HG10002254 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002254
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin-responsive protein
Location	Chr11: 4921812 .. 4923023 (-)
RNA-Seq Expression	HG10002254
Synteny	HG10002254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCAGATGGCAGCTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGGCTAGGGCTTCCGGGCGGTGGTGGCGGTCTAATTTCTGCGAGTAAGAACAATGAGAAGAAAAGGGTTTTTTCTGAGGTGGAAGTAGAAGATAAAAGTCACGGCGGCGACGGGCGGAGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCATACCGGCGGAGGAACAGCTTTAAGGGGAAGGAAGAATGTGAAATAAGTGAAGGAATAATAATGGGGATGAAGATAAAAAAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTCTAAGGAAAGTTGATTTGGGAATGGTTAAGGGATATGGAGATCTTGTTGGGGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGATGCTCTGAATATTCTGTCACTTATGAAGATAGAGATGGTGATTGGATGTTGGTTGGAGATGTGCCTTGGAAGTAAGTTTCTTTTTCAAAACCCTAATAACTTTCTTTCCATTTCAATGGTTTCATGCGTCCCGTTTGATATTCATTTCACTTTTACTTTCTAATTTTTTAAAATTGTGCTTATTTTCTTACAACTTTTTTACCATGATTGATGAACAATTAAATTCTTAGCTGAATTCTAAAAACAAACAAGTTTTTAAAAGGGTTGATTTCAAAAATGGAAAAAATATCAAATTATTTATAAATATAAAAAAATTTCACTATCTATTAGCGATAAACCGTGATAGACTACAATAGACCGCAATAGACTTCTATCGCTGACATCTATCGCTCAGTGATAGAAGTCTATCGTGGTCTATTGCGGATAGATGGTGAAATTTTTTTATATTTGTAAATAGTTTGATATTTTTTTATTTATAATAATTTCCTTTTTTAAAAACTATATATTTTTTTAGTTTTTAAAATTTGATTTGGTTTTTTAAAATACTTATAAACCGAAGATAACCCAAAATAAAGAGATCAATAAATGGAAGTGATGTTTATAGGCTTAGTTTTCTTAAAACAAAATTGATTATTAGACAATGTTCTTGTAGATTTATATTTGAAATTTTACATATATGATTTTTGGATTTTAATTAATGTGAATCAATTTTCATCATTGATTTGCAGGATGTTCATTGAATCATGCAAGAGATTGAGGATAGTGAAAAAAACAGAAGCCAAGAGATCAGAGACGAACTCAAATAATTGA

mRNA sequence

ATGACCCAGATGGCAGCTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGGCTAGGGCTTCCGGGCGGTGGTGGCGGTCTAATTTCTGCGAGTAAGAACAATGAGAAGAAAAGGGTTTTTTCTGAGGTGGAAGTAGAAGATAAAAGTCACGGCGGCGACGGGCGGAGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCATACCGGCGGAGGAACAGCTTTAAGGGGAAGGAAGAATGTGAAATAAGTGAAGGAATAATAATGGGGATGAAGATAAAAAAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTCTAAGGAAAGTTGATTTGGGAATGGTTAAGGGATATGGAGATCTTGTTGGGGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGATGCTCTGAATATTCTGTCACTTATGAAGATAGAGATGGTGATTGGATGTTGGTTGGAGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAGTGAAAAAAACAGAAGCCAAGAGATCAGAGACGAACTCAAATAATTGA

Coding sequence (CDS)

ATGACCCAGATGGCAGCTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGGCTAGGGCTTCCGGGCGGTGGTGGCGGTCTAATTTCTGCGAGTAAGAACAATGAGAAGAAAAGGGTTTTTTCTGAGGTGGAAGTAGAAGATAAAAGTCACGGCGGCGACGGGCGGAGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCATACCGGCGGAGGAACAGCTTTAAGGGGAAGGAAGAATGTGAAATAAGTGAAGGAATAATAATGGGGATGAAGATAAAAAAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTCTAAGGAAAGTTGATTTGGGAATGGTTAAGGGATATGGAGATCTTGTTGGGGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGATGCTCTGAATATTCTGTCACTTATGAAGATAGAGATGGTGATTGGATGTTGGTTGGAGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAGTGAAAAAAACAGAAGCCAAGAGATCAGAGACGAACTCAAATAATTGA

Protein sequence

MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAKRSETNSNN

Homology

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BLAST of HG10002254 vs. NCBI nr
Match: XP_038903795.1 (auxin-induced protein AUX22-like [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81
Identity = 161/182 (88.46%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRKQVV 63
           M A GLGLEITELRLGLP GGGGLISASKNNEKKRVFSEVEVEDKSHG    +GRRKQVV
Sbjct: 1   MEAVGLGLEITELRLGLP-GGGGLISASKNNEKKRVFSEVEVEDKSHGDSEDEGRRKQVV 60

Query: 64  GWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGD 123
           GWPPVCSYR+RNSFKGK EC+ SEGIIMGMK K+MYVKVSFEGTPFLRKVDLGMVKGYGD
Sbjct: 61  GWPPVCSYRQRNSFKGKGECDKSEGIIMGMK-KQMYVKVSFEGTPFLRKVDLGMVKGYGD 120

Query: 124 LVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAKRSET 183
           LV AMEKLFGS IG SEY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE KRSE 
Sbjct: 121 LVRAMEKLFGSSIGGSEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEVKRSEM 180

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BLAST of HG10002254 vs. NCBI nr
Match: XP_008447487.1 (PREDICTED: auxin-induced protein AUX22-like [Cucumis melo] >KAA0050762.1 auxin-induced protein AUX22-like [Cucumis melo var. makuwa] >TYK20441.1 auxin-induced protein AUX22-like [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 159/186 (85.48%), Postives = 167/186 (89.78%), Query Frame = 0


Query: 1   MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRK 60
           MTQMAA+GL LEITELRLGLPG  G LIS SKNNEKKRVFSEVEVEDKS      +GRRK
Sbjct: 1   MTQMAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKEECEISEGII-MGMKIKKMYVKVSFEGTPFLRKVDLGMVK 120
           QVVGWPPVCSYR+R+SFKGK ECE SEGI+ MGMK K+MYVKVSFEGTPFLRKVDLGMVK
Sbjct: 61  QVVGWPPVCSYRQRSSFKGKGECE-SEGIMNMGMK-KQMYVKVSFEGTPFLRKVDLGMVK 120

Query: 121 GYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAK 180
           GYGDLVGAMEKLFGSPIGC EY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE K
Sbjct: 121 GYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGK 180

Query: 181 RSETNS 183
            SE NS
Sbjct: 181 GSEMNS 184

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BLAST of HG10002254 vs. NCBI nr
Match: NP_001275532.1 (auxin-induced protein AUX22-like [Cucumis sativus] >KGN58114.1 hypothetical protein Csa_017439 [Cucumis sativus] >BAA85820.1 Aux/IAA protein [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 156/186 (83.87%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRK 60
           MTQ+AA+GL LEITELRLGLPG    LIS SKNNEKKRVFSEVEVEDKS      +GRRK
Sbjct: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGK-EECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVK 120
           QVVGWPPVCSYRRRNSFKGK E+CE  E + MGMK K+MYVKVSFEGTPFLRKVDLGMVK
Sbjct: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMK-KQMYVKVSFEGTPFLRKVDLGMVK 120

Query: 121 GYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAK 180
           GYGDLVGAMEKLFGSPIGC EY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE K
Sbjct: 121 GYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGK 180

Query: 181 RSETNS 183
            SE NS
Sbjct: 181 GSEMNS 185

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BLAST of HG10002254 vs. NCBI nr
Match: XP_023525675.1 (auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 6.5e-64
Identity = 132/172 (76.74%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGWP 63
           MA EGLGLEITELRL       G I ASKNNEKKRVFSEVEVEDKS GG   RKQVVGWP
Sbjct: 1   MATEGLGLEITELRL-------GPIPASKNNEKKRVFSEVEVEDKSDGGG--RKQVVGWP 60

Query: 64  PVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVG 123
           PVCSYRRRNSF+ KEEC   EGI+ G   KKMYVKV  EG  F+RKVDLGMVKGYG+LV 
Sbjct: 61  PVCSYRRRNSFREKEEC---EGIMGGR--KKMYVKVRVEGEAFVRKVDLGMVKGYGELVD 120

Query: 124 AMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEA 176
           AMEKLFG+PIGCS+ ++TYEDRDGDWMLVGDVPWKMFIESCKRLRI+KK+ +
Sbjct: 121 AMEKLFGTPIGCSQCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]

BLAST of HG10002254 vs. NCBI nr
Match: KAG7036487.1 (Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 4.2e-63
Identity = 132/173 (76.30%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 3   QMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGW 62
           QMA EGLGLEITELRL       G I ASKNNEKKRVFSEVEVEDKS GG   RKQVVGW
Sbjct: 176 QMATEGLGLEITELRL-------GPIPASKNNEKKRVFSEVEVEDKSDGGG--RKQVVGW 235

Query: 63  PPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLV 122
           PPVCSYRRRNS + KEE   SEGI+ G   KKMYVKV  EG  F+RKVDLGMVKGYG+LV
Sbjct: 236 PPVCSYRRRNSLREKEE---SEGIMGGR--KKMYVKVRVEGEAFVRKVDLGMVKGYGELV 295

Query: 123 GAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEA 176
            AMEKLFG+PIGCS  ++TYEDRDGDWMLVGDVPWKMFIESCKRLRI+KK+ +
Sbjct: 296 DAMEKLFGTPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 334

[Close]

BLAST of HG10002254 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-46
Identity = 104/190 (54.74%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVE----VEDKSHGGDGR---- 63
           MA EGLGLEITELRLGLP     +   +K NEKKR FSE++     E+ S GG  R    
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 64  -RKQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGM 123
            + QVVGWPPVCSYR++NS        ++EG        KMYVKVS +G PFLRK+DLG+
Sbjct: 61  NKSQVVGWPPVCSYRKKNS--------MNEG------ASKMYVKVSMDGAPFLRKIDLGL 120

Query: 124 VKGYGDLVGAMEKLFG--------SPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKR 177
            KGY DL  A++KLFG             SE+   YED+DGDWMLVGDVPW+MF+ESCKR
Sbjct: 121 HKGYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKR 176

[Close]

BLAST of HG10002254 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 106/191 (55.50%), Postives = 125/191 (65.45%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEK--KRVFSEVE---VEDKSHGGDGRRK- 63
           MA EGLGLEITELRLGLP      + A+KN EK  KRVFSE++    E+ S GG G RK 
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHVAV-ANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKM 60

Query: 64  ----QVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLG 123
               QVVGWPPVCSYR++NS                 +  KMYVKVS +G PFLRK+DLG
Sbjct: 61  ENKNQVVGWPPVCSYRKKNSVN---------------EASKMYVKVSMDGAPFLRKMDLG 120

Query: 124 MVKGYGDLVGAMEKLFG--------SPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCK 177
           M KGY DL  A+EKLFG          +   E+   YED+DGDWMLVGDVPW+MF+ESCK
Sbjct: 121 MHKGYSDLAFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCK 175

[Close]

BLAST of HG10002254 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 98/185 (52.97%), Postives = 121/185 (65.41%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGG-GLISASKNNEKKRVFSEVEVEDKSHGGDGRRK---QV 63
           M  E LGLEITELRLGLPG GG       KN  KKRVFS++E E+ S   DG+++   QV
Sbjct: 1   MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQV 60

Query: 64  VGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYG 123
           VGWPPVCSYR++N+                +   K+YVKVS +G PFLRK+DL M KGY 
Sbjct: 61  VGWPPVCSYRKKNT----------------VNEPKLYVKVSMDGAPFLRKIDLAMHKGYS 120

Query: 124 DLVGAMEKLFGSPIGC--------SEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVK 177
           DL  A++K FG    C        +E+   YED+DGDWMLVGDVPW+MF ESCKRLRI+K
Sbjct: 121 DLAFALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMK 169

[Close]

BLAST of HG10002254 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.6e-42
Identity = 97/187 (51.87%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRK------ 63
           MA EGLGLEITELRLGL  G        K NEKKR+FSE++   + +GG G RK      
Sbjct: 1   MAREGLGLEITELRLGLSCG------EPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKN 60

Query: 64  QVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKG 123
           QVVGWPPVCSYR++N  +G                 KMY+KVS +G P+LRK+DL + KG
Sbjct: 61  QVVGWPPVCSYRKKNMNEG----------------SKMYMKVSMDGAPYLRKIDLCLHKG 120

Query: 124 YGDLVGAMEKLFG--------SPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRI 177
           Y +L  A+EKLF               E+   YED+DGDWMLVGDVPW+MFIESCKRLRI
Sbjct: 121 YLELALALEKLFDCCGIEEALKDAENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRI 165

[Close]

BLAST of HG10002254 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-39
Identity = 94/200 (47.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDK------------SHG 63
           M  EGLGLEITELRLGLPG        ++   KKR F+E+ +               S G
Sbjct: 1   MEKEGLGLEITELRLGLPGR-----DVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSG 60

Query: 64  GDGR--------RKQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEG 123
           GD          + QVVGWPPVCSYR++NS K     ++  G          YVKVS +G
Sbjct: 61  GDAEKVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG----------YVKVSMDG 120

Query: 124 TPFLRKVDLGMVKGYGDLVGAMEKLFG-SPIGCS-------EYSVTYEDRDGDWMLVGDV 176
            P+LRK+DLG  +GY DL  A++KLFG   IG +       EY   YED+DGDWML GDV
Sbjct: 121 VPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDV 180

[Close]

BLAST of HG10002254 vs. ExPASy TrEMBL
Match: A0A5D3DA37 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00040 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.0e-80
Identity = 159/186 (85.48%), Postives = 167/186 (89.78%), Query Frame = 0


Query: 1   MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRK 60
           MTQMAA+GL LEITELRLGLPG  G LIS SKNNEKKRVFSEVEVEDKS      +GRRK
Sbjct: 1   MTQMAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKEECEISEGII-MGMKIKKMYVKVSFEGTPFLRKVDLGMVK 120
           QVVGWPPVCSYR+R+SFKGK ECE SEGI+ MGMK K+MYVKVSFEGTPFLRKVDLGMVK
Sbjct: 61  QVVGWPPVCSYRQRSSFKGKGECE-SEGIMNMGMK-KQMYVKVSFEGTPFLRKVDLGMVK 120

Query: 121 GYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAK 180
           GYGDLVGAMEKLFGSPIGC EY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE K
Sbjct: 121 GYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGK 180

Query: 181 RSETNS 183
            SE NS
Sbjct: 181 GSEMNS 184

[Close]

BLAST of HG10002254 vs. ExPASy TrEMBL
Match: A0A1S3BHJ0 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489924 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.0e-80
Identity = 159/186 (85.48%), Postives = 167/186 (89.78%), Query Frame = 0


Query: 1   MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRK 60
           MTQMAA+GL LEITELRLGLPG  G LIS SKNNEKKRVFSEVEVEDKS      +GRRK
Sbjct: 1   MTQMAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKEECEISEGII-MGMKIKKMYVKVSFEGTPFLRKVDLGMVK 120
           QVVGWPPVCSYR+R+SFKGK ECE SEGI+ MGMK K+MYVKVSFEGTPFLRKVDLGMVK
Sbjct: 61  QVVGWPPVCSYRQRSSFKGKGECE-SEGIMNMGMK-KQMYVKVSFEGTPFLRKVDLGMVK 120

Query: 121 GYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAK 180
           GYGDLVGAMEKLFGSPIGC EY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE K
Sbjct: 121 GYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGK 180

Query: 181 RSETNS 183
            SE NS
Sbjct: 181 GSEMNS 184

[Close]

BLAST of HG10002254 vs. ExPASy TrEMBL
Match: Q9SSY3 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA1 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 156/186 (83.87%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MTQMAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHG---GDGRRK 60
           MTQ+AA+GL LEITELRLGLPG    LIS SKNNEKKRVFSEVEVEDKS      +GRRK
Sbjct: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGK-EECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVK 120
           QVVGWPPVCSYRRRNSFKGK E+CE  E + MGMK K+MYVKVSFEGTPFLRKVDLGMVK
Sbjct: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMK-KQMYVKVSFEGTPFLRKVDLGMVK 120

Query: 121 GYGDLVGAMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEAK 180
           GYGDLVGAMEKLFGSPIGC EY+VTYEDRDGDWMLVGDVPWKMFIESCKRLRI+KKTE K
Sbjct: 121 GYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGK 180

Query: 181 RSETNS 183
            SE NS
Sbjct: 181 GSEMNS 185

[Close]

BLAST of HG10002254 vs. ExPASy TrEMBL
Match: A0A6J1KF83 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 132/172 (76.74%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGWP 63
           MA EGLGLEITELRL       G I ASKNNEKKRVFSEVEVEDKS GG   RKQVVGWP
Sbjct: 1   MATEGLGLEITELRL-------GPIPASKNNEKKRVFSEVEVEDKSDGGG--RKQVVGWP 60

Query: 64  PVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVG 123
           PVCSYRRRNS + KEE   SEGI+ G   KKMYVKV  EG  F+RKVDLGMVKGYG+LV 
Sbjct: 61  PVCSYRRRNSLREKEE---SEGIMEGR--KKMYVKVRVEGEAFVRKVDLGMVKGYGELVD 120

Query: 124 AMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEA 176
           AMEKLFG+PIGCSE ++TYEDRDGDWMLVGDVPWKMFIESCKRLRI+KK+ +
Sbjct: 121 AMEKLFGTPIGCSECTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]

BLAST of HG10002254 vs. ExPASy TrEMBL
Match: A0A6J1GBF3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.9e-62
Identity = 129/172 (75.00%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGWP 63
           MA EGLGLEITELRL       G I ASKNNEKKRVFSEVEVEDKS GG   RKQVVGWP
Sbjct: 1   MATEGLGLEITELRL-------GPIPASKNNEKKRVFSEVEVEDKSDGGG--RKQVVGWP 60

Query: 64  PVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVG 123
           PVCSYRRRNS + KEE   SEG++ G   KKMYVKV  EG  F+RKVDLGMVKGYG+LV 
Sbjct: 61  PVCSYRRRNSLREKEE---SEGVMGGR--KKMYVKVRVEGEAFVRKVDLGMVKGYGELVD 120

Query: 124 AMEKLFGSPIGCSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTEA 176
           A+EKLFG+PIGCS  ++TYEDRDGDWMLVGDVPWKMFIESCKRLRI+KK+ +
Sbjct: 121 AVEKLFGTPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]

BLAST of HG10002254 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 94/200 (47.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDK------------SHG 63
           M  EGLGLEITELRLGLPG        ++   KKR F+E+ +               S G
Sbjct: 1   MEKEGLGLEITELRLGLPGR-----DVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSG 60

Query: 64  GDGR--------RKQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEG 123
           GD          + QVVGWPPVCSYR++NS K     ++  G          YVKVS +G
Sbjct: 61  GDAEKVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG----------YVKVSMDG 120

Query: 124 TPFLRKVDLGMVKGYGDLVGAMEKLFG-SPIGCS-------EYSVTYEDRDGDWMLVGDV 176
            P+LRK+DLG  +GY DL  A++KLFG   IG +       EY   YED+DGDWML GDV
Sbjct: 121 VPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDV 180

[Close]

BLAST of HG10002254 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-37
Identity = 86/174 (49.43%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 6   AEGLGLEITELRLGLPGGGGGLISASKNNEKKRVFSEVEVEDKSHGGDGRRKQVVGWPPV 65
           +  LGLEITELRLGLP  G  ++S    + KKR   EVE++ K      ++ QVVGWPPV
Sbjct: 5   SNNLGLEITELRLGLP--GDIVVSGESISGKKRASPEVEIDLKCE--PAKKSQVVGWPPV 64

Query: 66  CSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVGAM 125
           CSYRR+NS +               + K  YVKVS +G  FLRK+DL M K Y DL  A+
Sbjct: 65  CSYRRKNSLE---------------RTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASAL 124

Query: 126 EKLFGSPIGC------SEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKT 174
           + LFG  I        SE    YED+DGDWML GDVPW+MF+ SCKRLRI+K++
Sbjct: 125 QILFGCYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159

[Close]

BLAST of HG10002254 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 94/196 (47.96%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 4   MAAEGLGLEITELRLGLPGGGGGLIS-ASKNNEKKRVFSEV----------------EVE 63
           MA EGL LEITELRLGLPG     IS    + +KKRV S++                 VE
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 64  DKSHGGDGRRKQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPF 123
           D+S      + Q VGWPPVCSYRR+   K  EE   + G          YVKVS +G P+
Sbjct: 61  DESL--PVVKSQAVGWPPVCSYRRK---KNNEEASKAIG----------YVKVSMDGVPY 120

Query: 124 LRKVDLGMVKGYGDLVGAMEKLFGS-PIGCS------EYSVTYEDRDGDWMLVGDVPWKM 176
           +RK+DLG    Y +LV  +E LFG   IG +      EY + YED+D DWMLVGDVPW+M
Sbjct: 121 MRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWMLVGDVPWQM 180

[Close]

BLAST of HG10002254 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.0e-35
Identity = 87/189 (46.03%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 7   EGLGLEITELRLGLPGGGGGLISASK----NNEKKRVFS---EVEVED---KSHGGDGRR 66
           E + L+ TELRLGLPG      +  +    NN  KRV S   E E+E    K+     R+
Sbjct: 3   EFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRK 62

Query: 67  KQVVGWPPVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVK 126
            Q+VGWPPV SYR+ N    K E E  EG       + +YVKVS +G P+LRK+DL   K
Sbjct: 63  AQIVGWPPVRSYRKNNIQSKKNESE-HEG-------QGIYVKVSMDGAPYLRKIDLSCYK 122

Query: 127 GYGDLVGAMEKLFGSPIG---------CSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRL 177
           GY +L+ A+E +F   +G          S++  TYED+DGDWML+GDVPW+MFI +CKRL
Sbjct: 123 GYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRL 182

[Close]

BLAST of HG10002254 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 81/182 (44.51%), Postives = 110/182 (60.44%), Query Frame = 0


Query: 7   EGLGLEITELRLGLPGGGGGLISASKNNEK---KRVFSEVEVEDKSHGGDGRRKQVVGWP 66
           E + L+ TELRLGLP G    +S  K+N++   +    E+E   K+      + Q+VGWP
Sbjct: 9   ELVNLKATELRLGLP-GTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 68

Query: 67  PVCSYRRRNSFKGKEECEISEGIIMGMKIKKMYVKVSFEGTPFLRKVDLGMVKGYGDLVG 126
           PV SYR+ N    K E   SEG       +  YVKVS +G P+LRK+DL M K Y +L+ 
Sbjct: 69  PVRSYRKNNVQTKKSE---SEG-------QGNYVKVSMDGAPYLRKIDLTMYKQYPELMK 128

Query: 127 AMEKLFGSPIG---------CSEYSVTYEDRDGDWMLVGDVPWKMFIESCKRLRIVKKTE 177
           ++E +F   +G          S++  TYED+DGDWMLVGDVPW+MF+ SCKRLRI+K +E
Sbjct: 129 SLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSE 179

The following BLAST results are available for this feature:

BLAST of HG10002254 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903795.1	1.5e-81	88.46	auxin-induced protein AUX22-like [Benincasa hispida]	[more]
XP_008447487.1	1.4e-79	85.48	PREDICTED: auxin-induced protein AUX22-like [Cucumis melo] >KAA0050762.1 auxin-i...	[more]
NP_001275532.1	2.7e-78	83.87	auxin-induced protein AUX22-like [Cucumis sativus] >KGN58114.1 hypothetical prot...	[more]
XP_023525675.1	6.5e-64	76.74	auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036487.1	4.2e-63	76.30	Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10002254 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	2.2e-46	54.74	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
P32293	1.8e-45	55.50	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
O24541	1.2e-44	52.97	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
P49680	5.6e-42	51.87	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24409	2.6e-39	47.00	Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=...	[more]

BLAST of HG10002254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DA37	7.0e-80	85.48	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BHJ0	7.0e-80	85.48	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489924 PE=3 SV=1	[more]
Q9SSY3	1.3e-78	83.87	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA1 PE=2 SV=1	[more]
A0A6J1KF83	2.0e-63	76.74	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1	[more]
A0A6J1GBF3	3.9e-62	75.00	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1	[more]

BLAST of HG10002254 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15540.1	1.8e-40	47.00	indole-3-acetic acid inducible 19	[more]
AT1G15580.1	2.5e-37	49.43	indole-3-acetic acid inducible 5	[more]
AT1G52830.1	1.2e-36	47.96	indole-3-acetic acid 6	[more]
AT1G04240.1	4.0e-35	46.03	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	1.3e-33	44.51	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 45..131 e-value: 2.6E-19 score: 70.0 coord: 136..175 e-value: 2.0E-22 score: 80.3
None	No IPR available	GENE3D	3.10.20.90		coord: 89..183 e-value: 7.4E-33 score: 114.6
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 7..176
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 94..170
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..176
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 94..177 score: 23.018164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002254.1	HG10002254.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding