HG10002201 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002201
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CUE domain-containing protein
Location	Chr11: 4450150 .. 4452487 (-)
RNA-Seq Expression	HG10002201
Synteny	HG10002201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCTCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCCATTCGATTCGCTGCTCCCTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGGTTTCTTCTTTCTTCCTTTTGCTTTTTTATTCACTTTGGTTTGAATTTGATAAGCTGTCCTACTCCGGTGGATGCTGATTCTTCTTCTTTTCTGCTTGTGTGTTATATGATATTTCTTGATAGGCTAGGATTATAACATGAATCTGTATAGATTTTTTTACAACAGTTGTAGACCTTGGGGGAATCATGTTATTCTCTTCTTCTTGTATATTATAGTTGAAATATCAACTAATTTGACTTGGTTGCGCCATGAAATTGGAGTGGTTCTATTCAGTTTTGATTTGTAATTCATCTATTCCGGTGTCTTGTTAGATAACCACTGCATGTATGTTATAATTAATATTTCAAGTTTGTCTTTTCCCCAAGGTTTTCTTTATCATGCTTTGATTTTTCCTTTCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGACAAATTTGGATCAAGGTATCACAGAATGCTAAGTACTGAAGGAGATGCTTCATATGTAGTTTCCTCGTTTCTGTTGGCTCATGATTTAATTATATTATGACGATGAATTCATTGCATTCAAGATTAAATCCCCCCTTCAAGAATTTGATGCATGTTTATTTCATGGAAGAGATCTAATGGGTCCCCGCCCCCCTAACTTGCTGTCCCTAGGTTGGAATCCTAATTATACCCCTGCCTTGTGCAGGTTAGAGGAGGGGTTTAAGTTCTGATTGAGATTTGAAAAACAAGAAACAGAGTTCTCATTCAGAGTACTATGCATCCATTATATTAGAATGAGATGTATTCTTTTCTCGTGTAAGAGACTAAATGCTTTGCTACCTACCCTCCTGTTTGTAGTTTGGGTTGATAAGCTTATGTTTACCGAATTGAATTGGCTGGTACGTATACATAAACAGTTGGAAAAAAACCTTAAATCTGAATTACTGGAGATAAAGCTGTATGAGGAGTTATGATCTTCTTTAATTCTTTTCTCGTTGATGCTATATTGCCCCTGATCGTTTGGTAATGTGCTTCTTTTTTTGTAGTCTGGACGTTTATTTCTATGCTTTTCAGCACTATCTATTGTAATACGTTCTTTTTGGTTCTTTTGATGAATATACAACTCTATTTCTTATTTTAAAAAAAAGGCACTATCTATTGTAAGATTGTGGTATTAATCTTGAACTTATCATGCACTTTTTCTGCTGAAAGCACTATTCTTAACCTTTTGTTGTTAGCCTTGAGCTTTTATCTCATTTCTTTTCTATAAAGATCAGTAATTCAGTGCACATTTTATAAATTTGCAGGTTCATCTGCTCACGATGGAGAGGTTGCTGCTTCTGAGAATTGTTCAGTACCAAGCAGCATTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAATGCTACCACGGTAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCTTTAGAGAACTCAATTAGTGCACATGCTGGTGTTGATGCTGCTCAAAATTTCCACAAGGTACTTCAATTTTAGTGCCCACAACTCTAAAATATTTCCACATCCTTGGGGGACAATTTTTGGATACTAATATGTTTTCTCGGAGCATTCAAAAGCAGTTAGAGTTATTTTGGTCTTATTTGCTTGTTAAACATGCTATTGCTATAAAGTAATGAGCCAGGCTTGTAAACTTATGTTCTTTTCACTGTCACTCAGGAAAACATGCAACTGAAGGAACAAATTGATGTACTGCTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTCAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGGTTAGAATAAATGTAGACCTTTTCTAAATTCTTGCCTAGTATTAACTGACCTGTTTTAAGTTCTTAAACATGTTCGTGTTAATGCAACTTTTCTGACCAGTTGAAAAAAATCCTGTCAATTTTGTTACAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGCAGCTCGATTCCAGGACGTTTCCATCCCGATGTCTTCTAG

mRNA sequence

ATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCTCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCCATTCGATTCGCTGCTCCCTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGACAAATTTGGATCAAGGTTCATCTGCTCACGATGGAGAGGTTGCTGCTTCTGAGAATTGTTCAGTACCAAGCAGCATTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAATGCTACCACGGTAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCTTTAGAGAACTCAATTAGTGCACATGCTGGTGTTGATGCTGCTCAAAATTTCCACAAGGAAAACATGCAACTGAAGGAACAAATTGATGTACTGCTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTCAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGCAGCTCGATTCCAGGACGTTTCCATCCCGATGTCTTCTAG

Coding sequence (CDS)

ATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCTCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCCATTCGATTCGCTGCTCCCTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGACAAATTTGGATCAAGGTTCATCTGCTCACGATGGAGAGGTTGCTGCTTCTGAGAATTGTTCAGTACCAAGCAGCATTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAATGCTACCACGGTAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCTTTAGAGAACTCAATTAGTGCACATGCTGGTGTTGATGCTGCTCAAAATTTCCACAAGGAAAACATGCAACTGAAGGAACAAATTGATGTACTGCTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTCAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGCAGCTCGATTCCAGGACGTTTCCATCCCGATGTCTTCTAG

Protein sequence

MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPHMDHQLLVRALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPSSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQLKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF

Homology

[Close]

BLAST of HG10002201 vs. NCBI nr
Match: XP_004152175.1 (uncharacterized protein LOC101208593 [Cucumis sativus] >KGN52939.1 hypothetical protein Csa_014914 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPHMDHQLLVR 60
           MSAVVCG+KRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHL HLFP MD QLLVR
Sbjct: 1   MSAVVCGSKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLQHLFPQMDRQLLVR 60

Query: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPSS 120
           ALEECGNDLDAAIRSLSDLCLGSAVENPV +AEPETNLDQGS A++GEVAASEN S  SS
Sbjct: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVASAEPETNLDQGSIANNGEVAASENSS--SS 120

Query: 121 ISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQLK 180
           +SLDGRKWIDLFVVEM NATTVADAKTRAARALEALENSI+A A VDAAQNFHKENMQLK
Sbjct: 121 VSLDGRKWIDLFVVEMTNATTVADAKTRAARALEALENSITARASVDAAQNFHKENMQLK 180

Query: 181 EQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTM 240
           EQI++L+RENTILKRAVAIQHERQKEFEDKNLELQHLKQ+V+QYQEQLRTLEINNYALTM
Sbjct: 181 EQIELLVRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVAQYQEQLRTLEINNYALTM 240

Query: 241 HLKQAQQSSSIPGRFHPDVF 261
           HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 HLKQAQQSSSIPGRFHPDVF 258

[Close]

BLAST of HG10002201 vs. NCBI nr
Match: XP_038896372.1 (uncharacterized protein LOC120084606 [Benincasa hispida])

HSP 1 Score: 454.9 bits (1169), Expect = 4.6e-124
Identity = 233/260 (89.62%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPHMDHQLLVR 60
           MSAVVCGTKRSFFEELPPS PIAKRLRCSTSTSPIRFAAPSHIDHLHHLFP MDHQLLV+
Sbjct: 1   MSAVVCGTKRSFFEELPPSTPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPQMDHQLLVK 60

Query: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPSS 120
           ALEECGNDLDAAIR+LSD+CLGSAVENPV +AE ETNLDQGS  ++GE AASEN S+PSS
Sbjct: 61  ALEECGNDLDAAIRNLSDMCLGSAVENPVASAELETNLDQGSFTNNGEAAASENSSIPSS 120

Query: 121 ISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQLK 180
           +SLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSI+A A VDAAQNFHKENMQLK
Sbjct: 121 VSLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSITAQARVDAAQNFHKENMQLK 180

Query: 181 EQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTM 240
           E I+VL+RENTILKRAVAIQHERQKEFEDKNLELQH KQ+V+QYQEQLRTLEINNYALTM
Sbjct: 181 EHIEVLVRENTILKRAVAIQHERQKEFEDKNLELQHFKQLVAQYQEQLRTLEINNYALTM 240

Query: 241 HLKQAQQSSSIPGRFHPDVF 261
           HLK AQQSSSIPGR HPDVF
Sbjct: 241 HLKHAQQSSSIPGRVHPDVF 260

[Close]

BLAST of HG10002201 vs. NCBI nr
Match: XP_023528958.1 (uncharacterized protein LOC111791720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 7.9e-124
Identity = 234/261 (89.66%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPV TAEPE NLDQGS A+DGE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM++A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. NCBI nr
Match: XP_022955509.1 (uncharacterized protein LOC111457514 [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 233/261 (89.27%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEE+PPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEEIPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPV TAEPE NLDQGS A+DGE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM++A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. NCBI nr
Match: XP_022955806.1 (uncharacterized protein LOC111457686 [Cucurbita moschata])

HSP 1 Score: 452.2 bits (1162), Expect = 3.0e-123
Identity = 233/261 (89.27%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPV TAEPE NLDQGS A++GE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSIANNGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM +A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMASAVDVADARSRAARALEALENSISARAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. ExPASy TrEMBL
Match: A0A0A0KVN0 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006460 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.9e-125
Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPHMDHQLLVR 60
           MSAVVCG+KRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHL HLFP MD QLLVR
Sbjct: 1   MSAVVCGSKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLQHLFPQMDRQLLVR 60

Query: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPSS 120
           ALEECGNDLDAAIRSLSDLCLGSAVENPV +AEPETNLDQGS A++GEVAASEN S  SS
Sbjct: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVASAEPETNLDQGSIANNGEVAASENSS--SS 120

Query: 121 ISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQLK 180
           +SLDGRKWIDLFVVEM NATTVADAKTRAARALEALENSI+A A VDAAQNFHKENMQLK
Sbjct: 121 VSLDGRKWIDLFVVEMTNATTVADAKTRAARALEALENSITARASVDAAQNFHKENMQLK 180

Query: 181 EQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTM 240
           EQI++L+RENTILKRAVAIQHERQKEFEDKNLELQHLKQ+V+QYQEQLRTLEINNYALTM
Sbjct: 181 EQIELLVRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVAQYQEQLRTLEINNYALTM 240

Query: 241 HLKQAQQSSSIPGRFHPDVF 261
           HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 HLKQAQQSSSIPGRFHPDVF 258

[Close]

BLAST of HG10002201 vs. ExPASy TrEMBL
Match: A0A6J1GWH1 (uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC111457514 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.5e-124
Identity = 233/261 (89.27%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEE+PPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEEIPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPV TAEPE NLDQGS A+DGE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM++A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. ExPASy TrEMBL
Match: A0A6J1GUV7 (uncharacterized protein LOC111457686 OS=Cucurbita moschata OX=3662 GN=LOC111457686 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.5e-123
Identity = 233/261 (89.27%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPV TAEPE NLDQGS A++GE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSIANNGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM +A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMASAVDVADARSRAARALEALENSISARAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. ExPASy TrEMBL
Match: A0A6J1IXF9 (uncharacterized protein LOC111480055 OS=Cucurbita maxima OX=3661 GN=LOC111480055 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.2e-123
Identity = 232/261 (88.89%), Postives = 245/261 (93.87%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLHHLFPHMDHQLLV 60
           MSAVVCGTKRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHLHHLFPHMDHQLLV
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60

Query: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPS 120
           RALEECGNDLDAAI++LSDLCLGSAVENPV TAEPE NLDQGS A+DGE AASENCSVPS
Sbjct: 61  RALEECGNDLDAAIKNLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120

Query: 121 SISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQL 180
           S+SLDGRKWIDLFVVEM +A  VADA++RAARALEALENSISA AGVDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMASAIDVADARSRAARALEALENSISARAGVDAAQNFHKENMQL 180

Query: 181 KEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALT 240
           KEQI+VLLRENTILKRAVAIQHERQKEFE KN+ LQHLKQ+V QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIGLQHLKQLVCQYQEQLRTLEINNYALT 240

Query: 241 MHLKQAQQSSSIPGRFHPDVF 261
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of HG10002201 vs. ExPASy TrEMBL
Match: A0A6J1DJ22 (uncharacterized protein LOC111020986 OS=Momordica charantia OX=3673 GN=LOC111020986 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.0e-121
Identity = 228/260 (87.69%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSHIDHLHHLFPHMDHQLLVR 60
           MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPS ID LH LFPHMDHQLL R
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSLIDQLHDLFPHMDHQLLAR 60

Query: 61  ALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVPSS 120
           ALEECGNDLDAAI+ LSDLCLGSA ENP  TAEPETNLDQGS  +DGE AASEN S PSS
Sbjct: 61  ALEECGNDLDAAIKCLSDLCLGSAAENPGATAEPETNLDQGSFVNDGEAAASENLSAPSS 120

Query: 121 ISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQLK 180
           +SLDGR+W+DLFV EMM+AT+V DA+TRAARALEALENSISA AG DA QNFHKEN+QLK
Sbjct: 121 VSLDGREWVDLFVREMMSATSVDDARTRAARALEALENSISARAGADAVQNFHKENIQLK 180

Query: 181 EQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTM 240
           EQI+VL+RENTILKRAV+IQHERQKEF+DKNLELQHLKQ+VSQYQEQLRTLEINNYALTM
Sbjct: 181 EQIEVLIRENTILKRAVSIQHERQKEFDDKNLELQHLKQLVSQYQEQLRTLEINNYALTM 240

Query: 241 HLKQAQQSSSIPGRFHPDVF 261
           HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 HLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of HG10002201 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein )

HSP 1 Score: 272.7 bits (696), Expect = 3.0e-73
Identity = 152/275 (55.27%), Postives = 198/275 (72.00%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRLRCSTSTSPIRFAAPSH------IDHLHHLFPHM 60
           MSA+VCG KRS FE+L   SPP++K+LRC +S+S  RF+ P        +DHL  +FP M
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 60

Query: 61  DHQLLVRALEECGNDLDAAIRSLSDLCLGSAVEN--------PVTTAEPETNLDQGSSAH 120
           D Q+L RA+EECG+DLD+AIR L+ L L SA +N        PV   EP     Q  SA 
Sbjct: 61  DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSAK 120

Query: 121 DGEVAASENCSVPSSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAG 180
           +           P+ ++LDG +W++LFV EMMNA+ + DAK RAARALEALE SI+A  G
Sbjct: 121 E----------EPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTG 180

Query: 181 VDAAQNFHKENMQLKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQ 240
            DA QN  +ENM LK+Q++ +++EN++LKRAV  Q +RQ+E ED++ ELQHL+Q+V+QYQ
Sbjct: 181 TDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQ 240

Query: 241 EQLRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF 261
           EQLRTLE+NNYALT+HLKQAQQ+SSIPGR+HPDVF
Sbjct: 241 EQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 264

[Close]

BLAST of HG10002201 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein )

HSP 1 Score: 271.6 bits (693), Expect = 6.8e-73
Identity = 153/275 (55.64%), Postives = 198/275 (72.00%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRLRCSTSTSPIRFAAPSH------IDHLHHLFPHM 60
           MSA+VCG KRS FE+L   SPP++K+LRC +S+S  RF+ P        +DHL  +FP M
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 60

Query: 61  DHQLLVRALEECGNDLDAAIRSLSDLCLGSAVEN--------PVTTAEPETNLDQGSSAH 120
           D Q+L RA+EECG+DLD+AIR L+ L L SA +N        PV   EP     Q     
Sbjct: 61  DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQ----- 120

Query: 121 DGEVAASENCSVPSSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAG 180
            G  A  E    P+ ++LDG +W++LFV EMMNA+ + DAK RAARALEALE SI+A  G
Sbjct: 121 QGRSAKEE----PNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTG 180

Query: 181 VDAAQNFHKENMQLKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQ 240
            DA QN  +ENM LK+Q++ +++EN++LKRAV  Q +RQ+E ED++ ELQHL+Q+V+QYQ
Sbjct: 181 TDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQ 240

Query: 241 EQLRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF 261
           EQLRTLE+NNYALT+HLKQAQQ+SSIPGR+HPDVF
Sbjct: 241 EQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265

[Close]

BLAST of HG10002201 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 3.3e-51
Identity = 120/262 (45.80%), Postives = 168/262 (64.12%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRC-STSTSPIRFAAP-SHIDHLHHLFPHMDHQLL 60
           MSAV CGTKRS+F++   SPP +KR RC S S SPI  + P S +D LH  FPH++  +L
Sbjct: 1   MSAVYCGTKRSYFDD-NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVL 60

Query: 61  VRALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDGEVAASENCSVP 120
           V+ALE+ G+D +AA++SL             ++ E +        A   E  A    + P
Sbjct: 61  VKALEDNGSDFNAAMKSLYSF---------ASSEEKKAEELAAGGAATQETDAVCGGNPP 120

Query: 121 SSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVDAAQNFHKENMQ 180
           +S    G  W++L V E++ ++   DAK RAAR LEALE  +SA A  +A   F +E + 
Sbjct: 121 TS----GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVA 180

Query: 181 LKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYAL 240
           +++Q++ L+++NT+LKRAVAIQHERQK  ED N +L  LKQ+V QYQE+LR LE+NNYAL
Sbjct: 181 VQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYAL 240

Query: 241 TMHLKQAQQSSSIPGRFHPDVF 261
            M L+Q +  +S+P RF+PDVF
Sbjct: 241 RMQLQQVEHGNSMPARFNPDVF 248

[Close]

BLAST of HG10002201 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). )

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-49
Identity = 121/273 (44.32%), Postives = 169/273 (61.90%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRC-STSTSPIRFAAP-SHIDHLHHLFPHMD---- 60
           MSAV CGTKRS+F++   SPP +KR RC S S SPI  + P S +D LH  FPH++    
Sbjct: 1   MSAVYCGTKRSYFDD-NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVA 60

Query: 61  -------HQLLVRALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPETNLDQGSSAHDG 120
                   Q+LV+ALE+ G+D +AA++SL             ++ E +        A   
Sbjct: 61  SKIHVSVAQVLVKALEDNGSDFNAAMKSLYSF---------ASSEEKKAEELAAGGAATQ 120

Query: 121 EVAASENCSVPSSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAGVD 180
           E  A    + P+S    G  W++L V E++ ++   DAK RAAR LEALE  +SA A  +
Sbjct: 121 ETDAVCGGNPPTS----GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREE 180

Query: 181 AAQNFHKENMQLKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQ 240
           A   F +E + +++Q++ L+++NT+LKRAVAIQHERQK  ED N +L  LKQ+V QYQE+
Sbjct: 181 AGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEK 240

Query: 241 LRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF 261
           LR LE+NNYAL M L+Q +  +S+P RF+PDVF
Sbjct: 241 LRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 259

[Close]

BLAST of HG10002201 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein )

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-36
Identity = 93/195 (47.69%), Postives = 122/195 (62.56%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRLRCSTSTSPIRFAAPSH------IDHLHHLFPHM 60
           MSA+VCG KRS FE+L   SPP++K+LRC +S+S  RF+ P        +DHL  +FP M
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 60

Query: 61  DHQLLVRALEECGNDLDAAIRSLSDLCLGSAVEN--------PVTTAEPETNLDQGSSAH 120
           D Q+L RA+EECG+DLD+AIR L+ L L SA +N        PV   EP     Q  SA 
Sbjct: 61  DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSAK 120

Query: 121 DGEVAASENCSVPSSISLDGRKWIDLFVVEMMNATTVADAKTRAARALEALENSISAHAG 180
           +           P+ ++LDG +W++LFV EMMNA+ + DAK RAARALEALE SI+A  G
Sbjct: 121 E----------EPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTG 180

The following BLAST results are available for this feature:

BLAST of HG10002201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152175.1	1.2e-124	91.54	uncharacterized protein LOC101208593 [Cucumis sativus] >KGN52939.1 hypothetical ...	[more]
XP_038896372.1	4.6e-124	89.62	uncharacterized protein LOC120084606 [Benincasa hispida]	[more]
XP_023528958.1	7.9e-124	89.66	uncharacterized protein LOC111791720 [Cucurbita pepo subsp. pepo]	[more]
XP_022955509.1	1.3e-123	89.27	uncharacterized protein LOC111457514 [Cucurbita moschata]	[more]
XP_022955806.1	3.0e-123	89.27	uncharacterized protein LOC111457686 [Cucurbita moschata]	[more]

BLAST of HG10002201 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10002201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVN0	5.9e-125	91.54	CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006460 PE=4 SV...	[more]
A0A6J1GWH1	6.5e-124	89.27	uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1GUV7	1.5e-123	89.27	uncharacterized protein LOC111457686 OS=Cucurbita moschata OX=3662 GN=LOC1114576...	[more]
A0A6J1IXF9	7.2e-123	88.89	uncharacterized protein LOC111480055 OS=Cucurbita maxima OX=3661 GN=LOC111480055...	[more]
A0A6J1DJ22	1.0e-121	87.69	uncharacterized protein LOC111020986 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of HG10002201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32440.1	3.0e-73	55.27	Ubiquitin system component Cue protein	[more]
AT5G32440.3	6.8e-73	55.64	Ubiquitin system component Cue protein	[more]
AT1G80040.1	3.3e-51	45.80	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G80040.3	1.8e-49	44.32	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G32440.2	3.0e-36	47.69	Ubiquitin system component Cue protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 207..234
None	No IPR available	COILS	Coil	Coil	coord: 169..196
None	No IPR available	GENE3D	1.10.8.10		coord: 38..81 e-value: 8.8E-6 score: 27.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..113
None	No IPR available	PANTHER	PTHR31245:SF20	F18B13.13 PROTEIN	coord: 1..260
None	No IPR available	PANTHER	PTHR31245	UBIQUITIN SYSTEM COMPONENT CUE PROTEIN	coord: 1..260
None	No IPR available	CDD	cd14279	CUE	coord: 43..76 e-value: 6.21804E-8 score: 45.9221
IPR003892	Ubiquitin system component CUE	PFAM	PF02845	CUE	coord: 40..77 e-value: 2.8E-7 score: 30.1
IPR003892	Ubiquitin system component CUE	PROSITE	PS51140	CUE	coord: 38..84 score: 10.751753
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 41..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002201.1	HG10002201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding