
HG10002210 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCTTCAAAAAATTTGGCCATGGACATGCAAACTCAAGAACCAAAGAAAATGGTGAAATCCCCAAGGCCATTTATGAGGAGAAAATGGACGAAGCTGGACAAAATCATTTCCTTTTCCCTTTTCTTTGTTCATATCGTTTGTGTTTTTGCACCATTTCATTTTAATTGGCGTGCATTTTGGGTTGCTTTTGCATTATATGTTATTACTGGTTTAAGCATCAGTATTTCATATCATAGAAATCTTGCACATAAGAGTTTCAAGCTTCCTAAACCGCTTGAATACTTTTTTGCTTATTGTGCAGCTCATGCACTTCAGGTTTGATAAATAAATTCCAAAATTTCTTTTTTTCTCTATTTTTCTATTTTATCTACTTAATTATTTTTCTATTTTCTTTAGGGTGATCCAATCGATTGGGTGAGTACACATAGATGTCATCATCAATTTGTCGATACAAAAAGAGATCCACATAGTCCTATGGAAGGATTTTGGTTTAGTCATATTACTTGGCTTTTCGATTCGTATAATTTGACCAAAAAAGTTTGTCCAAAATATTTTACCAATTTTCAAAAGATCGAAAGAAGCATATTTATATGGTTCTCGAAGCATGGGAGACCCGACAACGTTCGTGATTTGGAGAAGCAAACCTTCTATAGGTTTATCCATAAAACATATTTTCTTCATCACATTGCTCTTGCGATCCTACTCTATGAAGTTGGGGGACTTCCATTCCTTATATGGGGCACGGTAAAGTTTCATATATATATATATATATATATATATTATTTGGCGTCCCAACTATTTACTTTTTAAATTAAATTCATATACATTTCATGTATTCCTTTCAATAAATAACAAGTACTACTCATTTCAACAATATGTAATATGATTTATTACGAAAAGACCAATGATATGATTGTAATGCCTCAAGCCCAACAGGATTTGGAATTTTGATTTAGTATCTAACAACCTTGACATTCTCTTACATCTCTAGTAGGATGTGGTTCAGCGACGAACCAATGTGAAAGTTGAGGGAAAATGTGACTTCAAGTAGAGTAGATTATTACCTATATTAACAATGTGCATCTTCATTTTCAGTGGCGTAATTATAAGAAGTTCAAAGTTGATTGTGTTTAACTAGGAACAATCCTATGTTGAGTGATTTTCAGTTTTTTTTAAAAGCATGTTAGTGAGGACATAACATGCTAAAAGGACTTATGTTAGTTTATAGAAATGAGGCTTCATGCTTACACACAATTCAAGAAAGTACGAATGATGTTGCTAGGGTTTGCAAGGGATGTAAGAATTGTCAGGGACCATCAGGTACCAAATTAGAATTTTGAATCTTGGTCACAATTTTTAGACTTGGGACATTACCAAGATTTTTTTAGAACAAGGGTTAGTAGGTGCATCCGAACATCTCAACTAGATTGACACGTTCTTATCACCCTCATTATATTCCACGATCTAAAATATATTCAATTATTTCTTAACAAATCATGGTAAAAAGAACATATAATTCTCCTCCAATCTTGCATTTTGATAGATGTATATAAGATTTTCATTGTGTACTTAGAAATATTAACACGTTAGCTTCAAATTATATAGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTGAACTCGGTATGTCATATATGGGGAAAACGACGATGGAATACTAGAGACTTGTCAAAAAACAATTGGTAAGTGGTTCCATCATCCTTTATTTTCATTATTAAACGTAAGATATGATTTAAATAGTTAATTTTCATCCTTGATTTCTGTTTCACTATAGTAAATTGTAGCATGTTTGAAATCACTATTATTTAAGTTATTTTAACATCACTTTTTTAAGACTTAAAATATTTTTTTTAAGTACTTAGAAGGATATTTTAAATAGGCTTTAAATTGAACAATCATAAGATAGAAATTGTAAATTTTACAAAAGCTTTTATATGTAGTACATTATTGTAAATTAGAGCAAACTACTCTTTCGCTTTTTATATGTAGTATTATTTTATCAAACCAACTTAAATAATTTTTATAAAATTTATTTTCCATCAAACATATCATATAAGGGTGTTCATTGGTTGGCTAACATCGGTTTTAGGCTCAAACCGATGTCGACTACCAATAAGTCAGTTTTGAAGAGTTTGTGTTTGCCGATTGACTGAGGACCACACTAGCAATCAATGGTTTTAGTTGGTTTTGTGAATTCGAAAAAAAAAAAAGAAAAAAGAAAAGAAAAAGATCCCTGAGAATAAATTTATGGAGAGAAGGAGAGAGAAATGGAGAAGAAGAGAAAATTAAGAGGAAAAAAATACAAATAACTATTTTCTAAAAAGATAATCATAACTTAGGAAAAAAATGGTCGAAATTTTTTTACTTTGGGCATAAACAACTCTCAAAGTTTTGTTTTTTTTGTTTTTTTTTTTTTTTATCTCACACTAACAGAGATATTATCCCTCATGGATGGATAGATCTATAATCTTTTCTTTATTTAGCTAACCAATGTGAGATTTTGATATCACATTTTCAACTTTACAAATTAAATCTTGTTGAATAATTTCACACAACTCATTATTATAATATTATTCAACAACATATTCGACTAATATAAATATTCAACATAATCATATATAATGATTTTTTTTTGTCGAAGATAATTAATGTGTTTGTCATTTATTTATTATATTTCCTTTTTTGGTTTAAAGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAACAACCATCACGCTTTTCAATATTCAGCAAGGTTTGGACTTGAATGGTGGCAAATTGACTTTGGTTGGTTTGCTATTAGGTTTCTTCAAGCCATTGGAGTTGCCACAAATGTAAAATCACCCTCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA ATGAAAGCTTCAAAAAATTTGGCCATGGACATGCAAACTCAAGAACCAAAGAAAATGGTGAAATCCCCAAGGCCATTTATGAGGAGAAAATGGACGAAGCTGGACAAAATCATTTCCTTTTCCCTTTTCTTTGTTCATATCGTTTGTGTTTTTGCACCATTTCATTTTAATTGGCGTGCATTTTGGGTTGCTTTTGCATTATATGTTATTACTGGTTTAAGCATCAGTATTTCATATCATAGAAATCTTGCACATAAGAGTTTCAAGCTTCCTAAACCGCTTGAATACTTTTTTGCTTATTGTGCAGCTCATGCACTTCAGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTGAACTCGGTATGTCATATATGGGGAAAACGACGATGGAATACTAGAGACTTGTCAAAAAACAATTGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAACAACCATCACGCTTTTCAATATTCAGCAAGGTTTGGACTTGAATGGTGGCAAATTGACTTTGGTTGGTTTGCTATTAGGTTTCTTCAAGCCATTGGAGTTGCCACAAATGTAAAATCACCCTCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA ATGAAAGCTTCAAAAAATTTGGCCATGGACATGCAAACTCAAGAACCAAAGAAAATGGTGAAATCCCCAAGGCCATTTATGAGGAGAAAATGGACGAAGCTGGACAAAATCATTTCCTTTTCCCTTTTCTTTGTTCATATCGTTTGTGTTTTTGCACCATTTCATTTTAATTGGCGTGCATTTTGGGTTGCTTTTGCATTATATGTTATTACTGGTTTAAGCATCAGTATTTCATATCATAGAAATCTTGCACATAAGAGTTTCAAGCTTCCTAAACCGCTTGAATACTTTTTTGCTTATTGTGCAGCTCATGCACTTCAGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTGAACTCGGTATGTCATATATGGGGAAAACGACGATGGAATACTAGAGACTTGTCAAAAAACAATTGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAACAACCATCACGCTTTTCAATATTCAGCAAGGTTTGGACTTGAATGGTGGCAAATTGACTTTGGTTGGTTTGCTATTAGGTTTCTTCAAGCCATTGGAGTTGCCACAAATGTAAAATCACCCTCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA MKASKNLAMDMQTQEPKKMVKSPRPFMRRKWTKLDKIISFSLFFVHIVCVFAPFHFNWRAFWVAFALYVITGLSISISYHRNLAHKSFKLPKPLEYFFAYCAAHALQCVRIVVLLHITFMVNSVCHIWGKRRWNTRDLSKNNWLVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY Homology
BLAST of HG10002210 vs. NCBI nr
Match: XP_023526679.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78 Identity = 161/307 (52.44%), Postives = 175/307 (57.00%), Query Frame = 0
BLAST of HG10002210 vs. NCBI nr
Match: XP_011652980.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus] >KGN52906.1 hypothetical protein Csa_014968 [Cucumis sativus]) HSP 1 Score: 301.2 bits (770), Expect = 6.9e-78 Identity = 165/315 (52.38%), Postives = 177/315 (56.19%), Query Frame = 0
BLAST of HG10002210 vs. NCBI nr
Match: XP_022955955.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 2.0e-77 Identity = 159/307 (51.79%), Postives = 174/307 (56.68%), Query Frame = 0
BLAST of HG10002210 vs. NCBI nr
Match: XP_008454221.1 (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 5.8e-77 Identity = 160/306 (52.29%), Postives = 172/306 (56.21%), Query Frame = 0
BLAST of HG10002210 vs. NCBI nr
Match: XP_022980838.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 6.4e-76 Identity = 156/308 (50.65%), Postives = 174/308 (56.49%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy Swiss-Prot
Match: Q949X0 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2) HSP 1 Score: 201.8 bits (512), Expect = 7.4e-51 Identity = 114/290 (39.31%), Postives = 149/290 (51.38%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy Swiss-Prot
Match: P0DOW2 (Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.7e-47 Identity = 99/271 (36.53%), Postives = 133/271 (49.08%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy Swiss-Prot
Match: O65797 (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.5e-47 Identity = 100/283 (35.34%), Postives = 137/283 (48.41%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy Swiss-Prot
Match: Q9LVZ3 (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 185.7 bits (470), Expect = 5.5e-46 Identity = 107/275 (38.91%), Postives = 133/275 (48.36%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy Swiss-Prot
Match: Q9LMI3 (Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana OX=3702 GN=At1g06360 PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44 Identity = 102/280 (36.43%), Postives = 131/280 (46.79%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy TrEMBL
Match: A0A0A0KYH4 (FA_desaturase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006130 PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 3.3e-78 Identity = 165/315 (52.38%), Postives = 177/315 (56.19%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy TrEMBL
Match: A0A6J1GWI3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457789 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 9.7e-78 Identity = 159/307 (51.79%), Postives = 174/307 (56.68%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy TrEMBL
Match: A0A1S3BYW2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103494693 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77 Identity = 160/306 (52.29%), Postives = 172/306 (56.21%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy TrEMBL
Match: A0A6J1J0F3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480111 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 3.1e-76 Identity = 156/308 (50.65%), Postives = 174/308 (56.49%), Query Frame = 0
BLAST of HG10002210 vs. ExPASy TrEMBL
Match: A0A6J1DJP0 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021101 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.4e-65 Identity = 140/311 (45.02%), Postives = 162/311 (52.09%), Query Frame = 0
BLAST of HG10002210 vs. TAIR 10
Match: AT3G15850.1 (fatty acid desaturase 5 ) HSP 1 Score: 201.8 bits (512), Expect = 5.3e-52 Identity = 114/290 (39.31%), Postives = 149/290 (51.38%), Query Frame = 0
BLAST of HG10002210 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 ) HSP 1 Score: 188.7 bits (478), Expect = 4.6e-48 Identity = 100/283 (35.34%), Postives = 137/283 (48.41%), Query Frame = 0
BLAST of HG10002210 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein ) HSP 1 Score: 185.7 bits (470), Expect = 3.9e-47 Identity = 107/275 (38.91%), Postives = 133/275 (48.36%), Query Frame = 0
BLAST of HG10002210 vs. TAIR 10
Match: AT1G06360.1 (Fatty acid desaturase family protein ) HSP 1 Score: 181.4 bits (459), Expect = 7.4e-46 Identity = 102/280 (36.43%), Postives = 131/280 (46.79%), Query Frame = 0
BLAST of HG10002210 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 ) HSP 1 Score: 181.0 bits (458), Expect = 9.6e-46 Identity = 97/275 (35.27%), Postives = 129/275 (46.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|