HG10002273 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002273
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionWD repeat-containing protein 91-like protein
LocationChr11: 5065526 .. 5066095 (+)
RNA-Seq ExpressionHG10002273
SyntenyHG10002273
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA

mRNA sequence

ATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA

Coding sequence (CDS)

ATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA

Protein sequence

MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYFSGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACKSMLCSYSVI
Homology
BLAST of HG10002273 vs. NCBI nr
Match: KAE8650729.1 (hypothetical protein Csa_023412 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 3.0e-56
Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYF 60
           MELEELE+R EELKAMSE QEA ANYYD KLH+II AYFIWER F F IS KTNS  NYF
Sbjct: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNS-PNYF 64

Query: 61  S-----GNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQ 120
           S      NW +ILALS +Y+LVY+LLYLDA LMLYR+E + +LIL KHAQLY QI +IKQ
Sbjct: 65  SSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQ 124

Query: 121 EADSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLE 180
           E +SIDSSSMEA          EED++L +NSSSTFRRS ER FYMSTIFCALV VASLE
Sbjct: 125 EFNSIDSSSMEA----------EEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLE 183

Query: 181 LYACKSMLCS 186
           LYACKS+LCS
Sbjct: 185 LYACKSILCS 183

BLAST of HG10002273 vs. NCBI nr
Match: KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-48
Identity = 113/189 (59.79%), Postives = 143/189 (75.66%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKT---NSHS 60
           ME+EEL++  EE++ M E  EA+ NYYD KLH+IIVAYF+WER+FFFGISKKT      +
Sbjct: 1   MEVEELKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKTFPSTIST 60

Query: 61  NYFSGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEA 120
              +GNWWVILALSC  + VY+LL+ DA LMLYR E QL LIL+KHAQL + +  IK+E 
Sbjct: 61  LSCNGNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEEQ 120

Query: 121 DSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTF--RRSGERKFYMSTIFCALVGVASLE 180
               +S MEAGD++SHGL  EE++ML +NS+S F  RR  ERK ++ TIFCA +GVASLE
Sbjct: 121 ADTKASLMEAGDQASHGLSLEEELML-INSTSPFRRRRPWERKVHVYTIFCAFIGVASLE 180

Query: 181 LYACKSMLC 185
           LYACK++LC
Sbjct: 181 LYACKAVLC 188

BLAST of HG10002273 vs. NCBI nr
Match: KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 113/186 (60.75%), Postives = 140/186 (75.27%), Query Frame = 0

Query: 4   EELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKT---NSHSNYF 63
           EEL++  EE++ M E  EA+ NYYD KLH+IIVAYF+WER+FFFGISKKT      +   
Sbjct: 8   EELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSC 67

Query: 64  SGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSI 123
           +GNWWVILALS   + VY+LL+ D  LMLYR E QL LIL+KHAQL + +  IK+E   I
Sbjct: 68  NGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADI 127

Query: 124 DSSSMEAGDESSHGLRQEEDVMLKLNSSSTF--RRSGERKFYMSTIFCALVGVASLELYA 183
            +S MEAGDE+SHGL  EE++ML +NS+S F  RR  ERK Y+ TIFCAL+GVASLELYA
Sbjct: 128 KASLMEAGDEASHGLSLEEELML-INSTSPFRRRRPWERKVYVYTIFCALIGVASLELYA 187

Query: 184 CKSMLC 185
           CK++LC
Sbjct: 188 CKAVLC 192

BLAST of HG10002273 vs. NCBI nr
Match: KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-42
Identity = 109/195 (55.90%), Postives = 138/195 (70.77%), Query Frame = 0

Query: 1   MELEE-LERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERI-----FFFGISKKTN 60
           ME+EE +E+R EE+K M E  E R NYYD KLH+IIVAY +WER+     FFFG+S  TN
Sbjct: 1   MEIEEQMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVS-NTN 60

Query: 61  SHSNY----FSGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQI 120
             SN      +G WWVI+ALSC+ + VYMLL++DA LMLY  + QL+LIL+ H QLY+Q+
Sbjct: 61  FASNISTLSCNGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQL 120

Query: 121 WRIKQEADSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVG 180
             IK        S MEAGDE+SHGL  EE++ML  ++++  RR   RKFY+ TIFCAL+ 
Sbjct: 121 LAIK-------DSLMEAGDEASHGLSLEEELMLINSNAAYRRRPWGRKFYVYTIFCALID 180

Query: 181 VASLELYACKSMLCS 186
           VASLELYAC S+LCS
Sbjct: 181 VASLELYACNSVLCS 187

BLAST of HG10002273 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-22
Identity = 80/185 (43.24%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYF 60
           M L ELER+ EELK ++E QE+R  YY+ K+ +I+  Y I+ R+FFFGIS+   + S++ 
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ---TSSSFN 60

Query: 61  SGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSI 120
             +WWVILALS + + +Y LL+LDA  ML+RT+ QLD+I K+  +L+QQI   K + D  
Sbjct: 61  CKDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDV- 120

Query: 121 DSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACK 180
              SME G+ S        + ML L+    FR  G RK Y+     AL+ V ++ELY  K
Sbjct: 121 -GLSMETGESSGGFEFGFHEKMLMLDH---FRIVG-RKVYIYFTVSALLAVTAIELYVSK 176

Query: 181 SMLCS 186
            +LC+
Sbjct: 181 YVLCN 176

BLAST of HG10002273 vs. ExPASy TrEMBL
Match: A0A0A0L822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.5e-56
Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYF 60
           MELEELE+R EELKAMSE QEA ANYYD KLH+II AYFIWER F F IS KTNS  NYF
Sbjct: 1   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNS-PNYF 60

Query: 61  S-----GNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQ 120
           S      NW +ILALS +Y+LVY+LLYLDA LMLYR+E + +LIL KHAQLY QI +IKQ
Sbjct: 61  SSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQ 120

Query: 121 EADSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLE 180
           E +SIDSSSMEA          EED++L +NSSSTFRRS ER FYMSTIFCALV VASLE
Sbjct: 121 EFNSIDSSSMEA----------EEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLE 179

Query: 181 LYACKSMLCS 186
           LYACKS+LCS
Sbjct: 181 LYACKSILCS 179

BLAST of HG10002273 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 80/185 (43.24%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYF 60
           M L ELER+ EELK ++E QE+R  YY+ K+ +I+  Y I+ R+FFFGIS+   + S++ 
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ---TSSSFN 60

Query: 61  SGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSI 120
             +WWVILALS + + +Y LL+LDA  ML+RT+ QLD+I K+  +L+QQI   K + D  
Sbjct: 61  CKDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDV- 120

Query: 121 DSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACK 180
              SME G+ S        + ML L+    FR  G RK Y+     AL+ V ++ELY  K
Sbjct: 121 -GLSMETGESSGGFEFGFHEKMLMLDH---FRIVG-RKVYIYFTVSALLAVTAIELYVSK 176

Query: 181 SMLCS 186
            +LC+
Sbjct: 181 YVLCN 176

BLAST of HG10002273 vs. ExPASy TrEMBL
Match: A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 66/185 (35.68%), Postives = 112/185 (60.54%), Query Frame = 0

Query: 3   LEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYFSG 62
           +EE+++  EEL AM++ Q+ R   Y+  L +I +A+ +W R+FFF +S+ + + S     
Sbjct: 6   IEEMQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQTSPNSSLLHCK 65

Query: 63  NWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIW--RIKQEADSI 122
           +WW++ AL+C    +Y+LL++   LML RTE+QL +I ++  QL+QQIW  R+++    I
Sbjct: 66  HWWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQELPQMI 125

Query: 123 DSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACK 182
           +   M+      H +  E      +  +STF    ERK Y++ I C  +G+ +LELYA +
Sbjct: 126 EPIIMD------HIINGE------MGRTSTF----ERKLYINCILCGFIGIVALELYASR 174

Query: 183 SMLCS 186
           S+LC+
Sbjct: 186 SLLCN 174

BLAST of HG10002273 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 76/184 (41.30%), Postives = 110/184 (59.78%), Query Frame = 0

Query: 1   MELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYF 60
           ME  EL+R  E LK + E QE+R  Y++++  +I +AY IW R+FFF IS+ ++S     
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60

Query: 61  SGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSI 120
             +WW++L LS     VY L +L+A  MLYR + Q+D+I K+ A++ QQI   + + D +
Sbjct: 61  --DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDV 120

Query: 121 DSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACK 180
           D  +MEAGD SS G +    V  KL     F R  ERKFY+     AL+ V ++ELYAC 
Sbjct: 121 D-LAMEAGD-SSDGFQFSFHV--KLLEYGAF-RIVERKFYICATVSALLAVTAIELYACS 177

Query: 181 SMLC 185
            + C
Sbjct: 181 WLYC 177

BLAST of HG10002273 vs. ExPASy TrEMBL
Match: A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.7e-18
Identity = 68/184 (36.96%), Postives = 105/184 (57.07%), Query Frame = 0

Query: 2   ELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYFS 61
           +L +L R    LK +++ QE    Y + KL ++++ Y  W R+FFFG+S       ++  
Sbjct: 46  QLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS------FSFKC 105

Query: 62  GNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSID 121
            +WWVILAL+  Y   Y LL++DA +ML RT  QLD+I K+ A++ QQI  + Q  D++ 
Sbjct: 106 KDWWVILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQI-LVAQNQDNV- 165

Query: 122 SSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACKS 181
             SMEAG++S        + M  L+          RK Y+  I C L+ + ++ELYACK 
Sbjct: 166 GLSMEAGEDSDGFELSFHERMFMLDQFRVVETG--RKVYIYFIVCPLLAITAIELYACKC 219

Query: 182 MLCS 186
           +LC+
Sbjct: 226 LLCN 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8650729.13.0e-5671.05hypothetical protein Csa_023412 [Cucumis sativus][more]
KAG6579352.11.8e-4859.79hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579345.11.1e-4760.75hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579344.15.5e-4255.90hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022157182.14.8e-2243.24uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8221.5e-5671.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1[more]
A0A6J1DSQ02.3e-2243.24uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KUT02.0e-2135.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1[more]
A0A6J1DS872.0e-2141.30uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7TMJ12.7e-1836.96WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 2..185
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 2..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002273.1HG10002273.1mRNA