HG10002335 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002335
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNase III domain-containing protein
Location	Chr11: 5695022 .. 5699203 (+)
RNA-Seq Expression	HG10002335
Synteny	HG10002335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTTTATCGGCGACTTCGACGAGCATCGTTGCTTCATGGGACACTCAACAAAGGCTTTCGTACAATCCCAATGCCCCAAGAAACCCCAACAAGAAACCCAATTCTCTATCTCTTTCGCCGACCTCACAAGCCACCGGAAATGCTGCCTTAACCGCAACGAACATTCGAACCAACCAAATTGTTACCGACCTCCTCAACCGTCGCAATCCCAGCTCAATTGAAGGTAAATTCATGATGGGGTTTCTGATTTCTTTAATGGGTTTTCGATTTTTTTGCTGGAAATTTTGAAGTTTCTTCTGTTAGGTTGATGGGAATGTTGGGAATTGTTAGTGGAATCGGGGTTTCCGTTGTGTTTTATGCATTGTGGTGTTGGGAAATGGTAGCTGAACTCGATTTCTGGCCGGTTGTGAAATTGTATGGTGTCATAGAAAAATAGATGCTATGCAACCGAGAAAAATGGAAGATGAAAAGGCTTGTTGGTCTGGGATTTTTTTTTTTTTTTCTCCCTTATGGCAGCGTATGTACATCTCAACTAATCTCACTGGACAATCTGTCTAATCCTACAACATTTGGATATTAAGGAAATCCTAGAATAGTATATACTAGTTGGCCACTCTAGATTGAAGCCACAACTCTTTAGCCATTTGGTTCTTTTTTTTTTTTTGGTTATGTTCCCACTACCACTATGTTGGTCTGGATTATAAAAGTTCAATTTGGTAGAACTTAGCGTGATTTTTCTTTTCATTTTCTAATGAGGGCTTGTTATGTTATGTAACACATTGAAGACGTTTGGAAGCTAATCGATATTGTTTTGGTAAGAGTGGTAGTGGAAGATAAGGCACAATGGAACCGAACTTAGAAGATTTTAGTGAAAAGATTCTCATTGCTATTGTTATTGTTTCAAATTTGAGATATTTTCATTGAATGTGAAATTTGTTACTTTTAGGCTGCAAATTAGTGGAGCCAGATGGTCTCTATTTGGGATATGAGCAGTGGTTGCCAGATCCACCAAAGGTGCAGAAGCCCCGATCTGTGTTCAATGCAGCTTCATTAGCATATATTGGCGATTGCATCTATGAGGTGCATTTATGACTCTTTAACTTCTCGGTTTTGATATTTTCTGGAATGTTATGTTTGTTTCTGATGTCCTGAGTTTGGAAGTGTTATATAGAAATTGATAGCAATTTTCATGCCTAGGAATGATGTAGCATATGATACTGTGAAGTTTGGTTTTCCTCCATGGCTTACGCTGACCGTTTCTGAAATATGCAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCATTGAGTATTGAAGAATTCAATGACCGTGTTATGGCTGTTGTACGATGTGAAGCACAAGTATGTCAAGTCCTGCTCAATTAAATGCTTGAATGGAATAAATCATTCCCTAACAATGTACAATGTCTGTCTTTATAAATATTGTTCTATATCATCTATCCTAATAAACGGTCAGATTCGTGTATGTGGTTGTCCATTGTCATGCAAAATAACACTGAAAGTAGTGGTATTTCACTTTCGCCTTGTGGCTCCCACTTAGTATGTGGTTTTCATGTAAGTTGTAAGGTTAGTTGTCCATGACTTCCTCAACTTCTCATGAGTCTTCACAACCCTCCATCCAAGAAATTTGGAAACTGGCAATGTTCTGTTCTGACTTCTCCTTATTTTTAATCAATGAACCCATGTTTGCATTTTATGCATCTCAACTGTACAACCACATTGTATATCCTCTTATTAATACAAGGTAGAAGACCTCTATACTCAGATCGATTTTGTTATATTTCAGGATGTTCTACTCCAGAAACTTCTAAATGATAATATCTTAACAGAGGCAGAGAGGTCAGTTAAGTCTTTAAGCATTTCATACCTTGTCTTTCATTCTCAATTTCAATGCATAAACTCTGTCAGTAAGAAGTGGATAATTTAACTGCCCTTTTAATCCTCATTCACGTGTATGTTGCACCCATGAACTTTTCTCCCCTGAATCCTGATTTGTTGGATCTGATAAACCTTAATGTAGGGACATCCTTCGATGGGGGAAAAATGTTGGTTCCTCCTCTAAAACACGTACAAAAAAACGTGCTGGTGCTGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAGTCAGTTTCCTTTAATTCCTGCTCATTTGAACTAATATTGCCAATTGCCATTTCATCAAACAAAATGTTTGAAACTTATTGTTTATATTTTTTGTAGATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATCATGCAAAAGCTCGGCTTCTCAACTGATTCGTCCTTGCAATTAATTTCAGAGGAATCAAATAGTAAGTTTATTTATAACAATTGCAATCCTCTTCCATCATATTTTACCGGTTAAGCTTCAAGTAGGTGGATAGGCACCACATCAGCCTGTCAACTTTTGATTACCTCCGGCTGAATTCATCCTAATAAATAAATAATTAAAATATTAAACTAAAGATTGTTTGCTGTTATGTTCATATTCCATTGGCAGCCATAGGCATAAGTTGTTGATGATCATATTATGTATTCTACTTGGAGTTCGGTAAGAAAATACGAGAATCAAACGTGGAAACAGACACTTCACTTCTAGATCACCTTGTGAAAGGATCGAAAACCTCATTTCTGATCTTTGTATGTTTGAGAGGTGGCTAGATATATGGCCACTTTATGGGGATTGGTTACTAGACCATTTGTAACTATGAGCTTAGTCTTGTTCTTTTAAATTGGAGTTTGTTTTTTTTTTAGCATCAGAGCCCTTTTGTTTTTGTTCATTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCATTTTTCTCAATCAACGCGTGGTTTCTTACCAAAAATGATCTCTTGCTATCTGAGATCATTTGGTCCCAACGGTTTTCATTCTCATATCAATCCATTTTGATCCTTTCCAATATGAACTCCCATAATTTTTTCCACTAGGCGACCAATCAAGCAAGTTAGGTGATGAAGACAAGACATGATCATCGTTGAGCTAAACCATGGTACTGCACTAATACTTCAAAACGGATCAATCCATGGATGTATTTACAATTGATCAGCAATTGAATTTTGTGGCTACTGGCTCTGCATGTTCACTGTACATCTTACGCCCTTCTTTATGCAAATAGGCATGTTTAGTTGACATTTTTGGTTTTTAGGTAATCTCTTCCTTGTACTTTGTGGTAGTTCTGTAAATTATTCTATAAAACTCAGTTGTCACTTCCCACTTACCATGTATTCTGATGATGTCTCCCGTTGCTATCTGTAGCAACATTGCATTGTAACAGAGATACCACACCTTATAGGAGATGTTTAGCTTATGATTTGGAATTGAATATAGTCTGTGTTTGGATTGTATAGAAGATTAGGTTAAAGAGACGTCAGCTCGGTTTCTGTGGCTCGTTTTTTGTCTGGGTTTATGATTTGTAAAATTTAGTATGTAGTATAAGGTGCGAGTTTCATAAGACCGGGCTTATGTAACTCGTGCAATTAACGAATTTGTAGCTTGGAATAAGAAACTGACATACTAAACTACATGGAGTCTCCTTTTCTTAACCCTTTTTTTCCCTCAACCCATTCAAACAATACCACTTTAGCTTTGGTTTCAAAAGGCCAAAAAGGAAGAATAGAATAAAAGTTGAAGCCAATTGACCATATTTGGACTGAATCATACCCAAAAAGAAGCCCAAGATGATCCAAACAGACAAGAAATGAAATCAGGAGAAACCATATTTGGACTGAATCATACCCAAAAAGAAGCCCAAGATGATCCAAACAGACAAGAAATGAAATCAGGAGAAACCCACCACTTTAAATTAGGTGAATGCTCTCTGTCTCTAGAATGTGCAGACAAAAAAGACATGTTCAGGAATCTCTGATATATTCAAGAAGTTTCTGAAGTCAACACCACAAATAAGATAACACAGAATGAAGTGATAAAAAGGAAGATGATGATTGAGAACTGATATGGTGATGGCTCTGATCTGATAACTCAAGTAGGCCCACAATGGACAAGAGTTTTGGATATGGCTTACTTCATTCAAAGATTAACACCTCTCTTGAATGTGTGGCAATCTCATCCCAATTTCAAGGATAACTCTTACTCTTAG

mRNA sequence

ATGGTAACTTTATCGGCGACTTCGACGAGCATCGTTGCTTCATGGGACACTCAACAAAGGCTTTCGTACAATCCCAATGCCCCAAGAAACCCCAACAAGAAACCCAATTCTCTATCTCTTTCGCCGACCTCACAAGCCACCGGAAATGCTGCCTTAACCGCAACGAACATTCGAACCAACCAAATTGTTACCGACCTCCTCAACCGTCGCAATCCCAGCTCAATTGAAGGCTGCAAATTAGTGGAGCCAGATGGTCTCTATTTGGGATATGAGCAGTGGTTGCCAGATCCACCAAAGGTGCAGAAGCCCCGATCTGTGTTCAATGCAGCTTCATTAGCATATATTGGCGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCATTGAGTATTGAAGAATTCAATGACCGTGTTATGGCTGTTGTACGATGTGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATATCTTAACAGAGGCAGAGAGGGACATCCTTCGATGGGGGAAAAATGTTGGTTCCTCCTCTAAAACACGTACAAAAAAACGTGCTGGTGCTGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATCATGCAAAAGCTCGGCTTCTCAACTGATTCGTCCTTGCAATTAATTTCAGAGGAATCAAATAGCCCACAATGGACAAGAGTTTTGGATATGGCTTACTTCATTCAAAGATTAACACCTCTCTTGAATGTGTGGCAATCTCATCCCAATTTCAAGGATAACTCTTACTCTTAG

Coding sequence (CDS)

ATGGTAACTTTATCGGCGACTTCGACGAGCATCGTTGCTTCATGGGACACTCAACAAAGGCTTTCGTACAATCCCAATGCCCCAAGAAACCCCAACAAGAAACCCAATTCTCTATCTCTTTCGCCGACCTCACAAGCCACCGGAAATGCTGCCTTAACCGCAACGAACATTCGAACCAACCAAATTGTTACCGACCTCCTCAACCGTCGCAATCCCAGCTCAATTGAAGGCTGCAAATTAGTGGAGCCAGATGGTCTCTATTTGGGATATGAGCAGTGGTTGCCAGATCCACCAAAGGTGCAGAAGCCCCGATCTGTGTTCAATGCAGCTTCATTAGCATATATTGGCGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCATTGAGTATTGAAGAATTCAATGACCGTGTTATGGCTGTTGTACGATGTGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATATCTTAACAGAGGCAGAGAGGGACATCCTTCGATGGGGGAAAAATGTTGGTTCCTCCTCTAAAACACGTACAAAAAAACGTGCTGGTGCTGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATCATGCAAAAGCTCGGCTTCTCAACTGATTCGTCCTTGCAATTAATTTCAGAGGAATCAAATAGCCCACAATGGACAAGAGTTTTGGATATGGCTTACTTCATTCAAAGATTAACACCTCTCTTGAATGTGTGGCAATCTCATCCCAATTTCAAGGATAACTCTTACTCTTAG

Protein sequence

MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQWTRVLDMAYFIQRLTPLLNVWQSHPNFKDNSYS

Homology

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BLAST of HG10002335 vs. NCBI nr
Match: XP_038882062.1 (uncharacterized protein LOC120073279 isoform X2 [Benincasa hispida])

HSP 1 Score: 452.2 bits (1162), Expect = 3.2e-123
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAP+NPNKKPNSLSLSPTSQ TGNA LTATNIRTN
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPKNPNKKPNSLSLSPTSQTTGNATLTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRNPSSIEG KLVEPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNPSSIEGSKLVEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLL DN LTE ERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLIDNFLTEVERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN+
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNN 240

Query: 241 PQ 243
            Q
Sbjct: 241 DQ 242

[Close]

BLAST of HG10002335 vs. NCBI nr
Match: XP_008447605.1 (PREDICTED: uncharacterized protein LOC103490018 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 9.2e-123
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLS SPTSQ+TGNA LTATNIRT+
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSPSPTSQSTGNATLTATNIRTD 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRN SSIEGCKL EPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNRSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LT AERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTGAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240

Query: 241 PQ 243
            Q
Sbjct: 241 DQ 242

[Close]

BLAST of HG10002335 vs. NCBI nr
Match: XP_038881983.1 (uncharacterized protein LOC120073279 isoform X1 [Benincasa hispida])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 229/239 (95.82%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAP+NPNKKPNSLSLSPTSQ TGNA LTATNIRTN
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPKNPNKKPNSLSLSPTSQTTGNATLTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRNPSSIEG KLVEPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNPSSIEGSKLVEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLL DN LTE ERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLIDNFLTEVERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN 239

[Close]

BLAST of HG10002335 vs. NCBI nr
Match: XP_004146824.1 (uncharacterized protein LOC101205919 [Cucumis sativus] >KGN59823.1 hypothetical protein Csa_001373 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.7e-122
Identity = 228/238 (95.80%), Postives = 232/238 (97.48%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKP S S SPTSQATGNA LTATNIRTN
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPKSPSFSPTSQATGNAILTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRNPSSIEGCKL EPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNPSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES 239
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ+ISEES
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQMISEES 238

[Close]

BLAST of HG10002335 vs. NCBI nr
Match: XP_023526365.1 (uncharacterized protein LOC111789879 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.9 bits (1117), Expect = 5.3e-118
Identity = 221/242 (91.32%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M+TLSATSTSIVASWDTQQRL+YNPNAPRNPNKKP SLS+SPTSQ+TGNA LTATNIRTN
Sbjct: 1   MLTLSATSTSIVASWDTQQRLTYNPNAPRNPNKKPKSLSVSPTSQSTGNATLTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKVQKPRSVFNAASLAY+GDCIY
Sbjct: 61  QIVSDLLKRRSPGSNEGSKSVEPDGLYLGYEQWLPNPPKVQKPRSVFNAASLAYMGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFP LSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPTLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMKKLGFSTDSSLQLIPEESNS 240

Query: 241 PQ 243
            Q
Sbjct: 241 DQ 242

[Close]

BLAST of HG10002335 vs. ExPASy Swiss-Prot
Match: P74327 (Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=mrnC PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.4e-19
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 96  DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLL 155
           D P VQ      +  +LAY+GD ++ELY R  +LFPP  I +F+ RV+A VR E Q  +L
Sbjct: 18  DAPAVQS----LSPVALAYLGDAVFELYVRCCYLFPPRRIGDFHRRVVAQVRAEQQAQIL 77

Query: 156 QKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKR 215
             LL    LT+ E++ +R G+N  +S    T +RA   +Y  AS LETL+GYLYL + +R
Sbjct: 78  TTLLPQ--LTDPEKEWVRRGRNAATS----TSRRANPELYQAASGLETLLGYLYLRDARR 132

Query: 216 LDEIM 221
           LDE++
Sbjct: 138 LDELL 132

[Close]

BLAST of HG10002335 vs. ExPASy Swiss-Prot
Match: Q8DLQ0 (Mini-ribonuclease 3 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=mrnC PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.1e-17
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 88  LGYEQWLP-DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVV 147
           L + + LP  PP +  P      A+LAY GD +YEL+ R  FL PP  I  ++ +V+A V
Sbjct: 2   LDFGELLPLQPPTI--PAHQLPPAALAYFGDAVYELFIRLLFLTPPQRINAYHRQVVAHV 61

Query: 148 RCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIG 207
           R E+Q   +  L      TE ER I R G+N  +       KR  A +Y +A+  E L+G
Sbjct: 62  RAESQARYMDFLW--EYCTETERSIFRQGRNAAADG----PKRVAAKIYRQATGFEALLG 121

Query: 208 YLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSP 242
           YLYL N +RL EI Q L     S ++  +  + SP
Sbjct: 122 YLYLTNPQRLQEIFQLLAGHIRSEVENKTHAAESP 148

[Close]

BLAST of HG10002335 vs. ExPASy Swiss-Prot
Match: Q5N0K8 (Mini-ribonuclease 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=mrnC PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 6.9e-12
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 111 SLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERD 170
           +LAY+GD +YE + R   L P     + +  V+  VR E Q  LL  LL   +LT  E +
Sbjct: 27  ALAYLGDALYEFHVRLRLLLPAQRSHQVHQSVVGAVRAERQAELLVSLL--PLLTAEELE 86

Query: 171 ILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKL 224
           I+R G+N       R  +R     Y +A+ LETL+GYLYL + +RL  ++Q+L
Sbjct: 87  IVRRGRNAAG----RVPRRLTGEYYQQATGLETLLGYLYLCDPQRLQALLQQL 133

[Close]

BLAST of HG10002335 vs. ExPASy Swiss-Prot
Match: Q05370 (Mini-ribonuclease 3 OS=Synechococcus sp. (strain PCC 6716) OX=32048 GN=mrnC PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.0e-12
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 110 ASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAER 169
           ++LAY GD +YEL+ R  FL PP  I  ++ +V+A VR E+Q   +  L      T AE 
Sbjct: 25  SALAYFGDAVYELFIRFIFLTPPQRINAYHHQVVAHVRAESQARYMDILWPH--CTAAEL 84

Query: 170 DILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKL 224
            I R G+N  +       KR  A +Y +A+  E L+GYLYL + +RL +++  L
Sbjct: 85  TIFRQGRNAAADG----PKRVPAKIYRQATGFEALLGYLYLTDPQRLQDVLALL 132

[Close]

BLAST of HG10002335 vs. ExPASy Swiss-Prot
Match: Q2RFM4 (Mini-ribonuclease 3 OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=mrnC PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 111 SLAYIGDCIYELYARRHFL-FPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAER 170
           +LAY+GD +YEL  R H +   P   E+ +   +  VR  AQ  ++  L  +  LT AE+
Sbjct: 11  ALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPAL--EEYLTPAEK 70

Query: 171 DILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLN----NVKRLDEIMQKL 224
           DILR G+N       RT   A  A Y+ +++LE+L+GYLYL      V+ L  ++ KL
Sbjct: 71  DILRRGRNARPGHLPRT---AAPAEYHSSTALESLLGYLYLQGDWARVEELAHLIFKL 123

[Close]

BLAST of HG10002335 vs. ExPASy TrEMBL
Match: A0A1S3BIG3 (uncharacterized protein LOC103490018 OS=Cucumis melo OX=3656 GN=LOC103490018 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.5e-123
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLS SPTSQ+TGNA LTATNIRT+
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSPSPTSQSTGNATLTATNIRTD 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRN SSIEGCKL EPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNRSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LT AERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTGAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240

Query: 241 PQ 243
            Q
Sbjct: 241 DQ 242

[Close]

BLAST of HG10002335 vs. ExPASy TrEMBL
Match: A0A0A0LDF2 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G848810 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 228/238 (95.80%), Postives = 232/238 (97.48%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKP S S SPTSQATGNA LTATNIRTN
Sbjct: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPKSPSFSPTSQATGNAILTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLLNRRNPSSIEGCKL EPDGLYLGY+QWLPDPPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLNRRNPSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES 239
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ+ISEES
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQMISEES 238

[Close]

BLAST of HG10002335 vs. ExPASy TrEMBL
Match: A0A6J1J002 (uncharacterized protein LOC111479993 OS=Cucurbita maxima OX=3661 GN=LOC111479993 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.8e-117
Identity = 219/242 (90.50%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M+TLSATSTSIVASWDTQQRL+YNPNAPRNPNKKP SLS+SPTSQ+TG A LTATNIRTN
Sbjct: 1   MLTLSATSTSIVASWDTQQRLTYNPNAPRNPNKKPKSLSVSPTSQSTGKATLTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKVQKPRSVFNAASLAY+GDCIY
Sbjct: 61  QIVSDLLKRRSPVSNEGSKSVEPDGLYLGYEQWLPNPPKVQKPRSVFNAASLAYMGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFP L+IEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPTLNIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMKKLGFSTDSSLQLIPEESNS 240

Query: 241 PQ 243
            Q
Sbjct: 241 EQ 242

[Close]

BLAST of HG10002335 vs. ExPASy TrEMBL
Match: A0A6J1GYR2 (uncharacterized protein LOC111458065 OS=Cucurbita moschata OX=3662 GN=LOC111458065 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.9e-116
Identity = 217/242 (89.67%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M TL+ATSTSIVASWDTQQRL+YNPNA RNPNKKP SLS+SPTSQ+TGNA LTATNIRTN
Sbjct: 1   MPTLTATSTSIVASWDTQQRLTYNPNASRNPNKKPKSLSVSPTSQSTGNATLTATNIRTN 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKVQKPRSVFNAASLAY+GDCIY
Sbjct: 61  QIVSDLLKRRSPGSNEGSKSVEPDGLYLGYEQWLPNPPKVQKPRSVFNAASLAYMGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFP L+IEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGS
Sbjct: 121 ELYARRHFLFPTLNIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGS 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNV+RLDEIM+KLGFSTDSSLQLI EESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVERLDEIMKKLGFSTDSSLQLIPEESNS 240

Query: 241 PQ 243
            Q
Sbjct: 241 DQ 242

[Close]

BLAST of HG10002335 vs. ExPASy TrEMBL
Match: A0A6J1D2Y6 (uncharacterized protein LOC111016851 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016851 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 6.1e-112
Identity = 214/248 (86.29%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M+TLSATSTS+VASWDTQQRLSYNPNAPR P KKP++L+LSPTSQATGN  L A N+R +
Sbjct: 1   MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNVTLAAPNVRPD 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
           QIV+DLL RR+PS IEG K VEP+GLYLG EQWLP+PPKVQKPRSVFNAASLAYIGDCIY
Sbjct: 61  QIVSDLLKRRSPSPIEG-KPVEPEGLYLGCEQWLPNPPKVQKPRSVFNAASLAYIGDCIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPL+IEE+NDRVMAVVRCEAQD+LLQKLLNDN LTEAERDILRWGKNVG 
Sbjct: 121 ELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG- 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240
           SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Sbjct: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS 240

Query: 241 PQWTRVLD 249
            Q  ++ D
Sbjct: 241 NQLGKLGD 246

[Close]

BLAST of HG10002335 vs. TAIR 10
Match: AT3G13740.1 (Ribonuclease III family protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-71
Identity = 148/239 (61.92%), Postives = 180/239 (75.31%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MV LSA+ST + A+ DTQ RL YNPNAPR   K PN  S  P      +  ++ +     
Sbjct: 1   MVILSASST-VRAALDTQPRLPYNPNAPRKVKKIPNGNSFLPPPSPAPSPGISIS----- 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
             V DLL R  PSS E    V+ D  Y+GYE W P PPK++KPRSVFN ASLA+IGD IY
Sbjct: 61  --VADLLKR--PSSKE--ITVDVDDTYMGYETWSPSPPKLEKPRSVFNPASLAFIGDSIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIE++NDRV AVVRCEAQ  LL KL++D+ LT+ ERDILRWGKN+G 
Sbjct: 121 ELYARRHFLFPPLSIEDYNDRVRAVVRCEAQYALLNKLVDDDFLTKEERDILRWGKNLG- 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN 240
           S++TRT++RAG AVYN+ASSLETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N
Sbjct: 181 SARTRTRRRAGNAVYNKASSLETLIGYLYLTNGKRLEKIMEKLGFSSDSSTEIVIEETN 226

[Close]

BLAST of HG10002335 vs. TAIR 10
Match: AT1G55140.1 (Ribonuclease III family protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 150/241 (62.24%), Postives = 181/241 (75.10%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M  LSA+ST + A+ DTQ +L YNPNAPRN  K  N  S  P S  + ++   ATN+  +
Sbjct: 1   MAILSASSTIVRAALDTQPKLRYNPNAPRNVKKNSNLSSFVPPSSPSSSS--PATNLSVS 60

Query: 61  QIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCI 120
             V+DLL R     I +G      D   +GYE+W P PPKV+KPRSVFNAASLAYIGD I
Sbjct: 61  --VSDLLKRPASKDIGDGF-----DDTCVGYEKWFPSPPKVEKPRSVFNAASLAYIGDSI 120

Query: 121 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVG 180
           YE+YARRHFLFPPLSIEE+NDRV AVVRCEAQ  LLQKL++D+ LT+ ERDILRWGKNVG
Sbjct: 121 YEIYARRHFLFPPLSIEEYNDRVRAVVRCEAQYALLQKLVDDDFLTKDERDILRWGKNVG 180

Query: 181 SSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN 240
            S KTR+ +RAG AVYN+ASSLETLIGYLYL+N KRL+E+MQKLGFS+ SS + + +E+ 
Sbjct: 181 -SVKTRSTRRAGVAVYNKASSLETLIGYLYLSNGKRLEEMMQKLGFSSGSSTERMVKEAG 231

[Close]

BLAST of HG10002335 vs. TAIR 10
Match: AT3G13740.2 (Ribonuclease III family protein )

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66
Identity = 142/239 (59.41%), Postives = 174/239 (72.80%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           MV LSA+ST + A+ DTQ RL YNPNAPR   K PN  S  P      +  ++ +     
Sbjct: 1   MVILSASST-VRAALDTQPRLPYNPNAPRKVKKIPNGNSFLPPPSPAPSPGISIS----- 60

Query: 61  QIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCIY 120
             V DLL R  PSS E    V+ D  Y+GYE W P PPK++KPRSVFN ASLA+IGD IY
Sbjct: 61  --VADLLKR--PSSKE--ITVDVDDTYMGYETWSPSPPKLEKPRSVFNPASLAFIGDSIY 120

Query: 121 ELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGS 180
           ELYARRHFLFPPLSIE++NDRV AV        LL KL++D+ LT+ ERDILRWGKN+G 
Sbjct: 121 ELYARRHFLFPPLSIEDYNDRVRAVY------ALLNKLVDDDFLTKEERDILRWGKNLG- 180

Query: 181 SSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN 240
           S++TRT++RAG AVYN+ASSLETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N
Sbjct: 181 SARTRTRRRAGNAVYNKASSLETLIGYLYLTNGKRLEKIMEKLGFSSDSSTEIVIEETN 220

[Close]

BLAST of HG10002335 vs. TAIR 10
Match: AT1G55140.2 (Ribonuclease III family protein )

HSP 1 Score: 178.3 bits (451), Expect = 8.3e-45
Identity = 102/177 (57.63%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 1   MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTN 60
           M  LSA+ST + A+ DTQ +L YNPNAPRN  K  N  S  P S  + ++   ATN+  +
Sbjct: 1   MAILSASSTIVRAALDTQPKLRYNPNAPRNVKKNSNLSSFVPPSSPSSSS--PATNLSVS 60

Query: 61  QIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAASLAYIGDCI 120
             V+DLL R     I +G      D   +GYE+W P PPKV+KPRSVFNAASLAYIGD I
Sbjct: 61  --VSDLLKRPASKDIGDGF-----DDTCVGYEKWFPSPPKVEKPRSVFNAASLAYIGDSI 120

Query: 121 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGK 177
           YE+YARRHFLFPPLSIEE+NDRV AVVRCEAQ  LLQKL++D+ LT+ ER I   G+
Sbjct: 121 YEIYARRHFLFPPLSIEEYNDRVRAVVRCEAQYALLQKLVDDDFLTKDERSIYFGGE 168

The following BLAST results are available for this feature:

BLAST of HG10002335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882062.1	3.2e-123	95.04	uncharacterized protein LOC120073279 isoform X2 [Benincasa hispida]	[more]
XP_008447605.1	9.2e-123	95.04	PREDICTED: uncharacterized protein LOC103490018 [Cucumis melo]	[more]
XP_038881983.1	1.2e-122	95.82	uncharacterized protein LOC120073279 isoform X1 [Benincasa hispida]	[more]
XP_004146824.1	2.7e-122	95.80	uncharacterized protein LOC101205919 [Cucumis sativus] >KGN59823.1 hypothetical ...	[more]
XP_023526365.1	5.3e-118	91.32	uncharacterized protein LOC111789879 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10002335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P74327	4.4e-19	44.00	Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 G...	[more]
Q8DLQ0	7.1e-17	37.42	Mini-ribonuclease 3 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=...	[more]
Q5N0K8	6.9e-12	38.05	Mini-ribonuclease 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]
Q05370	9.0e-12	37.72	Mini-ribonuclease 3 OS=Synechococcus sp. (strain PCC 6716) OX=32048 GN=mrnC PE=3...	[more]
Q2RFM4	3.2e-09	37.29	Mini-ribonuclease 3 OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=...	[more]

BLAST of HG10002335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIG3	4.5e-123	95.04	uncharacterized protein LOC103490018 OS=Cucumis melo OX=3656 GN=LOC103490018 PE=...	[more]
A0A0A0LDF2	1.3e-122	95.80	RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G848810 P...	[more]
A0A6J1J002	4.8e-117	90.50	uncharacterized protein LOC111479993 OS=Cucurbita maxima OX=3661 GN=LOC111479993...	[more]
A0A6J1GYR2	6.9e-116	89.67	uncharacterized protein LOC111458065 OS=Cucurbita moschata OX=3662 GN=LOC1114580...	[more]
A0A6J1D2Y6	6.1e-112	86.29	uncharacterized protein LOC111016851 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10002335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13740.1	1.0e-71	61.92	Ribonuclease III family protein	[more]
AT1G55140.1	1.4e-71	62.24	Ribonuclease III family protein	[more]
AT3G13740.2	2.9e-66	59.41	Ribonuclease III family protein	[more]
AT1G55140.2	8.3e-45	57.63	Ribonuclease III family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 99..229 e-value: 7.0E-42 score: 144.0
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 105..223
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 111..211 e-value: 8.6E-11 score: 42.4
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 98..223 e-value: 8.95653E-11 score: 56.4671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..45
None	No IPR available	PANTHER	PTHR34276:SF2	BNAC05G39580D PROTEIN	coord: 1..239
None	No IPR available	PANTHER	PTHR34276	MINI-RIBONUCLEASE 3	coord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002335.1	HG10002335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
molecular_function	GO:0004525	ribonuclease III activity