HG10002231 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002231
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr11: 4724517 .. 4726208 (-)
RNA-Seq Expression	HG10002231
Synteny	HG10002231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

mRNA sequence

ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

Coding sequence (CDS)

ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

Protein sequence

MLSLRSIRTRRAFSSKFQFSRKNADDSPLQPCSVMAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD

Homology

[Close]

BLAST of HG10002231 vs. NCBI nr
Match: XP_038894916.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Benincasa hispida])

HSP 1 Score: 1035.4 bits (2676), Expect = 1.8e-298
Identity = 501/529 (94.71%), Postives = 511/529 (96.60%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRAFS KFQISISLF  LL+TNPF HQRPFTS ATA  AGSDS LPFLVSEISRILSD
Sbjct: 1   MAIRAFSSKFQISISLFSFLLRTNPFAHQRPFTSPATATHAGSDSPLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDLDL LSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI
Sbjct: 61  RRSPHHDLDLSLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSSGQFAILWDFL EIRETRCS+IT ELFWLVFRAYSR DLPQDAIRAFNRM EF
Sbjct: 121 LVDILGSSGQFAILWDFLTEIRETRCSLITQELFWLVFRAYSRADLPQDAIRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           GMRPGVDDLDQLLYILCKRKHVAHAQQFFDK+KSGFNPSVKTYSILTRGWGDVGDSNNAQ
Sbjct: 181 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKIKSGFNPSVKTYSILTRGWGDVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEMQERGCLIDVLAYNSLLEALC AGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS
Sbjct: 241 KVFDEMQERGCLIDVLAYNSLLEALCNAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLERMKRHNL PNVFTYNCVIKKLCKD+KVEEAYQLLDEMIE+GVTPDT
Sbjct: 301 CQENDLHTVYRVLERMKRHNLLPNVFTYNCVIKKLCKDQKVEEAYQLLDEMIEKGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MGER FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG
Sbjct: 421 MGERRFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKDH+EILGDKMRRSTSCSIQELANVMSGGKCHEVHR S+NE+T+FESD
Sbjct: 481 FKDHVEILGDKMRRSTSCSIQELANVMSGGKCHEVHRMSRNEDTEFESD 529

[Close]

BLAST of HG10002231 vs. NCBI nr
Match: XP_016901550.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucumis melo] >KAA0044434.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK29561.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 971.8 bits (2511), Expect = 2.4e-279
Identity = 472/529 (89.22%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+RAFS KF ISISLF SLL+TN F HQR FTSL+TAA AGSD  LPFLVSEISRILSD
Sbjct: 1   MAVRAFSSKFHISISLFSSLLRTNRFAHQRSFTSLSTAAPAGSDPSLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+LGLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRSPHHDLELGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRE+R S+ITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRESRSSMITHELFWRVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           GMR GVDDLD+LL+ILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GMRAGVDDLDKLLHILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMFQEMGSNGV PDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFQEMGSNGVVPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNC+IKKLCKD+KVEEAYQLLDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRQNLLPNVFTYNCIIKKLCKDQKVEEAYQLLDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELANVMSGGKC E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANVMSGGKCREAQSTLKNEETELESD 529

[Close]

BLAST of HG10002231 vs. NCBI nr
Match: XP_022955808.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita moschata] >XP_022955809.1 pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita moschata])

HSP 1 Score: 957.6 bits (2474), Expect = 4.8e-275
Identity = 462/530 (87.17%), Postives = 492/530 (92.83%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRAFS KFQ+SISLFC  L+ + F H+RPF+SLATA  AG DS LPFLVSEISRILSD
Sbjct: 1   MAIRAFSSKFQVSISLFCPFLRISIFAHRRPFSSLATATAAGLDSPLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+  LSSFSSNVS+DLVEQVLKRCKNIGFSAHRFF+WAKRIPGFE SADSYRI
Sbjct: 61  RRSPHHDLEFALSSFSSNVSSDLVEQVLKRCKNIGFSAHRFFIWAKRIPGFEHSADSYRI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSSGQFAILWDFLIEIRETRC+VI  ELFWLVFRAYSR DLP+DA+RAFNRM EF
Sbjct: 121 LVDILGSSGQFAILWDFLIEIRETRCAVINRELFWLVFRAYSRADLPEDAVRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+RPGVDDLDQLLY+LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWGDV DS+NAQ
Sbjct: 181 GIRPGVDDLDQLLYVLCKRKHVAHAQQFFDKVKSEFNPSVKTYSILTRGWGDVDDSSNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCKAGKRDEA+KMFQEMGSNGV PDAGTYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKAGKRDEAHKMFQEMGSNGVTPDAGTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYR LERMK+HNLFPNVFTYN VIKKLCKD+KVE+AY+LLDEMIE GVTPDT
Sbjct: 301 CQENDLHTVYRALERMKKHNLFPNVFTYNWVIKKLCKDQKVEQAYELLDEMIESGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYN I AYHC+H+EVN AL LIKRMDR NCVPDRHTYNM LK+L+RVGRFDRANEVWES
Sbjct: 361 WSYNVILAYHCDHNEVNGALKLIKRMDRLNCVPDRHTYNMALKMLIRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHG CKKKWKLEEACKYFEMMIDEGIPPYISTVELL+NRLLGIG
Sbjct: 421 MGDRGFYPSVSTYAVMIHGLCKKKWKLEEACKYFEMMIDEGIPPYISTVELLKNRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVH-RKSKNEETDFESD 564
           FKD + ILGDKMRRS+SCSIQELANVMSGGKCHEVH   SK+EET+ ESD
Sbjct: 481 FKDQVVILGDKMRRSSSCSIQELANVMSGGKCHEVHTMSSKSEETELESD 530

[Close]

BLAST of HG10002231 vs. NCBI nr
Match: XP_022980164.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita maxima] >XP_022980165.1 pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita maxima])

HSP 1 Score: 955.3 bits (2468), Expect = 2.4e-274
Identity = 462/530 (87.17%), Postives = 490/530 (92.45%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRAFS KFQ+SISLFC  L+   F HQ PF+SLATA  AG DS LPFLVSEISRILSD
Sbjct: 1   MAIRAFSSKFQVSISLFCPFLRIGIFAHQCPFSSLATATAAGLDSPLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+  LSSFSSNVS+DLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI
Sbjct: 61  RRSPHHDLEFALSSFSSNVSSDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSSGQFAILWDFLIEIRETRC+VI+ ELFWLVFRAYSR DLP+DA+RAFNRM EF
Sbjct: 121 LVDILGSSGQFAILWDFLIEIRETRCAVISRELFWLVFRAYSRADLPEDAVRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+RPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWGDVGDS+NAQ
Sbjct: 181 GIRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSEFNPSVKTYSILTRGWGDVGDSSNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLA NSLLEALCKAGKRDEA KMFQEM SNGV PDAGTYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLACNSLLEALCKAGKRDEANKMFQEMSSNGVTPDAGTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHT YR LERMK+HNLFPNVFTYN V+KKLCKD+KVE+AY+LLDEMIE GVTPDT
Sbjct: 301 CQENDLHTAYRALERMKKHNLFPNVFTYNWVMKKLCKDQKVEQAYELLDEMIESGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYN I AYHC+H+EVN AL LIKRMDRDNCVPDRHTYN+ LKLL+RVGRFDRANEVW S
Sbjct: 361 WSYNVILAYHCDHNEVNGALKLIKRMDRDNCVPDRHTYNIALKLLIRVGRFDRANEVWGS 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHG CKKKWKLEEACKYFEMMIDEGIPPYI+TVELL+NRLLGIG
Sbjct: 421 MGDRGFYPSVSTYAVMIHGLCKKKWKLEEACKYFEMMIDEGIPPYIATVELLKNRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVH-RKSKNEETDFESD 564
           FKD +EILGDKMRRS+SCSIQELANVMSGGKCHEVH   SK+EET+ ESD
Sbjct: 481 FKDQVEILGDKMRRSSSCSIQELANVMSGGKCHEVHTMSSKSEETELESD 530

[Close]

BLAST of HG10002231 vs. NCBI nr
Match: XP_023527544.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 954.9 bits (2467), Expect = 3.1e-274
Identity = 462/532 (86.84%), Postives = 489/532 (91.92%), Query Frame = 0


Query: 33  SVMAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRIL 92
           SVMAIRAFS KFQ+SISL C  L+   F HQRPF+SLATA  AG DS LPFLVSEISRIL
Sbjct: 5   SVMAIRAFSSKFQVSISLLCPFLRIGIFVHQRPFSSLATATTAGLDSPLPFLVSEISRIL 64

Query: 93  SDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSY 152
           SD RSPHHDL+  LSSFSSNVS+DLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSY
Sbjct: 65  SDRRSPHHDLEFALSSFSSNVSSDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSY 124

Query: 153 RILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMG 212
           RILVDILGSSGQFAILWDFLIEIRET+C+VI  ELFWLVFRAYSR DLP+DA+RAFNRM 
Sbjct: 125 RILVDILGSSGQFAILWDFLIEIRETQCAVINRELFWLVFRAYSRADLPEDAVRAFNRMV 184

Query: 213 EFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNN 272
           EFG+RPGVDDLDQLLY+LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWGDVGDS N
Sbjct: 185 EFGIRPGVDDLDQLLYVLCKRKHVAHAQQFFDKVKSEFNPSVKTYSILTRGWGDVGDSGN 244

Query: 273 AQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIR 332
           AQKVFDEM+ERGCLIDVLAYNSLLEALCKAGKRDEA+KMFQEMGSNGV PDAGTYSIFIR
Sbjct: 245 AQKVFDEMRERGCLIDVLAYNSLLEALCKAGKRDEAHKMFQEMGSNGVTPDAGTYSIFIR 304

Query: 333 SSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTP 392
           SSCQENDLHT YR LERMK+HNLFPNVFTYN VIKKLCKD+KVE+AY+LLDEMIE GVTP
Sbjct: 305 SSCQENDLHTAYRALERMKKHNLFPNVFTYNWVIKKLCKDQKVEQAYELLDEMIESGVTP 364

Query: 393 DTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVW 452
           DTWSYN I AYHC+H+EVN AL LIKRMDR NCVPDRHTYNM LKLL+RVGRFDRANEVW
Sbjct: 365 DTWSYNVILAYHCDHNEVNGALKLIKRMDRHNCVPDRHTYNMALKLLIRVGRFDRANEVW 424

Query: 453 ESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLG 512
           ESMG+R FYPSVSTYAVMIHG CKKKWKLEEACKYFEMMIDEGIPPYI+TVELL+NRLLG
Sbjct: 425 ESMGDRGFYPSVSTYAVMIHGLCKKKWKLEEACKYFEMMIDEGIPPYIATVELLKNRLLG 484

Query: 513 IGFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVH-RKSKNEETDFESD 564
           IG KD +EILGDKMRRSTSCSIQELAN MSG K HEVH   SK+E+T+ ESD
Sbjct: 485 IGLKDQVEILGDKMRRSTSCSIQELANAMSGRKYHEVHTMSSKSEDTELESD 536

[Close]

BLAST of HG10002231 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 3.1e-184
Identity = 315/526 (59.89%), Postives = 400/526 (76.05%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIR  S       SL  +L +T      R F++L        D   P LV+EISR+LSD
Sbjct: 1   MAIRTVS-------SLVRALYQTPKSQSFRIFSTLL------HDPPSPDLVNEISRVLSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+P  DL+  L ++S  VS++LVEQVLKRCKN+GF AHRFFLWA+RIP F  S +SY I
Sbjct: 61  HRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LV+ILGSS QFA+LWDFLIE RE     I+ ++FW+VFRAYSR +LP +A RAFNRM EF
Sbjct: 121 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS-GFNPSVKTYSILTRGWGDVGDSNNA 274
           G++P VDDLDQLL+ LC +KHV HAQ+FF K K  G  PS KTYSIL RGW  + D++ A
Sbjct: 181 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +KVFDEM ER C++D+LAYN+LL+ALCK+G  D  YKMFQEMG+ G+ PDA +++IFI +
Sbjct: 241 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C   D+H+ Y+VL+RMKR++L PNV+T+N +IK LCK++KV++AY LLDEMI++G  PD
Sbjct: 301 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TW+YN+I AYHC+H EVN A  L+ RMDR  C+PDRHTYNMVLKLL+R+GRFDRA E+WE
Sbjct: 361 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
            M ER+FYP+V+TY VMIHG  +KK KLEEAC+YFEMMIDEGIPPY +TVE+LRNRL+G 
Sbjct: 421 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETD 560
           G  D +++L  KM RS+SCS+Q++A V   GK   + R+S+N E D
Sbjct: 481 GQMDVVDVLAGKMERSSSCSVQDMA-VEMRGKRRRLGRRSENSEDD 512

[Close]

BLAST of HG10002231 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-69
Identity = 143/443 (32.28%), Postives = 243/443 (54.85%), Query Frame = 0


Query: 84  LVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIP 143
           +   IS++L    SP   LD  L      VS ++VE VL R +N G   +RFF W+++  
Sbjct: 71  VAKNISKVLMS--SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQR 130

Query: 144 GFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQD 203
            +E S  +Y ++++      Q+ ++WD +  +R+ +  ++  E F +V R Y+R     +
Sbjct: 131 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDE 190

Query: 204 AIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRG 263
           AI AFN M ++ + P +   + LL  LCK K+V  AQ+ F+ ++  F P  KTYSIL  G
Sbjct: 191 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 250

Query: 264 WGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPD 323
           WG   +   A++VF EM + GC  D++ Y+ +++ LCKAG+ DEA  + + M  +   P 
Sbjct: 251 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 310

Query: 324 AGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 383
              YS+ + +   EN L         M+R  +  +V  +N +I   CK  +++  Y++L 
Sbjct: 311 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 370

Query: 384 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 443
           EM  +GVTP++ S N I  +  E  E + A ++ ++M +  C PD  TY MV+K+     
Sbjct: 371 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 430

Query: 444 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTV 503
             + A++VW+ M ++  +PS+ T++V+I+G C+++   ++AC   E MI+ GI P   T 
Sbjct: 431 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER-TTQKACVLLEEMIEMGIRPSGVTF 490

Query: 504 ELLRNRLLGIGFKDHIEILGDKM 527
             LR  L+    +D ++ L +KM
Sbjct: 491 GRLRQLLIKEEREDVLKFLNEKM 507

[Close]

BLAST of HG10002231 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-64
Identity = 132/430 (30.70%), Postives = 226/430 (52.56%), Query Frame = 0


Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +I RIL +H S    L+L L+    ++   L+ +VL RC + G   +RFFLWA + PG
Sbjct: 67  VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG 126

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S +  + +V IL    QF  +W  + E+R+T   +I  ELF ++ R ++  ++ + A
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKA 186

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           +   + M ++G+ P       LL  LCK   V  A + F+ ++  F P+++ ++ L  GW
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGW 246

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
              G    A++V  +M+E G   D++ + +LL     AGK  +AY +  +M   G +P+ 
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306

Query: 325 GTYSIFIRSSCQ-ENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 384
             Y++ I++ C+ E  +    RV   M+R+    ++ TY  +I   CK   +++ Y +LD
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366

Query: 385 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 444
           +M ++GV P   +Y  I   H +  +    L LI++M R  C PD   YN+V++L  ++G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426

Query: 445 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIS 504
               A  +W  M      P V T+ +MI+GF  + + L EAC +F+ M+  GI   P   
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF-LIEACNHFKEMVSRGIFSAPQYG 486

Query: 505 TVELLRNRLL 512
           T++ L N L+
Sbjct: 487 TLKSLLNNLV 495

[Close]

BLAST of HG10002231 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.2e-60
Identity = 133/424 (31.37%), Postives = 217/424 (51.18%), Query Frame = 0


Query: 106 LSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQF 165
           L+  S  +S  L+E+VLK+  N G  A   F WA+   GF+ +  +Y  L++ LG   QF
Sbjct: 85  LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144

Query: 166 AILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQ 225
            ++W  + +++  +  +++ E F L+ R Y+R    ++AI AF++M EFG +    D ++
Sbjct: 145 KLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNR 204

Query: 226 LLYILCKRKHVAHAQQFFDKV-KSGFNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERG 285
           +L  L K ++V  AQ+ FDK+ K  F P +K+Y+IL  GWG   +     +V  EM++ G
Sbjct: 205 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 264

Query: 286 CLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVY 345
              DV+AY  ++ A CKA K +EA + F EM      P    +   I     E  L+   
Sbjct: 265 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324

Query: 346 RVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYH 405
              ER K         TYN ++   C  +++E+AY+ +DEM  +GV P+  +Y+ I  + 
Sbjct: 325 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 384

Query: 406 CEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSV 465
                   A  + + M   +C P   TY +++++     R D A ++W+ M  +   P +
Sbjct: 385 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 444

Query: 466 STYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGD 525
             ++ +I   C +  KL+EAC+YF  M+D GI P       L+  LL  G KD +  L  
Sbjct: 445 HMFSSLITALCHEN-KLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 502

Query: 526 KMRR 529
           KM R
Sbjct: 505 KMDR 502

[Close]

BLAST of HG10002231 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.1e-59
Identity = 127/429 (29.60%), Postives = 219/429 (51.05%), Query Frame = 0


Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +  RIL    S    L+L L+     +   L+E+VL RC + G   +RFF+WA + P 
Sbjct: 83  VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 142

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S + Y+ +V IL    QF  +W  + E+R+    +I  ELF ++ + ++  D+ + A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           I   + M +FG  P       LL  LCK   V  A + F+ ++  F  +++ ++ L  GW
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
             VG    A+ V  +M E G   D++ Y +LL     AGK  +AY + ++M   G +P+A
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322

Query: 325 GTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDE 384
             Y++ I++ C+ + +    +V   M+R+    +V TY  ++   CK  K+++ Y +LD+
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382

Query: 385 MIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGR 444
           MI++G+ P   +Y  I   H +       L L+++M +    PD   YN+V++L  ++G 
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442

Query: 445 FDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIST 504
              A  +W  M E    P V T+ +MI+G   +   L EA  +F+ M+  G+       T
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL-EASDHFKEMVTRGLFSVSQYGT 502

Query: 505 VELLRNRLL 512
           ++LL N +L
Sbjct: 503 LKLLLNTVL 510

[Close]

BLAST of HG10002231 vs. ExPASy TrEMBL
Match: A0A5D3E1T3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001670 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.2e-279
Identity = 472/529 (89.22%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+RAFS KF ISISLF SLL+TN F HQR FTSL+TAA AGSD  LPFLVSEISRILSD
Sbjct: 1   MAVRAFSSKFHISISLFSSLLRTNRFAHQRSFTSLSTAAPAGSDPSLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+LGLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRSPHHDLELGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRE+R S+ITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRESRSSMITHELFWRVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           GMR GVDDLD+LL+ILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GMRAGVDDLDKLLHILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMFQEMGSNGV PDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFQEMGSNGVVPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNC+IKKLCKD+KVEEAYQLLDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRQNLLPNVFTYNCIIKKLCKDQKVEEAYQLLDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELANVMSGGKC E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANVMSGGKCREAQSTLKNEETELESD 529

[Close]

BLAST of HG10002231 vs. ExPASy TrEMBL
Match: A0A1S4E0Q1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucumis melo OX=3656 GN=LOC107990307 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.2e-279
Identity = 472/529 (89.22%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+RAFS KF ISISLF SLL+TN F HQR FTSL+TAA AGSD  LPFLVSEISRILSD
Sbjct: 1   MAVRAFSSKFHISISLFSSLLRTNRFAHQRSFTSLSTAAPAGSDPSLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+LGLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRSPHHDLELGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRE+R S+ITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRESRSSMITHELFWRVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           GMR GVDDLD+LL+ILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GMRAGVDDLDKLLHILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMFQEMGSNGV PDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFQEMGSNGVVPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNC+IKKLCKD+KVEEAYQLLDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRQNLLPNVFTYNCIIKKLCKDQKVEEAYQLLDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELANVMSGGKC E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANVMSGGKCREAQSTLKNEETELESD 529

[Close]

BLAST of HG10002231 vs. ExPASy TrEMBL
Match: A0A6J1GXC0 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111457688 PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 2.3e-275
Identity = 462/530 (87.17%), Postives = 492/530 (92.83%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRAFS KFQ+SISLFC  L+ + F H+RPF+SLATA  AG DS LPFLVSEISRILSD
Sbjct: 1   MAIRAFSSKFQVSISLFCPFLRISIFAHRRPFSSLATATAAGLDSPLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+  LSSFSSNVS+DLVEQVLKRCKNIGFSAHRFF+WAKRIPGFE SADSYRI
Sbjct: 61  RRSPHHDLEFALSSFSSNVSSDLVEQVLKRCKNIGFSAHRFFIWAKRIPGFEHSADSYRI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSSGQFAILWDFLIEIRETRC+VI  ELFWLVFRAYSR DLP+DA+RAFNRM EF
Sbjct: 121 LVDILGSSGQFAILWDFLIEIRETRCAVINRELFWLVFRAYSRADLPEDAVRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+RPGVDDLDQLLY+LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWGDV DS+NAQ
Sbjct: 181 GIRPGVDDLDQLLYVLCKRKHVAHAQQFFDKVKSEFNPSVKTYSILTRGWGDVDDSSNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCKAGKRDEA+KMFQEMGSNGV PDAGTYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKAGKRDEAHKMFQEMGSNGVTPDAGTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYR LERMK+HNLFPNVFTYN VIKKLCKD+KVE+AY+LLDEMIE GVTPDT
Sbjct: 301 CQENDLHTVYRALERMKKHNLFPNVFTYNWVIKKLCKDQKVEQAYELLDEMIESGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYN I AYHC+H+EVN AL LIKRMDR NCVPDRHTYNM LK+L+RVGRFDRANEVWES
Sbjct: 361 WSYNVILAYHCDHNEVNGALKLIKRMDRLNCVPDRHTYNMALKMLIRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHG CKKKWKLEEACKYFEMMIDEGIPPYISTVELL+NRLLGIG
Sbjct: 421 MGDRGFYPSVSTYAVMIHGLCKKKWKLEEACKYFEMMIDEGIPPYISTVELLKNRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVH-RKSKNEETDFESD 564
           FKD + ILGDKMRRS+SCSIQELANVMSGGKCHEVH   SK+EET+ ESD
Sbjct: 481 FKDQVVILGDKMRRSSSCSIQELANVMSGGKCHEVHTMSSKSEETELESD 530

[Close]

BLAST of HG10002231 vs. ExPASy TrEMBL
Match: A0A6J1IYJ0 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479635 PE=4 SV=1)

HSP 1 Score: 955.3 bits (2468), Expect = 1.1e-274
Identity = 462/530 (87.17%), Postives = 490/530 (92.45%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRAFS KFQ+SISLFC  L+   F HQ PF+SLATA  AG DS LPFLVSEISRILSD
Sbjct: 1   MAIRAFSSKFQVSISLFCPFLRIGIFAHQCPFSSLATATAAGLDSPLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+  LSSFSSNVS+DLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI
Sbjct: 61  RRSPHHDLEFALSSFSSNVSSDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSSGQFAILWDFLIEIRETRC+VI+ ELFWLVFRAYSR DLP+DA+RAFNRM EF
Sbjct: 121 LVDILGSSGQFAILWDFLIEIRETRCAVISRELFWLVFRAYSRADLPEDAVRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+RPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWGDVGDS+NAQ
Sbjct: 181 GIRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSEFNPSVKTYSILTRGWGDVGDSSNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLA NSLLEALCKAGKRDEA KMFQEM SNGV PDAGTYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLACNSLLEALCKAGKRDEANKMFQEMSSNGVTPDAGTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHT YR LERMK+HNLFPNVFTYN V+KKLCKD+KVE+AY+LLDEMIE GVTPDT
Sbjct: 301 CQENDLHTAYRALERMKKHNLFPNVFTYNWVMKKLCKDQKVEQAYELLDEMIESGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYN I AYHC+H+EVN AL LIKRMDRDNCVPDRHTYN+ LKLL+RVGRFDRANEVW S
Sbjct: 361 WSYNVILAYHCDHNEVNGALKLIKRMDRDNCVPDRHTYNIALKLLIRVGRFDRANEVWGS 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHG CKKKWKLEEACKYFEMMIDEGIPPYI+TVELL+NRLLGIG
Sbjct: 421 MGDRGFYPSVSTYAVMIHGLCKKKWKLEEACKYFEMMIDEGIPPYIATVELLKNRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVH-RKSKNEETDFESD 564
           FKD +EILGDKMRRS+SCSIQELANVMSGGKCHEVH   SK+EET+ ESD
Sbjct: 481 FKDQVEILGDKMRRSSSCSIQELANVMSGGKCHEVHTMSSKSEETELESD 530

[Close]

BLAST of HG10002231 vs. ExPASy TrEMBL
Match: A0A0A0KYE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004910 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 7.4e-274
Identity = 465/529 (87.90%), Postives = 487/529 (92.06%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRA S KF+ISISLF SLL+TN F HQR FTS AT A+AGSD  LPFLVSEISRILSD
Sbjct: 1   MAIRACSSKFRISISLFSSLLRTNRFAHQRSFTSFATEARAGSDPTLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            R+PHHDL++GLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRETR SVITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+R GVDDLD+LLY LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMF EM SNGVDPDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNCVIKKLCKD+ VEEAYQ+LDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELAN+MSGGK  E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSMLKNEETEHESD 529

[Close]

BLAST of HG10002231 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 646.4 bits (1666), Expect = 2.2e-185
Identity = 315/526 (59.89%), Postives = 400/526 (76.05%), Query Frame = 0


Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIR  S       SL  +L +T      R F++L        D   P LV+EISR+LSD
Sbjct: 1   MAIRTVS-------SLVRALYQTPKSQSFRIFSTLL------HDPPSPDLVNEISRVLSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+P  DL+  L ++S  VS++LVEQVLKRCKN+GF AHRFFLWA+RIP F  S +SY I
Sbjct: 61  HRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LV+ILGSS QFA+LWDFLIE RE     I+ ++FW+VFRAYSR +LP +A RAFNRM EF
Sbjct: 121 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS-GFNPSVKTYSILTRGWGDVGDSNNA 274
           G++P VDDLDQLL+ LC +KHV HAQ+FF K K  G  PS KTYSIL RGW  + D++ A
Sbjct: 181 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +KVFDEM ER C++D+LAYN+LL+ALCK+G  D  YKMFQEMG+ G+ PDA +++IFI +
Sbjct: 241 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C   D+H+ Y+VL+RMKR++L PNV+T+N +IK LCK++KV++AY LLDEMI++G  PD
Sbjct: 301 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TW+YN+I AYHC+H EVN A  L+ RMDR  C+PDRHTYNMVLKLL+R+GRFDRA E+WE
Sbjct: 361 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
            M ER+FYP+V+TY VMIHG  +KK KLEEAC+YFEMMIDEGIPPY +TVE+LRNRL+G 
Sbjct: 421 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETD 560
           G  D +++L  KM RS+SCS+Q++A V   GK   + R+S+N E D
Sbjct: 481 GQMDVVDVLAGKMERSSSCSVQDMA-VEMRGKRRRLGRRSENSEDD 512

[Close]

BLAST of HG10002231 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-70
Identity = 143/443 (32.28%), Postives = 243/443 (54.85%), Query Frame = 0


Query: 84  LVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIP 143
           +   IS++L    SP   LD  L      VS ++VE VL R +N G   +RFF W+++  
Sbjct: 71  VAKNISKVLMS--SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQR 130

Query: 144 GFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQD 203
            +E S  +Y ++++      Q+ ++WD +  +R+ +  ++  E F +V R Y+R     +
Sbjct: 131 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDE 190

Query: 204 AIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRG 263
           AI AFN M ++ + P +   + LL  LCK K+V  AQ+ F+ ++  F P  KTYSIL  G
Sbjct: 191 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 250

Query: 264 WGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPD 323
           WG   +   A++VF EM + GC  D++ Y+ +++ LCKAG+ DEA  + + M  +   P 
Sbjct: 251 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 310

Query: 324 AGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 383
              YS+ + +   EN L         M+R  +  +V  +N +I   CK  +++  Y++L 
Sbjct: 311 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 370

Query: 384 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 443
           EM  +GVTP++ S N I  +  E  E + A ++ ++M +  C PD  TY MV+K+     
Sbjct: 371 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 430

Query: 444 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTV 503
             + A++VW+ M ++  +PS+ T++V+I+G C+++   ++AC   E MI+ GI P   T 
Sbjct: 431 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER-TTQKACVLLEEMIEMGIRPSGVTF 490

Query: 504 ELLRNRLLGIGFKDHIEILGDKM 527
             LR  L+    +D ++ L +KM
Sbjct: 491 GRLRQLLIKEEREDVLKFLNEKM 507

[Close]

BLAST of HG10002231 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 1.0e-65
Identity = 132/430 (30.70%), Postives = 226/430 (52.56%), Query Frame = 0


Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +I RIL +H S    L+L L+    ++   L+ +VL RC + G   +RFFLWA + PG
Sbjct: 67  VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG 126

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S +  + +V IL    QF  +W  + E+R+T   +I  ELF ++ R ++  ++ + A
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKA 186

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           +   + M ++G+ P       LL  LCK   V  A + F+ ++  F P+++ ++ L  GW
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGW 246

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
              G    A++V  +M+E G   D++ + +LL     AGK  +AY +  +M   G +P+ 
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306

Query: 325 GTYSIFIRSSCQ-ENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 384
             Y++ I++ C+ E  +    RV   M+R+    ++ TY  +I   CK   +++ Y +LD
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366

Query: 385 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 444
           +M ++GV P   +Y  I   H +  +    L LI++M R  C PD   YN+V++L  ++G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426

Query: 445 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIS 504
               A  +W  M      P V T+ +MI+GF  + + L EAC +F+ M+  GI   P   
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF-LIEACNHFKEMVSRGIFSAPQYG 486

Query: 505 TVELLRNRLL 512
           T++ L N L+
Sbjct: 487 TLKSLLNNLV 495

[Close]

BLAST of HG10002231 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 233.4 bits (594), Expect = 4.4e-61
Identity = 133/424 (31.37%), Postives = 217/424 (51.18%), Query Frame = 0


Query: 106 LSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQF 165
           L+  S  +S  L+E+VLK+  N G  A   F WA+   GF+ +  +Y  L++ LG   QF
Sbjct: 85  LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144

Query: 166 AILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQ 225
            ++W  + +++  +  +++ E F L+ R Y+R    ++AI AF++M EFG +    D ++
Sbjct: 145 KLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNR 204

Query: 226 LLYILCKRKHVAHAQQFFDKV-KSGFNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERG 285
           +L  L K ++V  AQ+ FDK+ K  F P +K+Y+IL  GWG   +     +V  EM++ G
Sbjct: 205 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 264

Query: 286 CLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVY 345
              DV+AY  ++ A CKA K +EA + F EM      P    +   I     E  L+   
Sbjct: 265 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324

Query: 346 RVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYH 405
              ER K         TYN ++   C  +++E+AY+ +DEM  +GV P+  +Y+ I  + 
Sbjct: 325 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 384

Query: 406 CEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSV 465
                   A  + + M   +C P   TY +++++     R D A ++W+ M  +   P +
Sbjct: 385 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 444

Query: 466 STYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGD 525
             ++ +I   C +  KL+EAC+YF  M+D GI P       L+  LL  G KD +  L  
Sbjct: 445 HMFSSLITALCHEN-KLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 502

Query: 526 KMRR 529
           KM R
Sbjct: 505 KMDR 502

[Close]

BLAST of HG10002231 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 231.1 bits (588), Expect = 2.2e-60
Identity = 127/429 (29.60%), Postives = 219/429 (51.05%), Query Frame = 0


Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +  RIL    S    L+L L+     +   L+E+VL RC + G   +RFF+WA + P 
Sbjct: 83  VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 142

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S + Y+ +V IL    QF  +W  + E+R+    +I  ELF ++ + ++  D+ + A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           I   + M +FG  P       LL  LCK   V  A + F+ ++  F  +++ ++ L  GW
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
             VG    A+ V  +M E G   D++ Y +LL     AGK  +AY + ++M   G +P+A
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322

Query: 325 GTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDE 384
             Y++ I++ C+ + +    +V   M+R+    +V TY  ++   CK  K+++ Y +LD+
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382

Query: 385 MIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGR 444
           MI++G+ P   +Y  I   H +       L L+++M +    PD   YN+V++L  ++G 
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442

Query: 445 FDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIST 504
              A  +W  M E    P V T+ +MI+G   +   L EA  +F+ M+  G+       T
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL-EASDHFKEMVTRGLFSVSQYGT 502

Query: 505 VELLRNRLL 512
           ++LL N +L
Sbjct: 503 LKLLLNTVL 510

The following BLAST results are available for this feature:

BLAST of HG10002231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894916.1	1.8e-298	94.71	pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Benincasa ...	[more]
XP_016901550.1	2.4e-279	89.22	PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ...	[more]
XP_022955808.1	4.8e-275	87.17	pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita ...	[more]
XP_022980164.1	2.4e-274	87.17	pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucurbita ...	[more]
XP_023527544.1	3.1e-274	86.84	pentatricopeptide repeat-containing protein At1g52640, mitochondrial isoform X1 ...	[more]

BLAST of HG10002231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSR6	3.1e-184	59.89	Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop...	[more]
Q9FVX2	1.9e-69	32.28	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
P0C8A0	1.4e-64	30.70	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9C9A2	6.2e-60	31.37	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9FH87	3.1e-59	29.60	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]

BLAST of HG10002231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1T3	1.2e-279	89.22	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E0Q1	1.2e-279	89.22	pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucumis ...	[more]
A0A6J1GXC0	2.3e-275	87.17	pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucurbit...	[more]
A0A6J1IYJ0	1.1e-274	87.17	pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Cucurbit...	[more]
A0A0A0KYE8	7.4e-274	87.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004910 PE=4 SV=1	[more]

BLAST of HG10002231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52640.1	2.2e-185	59.89	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G77360.1	1.4e-70	32.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49730.1	1.0e-65	30.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	4.4e-61	31.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	2.2e-60	29.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 256..289 e-value: 7.7E-4 score: 17.5 coord: 326..359 e-value: 1.5E-4 score: 19.7 coord: 466..498 e-value: 8.9E-6 score: 23.6 coord: 430..463 e-value: 5.6E-7 score: 27.3 coord: 360..394 e-value: 8.8E-11 score: 39.3 coord: 291..324 e-value: 5.4E-9 score: 33.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 288..335 e-value: 2.1E-14 score: 53.4 coord: 357..399 e-value: 1.5E-14 score: 53.9 coord: 427..476 e-value: 2.8E-12 score: 46.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 256..285 e-value: 0.0022 score: 18.1 coord: 192..215 e-value: 0.67 score: 10.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 253..287 score: 10.084454
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 358..392 score: 13.898986
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 393..427 score: 9.240434
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 323..357 score: 10.073492
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 463..498 score: 12.408249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 13.778412
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..462 score: 11.388848
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 221..342 e-value: 3.1E-31 score: 110.2 coord: 85..220 e-value: 1.1E-7 score: 33.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 345..456 e-value: 4.1E-31 score: 110.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 457..530 e-value: 2.8E-8 score: 35.5
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 35..556
None	No IPR available	PANTHER	PTHR47938:SF13	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 35..556

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002231.1	HG10002231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding