HG10002268 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002268
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosomal protein L37
LocationChr11: 5039613 .. 5040243 (+)
RNA-Seq ExpressionHG10002268
SyntenyHG10002268
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTAAGTTCGCCTAATCAGTTTGTAGTTTGTGTTTCTTGTTTCATCATTTTACAATTAAATCTGTTTTATTTACTTTGATTAATTTGATTCTTCGATTAGAAGTGGTAATTTTAGATCCCCCATTATCGGTCCAGATAGCAGTAGATTCGTTCTGTGTGTCCTAATCTGTTTGAATGAGTTTGTTTTGCTTTGAGTCTTCGATTTTGGTTTATTTGTTCGTTTGTCTTATGGGGGGTTTTGGATTTAGATAACTGGAGCGTCAAGGCGATCCGCAGGAAGACCACTGGAACTGGGCGGATGAGATATTTGCGCCATGTTCCTCGCAGATTTAAGAGTGGTTTCAGAGAAGGTAGAAGTCTAAATTGTGTAATTCTTGCAGTTTTTACTTATCAACGTGATTCTTTTGGGGCATTTTGTGATTTTAATTACGTTCGGGTTCTGTGATTAGGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAA

mRNA sequence

GGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATATAACTGGAGCGTCAAGGCGATCCGCAGGAAGACCACTGGAACTGGGCGGATGAGATATTTGCGCCATGTTCCTCGCAGATTTAAGAGTGGTTTCAGAGAAGGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAA

Coding sequence (CDS)

GGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATATAACTGGAGCGTCAAGGCGATCCGCAGGAAGACCACTGGAACTGGGCGGATGAGATATTTGCGCCATGTTCCTCGCAGATTTAAGAGTGGTTTCAGAGAAGGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAA

Protein sequence

GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Homology
[Close]
BLAST of HG10002268 vs. NCBI nr
Match: XP_022964011.1 (60S ribosomal protein L37-3-like [Cucurbita moschata] >XP_023513643.1 60S ribosomal protein L37-3-like [Cucurbita pepo subsp. pepo] >KAG6593459.1 60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.7 bits (478), Expect = 2.2e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. NCBI nr
Match: XP_004141772.1 (60S ribosomal protein L37-3 [Cucumis sativus] >XP_008462159.1 PREDICTED: 60S ribosomal protein L37-3-like [Cucumis melo] >XP_038896143.1 60S ribosomal protein L37-3-like [Benincasa hispida] >KAA0059300.1 60S ribosomal protein L37-3 [Cucumis melo var. makuwa] >KGN45374.1 hypothetical protein Csa_016423 [Cucumis sativus] >TYK04028.1 60S ribosomal protein L37-3 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. NCBI nr
Match: XP_022953178.1 (60S ribosomal protein L37-3-like [Cucurbita moschata] >XP_022992450.1 60S ribosomal protein L37-3-like [Cucurbita maxima] >XP_023548197.1 60S ribosomal protein L37-3-like [Cucurbita pepo subsp. pepo] >KAG6575534.1 60S ribosomal protein L37-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014078.1 60S ribosomal protein L37-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.6 bits (475), Expect = 5.0e-44
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Sbjct: 62 GRMRYMRHVPRRFKSGFREGTEAAPRNKGSAASA 95

[Close]
BLAST of HG10002268 vs. NCBI nr
Match: XP_038902074.1 (60S ribosomal protein L37-3 [Benincasa hispida])

HSP 1 Score: 187.6 bits (475), Expect = 5.0e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLRHVPRRFKSGFREGTEAAPR+KGAAASA
Sbjct: 62 GRMRYLRHVPRRFKSGFREGTEAAPRSKGAAASA 95

[Close]
BLAST of HG10002268 vs. NCBI nr
Match: XP_023000413.1 (60S ribosomal protein L37-3-like [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 6.5e-44
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKS+CSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSQCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match: Q43292 (60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-42
Identity = 84/93 (90.32%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 2  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTG 61
          KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGTG
Sbjct: 3  KGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTG 62

Query: 62 RMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          RMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Sbjct: 63 RMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match: Q8LEM8 (60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.9e-42
Identity = 83/94 (88.30%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Sbjct: 62 GRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match: Q8LFH7 (60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.4e-41
Identity = 82/94 (87.23%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Sbjct: 62 GRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

[Close]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match: Q90YT1 (60S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3)

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-29
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 2  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTG 61
          KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKRKYNWS KA RR TTGTG
Sbjct: 3  KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTGTG 62

Query: 62 RMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          RMR+++ V RRF++GFREGT   PR    AAS+
Sbjct: 63 RMRHMKVVFRRFRNGFREGTVPKPRRAAVAASS 95

[Close]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match: P79244 (60S ribosomal protein L37 OS=Bos taurus OX=9913 GN=RPL37 PE=3 SV=4)

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-29
Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 0 

Query: 2  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTG 61
          KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKRKYNWS KA RR TTGTG
Sbjct: 3  KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62

Query: 62 RMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          RMR+L+ V RRF+ GFREGT   P+    AAS+
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAASS 95

[Close]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match: A0A6J1HHN6 (Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111464162 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match: A0A5D3BYC5 (Ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002270 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match: A0A0A0K941 (Ribosomal protein L37 OS=Cucumis sativus OX=3659 GN=Csa_7G446890 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match: A0A1S3CGU0 (Ribosomal protein L37 OS=Cucumis melo OX=3656 GN=LOC103500584 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Sbjct: 62 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match: A0A6J1JVQ3 (Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111488750 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Sbjct: 62 GRMRYMRHVPRRFKSGFREGTEAAPRNKGSAASA 95

[Close]
BLAST of HG10002268 vs. TAIR 10
Match: AT1G52300.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 173.3 bits (438), Expect = 9.1e-44
Identity = 84/93 (90.32%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 2  KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTG 61
          KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGTG
Sbjct: 3  KGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTG 62

Query: 62 RMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          RMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Sbjct: 63 RMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of HG10002268 vs. TAIR 10
Match: AT3G16080.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 171.4 bits (433), Expect = 3.4e-43
Identity = 83/94 (88.30%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Sbjct: 62 GRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]
BLAST of HG10002268 vs. TAIR 10
Match: AT1G15250.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 169.1 bits (427), Expect = 1.7e-42
Identity = 82/94 (87.23%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGT 60
          GKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKR YNWSVKAIRRKTTGT
Sbjct: 2  GKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGT 61

Query: 61 GRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95
          GRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Sbjct: 62 GRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

The following BLAST results are available for this feature:
BLAST of HG10002268 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964011.12.2e-4498.9460S ribosomal protein L37-3-like [Cucurbita moschata] >XP_023513643.1 60S riboso... [more]
XP_004141772.12.9e-4498.9460S ribosomal protein L37-3 [Cucumis sativus] >XP_008462159.1 PREDICTED: 60S rib... [more]
XP_022953178.15.0e-4497.8760S ribosomal protein L37-3-like [Cucurbita moschata] >XP_022992450.1 60S riboso... [more]
XP_038902074.15.0e-4498.9460S ribosomal protein L37-3 [Benincasa hispida][more]
XP_023000413.16.5e-4497.8760S ribosomal protein L37-3-like [Cucurbita maxima][more]
BLAST of HG10002268 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q432921.3e-4290.3260S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2[more]
Q8LEM84.9e-4288.3060S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1[more]
Q8LFH72.4e-4187.2360S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1[more]
Q90YT12.1e-2967.7460S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3[more]
P792442.8e-2967.7460S ribosomal protein L37 OS=Bos taurus OX=9913 GN=RPL37 PE=3 SV=4[more]
BLAST of HG10002268 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HHN61.1e-4498.94Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111464162 PE=3 SV=1[more]
A0A5D3BYC51.4e-4498.94Ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold34... [more]
A0A0A0K9411.4e-4498.94Ribosomal protein L37 OS=Cucumis sativus OX=3659 GN=Csa_7G446890 PE=3 SV=1[more]
A0A1S3CGU01.4e-4498.94Ribosomal protein L37 OS=Cucumis melo OX=3656 GN=LOC103500584 PE=3 SV=1[more]
A0A6J1JVQ32.4e-4497.87Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111488750 PE=3 SV=1[more]
BLAST of HG10002268 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52300.19.1e-4490.32Zinc-binding ribosomal protein family protein [more]
AT3G16080.13.4e-4388.30Zinc-binding ribosomal protein family protein [more]
AT1G15250.11.7e-4287.23Zinc-binding ribosomal protein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 2..52
e-value: 9.9E-26
score: 89.7
IPR001569Ribosomal protein L37eHAMAPMF_00547Ribosomal_L37ecoord: 1..52
score: 16.159836
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..86
e-value: 9.4E-46
score: 156.0
NoneNo IPR availablePANTHERPTHR10768:SF28RIBOSOMAL PROTEIN L37coord: 1..94
NoneNo IPR availablePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 1..94
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 3..22
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 2..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002268.1HG10002268.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome