACCATCACTTTTCCAGATTGTTAGCAGATTACGCCTAGGGTTTTGATAATCAAAAGTAAAAATAGGCAATACTACAAAGAAAAAATGATAAAATTGTTTTAAGAGTTTCAAATTGTGAATCGATGATACTGATTGTTCTTACTTTTCCGTCAGAATTTGGTTTTCTTGTAGTGGGACACGAATTTGAATCCTGTCAAATGTATGCTCTCGAAAATCTTTCTACTTTTCCCGAGAAAATTTAGAGAAAAATAATTGGAATCATCACTTTTCCAGATTGTTTACATATCCTGCGTAGGATTTTAACAAAATTAGGAGTTACTTAAGAGAACAAACGACAAAATTGTTATAGAAGTTCCAAATTGTGAATTGATGATACTGATTGTTCTAACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATACGTGATGCAAAAAAATGGGACTGGTTTTTGGATGAGCCGAGAAAAGAAAGTGATGGTGATGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGGAAAAAAGGAGCAAACAATGATGATGAAGATTGGACAGATGAGAATGAAGATGCTATGGAAATGATTACAAAAACAAAGAAGTTTCAAAGACCCAAATACTCCACAAGATCAAAAGATGGCAAAAAGACTCACAAGGATCAAAGGAATGCTGCTAAATCTAATAAAGACTATAATAAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAATGTAGAACTGATGGACGAAGATGAAGAAGAAGAAGAATTTTCTGACGATGACGAGGAGGAGGAGGAGGATTGA

mRNA sequence

ATGGAGATAGCCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCGGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAGTATCTCGTCGTCATATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCCAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTTGAATTAAACAAAATCGCTGAATTTGAAGAAGGGGAGCAATTTTTTTCGCGTTCTTCTGATTCTGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTCGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATACGTGATGCAAAAAAATGGGACTGGTTTTTGGATGAGCCGAGAAAAGAAAGTGATGGTGATGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGGAAAAAAGGAGCAAACAATGATGATGAAGATTGGACAGATGAGAATGAAGATGCTATGGAAATGATTACAAAAACAAAGAAGTTTCAAAGACCCAAATACTCCACAAGATCAAAAGATGGCAAAAAGACTCACAAGGATCAAAGGAATGCTGCTAAATCTAATAAAGACTATAATAAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAATGTAGAACTGATGGACGAAGATGAAGAAGAAGAAGAATTTTCTGACGATGACGAGGAGGAGGAGGAGGATTGA

Coding sequence (CDS)

ATGGAGATAGCCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCGGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAGTATCTCGTCGTCATATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCCAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTTGAATTAAACAAAATCGCTGAATTTGAAGAAGGGGAGCAATTTTTTTCGCGTTCTTCTGATTCTGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTCGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATACGTGATGCAAAAAAATGGGACTGGTTTTTGGATGAGCCGAGAAAAGAAAGTGATGGTGATGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGGAAAAAAGGAGCAAACAATGATGATGAAGATTGGACAGATGAGAATGAAGATGCTATGGAAATGATTACAAAAACAAAGAAGTTTCAAAGACCCAAATACTCCACAAGATCAAAAGATGGCAAAAAGACTCACAAGGATCAAAGGAATGCTGCTAAATCTAATAAAGACTATAATAAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAATGTAGAACTGATGGACGAAGATGAAGAAGAAGAAGAATTTTCTGACGATGACGAGGAGGAGGAGGAGGATTGA

Protein sequence

MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFEVIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFSRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYGRKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRNAAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEEEED

Homology

[Close]

BLAST of HG10002348 vs. NCBI nr
Match: XP_038898830.1 (protein PIF [Benincasa hispida])

HSP 1 Score: 496.9 bits (1278), Expect = 1.2e-136
Identity = 261/296 (88.18%), Postives = 274/296 (92.57%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAP+EP VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPIEPTVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKG+MA GESFCVG QEPIWFELNKIAEFEE +QFFS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGEMALGESFCVGSQEPIWFELNKIAEFEERKQFFS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLDEPRK+SD DEDYG
Sbjct: 121 RSSDSVDIDVSGIDPVKEFGFLAMGHEFECYGNRVIRDPKKWDWFLDEPRKDSDDDEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RKKKRGV+GKRKKGAN+DDEDWTDENEDA+EMITKTKKF+RPKYSTRSKD  KT  DQ+ 
Sbjct: 181 RKKKRGVKGKRKKGANSDDEDWTDENEDAVEMITKTKKFRRPKYSTRSKDRHKTPNDQKK 240

Query: 241 AAKSNKDYN---KEDEDDETLGGFIVDDEVDNVELM----DEDEEEEEFSDDDEEE 290
           AA+SNKDY+   +EDEDDETLGGFIVDDE DNVE M    DEDEEEEEFSDDDEE+
Sbjct: 241 AARSNKDYDEEVEEDEDDETLGGFIVDDEEDNVEQMDEDEDEDEEEEEFSDDDEED 296

[Close]

BLAST of HG10002348 vs. NCBI nr
Match: KAG7018280.1 (hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.1 bits (1276), Expect = 2.0e-136
Identity = 253/289 (87.54%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFA KDRTVSRRHILI+AKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQE +WFELNKI EFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           R SDSEDIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK+SD DEDYG
Sbjct: 121 RCSDSEDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSDDDEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+EMITKTKKFQRPKYSTRSKD  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDSNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKSNKDY +EDEDDETLGGFIVDDEVDN ELMDEDE+EEEFSDD+E++
Sbjct: 241 AAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDEEDD 289

[Close]

BLAST of HG10002348 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 494.6 bits (1272), Expect = 5.9e-136
Identity = 252/289 (87.20%), Postives = 269/289 (93.08%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFA KDRTVSR HILI+AKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK+SD +EDYG
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSDDEEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+EMITKTKKFQRPKYSTRSKD  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKSNKDY +EDEDDETLGGFIVDDEVDN ELMDEDE+EEEFSDD E++
Sbjct: 241 AAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKEDD 289

[Close]

BLAST of HG10002348 vs. NCBI nr
Match: XP_023526483.1 (protein BFR2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 1.7e-135
Identity = 252/289 (87.20%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLV REPVTIFGRGSGFA KDRTVSRRHILIEAKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVPREPVTIFGRGSGFACKDRTVSRRHILIEAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQE +WFELNKI EFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRCSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDSEDIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDEPRK+SD DEDYG
Sbjct: 121 RSSDSEDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+ MITKTKKFQRPKYSTRSKD  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVGMITKTKKFQRPKYSTRSKDSNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKS+KDY +EDEDDETLGGFIVDDEVDN ELM+EDE+EEEFSDD+E++
Sbjct: 241 AAKSSKDYVEEDEDDETLGGFIVDDEVDNEELMNEDEDEEEFSDDEEDD 289

[Close]

BLAST of HG10002348 vs. NCBI nr
Match: XP_022955501.1 (uncharacterized protein LOC111457508 [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 2.9e-135
Identity = 250/289 (86.51%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVT FGRGSGFA KDRTVSRRHILI+AKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK+SD DEDYG
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEWRKDSDDDEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+EMITKTKKFQRP+YSTRS D  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPQYSTRSNDSNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKSNKDY +EDEDDETLGGFIVDDEVDN ELMDEDE+EEEFSD +E++
Sbjct: 241 AAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDGEEDD 289

[Close]

BLAST of HG10002348 vs. ExPASy TrEMBL
Match: A0A6J1J012 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.9e-136
Identity = 252/289 (87.20%), Postives = 269/289 (93.08%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFA KDRTVSR HILI+AKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK+SD +EDYG
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSDDEEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+EMITKTKKFQRPKYSTRSKD  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKSNKDY +EDEDDETLGGFIVDDEVDN ELMDEDE+EEEFSDD E++
Sbjct: 241 AAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKEDD 289

[Close]

BLAST of HG10002348 vs. ExPASy TrEMBL
Match: A0A6J1GTX9 (uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC111457508 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 250/289 (86.51%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVT FGRGSGFA KDRTVSRRHILI+AKTSENSNG PMEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIG+NPIWVRS KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+  S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGDEDYG 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK+SD DEDYG
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEWRKDSDDDEDYG 180

Query: 181 RKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQRN 240
           RK+K  VRGKRKKGANNDDEDWTDENEDA+EMITKTKKFQRP+YSTRS D  KTHKDQ+ 
Sbjct: 181 RKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPQYSTRSNDSNKTHKDQKK 240

Query: 241 AAKSNKDYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEE 290
           AAKSNKDY +EDEDDETLGGFIVDDEVDN ELMDEDE+EEEFSD +E++
Sbjct: 241 AAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDGEEDD 289

[Close]

BLAST of HG10002348 vs. ExPASy TrEMBL
Match: A0A0A0LFR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 255/295 (86.44%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRT+SRRHILIEAKTSEN+NGAPMEP+VSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKIAEFEEG+Q FS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKESDGD-EDY 180
           RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K+SD D EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180

Query: 181 GRKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQR 240
            RKKKRGV GKRKKG N+DDEDWTDENEDA+EMITK +K QRPKYSTRSKD  K   DQR
Sbjct: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 NAAKSNKDYN---KEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEEEE 292
            AAKSNK+YN   +EDEDDETLGGFIVDDEVDNVE MDEDEEEEEF DD+E+EE+
Sbjct: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295

[Close]

BLAST of HG10002348 vs. ExPASy TrEMBL
Match: A0A5D3BXV5 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132
Identity = 252/294 (85.71%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRT+SRRHILIEAKTS+N+NGAPMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKG+MAPGESFCVGGQEPIWFELNKI EFEEG+   S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKES-DGDEDY 180
           RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K+S D DEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 GRKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQR 240
            RKKKRGVRGKRKKGAN+DDEDWTDENEDA++MITK +K QRPKYSTRSKD  K   DQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 NAAKSNKDYN---KEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEEE 291
            AAKSNKDY+   +EDEDDETLGGFIVDDEVDNVE MDEDEEEE   D+D+EE+
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

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BLAST of HG10002348 vs. ExPASy TrEMBL
Match: A0A1S3BHB4 (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132
Identity = 252/294 (85.71%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRT+SRRHILIEAKTS+N+NGAPMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQFFS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKG+MAPGESFCVGGQEPIWFELNKI EFEEG+   S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKES-DGDEDY 180
           RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K+S D DEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 GRKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKDQR 240
            RKKKRGVRGKRKKGAN+DDEDWTDENEDA++MITK +K QRPKYSTRSKD  K   DQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 NAAKSNKDYN---KEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDEEEE 291
            AAKSNKDY+   +EDEDDETLGGFIVDDEVDNVE MDEDEEEE   D+D+EE+
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

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BLAST of HG10002348 vs. TAIR 10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.4e-57
Identity = 140/305 (45.90%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPV-TIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPMEPRVSF 60
           MEI GEDG+KL L+  V  +FGRG+GF ++D TVSRRH+ +  K +  + G      VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVRSSKNG-EIRTFRRSEKGQMAPGESFCVGGQEPIWFELNKIAEFEEGEQF 120
           EV+GRNP+W+R+ + G +I+T R+ E G++A G+ FCV G  PIWF L +  E  E    
Sbjct: 74  EVLGRNPVWIRAVEKGKKIQTLRKPETGEIATGDQFCVSGNHPIWFTLKRRDEVME---- 133

Query: 121 FSRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFL-DEPRKESDGDE 180
             R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD K+W+WFL D     SDGDE
Sbjct: 134 -ERALDHGEIELN-IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLEDSTNGNSDGDE 193

Query: 181 DYGRKKKRGVRGKRKKGANNDDEDWTDENEDAMEMITKTKKFQRPKYSTRSKDGKKTHKD 240
           D  +K ++G+  KR++   N+D+DW+ E+++  E++ K+K+   P YSTRS   KKT KD
Sbjct: 194 DGDKKGRKGLGKKRRRKKGNEDDDWSVESDEDKELMVKSKRVVTPTYSTRS---KKTKKD 253

Query: 241 QRNAAKSNK----------DYNKEDEDDETLGGFIVDDEVDNVELMDEDEEEEEFSDDDE 293
              ++ S+           D  +ED+DDETLGGFIV DE   +E   E+EEEE+ SD D+
Sbjct: 254 SNASSSSSNGAQTKQRGRADVEEEDDDDETLGGFIVSDEEAKLE---EEEEEEDESDVDD 304

The following BLAST results are available for this feature:

BLAST of HG10002348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898830.1	1.2e-136	88.18	protein PIF [Benincasa hispida]	[more]
KAG7018280.1	2.0e-136	87.54	hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022980683.1	5.9e-136	87.20	protein BFR2 [Cucurbita maxima]	[more]
XP_023526483.1	1.7e-135	87.20	protein BFR2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955501.1	2.9e-135	86.51	uncharacterized protein LOC111457508 [Cucurbita moschata]	[more]

BLAST of HG10002348 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10002348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J012	2.9e-136	87.20	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1	[more]
A0A6J1GTX9	1.4e-135	86.51	uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A0A0LFR7	1.6e-134	86.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1	[more]
A0A5D3BXV5	2.5e-132	85.71	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE...	[more]
A0A1S3BHB4	2.5e-132	85.71	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]

BLAST of HG10002348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13780.1	3.4e-57	45.90	SMAD/FHA domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 3..110 e-value: 3.3E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..292
None	No IPR available	PANTHER	PTHR37733	SMAD/FHA DOMAIN-CONTAINING PROTEIN	coord: 1..291
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 6..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002348.1	HG10002348.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding